Citrus Sinensis ID: 019470

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Protein Sequence
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccEEEEEEccccccHHHHccccccccEEEEEccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccHHHHHHHHHcccccEEEcccccEEccEEHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHcccccEEEEEccccccEEEEEHHEHHcccccccccccccccEEEHHHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccEHHHHHHHHHccccEEEEcccccccEEEEHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgseliyrghdsqlatdsyspkpikpwfavtQPIRYMLREQRLVFVLVGIAIATLFFTviptsypasyggarghvaisdslsyypvetyqraynprvgfgavnsggkiplglkrkglrivvtggagfvgsHLVDRLIARGDSVIVVDNFFTGRKEnvmhhfgnpnfelirhdvveplllEVDQiyhlacpaspvhykfnpvktikTNVVGTLNMLGLAKRVGARFLLTstsevygdplqhpqketywgnvnpigvrscydegKRTAETLTMDYHRGAGVEVRIARIFntygprmciddgrVVSNFVAQAlrkepltvygdgkqtrsfQFVSDLVRLTETI
Flexible Loop (DISEMBL)
mgseliyrghdsqlatdsyspkpikPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEvygdplqhpqketywgnvnpIGVRSCYDEGKRTAETltmdyhrgagVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEpltvygdgkqtrsfqfvsdlvrlteti
Low Complexity Region (SEG)
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI
Disordered region (IsUnstruct)
**********************PIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR*****
Disordered Region (DISOPRED)
******Y**********************VTQPIRYMLREQRLVFVLVGIAIATLFFTV**********************************************************RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI
Disordered Region (DISEMBL)
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI
Disordered Region (DISPRO)
********************PKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPT*****************************************SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	340	2.2.26 [Sep-21-2011]
Q8NBZ7	420	UDP-glucuronic acid decar	yes	no	0.638	0.516	0.728	3e-92
Q5R885	420	UDP-glucuronic acid decar	yes	no	0.638	0.516	0.728	3e-92
Q91XL3	420	UDP-glucuronic acid decar	yes	no	0.638	0.516	0.728	4e-92
Q5PQX0	420	UDP-glucuronic acid decar	yes	no	0.638	0.516	0.728	4e-92
Q6DF08	421	UDP-glucuronic acid decar	yes	no	0.638	0.515	0.723	2e-91
Q6GMI9	418	UDP-glucuronic acid decar	yes	no	0.638	0.519	0.718	2e-90
Q57664	305	Putative UDP-glucose 4-ep	yes	no	0.608	0.678	0.340	1e-24
Q9ZAE8	320	dTDP-glucose 4,6-dehydrat	yes	no	0.608	0.646	0.331	6e-21
P29782	328	dTDP-glucose 4,6-dehydrat	yes	no	0.632	0.655	0.306	1e-19
Q6MWV3	314	UDP-glucose 4-epimerase O	yes	no	0.597	0.646	0.322	1e-19

>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1

 Score =  338 bits (868), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
Homo sapiens (taxid: 9606)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 5

>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1

 Score =  338 bits (868), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1

 Score =  338 bits (867), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1

 Score =  338 bits (866), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 90  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct: 270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1

 Score =  335 bits (860), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 157/217 (72%), Positives = 181/217 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 91  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 150

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 151 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 210

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 211 EVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 270

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ E LTVYG G+QTR+FQ+VSDLV
Sbjct: 271 DGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVSDLV 307

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Xenopus tropicalis (taxid: 8364)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2

 Score =  332 bits (852), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/217 (71%), Positives = 179/217 (82%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 88  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 147

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 148 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 207

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+G RM ++
Sbjct: 208 EVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMN 267

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ E LTVYG G QTR+FQ+VSDLV
Sbjct: 268 DGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLV 304

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 19/226 (8%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTGGAGF+GSH+VD+LI     VI++DN  TG K N+     NP  E +  D+ +  L
Sbjct: 2   ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDL 56

Query: 179 LE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARFLLTST 230
            E      V+ + H A   +  +   NPV     NV+GT+N+L + ++  +      +S 
Sbjct: 57  DEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSG 116

Query: 231 SEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
             VYG+P   P  E +     PI   S Y   K   E     Y+R  G+E  I R  N Y
Sbjct: 117 GAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVY 171

Query: 291 GPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           G R     +  V+S F+ + L+ +   ++GDG QTR F +V D+ +
Sbjct: 172 GERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAK 217

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2

 Score =  102 bits (253), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 31/238 (13%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGD--------SVIVVDNF-FTGRKENVMHHFGNPNFE 167
           ++I+VTGGAGF+GSH V  LI+ GD         V VVD   + G   N+     +P F 
Sbjct: 1   MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFS 59

Query: 168 LIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKT---IKTNVVGTLNMLGLAK 219
            +R D+     +E L+   D + H A   +  H   + V +   + +N+VGT  +L  A 
Sbjct: 60  FVRGDICDEGLIEGLMARHDTVAHFA---AETHVDRSVVASGPFVASNLVGTQVLLDAAL 116

Query: 220 R--VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 277
           R  +G RFL  ST EVYG           W   +P+   S Y   K  ++ L + YH+  
Sbjct: 117 RHHIG-RFLHVSTDEVYGS-----IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTH 170

Query: 278 GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           G++V + R  N YGPR   +  +++  FV + L    + VYGDG+  R +  VSD  R
Sbjct: 171 GMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCR 226

Probably involved in the biosynthesis of the acarviose moiety of the alpha-glucosidase inhibitor acarbose. Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction.

Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) (taxid: 134676)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 6

>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1 SV=1

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 17/232 (7%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG---DSVIVVDNFFT--GRKENVMHHFGNPNFELIRHDV 173
           ++VTG AGF+GS  V  L+  G   D V+   +  T  G  +N+    G+P +   R D+
Sbjct: 5   LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64

Query: 174 VEP----LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
            +     ++   DQ+ HLA  +       +    ++TNV GT  +L  A R G A F+  
Sbjct: 65  CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           ST EVYG  L+H      W    P+   S Y   K + + L + +H   G++VR+ R  N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179

Query: 289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI 340
            YGPR   +  +++  F+   +    + +YGDG   R +  V D VR  E +
Sbjct: 180 NYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAV 229

Involved in the biosynthesis of the streptose moiety of streptomycin. Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction.

Streptomyces griseus (taxid: 1911)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 6

>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3 SV=1

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 103/217 (47%), Gaps = 14/217 (6%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +R +VTG AGF+GS LVDRL+A G SV+ +DNF TGR  N+ H   N     +  D+V  
Sbjct: 1   MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTA 60

Query: 177 LLLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
            L  +      + ++HLA          +P      NV+GT+ +   A++ G R ++ ++
Sbjct: 61  DLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTS 120

Query: 231 S--EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           S   +YG P ++P  ET      P    S Y  GK   E     +    G++       N
Sbjct: 121 SGGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPAN 175

Query: 289 TYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQT 324
            YGPR     +  VV+ F    L  +P  V+GDG  T
Sbjct: 176 VYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNT 212

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
213950353	442	UDP-glucuronic acid decarboxylase 2 [Gos	0.982	0.755	0.862	1e-167
356535177	427	PREDICTED: UDP-glucuronic acid decarboxy	0.961	0.765	0.850	1e-159
449469078	435	PREDICTED: UDP-glucuronic acid decarboxy	0.964	0.754	0.837	1e-157
60932254	443	UDP-glucuronic acid decarboxylase 2 [Pop	0.970	0.744	0.834	1e-157
118481067	443	unknown [Populus trichocarpa]	0.970	0.744	0.831	1e-156
224131118	442	predicted protein [Populus trichocarpa]	0.964	0.742	0.822	1e-156
15229334	445	UDP-glucuronic acid decarboxylase [Arabi	0.970	0.741	0.814	1e-155
297817618	445	UDP-glucuronic acid decarboxylase 2 [Ara	0.970	0.741	0.817	1e-155
13605583	445	AT3g62830/F26K9_260 [Arabidopsis thalian	0.970	0.741	0.811	1e-154
48093465	446	putative UDP-glucuronate decarboxylase 3	0.982	0.748	0.778	1e-154

>gi|213950353|gb|ACJ54441.1| UDP-glucuronic acid decarboxylase 2 [Gossypium hirsutum]

 Score =  592 bits (1526), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 289/335 (86%), Positives = 306/335 (91%), Gaps = 1/335 (0%)

Query: 1   MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVI 60
           MGSELIYRGH++QLA+DSYSPKP+KPW +VT+ +RYMLREQRL+FVLVGIAIATL F V 
Sbjct: 1   MGSELIYRGHETQLASDSYSPKPVKPWASVTRVVRYMLREQRLLFVLVGIAIATLVFNVF 60

Query: 61  PTSYPASYGGARGHVAISDSLSYYPVETYQR-AYNPRVGFGAVNSGGKIPLGLKRKGLRI 119
           P    A          + DS+ Y+P+ET  + +Y  R+GFG+ N  GKIPLGLKRKGLRI
Sbjct: 61  PAPRAAHGPHLHSTTPLLDSIPYFPIETQNKFSYAHRLGFGSGNPTGKIPLGLKRKGLRI 120

Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL 179
           VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL
Sbjct: 121 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL 180

Query: 180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ 239
           EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ
Sbjct: 181 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ 240

Query: 240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG 299
           HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG
Sbjct: 241 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG 300

Query: 300 RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           RVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 301 RVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 335

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535177|ref|XP_003536125.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 284/334 (85%), Positives = 302/334 (90%), Gaps = 7/334 (2%)

Query: 1   MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVI 60
           MGSELI+RGH++Q   DSYSPKP KPWF VT+PI YMLREQRLVFVLVG+ IATLFFT++
Sbjct: 1   MGSELIFRGHEAQPVDDSYSPKPHKPWFTVTRPIHYMLREQRLVFVLVGVIIATLFFTLV 60

Query: 61  PTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIV 120
           P+S  +S          S  +SY+  E+   AY+ RV   AV+S GK+PLG+KRKGLRIV
Sbjct: 61  PSSSSSSVPYE------SLPISYFERESKIPAYHHRVA-AAVHSVGKVPLGIKRKGLRIV 113

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE 180
           VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP FELIRHDVVEPLLLE
Sbjct: 114 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLE 173

Query: 181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH 240
           VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH
Sbjct: 174 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQH 233

Query: 241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR 300
           PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC+DDGR
Sbjct: 234 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGR 293

Query: 301 VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           VVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 294 VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469078|ref|XP_004152248.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus] gi|449484279|ref|XP_004156838.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus]

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 283/338 (83%), Positives = 298/338 (88%), Gaps = 10/338 (2%)

Query: 1   MGSELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           MGSELI+RGHD +Q A D+YSPKP KPW +VT+PIRYMLREQRLVFVLVGIAIAT  FT+
Sbjct: 1   MGSELIFRGHDETQPAADAYSPKPPKPWLSVTRPIRYMLREQRLVFVLVGIAIATFVFTL 60

Query: 60  IPTSYPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGA---VNSGGKIPLGLKRKG 116
            P+S   S     G+  I   L+ +   +   +Y  R GF     +NSGGKIPLGLKRKG
Sbjct: 61  FPSSNSPS---RVGYDPIPTELARW---SNTPSYEHRAGFQVHRVMNSGGKIPLGLKRKG 114

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLI RGDSVIVVDNFFTGRKENVMHHFGNP FELIRHDVVEP
Sbjct: 115 LRIVVTGGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEP 174

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 175 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 234

Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
           PLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA V+VRIARIFNTYGPRMCI
Sbjct: 235 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGADVQVRIARIFNTYGPRMCI 294

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ+VSDLV
Sbjct: 295 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLV 332

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60932254|gb|AAX37335.1| UDP-glucuronic acid decarboxylase 2 [Populus tomentosa]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 283/339 (83%), Positives = 301/339 (88%), Gaps = 9/339 (2%)

Query: 3   SELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIP 61
           SELI+RGHD +Q A+D+YSPKP KPW AVT+PIRY+L EQRLVF+LVGIAIATLFFT++P
Sbjct: 4   SELIFRGHDETQPASDAYSPKPPKPWLAVTRPIRYLLLEQRLVFILVGIAIATLFFTLLP 63

Query: 62  TSYPASYGGARGHVAISDSLSYYPVETYQ----RAYNP-RVGFGAVNSGGKIPLGLKRKG 116
           +S  +S      H  I ++ S++  E       + Y P RVGF + NSGGKIPLGLK K 
Sbjct: 64  SSSSSS---PYEHDPIPNTFSHFSHELTAPMRYKYYEPLRVGFQSANSGGKIPLGLKSKS 120

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF NP FELIRHDVVEP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFKNPRFELIRHDVVEP 180

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 181 LLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 240

Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
           PLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI
Sbjct: 241 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 300

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           DDGRVVSNFVAQALRKEP+TVYGDGKQTRSFQFVSDLV 
Sbjct: 301 DDGRVVSNFVAQALRKEPMTVYGDGKQTRSFQFVSDLVE 339

Source: Populus tomentosa

Species: Populus tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481067|gb|ABK92487.1| unknown [Populus trichocarpa]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 282/339 (83%), Positives = 299/339 (88%), Gaps = 9/339 (2%)

Query: 3   SELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIP 61
           SELI+RGHD +Q A+D+YSPKP KPW AVT+PIRY+L EQRLVF+LVGIAIATLFFTV+P
Sbjct: 4   SELIFRGHDETQPASDAYSPKPPKPWLAVTRPIRYLLLEQRLVFILVGIAIATLFFTVLP 63

Query: 62  TSYPASYGGARGHVAISDSLSYYPVETYQ----RAYNP-RVGFGAVNSGGKIPLGLKRKG 116
           +S  +S      H  I ++ S++  E       + Y P RVG  + NSGGKIPLGLK K 
Sbjct: 64  SSSSSS---PYEHDPIPNTFSHFSHELTTPMRYKYYEPLRVGLQSANSGGKIPLGLKSKS 120

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH  NP FELIRHDVVEP
Sbjct: 121 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHLKNPRFELIRHDVVEP 180

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 181 LLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 240

Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
           PLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI
Sbjct: 241 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 300

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           DDGRVVSNFVAQALRKEP+TVYGDGKQTRSFQFVSDLV 
Sbjct: 301 DDGRVVSNFVAQALRKEPMTVYGDGKQTRSFQFVSDLVE 339

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131118|ref|XP_002321005.1| predicted protein [Populus trichocarpa] gi|118484863|gb|ABK94298.1| unknown [Populus trichocarpa] gi|222861778|gb|EEE99320.1| predicted protein [Populus trichocarpa]

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/338 (82%), Positives = 297/338 (87%), Gaps = 10/338 (2%)

Query: 3   SELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIP 61
           SELI+RGHD +Q   D+YSPKP KPW  V +P+RY+LRE+RLVF LVG+AIAT+FFT++P
Sbjct: 4   SELIFRGHDETQPTPDAYSPKPAKPWLFVIRPVRYLLREKRLVFFLVGMAIATVFFTILP 63

Query: 62  TSYPASYGGARGHVAISDSLSYYPVETYQ----RAYNP-RVGFGAVNSGGKIPLGLKRKG 116
           +S P     A  +  + DS S+   E       + Y P +VGF + NSGGKIPLGLKRKG
Sbjct: 64  SSSPH----AHKYDPLPDSFSHISHELTTPVRYKYYEPLQVGFQSANSGGKIPLGLKRKG 119

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF NP FELIRHDVVEP
Sbjct: 120 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFKNPRFELIRHDVVEP 179

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           LLLEVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 180 LLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 239

Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
           PLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMCI
Sbjct: 240 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCI 299

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DDGRVVSNFVAQALRKEP+TVYGDGKQTRSFQFVSDLV
Sbjct: 300 DDGRVVSNFVAQALRKEPMTVYGDGKQTRSFQFVSDLV 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229334|ref|NP_191842.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|186511349|ref|NP_001118893.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|7362763|emb|CAB83133.1| dTDP-glucose 4-6-dehydratase homolog D18 [Arabidopsis thaliana] gi|23505953|gb|AAN28836.1| At3g62830/F26K9_260 [Arabidopsis thaliana] gi|332646877|gb|AEE80398.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|332646878|gb|AEE80399.1| UDP-glucuronic acid decarboxylase [Arabidopsis thaliana]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/340 (81%), Positives = 293/340 (86%), Gaps = 10/340 (2%)

Query: 1   MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M SELI R H++ Q   D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 60  IPTSYPAS-YGGARGHVAISDSLSYYPVETYQRA----YNPRVGFGAVNSGGKIPLGLKR 114
            P S  ++ Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIG----ATGGKIPLGLKR 116

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
           GDPLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRM
Sbjct: 237 GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 296

Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV
Sbjct: 297 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817618|ref|XP_002876692.1| UDP-glucuronic acid decarboxylase 2 [Arabidopsis lyrata subsp. lyrata] gi|297322530|gb|EFH52951.1| UDP-glucuronic acid decarboxylase 2 [Arabidopsis lyrata subsp. lyrata]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 278/340 (81%), Positives = 293/340 (86%), Gaps = 10/340 (2%)

Query: 1   MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M +ELI R H++ Q   D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1   MANELINRRHEADQPIADAYYPKPIKPWFMVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 60  IPTSYPAS-YGGARGHVAISDSLSYYPVETYQRA----YNPRVGFGAVNSGGKIPLGLKR 114
            P S  +S Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct: 61  FPRSTQSSAYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIG----ATGGKIPLGLKR 116

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFELIRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFELIRHDVV 176

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
           GDPLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRM
Sbjct: 237 GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 296

Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV
Sbjct: 297 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 336

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13605583|gb|AAK32785.1|AF361617_1 AT3g62830/F26K9_260 [Arabidopsis thaliana] gi|14595664|gb|AAK70881.1|AF387788_1 UDP-glucuronic acid decarboxylase [Arabidopsis thaliana] gi|928932|emb|CAA89205.1| homolog of dTDP-glucose 4-6-dehydratases [Arabidopsis thaliana] gi|1585435|prf||2124427B diamide resistance gene

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/340 (81%), Positives = 293/340 (86%), Gaps = 10/340 (2%)

Query: 1   MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M SELI R H++ Q   D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct: 1   MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query: 60  IPTSYPAS-YGGARGHVAISDSLSYYPVETYQRA----YNPRVGFGAVNSGGKIPLGLKR 114
            P S  ++ Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct: 61  FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIG----ATGGKIPLGLKR 116

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct: 177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
           GDPLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG+ VEVRIARIFNTYGPRM
Sbjct: 237 GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGSNVEVRIARIFNTYGPRM 296

Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV
Sbjct: 297 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 336

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|48093465|gb|AAT40109.1| putative UDP-glucuronate decarboxylase 3 [Nicotiana tabacum]

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/343 (77%), Positives = 296/343 (86%), Gaps = 9/343 (2%)

Query: 1   MGSELIYRGHDSQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVI 60
           M SEL +RG ++    ++Y+PKP KPW  V +P+ YML+E+RLVF+  GIAIA+L F ++
Sbjct: 1   MASELFFRGQETHHIINAYTPKPRKPWQNVIRPVHYMLKEKRLVFLFAGIAIASLIFAML 60

Query: 61  PTSYPASYGGARGHVAISDSLSYYPVET---------YQRAYNPRVGFGAVNSGGKIPLG 111
           P+S   S  G+  ++  +   S+ P E+         ++  Y  R G G+++SGGKIPLG
Sbjct: 61  PSSRAPSGQGSYSYINNAIYDSHLPSESTHSHSIARAHRIIYQNRAGLGSLHSGGKIPLG 120

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH 171
           L+RKGLRI+VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP FELIRH
Sbjct: 121 LQRKGLRILVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRH 180

Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 231
           DVVEPLL+EVDQIYHLACPASPVHYK NPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS
Sbjct: 181 DVVEPLLVEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 240

Query: 232 EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
           EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG
Sbjct: 241 EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 300

Query: 292 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV
Sbjct: 301 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 343

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
TAIR|locus:2081675	445	AUD1 "AT3G62830" [Arabidopsis	0.970	0.741	0.814	2e-143
TAIR|locus:2053275	343	UXS6 "UDP-XYL synthase 6" [Ara	0.65	0.644	0.756	4.6e-89
TAIR|locus:2078206	341	UXS5 "UDP-XYL synthase 5" [Ara	0.65	0.648	0.752	5.9e-89
TAIR|locus:2168539	357	UXS3 "UDP-glucuronic acid deca	0.641	0.610	0.757	1.2e-88
UNIPROTKB|E1BMI4	420	UXS1 "Uncharacterized protein"	0.638	0.516	0.732	1.7e-84
UNIPROTKB|F1PU61	414	UXS1 "Uncharacterized protein"	0.638	0.524	0.728	1.7e-84
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.638	0.597	0.728	1.7e-84
UNIPROTKB|Q8NBZ7	420	UXS1 "UDP-glucuronic acid deca	0.638	0.516	0.728	1.7e-84
TIGR_CMR|GSU_1815	311	GSU_1815 "NAD-dependent epimer	0.641	0.700	0.720	1.7e-84
MGI|MGI:1915133	420	Uxs1 "UDP-glucuronate decarbox	0.638	0.516	0.728	1.7e-84

TAIR|locus:2081675 AUD1 "AT3G62830" [Arabidopsis thaliana (taxid:3702)]

 Score = 1402 (498.6 bits), Expect = 2.0e-143, P = 2.0e-143
 Identities = 277/340 (81%), Positives = 293/340 (86%)

Query:     1 MGSELIYRGHDSQLAT-DSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
             M SELI R H++   T D+Y PKPIKPWF VT+P+RYMLREQRL+FVLVGIAIATL FT+
Sbjct:     1 MASELINRRHETDQPTADAYYPKPIKPWFTVTRPMRYMLREQRLIFVLVGIAIATLVFTI 60

Query:    60 IPTSYPAS-YGGARGHVAISDSLSYYPVETYQRA----YNPRVGFGAVNSGGKIPLGLKR 114
              P S  ++ Y        I    SY P    QR     Y  R+G     +GGKIPLGLKR
Sbjct:    61 FPRSTQSTPYSDPFSGYGIRPDESYVPAIQAQRKPSLEYLNRIGA----TGGKIPLGLKR 116

Query:   115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
             KGLR+VVTGGAGFVGSHLVDRL+ARGD+VIVVDNFFTGRKENVMHHF NPNFE+IRHDVV
Sbjct:   117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVV 176

Query:   175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
             EP+LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY
Sbjct:   177 EPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 236

Query:   235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
             GDPLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRM
Sbjct:   237 GDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 296

Query:   295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV
Sbjct:   297 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 336

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0042732 "D-xylose metabolic process" evidence=IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2053275 UXS6 "UDP-XYL synthase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
 Identities = 168/222 (75%), Positives = 189/222 (85%)

Query:   114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
             +  +RI+VTGGAGF+GSHLVD+L+    + VIV DN+FTG K+N+    G+P FELIRHD
Sbjct:    28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87

Query:   173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
             V EPL +EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct:    88 VTEPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 147

Query:   233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
             VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGP
Sbjct:   148 VYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 207

Query:   293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             RM IDDGRVVSNF+AQALR E LTV   G QTRSF +VSD+V
Sbjct:   208 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMV 249

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2078206 UXS5 "UDP-XYL synthase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 167/222 (75%), Positives = 190/222 (85%)

Query:   114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
             +  +RI+++GGAGF+GSHLVD+L+    + VIV DN+FTG K+N+    G+P FELIRHD
Sbjct:    26 QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85

Query:   173 VVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
             V EPLL+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct:    86 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 145

Query:   233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
             VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGP
Sbjct:   146 VYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 205

Query:   293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             RM IDDGRVVSNF+AQALR E LTV   G QTRSF +VSD+V
Sbjct:   206 RMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMV 247

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA;TAS

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2168539 UXS3 "UDP-glucuronic acid decarboxylase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 166/219 (75%), Positives = 189/219 (86%)

Query:   117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
             +RI+++GGAGF+GSHLVD+L+    + V+V DN+FTG KEN+    G+P FELIRHDV E
Sbjct:    45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTE 104

Query:   176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
             PLL+EVD+IYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYG
Sbjct:   105 PLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 164

Query:   236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
             DPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGPRM 
Sbjct:   165 DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 224

Query:   296 IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             IDDGRVVSNF+AQALR E LTV   G QTRSF +VSD+V
Sbjct:   225 IDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMV 263

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0042732 "D-xylose metabolic process" evidence=RCA;IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

UNIPROTKB|E1BMI4 UXS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 159/217 (73%), Positives = 181/217 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI+VTGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    90 RILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query:   238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
               HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct:   210 EVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query:   298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct:   270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1PU61 UXS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    84 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 143

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   144 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 203

Query:   238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
               HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct:   204 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 263

Query:   298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct:   264 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 300

GO:0005739 "mitochondrion" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    33 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 92

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:    93 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 152

Query:   238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
               HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct:   153 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 212

Query:   298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct:   213 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 249

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query:   238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
               HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct:   210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query:   298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct:   270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033320 "UDP-D-xylose biosynthetic process" evidence=IEA

TIGR_CMR|GSU_1815 GSU_1815 "NAD-dependent epimerase/dehydratase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 157/218 (72%), Positives = 183/218 (83%)

Query:   117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
             +RI+VTGGAGF+GSHL +RL+ +G  V+ +DNFFTG K N+        FE+IRHD++EP
Sbjct:     1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIEP 60

Query:   177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
             +LLEVD+IY+LACPASPVHY++NPVKTIKT+V+GT+NMLGLAKRV AR L  STSEVYGD
Sbjct:    61 ILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYGD 120

Query:   237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
             P  HPQ E+YWGNVNPIG+RSCYDEGKR AETL MDYHR  GV++RIARIFNTYGPRM  
Sbjct:   121 PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMAE 180

Query:   297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
              DGRVVSNFV QALR E LTVYGDG QTRSF +V DL+
Sbjct:   181 HDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLL 218

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=ISS

GO:0016857 "racemase and epimerase activity, acting on carbohydrates and derivatives" evidence=ISS

MGI|MGI:1915133 Uxs1 "UDP-glucuronate decarboxylase 1" [Mus musculus (taxid:10090)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 158/217 (72%), Positives = 181/217 (83%)

Query:   118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
             RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct:    90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 149

Query:   178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
              +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct:   150 YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 209

Query:   238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
               HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct:   210 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 269

Query:   298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct:   270 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 306

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISO

GO:0050662 "coenzyme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q91XL3	UXS1_MOUSE	4, ., 1, ., 1, ., 3, 5	0.7281	0.6382	0.5166	yes	no
Q5R885	UXS1_PONAB	4, ., 1, ., 1, ., 3, 5	0.7281	0.6382	0.5166	yes	no
Q8NBZ7	UXS1_HUMAN	4, ., 1, ., 1, ., 3, 5	0.7281	0.6382	0.5166	yes	no
Q6GMI9	UXS1_DANRE	4, ., 1, ., 1, ., 3, 5	0.7188	0.6382	0.5191	yes	no
Q5PQX0	UXS1_RAT	4, ., 1, ., 1, ., 3, 5	0.7281	0.6382	0.5166	yes	no
Q6DF08	UXS1_XENTR	4, ., 1, ., 1, ., 3, 5	0.7235	0.6382	0.5154	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	340
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	0.0
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	0.0
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-161
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-58
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	3e-53
cd08946	200	cd08946, SDR_e, extended (e) SDRs	5e-51
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	2e-44
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-44
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	7e-44
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	5e-39
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	4e-35
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	3e-33
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	4e-31
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	2e-30
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	1e-29
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	2e-28
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	9e-28
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	2e-27
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	2e-23
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	9e-22
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	1e-21
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	3e-21
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	7e-21
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	3e-20
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	6e-19
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	5e-18
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	1e-16
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	7e-16
PLN02427	386	PLN02427, PLN02427, UDP-apiose/xylose synthase	2e-15
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	3e-15
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-14
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	4e-14
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	5e-13
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	1e-12
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	1e-12
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	1e-12
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	1e-11
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	1e-11
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	1e-11
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	1e-11
PRK11908	347	PRK11908, PRK11908, NAD-dependent epimerase/dehydr	1e-11
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	5e-11
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	9e-11
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	1e-10
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	3e-10
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	3e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	6e-10
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	1e-09
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	2e-09
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	8e-09
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-08
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	1e-08
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	2e-08
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	4e-08
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	5e-08
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	8e-08
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	2e-07
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-07
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	4e-07
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-06
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-06
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	3e-06
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-06
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	5e-06
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	7e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	9e-06
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	4e-05
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	4e-05
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-05
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	6e-05
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	6e-05
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-04
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	2e-04
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	3e-04
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	4e-04
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	5e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	5e-04
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	6e-04
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	8e-04
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	8e-04
PRK08125	660	PRK08125, PRK08125, bifunctional UDP-glucuronic ac	0.001
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	0.002
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	0.004

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score =  627 bits (1619), Expect = 0.0
 Identities = 285/346 (82%), Positives = 296/346 (85%), Gaps = 9/346 (2%)

Query: 1   MGSELIYRGHD-SQLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTV 59
           M SELI R H+ +Q   D+Y PKPIKPWF VT+PIRYMLREQRLVFVLVGIAIATL FT+
Sbjct: 1   MASELINRRHEETQPTADAYYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTI 60

Query: 60  IPTS---YPASYGGARGHVAISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKG 116
            P+S    P S     G+    D  SY P    QR  +        NSGGKIPLGLKRKG
Sbjct: 61  FPSSSQPSPYSVDPLSGYGIRPDE-SYVPAIQAQRKPSLEYLNRIGNSGGKIPLGLKRKG 119

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           LR+VVTGGAGFVGSHLVDRL+ARGDSVIVVDNFFTGRKENVMHHF NPNFELIRHDVVEP
Sbjct: 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP 179

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
           +LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD
Sbjct: 180 ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 239

Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
           PLQHPQ ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA VEVRIARIFNTYGPRMCI
Sbjct: 240 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCI 299

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV----RLTE 338
           DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV    RL E
Sbjct: 300 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME 345

Length = 442

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score =  510 bits (1314), Expect = 0.0
 Identities = 229/319 (71%), Positives = 265/319 (83%), Gaps = 3/319 (0%)

Query: 16  TDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHV 75
           +  YSPK +K   ++ + I Y+ +EQRL+F+LVGI I + FF + P+   +  G A    
Sbjct: 23  SSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPSL--SRLGPAESTS 80

Query: 76  AISDSLSYYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDR 135
            I+ S+S    ++   +       G   +G ++P+G+ RK LRIVVTGGAGFVGSHLVD+
Sbjct: 81  LITRSVSIAVTDSPPSSSTFNSSGGGGRTG-RVPVGIGRKRLRIVVTGGAGFVGSHLVDK 139

Query: 136 LIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH 195
           LI RGD VIV+DNFFTGRKEN++H FGNP FELIRHDVVEP+LLEVDQIYHLACPASPVH
Sbjct: 140 LIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASPVH 199

Query: 196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV 255
           YK+NPVKTIKTNV+GTLNMLGLAKRVGARFLLTSTSEVYGDPL+HPQKETYWGNVNPIG 
Sbjct: 200 YKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE 259

Query: 256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL 315
           RSCYDEGKRTAETL MDYHRGAGVEVRIARIFNTYGPRMC+DDGRVVSNFVAQ +RK+P+
Sbjct: 260 RSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPM 319

Query: 316 TVYGDGKQTRSFQFVSDLV 334
           TVYGDGKQTRSFQ+VSDLV
Sbjct: 320 TVYGDGKQTRSFQYVSDLV 338

Length = 436

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score =  451 bits (1163), Expect = e-161
 Identities = 171/217 (78%), Positives = 188/217 (86%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGF+GSHL DRL+  G  VI VDNFFTGRK N+ H  G+PNFE IRHDV EPL
Sbjct: 2   RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTEPL 61

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            LEVDQIYHLACPASPVHY++NP+KT+KTNV+GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 62  YLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARVLLASTSEVYGDP 121

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E+YWGNVNPIG RSCYDEGKR AETL M YHR  GV+VRIARIFNTYGPRM  +
Sbjct: 122 EVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMHPN 181

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QALR EP+TVYGDG QTRSFQ+VSDLV
Sbjct: 182 DGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSDLV 218

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  190 bits (485), Expect = 2e-58
 Identities = 94/227 (41%), Positives = 130/227 (57%), Gaps = 17/227 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           R++VTGGAGF+GSHLV+RL+ RG  VIV+DN  TG+KEN+      PN + I  D+    
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEV--KPNVKFIEGDIRDDE 58

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            VE     VD ++H A  AS      +P+K  + NV+GTLN+L  A++ G  RF+  S+S
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFVYASSS 118

Query: 232 EVYGDPLQHPQKETYWGN-VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
            VYGDP   P+ E +  N ++P  V       K   E     + R  G+     R FN Y
Sbjct: 119 SVYGDPPYLPKDEDHPPNPLSPYAV------SKYAGELYCQVFARLYGLPTVSLRYFNVY 172

Query: 291 GPRMCIDDGR--VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           GPR   + G   V+  F+ +AL+ EP T+YGDG+QTR F +V D+V 
Sbjct: 173 GPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVE 219

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  177 bits (450), Expect = 3e-53
 Identities = 88/225 (39%), Positives = 114/225 (50%), Gaps = 11/225 (4%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI+VTGGAGF+GSHLV+RL+A G  V  +D    G    +         +L   D+V+ L
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDEL 60

Query: 178 LLEV-DQIYHLACPASPVHYK-FNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTST-SEV 233
              V D + HLA  +S       +P + +  NV GTLN+L  A+  G  RF+  S+ S V
Sbjct: 61  AKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVV 120

Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGDP   P  E   G   P    + Y   K  AE L   Y R  G+ V I R FN YGP 
Sbjct: 121 YGDPPPLPIDEDL-GPPRP---LNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176

Query: 294 MCID-DGRVVSNFVAQALRKEPL-TVYGDGKQTRSFQFVSDLVRL 336
              D    VVS F+ Q L+ EP+  + GDG QTR F +V D+   
Sbjct: 177 DKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA 221

Length = 314

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  167 bits (426), Expect = 5e-51
 Identities = 81/220 (36%), Positives = 107/220 (48%), Gaps = 38/220 (17%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTGGAGF+GSHLV RL+ RG  V+V+D                               
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRL----------------------------- 31

Query: 179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDP 237
              D + HLA          NP +  +TNVVGTLN+L  A++ G  RF+  S++ VYG P
Sbjct: 32  ---DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSP 88

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
              P++E       P+   S Y   K  AE L   Y    G+ V I R+ N YGP     
Sbjct: 89  EGLPEEEETP--PRPL---SPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPR 143

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
              VV++F+ +AL  +PLTV+G G QTR F  V D+VR  
Sbjct: 144 LDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAI 183

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  154 bits (391), Expect = 2e-44
 Identities = 78/233 (33%), Positives = 111/233 (47%), Gaps = 17/233 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            ++VTG  GF+GSHL +RL+  G  V  +D + +     ++ +  +  F  I  DV +  
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTS 231
            +E      D ++HLA   +  +    P+  ++TNV GTLN+L  A  +   R + TSTS
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTSTS 120

Query: 232 EVYGDPLQHPQKETYWGNVNPIGV----RSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           EVYG     P  E      +P+      RS Y   K+ A+ L   Y R  G+ V I R F
Sbjct: 121 EVYGTAQDVPIDED-----HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPF 175

Query: 288 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI 340
           NTYGPR       V+   ++Q    + L   GDG  TR F FV D  R    I
Sbjct: 176 NTYGPRQ--SARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDI 226

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  151 bits (383), Expect = 3e-44
 Identities = 81/227 (35%), Positives = 105/227 (46%), Gaps = 22/227 (9%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTGG GF+GSHLV RL+  G  VI        R+                 D+ +P  
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI---VLGRRRRSES---LNTGRIRFHEGDLTDPDA 54

Query: 179 LE-------VDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
           LE        D + HLA   S V   F  P   I+ NV+GTL +L  A+R G  RF+  S
Sbjct: 55  LERLLAEVQPDAVIHLAA-QSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFAS 113

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           +SEVYGD    P  E       P+G  S Y   K  AE L   Y R  G+   I R+FN 
Sbjct: 114 SSEVYGDVADPPITEDT-----PLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNV 168

Query: 290 YGPR-MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           YGP         V+   + + L  +P+ + GDG Q R F +V D+ R
Sbjct: 169 YGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVAR 215

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  152 bits (387), Expect = 7e-44
 Identities = 82/224 (36%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI+VTGGAGF+GSHLVDRL+  G+ V+VVDN  +GR+EN+   F N  F  ++ D+++  
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTA 60

Query: 178 ----LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
                 + D ++HLA          +P   ++ NV+ T N+L   +  G  R +  S+S 
Sbjct: 61  DKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSST 120

Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
           VYG+    P  E Y     PI   S Y   K  AE L   Y    G +  I R  N  GP
Sbjct: 121 VYGEAKVIPTPEDY--PPLPI---SVYGASKLAAEALISAYAHLFGFQAWIFRFANIVGP 175

Query: 293 RMCIDDGRVVSNFVAQALRKEP--LTVYGDGKQTRSFQFVSDLV 334
           R       V+ +F+ + L++ P  L V GDG+Q +S+ +VSD V
Sbjct: 176 RS---THGVIYDFINK-LKRNPNELEVLGDGRQRKSYLYVSDCV 215

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  139 bits (354), Expect = 5e-39
 Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 21/236 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           +I+VTGGAGF+GS+ V  L+ +     +I +D   + G  EN+     +P +  ++ D+ 
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDIC 61

Query: 175 EPLLL-------EVDQIYHLACPA-SPVHYKFN-PVKTIKTNVVGTLNMLGLAKRVGA-R 224
           +  L+       ++D + H A  A S V    + P   I+TNV+GT  +L  A++ G  R
Sbjct: 62  DAELVDRLFEEEKIDAVIHFA--AESHVDRSISDPEPFIRTNVLGTYTLLEAARKYGVKR 119

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
           F+  ST EVYGD L    + T    + P    S Y   K  A+ L   YHR  G+ V I 
Sbjct: 120 FVHISTDEVYGD-LLDDGEFTETSPLAP---TSPYSASKAAADLLVRAYHRTYGLPVVIT 175

Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI 340
           R  N YGP    +  +++  F+  AL  +PL +YGDG   R + +V D  R  E +
Sbjct: 176 RCSNNYGPYQFPE--KLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHARAIELV 229

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score =  130 bits (328), Expect = 4e-35
 Identities = 70/233 (30%), Positives = 95/233 (40%), Gaps = 19/233 (8%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
            R +VTG  GF+GSHL +RL A G  V   D                   +L   +    
Sbjct: 1   QRALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDEFHLVDLREMENCLK 60

Query: 177 LLLEVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVY 234
               VD ++HLA     + Y + N    +  N +   NML  A+  G  RFL  S++ VY
Sbjct: 61  ATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSACVY 120

Query: 235 GDPLQHPQKETYWG----NVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
             P     + T       +  P   +  Y   K   E L   Y+   G+E RI R  N Y
Sbjct: 121 --PEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIVRFHNIY 178

Query: 291 GPRMCIDDGRVVSNFVAQAL-RK-------EPLTVYGDGKQTRSFQFVSDLVR 335
           GPR   D GR        A+ RK       +   ++GDG QTRSF ++ D V 
Sbjct: 179 GPRGTWDGGR---EKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVE 228

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score =  124 bits (313), Expect = 3e-33
 Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 21/229 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF------TGRKENVMHHFGNPNFELIRH 171
           R+++ GG GF+GSHLVD L+  G  V V D          G  + +   + N        
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYELPLGGVDYIKGDYENR------A 54

Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL--AKRVGARFLLTS 229
           D+    L+ +D + HLA   +P     NP+  I+TNV  T+ +L    A  +G     +S
Sbjct: 55  DLES-ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFASS 113

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
              VYG P Q P  E+      PI   S Y   K   E     Y    G++  + RI N 
Sbjct: 114 GGTVYGVPEQLPISESD--PTLPI---SSYGISKLAIEKYLRLYQYLYGLDYTVLRISNP 168

Query: 290 YGPRMCIDDGR-VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
           YGP    D  + V+   + + LR EP+ ++GDG+  R + ++ DLV   
Sbjct: 169 YGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEAL 217

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score =  119 bits (301), Expect = 4e-31
 Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 33/250 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHHFGNPNFELIRHDV 173
           R+++TGGAGF+GS+L    + +G  VI  DN       G    +  +  +     +  D+
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGDI 61

Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKF--NPVKTIKTNVVGTLNMLGLAKRVG--AR 224
                +E L  ++D I H A  A P       +P    +TN +GTLN+L  A++    A 
Sbjct: 62  RNRNDLEDLFEDIDLIIHTA--AQPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNAP 119

Query: 225 FLLTSTSEVYGD-PLQHPQKE--TYW----GNVNPIGV---------RSCYDEGKRTAET 268
           F+ TST++VYGD P   P +E  T +       +P G+          S Y   K  A+ 
Sbjct: 120 FIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAADQ 179

Query: 269 LTMDYHRGAGVEVRIARIFNTYGPR-MCIDDGRVVSNFVAQALRKEPLTVYG-DGKQTRS 326
              +Y R  G++  + R     GPR    +D   V+ F+  A+  +PLT++G  GKQ R 
Sbjct: 180 YVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQVRD 239

Query: 327 FQFVSDLVRL 336
               +DLV L
Sbjct: 240 VLHSADLVNL 249

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score =  117 bits (296), Expect = 2e-30
 Identities = 76/238 (31%), Positives = 113/238 (47%), Gaps = 23/238 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           +I+VTGGAGF+GS+ V  ++ +   D V+ +D   + G  EN+     +P +  ++ D+ 
Sbjct: 2   KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDIC 61

Query: 175 EPLLLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKR--VGAR 224
           +  L++        D + H A   S V      P   I+TNVVGT  +L  A++     R
Sbjct: 62  DRELVDRLFKEYQPDAVVHFAA-ESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFR 120

Query: 225 FLLTSTSEVYGD-PLQHPQ-KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
           F   ST EVYGD  L      ET     NP    S Y   K  ++ L   Y R  G+   
Sbjct: 121 FHHISTDEVYGDLGLDDDAFTET--TPYNP---SSPYSASKAASDLLVRAYVRTYGLPAT 175

Query: 283 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI 340
           I R  N YGP    +  +++   +  AL  +PL VYGDG Q R + +V D  R  + +
Sbjct: 176 ITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLV 231

Length = 340

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score =  115 bits (289), Expect = 1e-29
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 26/235 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVD----NFFTGRKENVMHHFGNPNFELIRHDV 173
           R ++TG  G  GS+L + L+ +G  V  +     +F T R +++  +       L   D+
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYIN--KDRITLHYGDL 58

Query: 174 VEPL-LLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK--RVGAR 224
            +   L         D+IYHLA  +       +P  T + N VGTLN+L   +   + AR
Sbjct: 59  TDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLDAR 118

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
           F   S+SE YG   + PQ ET      P   RS Y   K  A+ +T +Y    G+     
Sbjct: 119 FYQASSSEEYGKVQELPQSET-----TPFRPRSPYAVSKLYADWITRNYREAYGLFAVNG 173

Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALR----KEPLTVYGDGKQTRSFQFVSDLVR 335
           R+FN  GPR    +  V      Q  R     +P+   G+    R +    D V 
Sbjct: 174 RLFNHEGPRR--GETFVTRKITRQVARIKAGLQPVLKLGNLDAKRDWGDARDYVE 226

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score =  111 bits (279), Expect = 2e-28
 Identities = 74/234 (31%), Positives = 108/234 (46%), Gaps = 32/234 (13%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG---------NPNFELI 169
           ++VTG  GF+GSHLV+ L+ +G  V     +      N  + +G             E++
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLY------NSFNSWGWLDTSPPEVKDKIEVV 54

Query: 170 RHDVVEPLLLE-----VDQIYHLAC-PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG- 222
             D+ +P  +       D ++HLA   A P  Y   P   + TNV GTLN+L  A+ +G 
Sbjct: 55  TGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYI-APDSYVDTNVTGTLNVLQAARDLGV 113

Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
            + + TSTSEVYG     P  E +     P+  +S Y   K  A+ L + ++R     V 
Sbjct: 114 EKVVHTSTSEVYGTAQYVPIDEKH-----PLQGQSPYSASKIGADQLALSFYRSFNTPVT 168

Query: 283 IARIFNTYGPRMCIDDGR-VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           I R FNTYGPR      R V+   + Q    +     G    TR F +V+D VR
Sbjct: 169 IIRPFNTYGPR---QSARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVR 219

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  110 bits (277), Expect = 9e-28
 Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 31/237 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF----TGRKENVMHHFGNPN-FELIRHD 172
           +I+VTG AGF+G H+  RL+ RGD V+ +DN         KE  +   G    F+ ++ D
Sbjct: 2   KILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKGD 61

Query: 173 VVEPLLL-------EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGAR 224
           + +   L       E D + HLA  A  V Y   NP   + +N+VG LN+L L +  G +
Sbjct: 62  LEDREALRRLFKDHEFDAVIHLAAQAG-VRYSLENPHAYVDSNIVGFLNLLELCRHFGVK 120

Query: 225 -FLLTSTSEVYGDPLQHPQKETYWGNVN-PIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
             +  S+S VYG   + P  E     V+ PI   S Y   K+  E +   Y    G+   
Sbjct: 121 HLVYASSSSVYGLNTKMPFSED--DRVDHPI---SLYAATKKANELMAHTYSHLYGIPTT 175

Query: 283 IARIFNTYG----PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
             R F  YG    P M +        F    L  +P+ V+ DG  +R F ++ D+V 
Sbjct: 176 GLRFFTVYGPWGRPDMAL------FLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVE 226

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score =  109 bits (274), Expect = 2e-27
 Identities = 80/237 (33%), Positives = 111/237 (46%), Gaps = 22/237 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDS-VIVVDNF-FTGRKENVMHHFGNPNFELIRHDV 173
           RI+VTGGAGF+GS+ V R I     D+ VIV+D   + G  EN+     NP +  ++ D+
Sbjct: 1   RILVTGGAGFIGSNFV-RYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDI 59

Query: 174 -----VEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGAR 224
                V  L  E   D + H A  +        P   I+TNVVGT  +L   ++     R
Sbjct: 60  GDRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFR 119

Query: 225 FLLTSTSEVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           F   ST EVYGD        ET      P+   S Y   K  ++ L   YHR  G+   I
Sbjct: 120 FHHISTDEVYGDLEKGDAFTET-----TPLAPSSPYSASKAASDHLVRAYHRTYGLPALI 174

Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI 340
            R  N YGP    +  +++   +  AL  +PL VYGDG+Q R + +V D  R    +
Sbjct: 175 TRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLV 229

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 98.6 bits (246), Expect = 2e-23
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 28/239 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I+VTGGAG++GSH V +L+  G  V+++DN   G +E +           +  D+ +  
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDRE 60

Query: 178 LL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
           LL       ++D + H A   +       P+K  + NVVGTLN+L   ++ G  +F+ +S
Sbjct: 61  LLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSS 120

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR-GAGVEVRIARIFN 288
           ++ VYG+P   P  E       P+G  + Y   K  +E +  D  +        I R FN
Sbjct: 121 SAAVYGEPSSIPISEDS-----PLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRYFN 175

Query: 289 TYGPRMCIDDGRVVSN------FVAQAL--RKEPLTVYG------DGKQTRSFQFVSDL 333
             G     D G           +  Q    +++ LT++G      DG   R +  V DL
Sbjct: 176 VAGAHPSGDIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDL 234

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score = 96.0 bits (239), Expect = 9e-22
 Identities = 73/243 (30%), Positives = 114/243 (46%), Gaps = 34/243 (13%)

Query: 119 IVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
           I++TG AGF+ SH+ +RLI       ++V+D   +    +N+     +PNF+ ++ D+  
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68

Query: 174 ---VEPLLL--EVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 225
              V  LL+   +D I H A   + V   F N  +  K N+ GT  +L   K  G   RF
Sbjct: 69  ADLVNYLLITEGIDTIMHFAA-QTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127

Query: 226 LLTSTSEVYGDPLQHPQKETYWGNV--------NPIGVRSCYDEGKRTAETLTMDYHRGA 277
           +  ST EVYG+      ++   GN         NP      Y   K  AE L M Y R  
Sbjct: 128 IHVSTDEVYGE----TDEDADVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSY 177

Query: 278 GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
           G+ V   R  N YGP    +  +++  F+  A++ +PL ++GDG   RS+ +  D+    
Sbjct: 178 GLPVITTRGNNVYGPNQFPE--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAF 235

Query: 338 ETI 340
           E +
Sbjct: 236 EVV 238

Length = 668

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score = 93.7 bits (233), Expect = 1e-21
 Identities = 72/245 (29%), Positives = 108/245 (44%), Gaps = 30/245 (12%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-------E 167
           + LRI +TG  GF+ SH+  RL A G  +I  D      K+N   H     F       +
Sbjct: 20  EKLRICITGAGGFIASHIARRLKAEGHYIIASD-----WKKN--EHMSEDMFCHEFHLVD 72

Query: 168 LIRHDVVEPLLLEVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
           L   +    +   VD +++LA     + + + N    +  N + + NML  A+  G  RF
Sbjct: 73  LRVMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRF 132

Query: 226 LLTSTSEVYGDPLQHPQKETYWG----NVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
              S++ +Y    +  Q ET       +  P   +  Y   K   E L   Y +  G+E 
Sbjct: 133 FYASSACIYP---EFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIEC 189

Query: 282 RIARIFNTYGPRMCIDDGR--VVSNFVAQAL-RKEPLTVYGDGKQTRSFQFVSDLV---- 334
           RI R  N YGP      GR    + F  +AL   +   ++GDGKQTRSF F+ + V    
Sbjct: 190 RIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVL 249

Query: 335 RLTET 339
           RLT++
Sbjct: 250 RLTKS 254

Length = 370

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 92.2 bits (230), Expect = 3e-21
 Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 34/243 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +++VTGGAG++GSH V  L+  G  V+V+DN   G +E +         E    D+ +  
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREAL-PRIEKIRIEFYEGDIRDRA 59

Query: 178 LLE-------VDQIYHLACPAS---PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 226
            L+       +D + H A   +    V     P+K    NVVGTLN+L   +  G   F+
Sbjct: 60  ALDKVFAEHKIDAVIHFAALKAVGESVQ---KPLKYYDNNVVGTLNLLEAMRAHGVKNFV 116

Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
            +S++ VYG+P   P  E       P+   + Y   K   E +  D  +  G+   I R 
Sbjct: 117 FSSSAAVYGEPETVPITEEA-----PLNPTNPYGRTKLMVEQILRDLAKAPGLNYVILRY 171

Query: 287 FNTYG--PRMCI-DDGRVVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQFVSD 332
           FN  G  P   I +D ++ +N   +V Q    R+E L ++G      DG   R +  V D
Sbjct: 172 FNPAGAHPSGLIGEDPQIPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVRDYIHVVD 231

Query: 333 LVR 335
           L  
Sbjct: 232 LAD 234

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 91.0 bits (226), Expect = 7e-21
 Identities = 75/246 (30%), Positives = 110/246 (44%), Gaps = 61/246 (24%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +++++TGGAG +GSHL++ L+ RG  V+V+DNF TGR+E++  H   PN  ++   + + 
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDH---PNLTVVEGSIADK 57

Query: 177 LLLEVDQIYHLACPASPVH----YKFNP---VKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
            L  VD+++    P + VH    YK +P    +   TNVVG  N++  AK+ G  R +  
Sbjct: 58  AL--VDKLFGDFKPDAVVHTAAAYK-DPDDWYEDTLTNVVGGANVVQAAKKAGVKRLIYF 114

Query: 229 STSEVYGDP-------LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
            T+  YG         L HP          P G  S Y   K   E     Y   +GV+ 
Sbjct: 115 QTALCYGLKPMQQPIRLDHP--------RAPPG--SSYAISKTAGE----YYLELSGVDF 160

Query: 282 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY----GDGKQ------TRSFQFVS 331
              R+ N  GPR  I                 PL  +      GK+       R F FV 
Sbjct: 161 VTFRLANVTGPRNVIG----------------PLPTFYQRLKAGKKCFVTDTRRDFVFVK 204

Query: 332 DLVRLT 337
           DL R+ 
Sbjct: 205 DLARVV 210

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 89.2 bits (222), Expect = 3e-20
 Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 37/230 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +++VTGGAG++GSH V +L+  G  V+V+DN   G K  ++        +    D+++  
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQF----KFYEGDLLDRA 57

Query: 178 LLE-------VDQIYHLACPAS---PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
           LL        +D + H A   S    V    NP+K    NVVGTLN++    + G + F+
Sbjct: 58  LLTAVFEENKIDAVVHFAASISVGESVQ---NPLKYYDNNVVGTLNLIEAMLQTGVKKFI 114

Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
            +ST+ VYG+P   P  ET      P+   + Y   K  +E +  D  +    +V I R 
Sbjct: 115 FSSTAAVYGEPTTSPISETS-----PLAPINPYGRSKLMSEEILRDAAKANPFKVVILRY 169

Query: 287 FNTYGPRMCIDDGRV------VSN---FVAQAL--RKEPLTVYGDGKQTR 325
           FN  G      DG +       +      A+A   +++ L ++GD   T+
Sbjct: 170 FNVAGACP---DGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTK 216

Length = 329

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 85.8 bits (213), Expect = 6e-19
 Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 44/245 (17%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRK------ENVMHHFGNPNF-ELIR 170
           I+VTGGAGF+GS+LV  L  RG   ++VVDN   G K        +  +    +F + +R
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWVR 61

Query: 171 HDVVEPLLLEVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
                    +++ I+H  AC  +      +    +  N   T  +L        RF+  S
Sbjct: 62  KGDENF---KIEAIFHQGACSDTTET---DGKYMMDNNYQYTKELLHYCLEKKIRFIYAS 115

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD---YHRGAGVEVRIA-- 284
           ++ VYG+      ++    N+ P+ V   Y   K     L  D      G  V  ++   
Sbjct: 116 SAAVYGNGSLGFAEDIETPNLRPLNV---YGYSK-----LLFDQWARRHGKEVLSQVVGL 167

Query: 285 RIFNTYGP------RMCIDDGRVVSNFVAQALRKEPLTV------YGDGKQTRSFQFVSD 332
           R FN YGP      RM      VV +   Q    E + +      Y DG+Q R F +V D
Sbjct: 168 RYFNVYGPREYHKGRM----ASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKD 223

Query: 333 LVRLT 337
           +V++ 
Sbjct: 224 VVKVN 228

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score = 83.5 bits (206), Expect = 5e-18
 Identities = 70/237 (29%), Positives = 108/237 (45%), Gaps = 24/237 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
           +I++TGGAGF+GS LV  +I    D+V+VVD   + G   ++     +  F   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62

Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA---------- 218
              L         D + HLA  +        P   I+TN+VGT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122

Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG 278
           K+   RF   ST EVYGD   H   + ++    P    S Y   K +++ L   + R  G
Sbjct: 123 KKSAFRFHHISTDEVYGD--LH-STDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179

Query: 279 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           +   I    N YGP    +  +++   +  AL  +PL VYG+G+Q R + +V D  R
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHAR 234

Length = 355

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 28/244 (11%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           ++I+VTGGAGF+GS +V  +I    DSV+ VD   + G  E++     +  +     D+ 
Sbjct: 1   MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60

Query: 175 EPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA--------- 218
           +   L+        D + HLA  +        P   I+TN+VGT  +L  A         
Sbjct: 61  DRAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDE 120

Query: 219 -KRVGARFLLTSTSEVYGDPLQHP------QKETYWGNVNPIGVRSCYDEGKRTAETLTM 271
            K+   RF   ST EVYGD L HP      ++   +         S Y   K +++ L  
Sbjct: 121 DKKNAFRFHHISTDEVYGD-LPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVR 179

Query: 272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 331
            + R  G+   +    N YGP    +  +++   +  AL  +PL +YG G Q R + +V 
Sbjct: 180 AWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237

Query: 332 DLVR 335
           D  R
Sbjct: 238 DHAR 241

Length = 352

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 77.0 bits (190), Expect = 7e-16
 Identities = 60/192 (31%), Positives = 85/192 (44%), Gaps = 22/192 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IVVDN--FFTGRKE-NVMHHFGNPNFELIRHD 172
             ++TG  G  GS+L + L+ +G  V  I   +  F T R       H  +P   L   D
Sbjct: 4   VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGD 63

Query: 173 VVEP-----LLLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG-- 222
           + +      +L EV  D+IY+LA   S V   F  P  T   + +GTL +L   + +G  
Sbjct: 64  LTDSSNLLRILEEVQPDEIYNLAAQ-SHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEK 122

Query: 223 -ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
             RF   STSE+YG   + PQKET      P   RS Y   K  A  +T++Y    G+  
Sbjct: 123 KTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGLFA 177

Query: 282 RIARIFNTYGPR 293
               +FN   P 
Sbjct: 178 CNGILFNHESPL 189

Length = 345

>gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 77/264 (29%), Positives = 115/264 (43%), Gaps = 54/264 (20%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF--------------FTGRKENVMH 159
           K L I + G  GF+GSHL ++L+      V+ +D +              ++GR +    
Sbjct: 13  KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQ---- 68

Query: 160 HFGNPNFELIRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
            F   N   I+HD  +E L+   D   +LA   +P  Y   P+ TI +N +  L ++   
Sbjct: 69  -FHRIN---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC 124

Query: 219 KRVGARFLLTSTSEVYGD------PLQHP--QKETYW---GNVNPI------GVRSCYDE 261
                R +  ST EVYG       P  HP  Q   ++    + +P         R  Y  
Sbjct: 125 SENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYAC 184

Query: 262 GKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRM----CID---DG--RVVSNFVAQAL 310
            K+  E L   Y  GA  G+E  I R FN  GPRM     ID   +G  RV++ F    L
Sbjct: 185 AKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 242

Query: 311 RKEPLTVYGDGKQTRSFQFVSDLV 334
           R+EPL +   G+  R+F ++ D +
Sbjct: 243 RREPLKLVDGGQSQRTFVYIKDAI 266

Length = 386

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 70/245 (28%), Positives = 98/245 (40%), Gaps = 58/245 (23%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--------HFGNPNF 166
           KG  I+VTGGAG +GS LV +++  G   ++V      R EN +H         F +   
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILKFGPKKLIV----FDRDENKLHELVRELRSRFPHDKL 56

Query: 167 ELIRHDVVEPLLL-------EVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLN 213
             I  DV +   L         D ++H A        K       NP + IKTNV+GT N
Sbjct: 57  RFIIGDVRDKERLRRAFKERGPDIVFHAAA------LKHVPSMEDNPEEAIKTNVLGTKN 110

Query: 214 MLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
           ++  A   G  +F+  ST +                 VNP+ V       KR AE L + 
Sbjct: 111 VIDAAIENGVEKFVCISTDKA----------------VNPVNV---MGATKRVAEKLLLA 151

Query: 273 YHRGAG-VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 331
            +  +   +    R  N  G R     G V+  F  Q  +  PLTV  D   TR F  + 
Sbjct: 152 KNEYSSSTKFSTVRFGNVLGSR-----GSVLPLFKKQIKKGGPLTVT-DPDMTRFFMTIP 205

Query: 332 DLVRL 336
           + V L
Sbjct: 206 EAVDL 210

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 17/156 (10%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTG  GF+GS+LV  L+A+G  V  +V      R  +          E++  D+ +  
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALV------RSGSDAVLLDGLPVEVVEGDLTDAA 54

Query: 178 LL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            L       D+++HLA   S    K    +  +TNV GT N+L  A   G  R + TS+ 
Sbjct: 55  SLAAAMKGCDRVFHLAAFTSL-WAKDRK-ELYRTNVEGTRNVLDAALEAGVRRVVHTSSI 112

Query: 232 EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE 267
              G P      ET     N     + Y   K  AE
Sbjct: 113 AALGGPPDGRIDET--TPWNERPFPNDYYRSKLLAE 146

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 72.1 bits (176), Expect = 4e-14
 Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 23/234 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV------MHHFGNPNFELIRH 171
           R ++TG AGF+GS L++ L+    +VI +DNF TG + N+      +       F  I+ 
Sbjct: 17  RWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQG 76

Query: 172 DV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARF 225
           D+      +     VD + H A   S      +P+ T   N+ G LNML  A+    + F
Sbjct: 77  DIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSF 136

Query: 226 LLTSTSEVYGDPLQHPQKETYWGN-VNPIGVRSCYDEGKRTAETLTMDYHRGA-GVEVRI 283
              ++S  YGD    P+ E   G  ++P  V    +E    A+     Y   A G+    
Sbjct: 137 TYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNE--LYADVFARSYEFNAIGL---- 190

Query: 284 ARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
            R FN +G R   +     V+  ++   L+ EP+ + GDG  +R F ++ ++++
Sbjct: 191 -RYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQ 243

Length = 348

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 68.7 bits (168), Expect = 5e-13
 Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 36/246 (14%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVV 174
           +R++VTGG+G++GSH   +L+  G  V+++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 175 EPLLLEVDQIYHLACPASPVHYK---------FNPVKTIKTNVVGTLNMLGLAKRVGAR- 224
              LL   +I H     + +H+            P++    NV GTL ++   +    + 
Sbjct: 61  NEALL--TEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVR 282
            + +S++ VYGD  + P  E++     P G  +S Y + K   E +  D  +      + 
Sbjct: 119 LIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173

Query: 283 IARIFNTYGPR----MCIDDGRVVSN---FVAQAL--RKEPLTVYG------DGKQTRSF 327
           + R FN  G      M  D   + +N   ++AQ    R++ L ++G      DG   R +
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY 233

Query: 328 QFVSDL 333
             V DL
Sbjct: 234 IHVMDL 239

Length = 338

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 77/259 (29%), Positives = 115/259 (44%), Gaps = 52/259 (20%)

Query: 113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPNF 166
              G  I+VTGGAG++GSH V +L+  G  V+V+DN     +E +          G+ N 
Sbjct: 2   SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGD-NL 60

Query: 167 ELIRHDVVEPLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTL 212
              + D+ +   LE        D + H A         A P+ Y  N       N+VGT+
Sbjct: 61  VFHKVDLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDN-------NLVGTI 113

Query: 213 NMLGLAKRVGARFLLTSTS-EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM 271
           N+L +  + G + L+ S+S  VYG P + P  E +     P+   + Y   K   E +  
Sbjct: 114 NLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEF-----PLSATNPYGRTKLFIEEICR 168

Query: 272 DYHRGAGVEVRIA--RIFNTYG--PRMCI-DDGRVVSN----FVAQ-AL-RKEPLTVYG- 319
           D H  +  E +I   R FN  G  P   I +D + + N    +V Q A+ R+  LTV+G 
Sbjct: 169 DIHA-SDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGN 227

Query: 320 -----DGKQTRSFQFVSDL 333
                DG   R +  V DL
Sbjct: 228 DYPTKDGTGVRDYIHVMDL 246

Length = 352

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 53/240 (22%), Positives = 91/240 (37%), Gaps = 39/240 (16%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTG------RKENVMHHFGNPNF-ELIR 170
           I+VTGGAGF+GS+LV  L  RG   ++VVDN   G          +  +    +F + + 
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLE 60

Query: 171 HDVVEPLLLEVDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
                    +++ I+H  AC  +    + +    ++ N   +  +L      G  F+  S
Sbjct: 61  KGA----FGKIEAIFHQGACSDT---TETDGEYMMENNYQYSKRLLDWCAEKGIPFIYAS 113

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA--RIF 287
           ++  YGD      +  +          + Y   K   +           +  ++   R F
Sbjct: 114 SAATYGD-----GEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYF 168

Query: 288 NTYGPR------MCIDDGRVVSNFVAQALRKEPLTV------YGDGKQTRSFQFVSDLVR 335
           N YGPR      M      V  +   Q      + +      + DG+Q R F +V D+V 
Sbjct: 169 NVYGPREYHKGKM----ASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVD 224

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 67/248 (27%), Positives = 97/248 (39%), Gaps = 60/248 (24%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIR- 170
            G  ++VTGG G +GS L  +++      I++      R E    ++       F  ++ 
Sbjct: 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIIL----FSRDEYKLYLIDMELREKFPELKL 304

Query: 171 ---------HDVVEPLL--LEVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLN 213
                     D VE  +   +VD ++H A        K      +NP + IKTNV+GT N
Sbjct: 305 RFYIGDVRDRDRVERAMEGHKVDIVFHAAA------LKHVPLVEYNPEEAIKTNVLGTEN 358

Query: 214 MLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
           +   A + G  +F+L ST +                 VNP  V       KR AE L   
Sbjct: 359 VAEAAIKNGVKKFVLISTDKA----------------VNPTNV---MGATKRLAEKLFQA 399

Query: 273 YHR---GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 329
            +R   G G    + R  N  G R     G V+  F  Q     PLTV  D   TR F  
Sbjct: 400 ANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTV-TDPDMTRFFMT 453

Query: 330 VSDLVRLT 337
           + + V+L 
Sbjct: 454 IPEAVQLV 461

Length = 588

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 59/229 (25%), Positives = 91/229 (39%), Gaps = 29/229 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFEL----IRH- 171
            ++VTGG+GF G  LV +L+ R G  V   D    G     +  + +PN E     I   
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEA---LSAWQHPNIEFLKGDITDR 57

Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTI-KTNVVGTLNMLGLAKRVGA-RFLLTS 229
           + VE  L   D ++H    A+ V     P     + NV GT N+L   +R G  +F+ TS
Sbjct: 58  NDVEQALSGADCVFHT---AAIVP-LAGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTS 113

Query: 230 TSEVY--GDPLQHPQKETYWGNVNPIGVRS--CYDEGKRTAETLTMDYHRGAGVEVRIAR 285
           +S V   G  + +  +        P        Y E K  AE + ++ +    +     R
Sbjct: 114 SSSVIFGGQNIHNGDETL------PYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALR 167

Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
               +GP     D  +V      A +     V+G G     F +V +L 
Sbjct: 168 PAGIFGPG----DQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLA 212

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 30/156 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR----KENVMH----HFGNPNFELI 169
            ++VTG  GF+ SH+V++L+  G  V       T R       +         N   E +
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVR-----GTVRSLSKSAKLKALLKAAGYNDRLEFV 55

Query: 170 RHDVV------EPLLLEVDQIYHLACPASPVHYKFNPVKT--IKTNVVGTLNMLGLAKRV 221
             D +      +  L  VD + H+   ASP  +     +   I   V GTLN+L  AK  
Sbjct: 56  IVDDLTAPNAWDEALKGVDYVIHV---ASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAA 112

Query: 222 GA--RFLLTSTSEVYGDPLQHPQKETY----WGNVN 251
           G+  R +LTS+    GDP      + +    W ++ 
Sbjct: 113 GSVKRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLT 148

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 60/230 (26%), Positives = 89/230 (38%), Gaps = 32/230 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +++VTG  GF+G  LVD+L++RG+ V I V N        V+    + +           
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDS-------FTD 53

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTI------KTNVVGTLNMLGLAKRVGA-RFLLTS 229
           L L VD + HL   A+ VH   N           K N   T  +   A R G  RF+  S
Sbjct: 54  LFLGVDAVVHL---AARVH-VMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLS 109

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           + +V G+       +       P   +  Y   K  AE   ++     G+EV I R    
Sbjct: 110 SVKVNGEGTVGAPFDETD-PPAP---QDAYGRSKLEAERALLELGASDGMEVVILRPPMV 165

Query: 290 YGPRMCIDDGRVVSNF--VAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
           YGP        V  NF  + + + +      G  K  RS   + +LV   
Sbjct: 166 YGP-------GVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAI 208

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 64.1 bits (157), Expect = 1e-11
 Identities = 62/237 (26%), Positives = 90/237 (37%), Gaps = 39/237 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I+VTG  G VGS +V  L  RG   +V    F   KE           +L   + V   
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVV----FRTSKE----------LDLTDQEAVRAF 46

Query: 178 LLEV--DQIYHLACPA---SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR---FLLTS 229
             +   D + HLA  A     V     P   ++ N++   N++  A R G +   FL +S
Sbjct: 47  FEKEKPDYVIHLA--AKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSS 104

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF-N 288
               Y D    P  E+      P      Y   KR    L   Y +  G +  I+ +  N
Sbjct: 105 CI--YPDLAPQPIDESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDY-ISVMPTN 161

Query: 289 TYGPRMCIDDGRVVSNFVAQALRK---------EPLTVYGDGKQTRSFQFVSDLVRL 336
            YGP    D     S+ +   +RK         + +TV+G G   R F +  DL R 
Sbjct: 162 LYGPHDNFDPEN--SHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLARA 216

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 31/237 (13%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
            ++++ G  GF+G HL  R++   D  +   +  T R  ++++H   P       D+   
Sbjct: 2   KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNH---PRMHFFEGDITIN 58

Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D I  L   A+P  Y   P++  + +    L ++  A + G   +  ST
Sbjct: 59  KEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 118

Query: 231 SEVYG-------DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           SEVYG       DP   P     +G +N    R  Y   K+  + +   Y    G+   +
Sbjct: 119 SEVYGMCPDEEFDPEASP---LVYGPINK--PRWIYACSKQLMDRVIWAYGMEEGLNFTL 173

Query: 284 ARIFNTYGPRMCIDD--------GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
            R FN  GP +  D          RVV+ F+   +R EP+++   G Q R+F  + D
Sbjct: 174 FRPFNWIGPGL--DSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDD 228

Length = 347

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 62.0 bits (151), Expect = 5e-11
 Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 20/165 (12%)

Query: 120 VVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +VTGG GF+G H+V  L+  G+   V V D  F+              +  I  DV    
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITY--IEGDVTDKQ 58

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TSTS 231
            +   L   D + H A     V  K      +K NV GT N+L    + G R L+ TS+ 
Sbjct: 59  DLRRALQGSDVVIHTAA-IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSM 117

Query: 232 EV-----YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM 271
           EV     YG P+ +  + T +        +  Y E K  AE L +
Sbjct: 118 EVVGPNSYGQPIVNGDETTPY----ESTHQDPYPESKALAEKLVL 158

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 61.2 bits (149), Expect = 9e-11
 Identities = 61/238 (25%), Positives = 87/238 (36%), Gaps = 60/238 (25%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-----VMHHFGNPN-----FE 167
           +I++ GG  F+G  LV+ L+A G  V V   F  GR +      V H  G+ N      E
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTV---FNRGRTKPDLPEGVEHIVGDRNDRDALEE 58

Query: 168 LIRH---DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
           L+     DVV      VD         +P                     L   K    +
Sbjct: 59  LLGGEDFDVV------VDT-----IAYTPRQ---------------VERALDAFKGRVKQ 92

Query: 225 FLLTSTSEVYGDPLQH-----PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
           ++  S++ VY  P +      P +E     ++       Y  GKR AE + ++       
Sbjct: 93  YIFISSASVYLKPGRVITESTPLREPDAVGLSDPWD---YGRGKRAAEDVLIEAAAFPYT 149

Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF--VSDLVR 335
            VR   I   YGP    D    ++ F  +  R  P+ V GDG      QF  V DL R
Sbjct: 150 IVRPPYI---YGPG---DYTGRLAYFFDRLARGRPILVPGDG--HSLVQFIHVKDLAR 199

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 44/246 (17%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI-------VVDNFF-TGRKENVM-HHFGNPN 165
           +G R++VTG  GF GS L   L   G  VI          N F     +N +    G+  
Sbjct: 3   QGKRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISSTRGD-- 60

Query: 166 FELIR-HDVVEPLLLEV--DQIYHLACPASPV---HYKFNPVKTIKTNVVGTLNMLGLAK 219
              IR  + +   + E   + ++HLA  A P+    YK +PV+T +TNV+GT+N+L   +
Sbjct: 61  ---IRDLNALREAIREYEPEIVFHLA--AQPLVRLSYK-DPVETFETNVMGTVNLLEAIR 114

Query: 220 RVGA--RFLLTSTSEVYGDPLQHPQKETYWGNV--NPIGVRSCYDEGKRTAETLTMDYHR 275
             G+    +  ++ + Y +      KE  WG    +P+G    Y   K  AE +   Y  
Sbjct: 115 ETGSVKAVVNVTSDKCYEN------KEWGWGYRENDPLGGHDPYSSSKGCAELIISSYRN 168

Query: 276 ---------GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS 326
                      G+ +  AR  N  G     +D R+V + +      E + +       R 
Sbjct: 169 SFFNPENYGKHGIAIASARAGNVIGGGDWAED-RIVPDCIRAFEAGERVIIRNP-NAIRP 226

Query: 327 FQFVSD 332
           +Q V +
Sbjct: 227 WQHVLE 232

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 61/276 (22%), Positives = 91/276 (32%), Gaps = 61/276 (22%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM------------------ 158
           +++++ GG G+ G      L  RG  V +VDN    R +  +                  
Sbjct: 1   MKVLILGGDGYCGWPTALHLSKRGHEVCIVDNLVRRRIDVELGLESLTPIASIHERLRAW 60

Query: 159 -HHFGNPNFELIRHDVVEPLLL-------EVDQIYHLAC-PASP-----VHYKFNPVKTI 204
               G    E    D  +   L       E D + H A   ++P       +      T 
Sbjct: 61  KELTGKTI-EFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMIDREHA---NYTQ 116

Query: 205 KTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDP----LQHPQKETYWG----NVNPIG 254
             NV+GTLN+L   K        +   T   YG P     +      + G       P  
Sbjct: 117 HNNVIGTLNLLFAIKEFDPDCHLVKLGTMGEYGTPNIDIPEGYITIEHNGRRDTLPYPKQ 176

Query: 255 VRSCYDEGKRTAETLTMDYHRGAGV---EVRIARIFNTYGPRMCIDD------------G 299
             S Y   K       M   +  G+   ++    ++ T       D+            G
Sbjct: 177 AGSWYHLSKVHDSHNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDYDGVFG 236

Query: 300 RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
            V++ F  QA    PLTVYG G QTR F  + D V+
Sbjct: 237 TVLNRFCVQAAIGHPLTVYGKGGQTRGFISIRDTVQ 272

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 69/230 (30%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           ++++TG +GFVG  L +RL++                         PN  LI  DVV P 
Sbjct: 2   KVLITGASGFVGQRLAERLLSDV-----------------------PNERLILIDVVSPK 38

Query: 178 -------------------LLEV------DQIYHLACPASPVHYKFNPVKTIKTNVVGTL 212
                              L+E       D ++HLA   S    + +     + NV GT 
Sbjct: 39  APSGAPRVTQIAGDLAVPALIEALANGRPDVVFHLAAIVSG-GAEADFDLGYRVNVDGTR 97

Query: 213 NMLGLAKRVGA--RFLLTSTSEVYGDPLQHP-QKETYWGNVNPIGVRSCYDEGKRTAETL 269
           N+L   ++ G   RF+ TS+  VYG PL +P    T    ++P    S Y   K   E L
Sbjct: 98  NLLEALRKNGPKPRFVFTSSLAVYGLPLPNPVTDHT---ALDPA---SSYGAQKAMCELL 151

Query: 270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA----LRKEPL 315
             DY R   V+ R  R+     P +C+  GR   N  A A    + +EPL
Sbjct: 152 LNDYSRRGFVDGRTLRL-----PTVCVRPGR--PNKAASAFASTIIREPL 194

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 22/136 (16%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVD---NFFTGRKENVMHHFGNPNFELIRHDVVE 175
           + VTGG GF+G HLV RL+  G  V+V+    +     +             ++  D+ +
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60

Query: 176 P-----------LLLEVDQIYHLACPASPVHYKFN--PVKTIKTNVVGTLNMLGLAKRVG 222
           P           L  +VD + H A  AS   Y F        +TN+ GT ++L LA R+ 
Sbjct: 61  PNLGLSAAASRELAGKVDHVIHCA--AS---YDFQAPNEDAWRTNIDGTEHVLELAARLD 115

Query: 223 A-RFLLTSTSEVYGDP 237
             RF   ST+ V G+ 
Sbjct: 116 IQRFHYVSTAYVAGNR 131

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 29/194 (14%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENV---MHHFGNPNFELIRHDV 173
           +TG  G  GS+L + L+ +G  V  +     +F T R E++    H+      +L   D+
Sbjct: 5   ITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDL 64

Query: 174 VEPLLL-------EVDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNML------GLAK 219
            +   L       +  +IY+LA   S V   F  P  T   + +GTL +L      GL K
Sbjct: 65  TDSSNLRRIIDEIKPTEIYNLAA-QSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIK 123

Query: 220 RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
            V  +F   STSE+YG   + PQ ET      P   RS Y   K  A  +T++Y    G+
Sbjct: 124 SV--KFYQASTSELYGKVQEIPQNET-----TPFYPRSPYAAAKLYAHWITVNYREAYGL 176

Query: 280 EVRIARIFNTYGPR 293
                 +FN   PR
Sbjct: 177 FAVNGILFNHESPR 190

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 53/200 (26%), Positives = 78/200 (39%), Gaps = 41/200 (20%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMH--HFGNPNFELIRH--- 171
           +TG  G  GS+L + L+++G  V  I+    NF T R +++    H      +L  H   
Sbjct: 11  ITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKL--HYGD 68

Query: 172 -----------DVVEPLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML---- 215
                      D ++P     D++Y+LA   S V   F  P  T      G L +L    
Sbjct: 69  LSDASSLRRWLDDIKP-----DEVYNLAA-QSHVAVSFEMPDYTADVVATGALRLLEAVR 122

Query: 216 --GLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY 273
             G       ++    +SE+YG     PQ ET      P   RS Y   K  A   T++Y
Sbjct: 123 LHGQETGRQIKYYQAGSSEMYGS-TPPPQSET-----TPFHPRSPYAVAKVAAHWYTVNY 176

Query: 274 HRGAGVEVRIARIFNTYGPR 293
               G+      +FN   PR
Sbjct: 177 REAYGLFACNGILFNHESPR 196

Length = 340

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 49/216 (22%), Positives = 73/216 (33%), Gaps = 51/216 (23%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           ++I++TG  G +G+ L   L    + VI  D                   ++   D V  
Sbjct: 1   MKILITGANGQLGTELRRALPGEFE-VIATD---------------RAELDITDPDAVLE 44

Query: 177 LLLEV--DQIYHLA------CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           ++ E   D + + A         S       P      N  G  N+   A  VGAR +  
Sbjct: 45  VIRETRPDVVINAAAYTAVDKAES------EPELAFAVNATGAENLARAAAEVGARLVHI 98

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           ST  V+      P KET     NP+ V   Y   K   E           + +R + ++ 
Sbjct: 99  STDYVFDGEKGGPYKET--DTPNPLNV---YGRSKLAGEEAVRAAGPRHLI-LRTSWVYG 152

Query: 289 TYGPRMCIDDGRVVSNFVAQALRK----EPLTVYGD 320
            YG           +NFV   LR     + L V  D
Sbjct: 153 EYG-----------NNFVKTMLRLAKEGKELKVVDD 177

Length = 281

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 49/235 (20%), Positives = 82/235 (34%), Gaps = 46/235 (19%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE 180
           V G +G +G  +   L  RG  V +V    +G K         P  E++  D ++   + 
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSR--SGSKLA-----WLPGVEIVAADAMDASSVI 56

Query: 181 -----VDQIYHLACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
                 D IYH A PA       F P+           N++  A+  GA+ +L     +Y
Sbjct: 57  AAARGADVIYHCANPAYTRWEELFPPLME---------NVVAAAEANGAKLVLPGNVYMY 107

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGK-RTA-ETLTMDYHRGAGVEVRIARIFNTYGP 292
           G     P  E       P        +G+ R   E   +  H    +   I R  + YGP
Sbjct: 108 GPQAGSPITEDT--PFQPTT-----RKGRIRAEMEERLLAAHAKGDIRALIVRAPDFYGP 160

Query: 293 RMCIDDGRVVSNF----VAQALRKEPLTVYGDGKQTRSFQFVSD----LVRLTET 339
                    ++++    +   L+ +     G+      + ++ D    LV L E 
Sbjct: 161 -------GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEE 208

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 39/204 (19%)

Query: 118 RIVVTGGAGFVGSHLV------------------------DRLIARGDSVIVVDNFFTGR 153
            +++TG  GF+G++L+                         RL    D     D     R
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 154 KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLN 213
            E V      P+  L      E L   VD I H    A+ V++ F   +    NV+GT  
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQE-LAENVDLIIH---NAALVNHVFPYSELRGANVLGTAE 117

Query: 214 MLGLAKRVGARFL-LTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
           +L LA     + L   S+  V            +                +   + L   
Sbjct: 118 VLRLAATGKPKPLHYVSSISVGETEYYSNFTVDF----------DEISPTRNVGQGLAGG 167

Query: 273 YHRGAGVEVRIARIFNTYGPRMCI 296
           Y R   V  ++ R     G  + I
Sbjct: 168 YGRSKWVAEKLVREAGDRGLPVTI 191

Length = 382

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 54.4 bits (132), Expect = 2e-08
 Identities = 67/243 (27%), Positives = 97/243 (39%), Gaps = 60/243 (24%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHH--FGNPNFELIRH-- 171
           ++VTGG G +GS L  +++      I++   F  R E     +        N   +R   
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIIL---F-SRDEFKLYEIRQELRQEYNDPKLRFFI 56

Query: 172 -DVVEPLLLE-------VDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLNMLGL 217
            DV +   LE       VD ++H A        K      +NP++ IKTNV+GT N+   
Sbjct: 57  GDVRDRERLERAMEQHGVDTVFHAAA------LKHVPLVEYNPMEAIKTNVLGTENVAEA 110

Query: 218 AKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
           A   G  +F+L ST +                 VNP  V       KR AE L    +R 
Sbjct: 111 AIENGVEKFVLISTDKA----------------VNPTNV---MGATKRLAEKLFQAANRE 151

Query: 277 AG-VEVRIA--RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
           +G  + R +  R  N  G R     G V+  F  Q     P+TV      TR F  + + 
Sbjct: 152 SGSGKTRFSVVRFGNVLGSR-----GSVIPLFKKQIANGGPVTV-THPDMTRFFMTIPEA 205

Query: 334 VRL 336
           V+L
Sbjct: 206 VQL 208

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 56/226 (24%), Positives = 84/226 (37%), Gaps = 39/226 (17%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TG  G +G  LV +L +    V+V                     +L   + +E L
Sbjct: 1   RILITGANGQLGRELVQQL-SPEGRVVVA--------------LTRSQLDLTDPEALERL 45

Query: 178 LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
           L  +  D + + A        + +P K    N +   N+   A R GAR +  ST  V+ 
Sbjct: 46  LRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFD 105

Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              + P +E      NP+ V   Y + K   E         A + VR + ++   G R  
Sbjct: 106 GEGKRPYRED--DATNPLNV---YGQSKLAGEQAVRAAGPNALI-VRTSWLYGGGGGR-- 157

Query: 296 IDDGRVVSNFVAQALRK----EPLTVYGDGKQTRSFQFVSDLVRLT 337
                   NFV   LR     E L V  D  Q  S  +  DL R+ 
Sbjct: 158 --------NFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVI 193

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 53.3 bits (129), Expect = 5e-08
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 19/147 (12%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV-IVVDNFFTGRKENVMH----HFGNPNFELIRHDVVE 175
           VTG +GF+GS LV RL+ RG +V   V +   G ++ V H           +L + D+++
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRD--PGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 176 PLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT 228
               +      D ++H+A P      +    + I+  V GTLN+L    +  +  R + T
Sbjct: 61  YGSFDAAIDGCDGVFHVASPVDF-DSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 229 -STSEVYGDPLQHPQK---ETYWGNVN 251
            S + V  +P +   K   E+ W +++
Sbjct: 120 SSVAAVVWNPNRGEGKVVDESCWSDLD 146

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 39/197 (19%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVV-----DNFFTG--RKENVMHHFGNPNFELIRH-- 171
           +TG  GF+G  L+++L+     V +       +  +   R    +  +G  +        
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 172 -----DVVEPLL-----------LEVDQIYHLACPASPVHYKFN-PVKTIK-TNVVGTLN 213
                D+ EP L            EVD I H A  A+     F  P   ++ TNV+GT  
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNA--AT---VNFVEPYSDLRATNVLGTRE 115

Query: 214 MLGLAKRVG-ARFLLTSTSEVYGDPLQH----PQKETYWGNVNPIGVRSCYDEGKRTAET 268
           +L LAK++    F   ST+ V G+        P K          G+ + Y + K  AE 
Sbjct: 116 VLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQ 175

Query: 269 LTMDYHRGAGVEVRIAR 285
           L  +     G+ V I R
Sbjct: 176 LVREAAG--GLPVVIYR 190

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 55/178 (30%), Positives = 73/178 (41%), Gaps = 23/178 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNP-------NFEL 168
           RI++TGG G +GS L   L  R   D+VI  D     RK         P       +F+ 
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIASDI----RKPPAHVVLSGPFEYLDVLDFKS 56

Query: 169 IRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           +   VV     ++  I HLA   S V  K NP      N+ G  N+L LA+    R  + 
Sbjct: 57  LEEIVVN---HKITWIIHLAALLSAVGEK-NPPLAWDVNMNGLHNVLELAREHNLRIFVP 112

Query: 229 STSEVYGDPLQHPQKETYWGNV-NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
           ST   +G     P+  T    +  P   R+ Y   K  AE L   YH   GV+ R  R
Sbjct: 113 STIGAFGP--TTPRNNTPDDTIQRP---RTIYGVSKVAAELLGEYYHHKFGVDFRSLR 165

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV----- 173
           I++ G  GF+G  L   L+ +G  V ++      R    +         ++  D+     
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLV-----RNTKRLSKEDQEPVAVVEGDLRDLDS 55

Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
           +   +  VD + HL   A       +     + +V GT N+L  AK  G   F+  S+  
Sbjct: 56  LSDAVQGVDVVIHL---AGAPRDTRDF---CEVDVEGTRNVLEAAKEAGVKHFIFISSLG 109

Query: 233 VYGDP 237
            YGD 
Sbjct: 110 AYGDL 114

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 50.3 bits (120), Expect = 4e-07
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 22/125 (17%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRKENVMHHFGN-----PNFELIRHDV 173
           VTG +GFV SH+V++L+ RG  V   V D      K   ++H  +        EL   D+
Sbjct: 3   VTGASGFVASHVVEQLLERGYKVRATVRD----PSKVKKVNHLLDLDAKPGRLELAVADL 58

Query: 174 VEPLLLE-----VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA--RF 225
            +    +        ++H+   A+PV +   +P + IK  + GTLN L  A    +  RF
Sbjct: 59  TDEQSFDEVIKGCAGVFHV---ATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRF 115

Query: 226 LLTST 230
           +LTS+
Sbjct: 116 VLTSS 120

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 58/225 (25%), Positives = 86/225 (38%), Gaps = 36/225 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I++TG  G +G  LV  L  RG  VI      TGR             +L   D VE  
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVI-----GTGRS-----RASLFKLDLTDPDAVEEA 50

Query: 178 LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY- 234
           + +   D I + A        + +P    + NV+   N+   AK VGAR +  ST  V+ 
Sbjct: 51  IRDYKPDVIINCAAYTRVDKCESDPELAYRVNVLAPENLARAAKEVGARLIHISTDYVFD 110

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF--NTYGP 292
           G   + P KE      NP+ V   Y + K   E   ++ +    + +R + ++     G 
Sbjct: 111 GK--KGPYKEE--DAPNPLNV---YGKSKLLGEVAVLNANPRYLI-LRTSWLYGELKNG- 161

Query: 293 RMCIDDGRVVSNFVAQALRK--EPLTVYGDGKQTRSFQFVSDLVR 335
                      NFV   LR   E   V     Q  S  + +DL  
Sbjct: 162 ----------ENFVEWMLRLAAERKEVNVVHDQIGSPTYAADLAD 196

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 53/185 (28%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           ++VTGG+G +G  +   L +RG   V+VV      R++ V+H+    +            
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS-----RRDVVVHNAAILD-----------D 44

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK-----RVGARFLLTSTSE 232
              +D                   + I+ NVVGT  +L  A+     +   RF+L S+  
Sbjct: 45  GRLIDLT------------GSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISSVA 92

Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR---GAGVEVRIARIFNT 289
                          G          Y   K   + L   +     G G+          
Sbjct: 93  GLFG---------APGLGG-------YAASKAALDGLAQQWASEGWGNGLPATAVACGTW 136

Query: 290 YGPRM 294
            G  M
Sbjct: 137 AGSGM 141

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 45/212 (21%), Positives = 79/212 (37%), Gaps = 30/212 (14%)

Query: 120 VVTGGAGFVGSHLVDRLIARGDS---VIVVDNFFTGRKENVMHHFGNPNF-ELIRHDV-- 173
           +VTGG GF+G H++  L+ R +    + V+D  F               +   I  D+  
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62

Query: 174 VEPLLLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL-TS 229
           +  L      V  + H A     V    N  +  + NV GT  +L    +   + L+ TS
Sbjct: 63  LSFLFRACQGVSVVIHTAAIVD-VFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVYTS 121

Query: 230 TSEV-----YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH----RGAGVE 280
           + EV      G P+ +  ++T + + +       Y   K  AE + ++ +    +  G  
Sbjct: 122 SIEVAGPNFKGRPIFNGVEDTPYEDTSTPP----YASSKLLAENIVLNANGAPLKQGGYL 177

Query: 281 VRIA-RIFNTYGPRMCIDDGRVVSNFVAQALR 311
           V  A R    YG     +    ++      L 
Sbjct: 178 VTCALRPMYIYG-----EGSHFLTEIFDFLLT 204

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 46/208 (22%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV--------DNFFTGRKENVMHHFGN------ 163
            +++TG  GF+G++L+  L+ R +   +         +       +N+  +  N      
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 164 -PNFELIRHDVVEPLL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGT 211
               +++  D+ +P L            EVD I H    A+ V++ +   +    NV+GT
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIH--NGAN-VNWVYPYEELKPANVLGT 117

Query: 212 LNMLGLA-KRVGARFLLTSTSEVYGDPLQHPQKETYWGN--VNPIGVRSCYDEGKRTAET 268
             +L LA           ST  V+     +   +    +   +  G+ + Y + K  AE 
Sbjct: 118 KELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKWVAE- 176

Query: 269 LTMDYHRGAGVEVRIARIFNTYGPRMCI 296
                        ++ R     G  + I
Sbjct: 177 -------------KLLREAANRGLPVAI 191

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI-------VVDNFFT--GRKENVMHHFGNPN 165
           +G +++VTG  GF GS L   L+  G  V           N F      + +  HFG+  
Sbjct: 3   QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR 62

Query: 166 -FELIRHDVVEPLLLEVDQIYHLACPASPV---HYKFNPVKTIKTNVVGTLNMLGLAKRV 221
               +R  + E    + + ++HLA  A P+    Y  +P++T +TNV+GT+N+L   + +
Sbjct: 63  DAAKLRKAIAE---FKPEIVFHLA--AQPLVRKSYA-DPLETFETNVMGTVNLLEAIRAI 116

Query: 222 G 222
           G
Sbjct: 117 G 117

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 52/203 (25%), Positives = 77/203 (37%), Gaps = 44/203 (21%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           ++I++TG  GF+G +L+ RL  + D  I    FF  R         +   EL      + 
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDI----FFYDR--------ESDESEL------DD 42

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSEVY 234
            L   D I+HLA    P        +    NV  T  +L    R G +   LL+S+ +  
Sbjct: 43  FLQGADFIFHLAGVNRPKD----EAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQAA 98

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
            D              NP      Y + K  AE L  +Y R  G  V I R+ N +G   
Sbjct: 99  LD--------------NP------YGKSKLAAEELLQEYARETGAPVYIYRLPNVFGKWC 138

Query: 295 CIDDGRVVSNFVAQALRKEPLTV 317
             +    V+ F     R  P+ +
Sbjct: 139 RPNYNSAVATFCYNIARDLPIQI 161

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 46.5 bits (111), Expect = 9e-06
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 23/125 (18%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           ++++VTG  GFVGS +V  L+ +G+ V  +V     T  + N+       + E++  D+ 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRP---TSDRRNL----EGLDVEIVEGDLR 53

Query: 175 EPLLLE-----VDQIYHLACPASPVHYKF---NPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
           +P  L         ++H+A       Y+    +P +    NV GT N+L  A   G  R 
Sbjct: 54  DPASLRKAVAGCRALFHVA-----ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERV 108

Query: 226 LLTST 230
           + TS+
Sbjct: 109 VYTSS 113

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 44.1 bits (105), Expect = 4e-05
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 12/74 (16%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP- 176
           +IV+TGG GF+G  L  RL A G  V+V+      R+            E+I  D +   
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVL-----SRRPGK----AEGLAEVITWDGLSLG 51

Query: 177 --LLLEVDQIYHLA 188
              L   D + +LA
Sbjct: 52  PWELPGADAVINLA 65

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV 146
           +I+VTG  GFVG  +V  L+ARG  V   
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAA 30

Length = 275

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 34/232 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT-----GRKENVMHHFGNPNFELIRH 171
             +V GG+GF+G HLV++L+ RG+ +V V D   T          V  H G    +L   
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTG----DLTDP 56

Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLT 228
             +E    E   + ++H    ASP H   N     K NV GT N++   ++ G +  + T
Sbjct: 57  QDLEKAFNEKGPNVVFHT---ASPDH-GSNDDLYYKVNVQGTRNVIEACRKCGVKKLVYT 112

Query: 229 STSEVY--GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG----VEVR 282
           S++ V   G  +     E+      P   +  Y+E K  AE L +  +          +R
Sbjct: 113 SSASVVFNGQDI-INGDESL---PYPDKHQDAYNETKALAEKLVLKANDPESGLLTCALR 168

Query: 283 IARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
            A IF   GP     D ++V   +  A   +     GDG     F +V ++ 
Sbjct: 169 PAGIF---GPG----DRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVA 213

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 48/210 (22%), Positives = 72/210 (34%), Gaps = 42/210 (20%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTG  G +G  L   L  RG  V+        R E           +L   + V  L+
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVA-----LDRPE----------LDLTDPEAVAALV 45

Query: 179 LEV--DQIYHLACPA-SPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
            E   D + + A  A + V   +  P      N +G  N+       GA  +  ST  V+
Sbjct: 46  REARPDVVVNAA--AYTAVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHISTDYVF 103

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
                 P +E       P+ V   Y   K   E   +  +    + +R A ++  YG   
Sbjct: 104 DGAKGGPYRED--DPTGPLNV---YGRTKLAGEQAVLAANPRHLI-LRTAWVYGEYGN-- 155

Query: 295 CIDDGRVVSNFVA----QALRKEPLTVYGD 320
                    NFV      A  ++ L V  D
Sbjct: 156 ---------NFVKTMLRLAAERDELRVVDD 176

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 43.9 bits (104), Expect = 6e-05
 Identities = 40/124 (32%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I+VTG AG +G  L  RL A    VI VD     R          P  E +R D+ +P  
Sbjct: 1   ILVTGAAGGLGRLLARRL-AASPRVIGVDGLDRRRPPGSP-----PKVEYVRLDIRDPAA 54

Query: 179 L------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
                  E D + HLA    P     +  +  + NV GT N+L      G  R ++TS+ 
Sbjct: 55  ADVFREREADAVVHLAFILDPPR---DGAERHRINVDGTQNVLDACAAAGVPRVVVTSSV 111

Query: 232 EVYG 235
            VYG
Sbjct: 112 AVYG 115

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 6/70 (8%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I++TGG GF+G  L  RL  RG  V +     T       +            D     L
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTI----LTRSPPPGANTKWEGYKPWAGED--ADSL 54

Query: 179 LEVDQIYHLA 188
              D + +LA
Sbjct: 55  EGADAVINLA 64

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 30/229 (13%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV- 173
           K   +++TGG G  G+ ++ R +      I + +    +++++   + N   +    DV 
Sbjct: 3   KDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVR 62

Query: 174 ----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNML--GLAKRVGARFLL 227
               +      VD IYH A        +F+P++ +KTNV+GT N+L   +A  V     L
Sbjct: 63  DYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVVCL 122

Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           ++   VY               +N +G+     E    A++  +D  +      R     
Sbjct: 123 STDKAVY--------------PINAMGISKAMMEKVMVAKSRNVDSSKTVICGTR----- 163

Query: 288 NTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL 336
             YG  M    G V+  FV      +PLT+  D   TR    + D V L
Sbjct: 164 --YGNVMA-SRGSVIPLFVDLIKAGKPLTI-TDPNMTRFMMTLEDAVDL 208

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 41.5 bits (97), Expect = 3e-04
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 25/142 (17%)

Query: 102 VNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMH 159
           +N GGK+          + VTG +G++ S +V  L+ RG +V       T RK  E+++ 
Sbjct: 1   MNGGGKL----------VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA 50

Query: 160 HFG-NPNFELIRHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKT--IKTNVVGT 211
             G     +L + D++E    E      D ++H    ASPV +     +T  I   + GT
Sbjct: 51  LDGAKERLKLFKADLLEESSFEQAIEGCDAVFH---TASPVFFTVKDPQTELIDPALKGT 107

Query: 212 LNMLGLAKRVGA--RFLLTSTS 231
           +N+L   K   +  R +LTS++
Sbjct: 108 INVLNTCKETPSVKRVILTSST 129

Length = 322

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 19/40 (47%), Positives = 22/40 (55%)

Query: 299 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE 338
           G  ++ F  QA    PLTVYG G QTR F  + D VR  E
Sbjct: 283 GTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIE 322

Length = 442

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 119 IVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRK 154
           I+VTGGAGF+GS++V  L  +G   ++VVDN   G K
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK 38

Length = 308

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVI 144
           +++ VTG  GF+GS +V  L+A G  V+
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVV 28

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 53/160 (33%)

Query: 118 RIVVTGGAGFVGSHLVDRLI------------ARGDS----------VIVVDNFFTGRKE 155
            +++TG  GF+G  L+++L+             RG S          ++    F  GR  
Sbjct: 2   SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61

Query: 156 NVMHHFGNPNFE----LIRHDVVEP-----------LLLEVDQIYHLACPASPVHYKFNP 200
           N       P FE     I  D+ EP           L+ EV+ I H A  A+     F+ 
Sbjct: 62  N-------PLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCA--AT---VTFDE 109

Query: 201 --VKTIKTNVVGTLNMLGLAKRV--GARFLLTSTSEVYGD 236
              + +  NV+GTL +L LAKR      F+  ST+ V GD
Sbjct: 110 RLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYVNGD 149

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVV 146
           I++TGG G +G  L  RL   G  V ++
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTIL 28

Length = 297

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 41/135 (30%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIV---VDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           R  VTGG GF+G  LV RL+ R     V   V      R E +  ++G      +  D+ 
Sbjct: 2   RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLT 61

Query: 175 EPLL----------LEVDQIYHLACPASPVHYKFNP--VKTIKTNVVGTLNMLGLAKRVG 222
           EP L           ++D + HLA       Y            NV GT N++ LA+R+ 
Sbjct: 62  EPGLGLSEADIAELGDIDHVVHLAAI-----YDLTADEEAQRAANVDGTRNVVELAERLQ 116

Query: 223 AR-FLLTSTSEVYGD 236
           A  F   S+  V GD
Sbjct: 117 AATFHHVSSIAVAGD 131

Length = 657

>gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 23/232 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDV--- 173
           R+++ G  GF+G+HL +RL+   +  +    +      + +  F G+P F  +  D+   
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDNYEV----YGLDIGSDAISRFLGHPRFHFVEGDISIH 372

Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPST 432

Query: 231 SEVYG---DPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           SEVYG   D   +  ++T    V PI   R  Y   K+  + +   Y    G+   + R 
Sbjct: 433 SEVYGMCTDK--YFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRP 490

Query: 287 FNTYGPRM------CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
           FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 491 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRD 542

Length = 660

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVV 146
            + V G  GF+G ++V+RL  RG  VIV 
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVP 30

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 17/131 (12%)

Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIV----VDNFFTGRKENVMHHFGNPNFELI 169
            K   + V G  G  G  +V++L+A+G +V      VD   T   +       +P+ +++
Sbjct: 15  VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-------DPSLQIV 67

Query: 170 RHDVVEPL--LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-R 224
           R DV E    L+E   D    + C A+     F+P    K +  GT+N++   ++ G  R
Sbjct: 68  RADVTEGSDKLVEAIGDDSDAVIC-ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTR 126

Query: 225 FLLTSTSEVYG 235
           F+L S+  V G
Sbjct: 127 FILVSSILVNG 137

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	340
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.98
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.98
PLN02214	342	cinnamoyl-CoA reductase	99.98
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.97
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
PLN00198	338	anthocyanidin reductase; Provisional	99.97
PLN02653	340	GDP-mannose 4,6-dehydratase	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.97
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.97
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.97
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.97
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.97
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.97
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.97
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02240	352	UDP-glucose 4-epimerase	99.96
PLN02650	351	dihydroflavonol-4-reductase	99.96
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.96
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.96
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.96
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.96
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.96
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.95
PLN02686	367	cinnamoyl-CoA reductase	99.95
PLN02996	491	fatty acyl-CoA reductase	99.95
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.95
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.95
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.95
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.95
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.94
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
PLN02583	297	cinnamoyl-CoA reductase	99.94
PLN00016	378	RNA-binding protein; Provisional	99.94
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.94
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.94
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.93
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.93
PLN02778	298	3,5-epimerase/4-reductase	99.93
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.93
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.93
PRK07201	657	short chain dehydrogenase; Provisional	99.92
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.91
CHL00194	317	ycf39 Ycf39; Provisional	99.9
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.9
PLN02503	605	fatty acyl-CoA reductase 2	99.89
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.88
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.86
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.86
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.86
PRK09135	249	pteridine reductase; Provisional	99.86
PRK05865	854	hypothetical protein; Provisional	99.85
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.85
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.85
PRK12320	699	hypothetical protein; Provisional	99.85
PRK06482	276	short chain dehydrogenase; Provisional	99.85
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.85
PRK06194	287	hypothetical protein; Provisional	99.84
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.84
PRK05876	275	short chain dehydrogenase; Provisional	99.84
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.84
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07890	258	short chain dehydrogenase; Provisional	99.84
PRK06138	252	short chain dehydrogenase; Provisional	99.84
PRK05717	255	oxidoreductase; Validated	99.83
PRK07775	274	short chain dehydrogenase; Provisional	99.83
PRK07067	257	sorbitol dehydrogenase; Provisional	99.83
PLN02260	668	probable rhamnose biosynthetic enzyme	99.83
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.83
PRK07774	250	short chain dehydrogenase; Provisional	99.82
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK06500	249	short chain dehydrogenase; Provisional	99.82
PRK06180	277	short chain dehydrogenase; Provisional	99.82
PRK06128	300	oxidoreductase; Provisional	99.82
PLN03209	576	translocon at the inner envelope of chloroplast su	99.82
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.82
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.81
PRK06914	280	short chain dehydrogenase; Provisional	99.81
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.81
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.81
PRK12829	264	short chain dehydrogenase; Provisional	99.81
PRK06181	263	short chain dehydrogenase; Provisional	99.81
PRK12827	249	short chain dehydrogenase; Provisional	99.81
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.81
PLN02253	280	xanthoxin dehydrogenase	99.81
PRK07806	248	short chain dehydrogenase; Provisional	99.81
PRK07060	245	short chain dehydrogenase; Provisional	99.81
PRK05875	276	short chain dehydrogenase; Provisional	99.8
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.8
PRK08263	275	short chain dehydrogenase; Provisional	99.8
PRK07985	294	oxidoreductase; Provisional	99.8
PRK06701	290	short chain dehydrogenase; Provisional	99.8
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK06182	273	short chain dehydrogenase; Validated	99.8
PRK07074	257	short chain dehydrogenase; Provisional	99.8
PRK06123	248	short chain dehydrogenase; Provisional	99.8
PRK06523	260	short chain dehydrogenase; Provisional	99.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.79
PRK12828	239	short chain dehydrogenase; Provisional	99.79
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.79
PRK12746	254	short chain dehydrogenase; Provisional	99.79
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.79
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.79
PRK08628	258	short chain dehydrogenase; Provisional	99.79
PRK06841	255	short chain dehydrogenase; Provisional	99.79
PRK07024	257	short chain dehydrogenase; Provisional	99.79
PRK09186	256	flagellin modification protein A; Provisional	99.79
PRK08264	238	short chain dehydrogenase; Validated	99.78
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.78
PRK06114	254	short chain dehydrogenase; Provisional	99.78
PRK08324	681	short chain dehydrogenase; Validated	99.78
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.78
PRK06398	258	aldose dehydrogenase; Validated	99.78
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.78
PRK09134	258	short chain dehydrogenase; Provisional	99.78
PRK12937	245	short chain dehydrogenase; Provisional	99.78
PRK06196	315	oxidoreductase; Provisional	99.78
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK07856	252	short chain dehydrogenase; Provisional	99.77
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK08589	272	short chain dehydrogenase; Validated	99.77
PRK12747	252	short chain dehydrogenase; Provisional	99.77
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.77
PRK06179	270	short chain dehydrogenase; Provisional	99.77
PRK07825	273	short chain dehydrogenase; Provisional	99.77
PRK08219	227	short chain dehydrogenase; Provisional	99.77
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK09242	257	tropinone reductase; Provisional	99.77
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.77
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.77
PRK06949	258	short chain dehydrogenase; Provisional	99.77
PRK12939	250	short chain dehydrogenase; Provisional	99.77
PRK10538	248	malonic semialdehyde reductase; Provisional	99.76
PRK12744	257	short chain dehydrogenase; Provisional	99.76
PRK12743	256	oxidoreductase; Provisional	99.76
PRK05872	296	short chain dehydrogenase; Provisional	99.76
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.76
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK07814	263	short chain dehydrogenase; Provisional	99.76
PRK05993	277	short chain dehydrogenase; Provisional	99.75
PRK08265	261	short chain dehydrogenase; Provisional	99.75
PRK07577	234	short chain dehydrogenase; Provisional	99.75
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.75
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.75
PRK07478	254	short chain dehydrogenase; Provisional	99.75
PRK06197	306	short chain dehydrogenase; Provisional	99.75
PRK07063	260	short chain dehydrogenase; Provisional	99.75
PRK05650	270	short chain dehydrogenase; Provisional	99.75
PRK05854	313	short chain dehydrogenase; Provisional	99.75
PRK07069	251	short chain dehydrogenase; Validated	99.75
PRK07454	241	short chain dehydrogenase; Provisional	99.75
PRK07576	264	short chain dehydrogenase; Provisional	99.75
PRK07035	252	short chain dehydrogenase; Provisional	99.75
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.74
PRK05867	253	short chain dehydrogenase; Provisional	99.74
PRK09291	257	short chain dehydrogenase; Provisional	99.74
PRK08226	263	short chain dehydrogenase; Provisional	99.74
PRK06101	240	short chain dehydrogenase; Provisional	99.74
PRK08267	260	short chain dehydrogenase; Provisional	99.74
PRK07831	262	short chain dehydrogenase; Provisional	99.74
PRK06483	236	dihydromonapterin reductase; Provisional	99.74
PRK08643	256	acetoin reductase; Validated	99.74
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.74
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.74
PRK08017	256	oxidoreductase; Provisional	99.74
PRK07677	252	short chain dehydrogenase; Provisional	99.74
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.73
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.73
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.73
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.73
PRK05866	293	short chain dehydrogenase; Provisional	99.73
PRK08339	263	short chain dehydrogenase; Provisional	99.73
PRK06057	255	short chain dehydrogenase; Provisional	99.73
PRK07109	334	short chain dehydrogenase; Provisional	99.73
PRK07041	230	short chain dehydrogenase; Provisional	99.73
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.73
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08703	239	short chain dehydrogenase; Provisional	99.73
PRK07102	243	short chain dehydrogenase; Provisional	99.73
PRK12742	237	oxidoreductase; Provisional	99.72
PRK09072	263	short chain dehydrogenase; Provisional	99.72
PRK06139	330	short chain dehydrogenase; Provisional	99.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.72
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK07326	237	short chain dehydrogenase; Provisional	99.72
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.72
PRK08278	273	short chain dehydrogenase; Provisional	99.72
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.72
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.72
PRK05693	274	short chain dehydrogenase; Provisional	99.72
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.71
PRK07904	253	short chain dehydrogenase; Provisional	99.71
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.71
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.71
PRK08251	248	short chain dehydrogenase; Provisional	99.71
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.71
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.71
PRK06198	260	short chain dehydrogenase; Provisional	99.71
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.7
PRK06484	520	short chain dehydrogenase; Validated	99.7
PRK06172	253	short chain dehydrogenase; Provisional	99.7
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.7
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.7
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.69
PRK07791	286	short chain dehydrogenase; Provisional	99.69
PRK07062	265	short chain dehydrogenase; Provisional	99.69
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.69
PRK06125	259	short chain dehydrogenase; Provisional	99.68
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.68
PRK07023	243	short chain dehydrogenase; Provisional	99.68
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK05855	582	short chain dehydrogenase; Validated	99.68
PRK06924	251	short chain dehydrogenase; Provisional	99.68
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.67
PRK06940	275	short chain dehydrogenase; Provisional	99.67
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PLN02780	320	ketoreductase/ oxidoreductase	99.67
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.67
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK12367	245	short chain dehydrogenase; Provisional	99.66
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK07832	272	short chain dehydrogenase; Provisional	99.66
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.65
PRK06953	222	short chain dehydrogenase; Provisional	99.65
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK07201	657	short chain dehydrogenase; Provisional	99.64
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.64
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.63
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
PRK05884	223	short chain dehydrogenase; Provisional	99.63
PRK08177	225	short chain dehydrogenase; Provisional	99.62
PRK07578	199	short chain dehydrogenase; Provisional	99.62
KOG0725	270	consensus Reductases with broad range of substrate	99.62
PRK06484	520	short chain dehydrogenase; Validated	99.61
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.6
PRK08303	305	short chain dehydrogenase; Provisional	99.6
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.6
PRK08862	227	short chain dehydrogenase; Provisional	99.59
PRK05599	246	hypothetical protein; Provisional	99.58
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.57
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.57
KOG2774	366	consensus NAD dependent epimerase [General functio	99.55
PLN00015	308	protochlorophyllide reductase	99.55
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.54
KOG1208	314	consensus Dehydrogenases with different specificit	99.54
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.53
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.51
COG1028	251	FabG Dehydrogenases with different specificities (	99.5
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.48
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.48
COG2910	211	Putative NADH-flavin reductase [General function p	99.48
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.47
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.47
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.45
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.44
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.42
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.42
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.41
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.38
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.38
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.33
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.33
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.29
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.25
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.19
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.18
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.15
PTZ00325	321	malate dehydrogenase; Provisional	98.99
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.88
PLN00106	323	malate dehydrogenase	98.87
PRK06720	169	hypothetical protein; Provisional	98.83
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.76
PRK08309	177	short chain dehydrogenase; Provisional	98.63
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.62
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.59
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.52
PRK09620	229	hypothetical protein; Provisional	98.39
PRK05086	312	malate dehydrogenase; Provisional	98.31
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.28
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.26
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.22
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.21
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.09
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.02
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.97
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.94
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.93
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.91
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.88
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.86
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.85
PRK14982	340	acyl-ACP reductase; Provisional	97.83
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.82
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.77
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.76
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.73
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.73
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.72
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.7
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.67
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.57
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.55
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.54
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.49
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.46
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.44
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.41
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.41
PRK05442	326	malate dehydrogenase; Provisional	97.39
PLN02383	344	aspartate semialdehyde dehydrogenase	97.38
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.37
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.34
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.34
PTZ00117	319	malate dehydrogenase; Provisional	97.33
PRK06223	307	malate dehydrogenase; Reviewed	97.33
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.32
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.32
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.32
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.29
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.28
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.28
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.26
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.25
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.23
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.2
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.19
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.17
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.13
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	97.12
PRK04148	134	hypothetical protein; Provisional	97.12
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.11
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.1
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.08
PLN02602	350	lactate dehydrogenase	97.07
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.04
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.04
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.03
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.02
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.01
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.99
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.98
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.98
KOG2733	423	consensus Uncharacterized membrane protein [Functi	96.97
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.96
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.92
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.92
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.83
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.81
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.75
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.74
PRK08328	231	hypothetical protein; Provisional	96.72
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.72
COG3268	382	Uncharacterized conserved protein [Function unknow	96.71
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.7
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.7
PRK08223	287	hypothetical protein; Validated	96.69
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.69
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.66
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.66
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.65
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.6
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.6
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.57
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.55
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.54
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.53
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.52
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.5
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.49
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.45
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.45
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.44
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.41
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.4
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.36
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.35
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.29
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.26
PRK07411	390	hypothetical protein; Validated	96.25
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.25
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.24
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.22
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.2
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.19
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.19
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.18
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.16
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.14
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.11
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.04
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.01
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.01
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.0
TIGR01408	1008	Ube1 ubiquitin-activating enzyme E1. This model re	95.97
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.95
PRK08655	437	prephenate dehydrogenase; Provisional	95.93
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.91
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.89
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.86
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	95.84
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.83
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.8
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.79
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.78
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.76
PRK09496	453	trkA potassium transporter peripheral membrane com	95.75
PRK09496	453	trkA potassium transporter peripheral membrane com	95.73
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.73
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.69
PRK13243	333	glyoxylate reductase; Reviewed	95.66
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	95.63
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.62
PRK07574	385	formate dehydrogenase; Provisional	95.57
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	95.55
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.55
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.54
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.51
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.47
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.44
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.43
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.42
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.4
TIGR00036	266	dapB dihydrodipicolinate reductase.	95.38
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	95.36
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	95.36
PRK07877	722	hypothetical protein; Provisional	95.31
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.28
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.24
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.24
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.23
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	95.22
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.2
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.19
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.17
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.08
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.07
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.05
PRK06444	197	prephenate dehydrogenase; Provisional	95.01
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.01
KOG2018	430	consensus Predicted dinucleotide-utilizing enzyme	95.0
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.0
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.97
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.96
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.95
PRK14852	989	hypothetical protein; Provisional	94.94
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	94.91
PLN02928	347	oxidoreductase family protein	94.91
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	94.88
PLN00203	519	glutamyl-tRNA reductase	94.87
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.85
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.85
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.71
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.7
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.7
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.69
PRK14851	679	hypothetical protein; Provisional	94.69
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	94.65
PRK13303	265	L-aspartate dehydrogenase; Provisional	94.64
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	94.58
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.54
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.54
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	94.49
PRK07417	279	arogenate dehydrogenase; Reviewed	94.47
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	94.43
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.4
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	94.4
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	94.34
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.33
PRK12480	330	D-lactate dehydrogenase; Provisional	94.32
PRK10637	457	cysG siroheme synthase; Provisional	94.31
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	94.3
PRK08618	325	ornithine cyclodeaminase; Validated	94.27
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.27
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.26

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.5e-56  Score=431.89  Aligned_cols=338  Identities=82%  Similarity=1.227  Sum_probs=271.1

Q ss_pred             CCccccccCCCC-CCCCCCCCCCCCCCCCCccchhhHHHhhhhHHHHHHHHHHHHHHhhhcCCCCCCCCC-CCCCccccC
Q 019470            1 MGSELIYRGHDS-QLATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYG-GARGHVAIS   78 (340)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~   78 (340)
                      |+|||+||+++. ++.+++|+|||.|||.|++|+++|+++|||++|+++|++++++||++.|+++.+++. .+....+..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (442)
T PLN02206          1 MASELINRRHEETQPTADAYYPKPIKPWFVVTRPIRYMLREQRLVFVLVGIAIATLVFTIFPSSSQPSPYSVDPLSGYGI   80 (442)
T ss_pred             CCccccccCCCCCCCCCCCCCCCCCCCcccCccHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcCCCCcccccccccccc
Confidence            999999999954 778999999999999999999999999999999999999999999999886544321 000000000


Q ss_pred             CCCCCCchhhhhhccCCccc--ccccCCCCCCCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc
Q 019470           79 DSLSYYPVETYQRAYNPRVG--FGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN  156 (340)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~  156 (340)
                      +..... ....+..+..+..  .......+++|.+...++|+|||||||||||++|+++|+++|++|++++|......+.
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~  159 (442)
T PLN02206         81 RPDESY-VPAIQAQRKPSLEYLNRIGNSGGKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN  159 (442)
T ss_pred             cccccc-cccccceecccccccccccccCCcCccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh
Confidence            000000 0000111111110  0112446788999999999999999999999999999999999999998864433333


Q ss_pred             cccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          157 VMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       157 ~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      ........+++++.+|+.++.+.++|+|||+|+...+..+..++...+++|+.++.+++++|++.+++|||+||+.+||.
T Consensus       160 ~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~  239 (442)
T PLN02206        160 VMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  239 (442)
T ss_pred             hhhhccCCceEEEECCccChhhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCC
Confidence            32233445789999999999888999999999976655556678889999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeE
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  316 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~  316 (340)
                      ....+.+|+.|...+|..+.+.|+.+|..+|.+++.+.+.++++++++||+++|||++....+.++..++..+++++++.
T Consensus       240 ~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~  319 (442)
T PLN02206        240 PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  319 (442)
T ss_pred             CCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcE
Confidence            87778889887766777777899999999999999998888999999999999999865445667888999999999999


Q ss_pred             EecCCceeEccccHHHHHHHHHh
Q 019470          317 VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       317 ~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++++++.++|+|++|++++++.
T Consensus       320 i~g~G~~~rdfi~V~Dva~ai~~  342 (442)
T PLN02206        320 VYGDGKQTRSFQFVSDLVEGLMR  342 (442)
T ss_pred             EeCCCCEEEeEEeHHHHHHHHHH
Confidence            99999999999999999999875

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.6e-53  Score=410.16  Aligned_cols=332  Identities=68%  Similarity=1.082  Sum_probs=261.4

Q ss_pred             ccccCCCC-C-CCCCCCCCCCCCCCCCccchhhHHHhhhhHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCccccCCCCC
Q 019470            5 LIYRGHDS-Q-LATDSYSPKPIKPWFAVTQPIRYMLREQRLVFVLVGIAIATLFFTVIPTSYPASYGGARGHVAISDSLS   82 (340)
Q Consensus         5 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~   82 (340)
                      .+||+++. + +.++.|+|||.++++|++|+++|+++|||++|+++|++++++||++.|+++.+++..++.....+ ...
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   88 (436)
T PLN02166         10 VNHRRDEEIPTSQSSPYSPKTLKHPRSLPRSINYLFKEQRLLFILVGILIGSTFFILQPSLSRLGPAESTSLITRS-VSI   88 (436)
T ss_pred             ccccCCCCCCccccCCCCCCCCCCCccccchHHHHHHhhhHHHHHHHHHHHHHHHhhCCccccCCccccccccccc-ccc
Confidence            44555533 3 34899999976666999999999999999999999999999999999987644321111111110 000


Q ss_pred             CCchhhhhhccCCcccccccCCCCCCCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC
Q 019470           83 YYPVETYQRAYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG  162 (340)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~  162 (340)
                      ..........  ......+....+++|.+.+++.|+|||||||||||++|+++|+++|++|++++|..............
T Consensus        89 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~  166 (436)
T PLN02166         89 AVTDSPPSSS--TFNSSGGGGRTGRVPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG  166 (436)
T ss_pred             ccccCccchh--hccccccccccCCCCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc
Confidence            0000000000  00011123456799999999999999999999999999999999999999999864433333222223


Q ss_pred             CCceEEeeCcccccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCC
Q 019470          163 NPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       163 ~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~  242 (340)
                      ...++++..|+.++.+.++|+|||+|+......+..++...+++|+.|+.+++++|++.+++||++||++|||+....+.
T Consensus       167 ~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~  246 (436)
T PLN02166        167 NPRFELIRHDVVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQ  246 (436)
T ss_pred             CCceEEEECccccccccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCC
Confidence            35788999999998888999999999976655555678889999999999999999999899999999999998777788


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                      +|++|...+|..+.+.|+.+|..+|.+++.+.+.++++++++||+++||+++....+.++..++..+++++++.++++++
T Consensus       247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~  326 (436)
T PLN02166        247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGK  326 (436)
T ss_pred             CccccccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCC
Confidence            89877666777788899999999999999998888999999999999999865445677888999999999999999999


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      +.++|+|++|++++++.
T Consensus       327 ~~rdfi~V~Dva~ai~~  343 (436)
T PLN02166        327 QTRSFQYVSDLVDGLVA  343 (436)
T ss_pred             eEEeeEEHHHHHHHHHH
Confidence            99999999999999875

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.9e-43  Score=305.51  Aligned_cols=227  Identities=79%  Similarity=1.261  Sum_probs=220.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      ..+++|+||||.||||+||+++|..+|++|+++|....+.+.++........++++..|+..+.+.++|.|||+|+++++
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp  104 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP  104 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence            34579999999999999999999999999999999999999999888889999999999999999999999999999999


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY  273 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~  273 (340)
                      .++..++.+.+..|+.++++++..|++.++||++.||+.|||++..+|..|++|.+..|.++..+|+..|..+|.++..|
T Consensus       105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y  184 (350)
T KOG1429|consen  105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY  184 (350)
T ss_pred             cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          274 HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       274 ~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      .++.|+.+.|.|++++|||+++.++++++..|..+.+++++++++|+|.|+|+|+||+|++++++++
T Consensus       185 ~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~L  251 (350)
T KOG1429|consen  185 HKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRL  251 (350)
T ss_pred             hcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999998864

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.5e-35  Score=278.92  Aligned_cols=223  Identities=28%  Similarity=0.379  Sum_probs=182.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc------ccCCCceEEeeCccccc-----ccCC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPNFELIRHDVVEP-----LLLE  180 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~------~~~~~~~~~~~~D~~~~-----~~~~  180 (340)
                      ..+++|+|||||||||||++|+++|+++|++|++++|........+..      .....++.++.+|+.+.     .+.+
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~   90 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN   90 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence            356778999999999999999999999999999999864432211110      01113577888998764     3568


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      +|+|||+|+.........++...+++|+.|+.+++++|++.++ +|||+||+++||...+.+..|+     .+..|.+.|
T Consensus        91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y  165 (348)
T PRK15181         91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RIGRPLSPY  165 (348)
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CCCCCCChh
Confidence            9999999997654445566778899999999999999999997 8999999999997666666665     344566889


Q ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHH
Q 019470          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      +.+|..+|.+++.+.+.++++++++||+++|||+...+  ...+++.++..+++++++.++++|++.++|+|++|+|+++
T Consensus       166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~  245 (348)
T PRK15181        166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN  245 (348)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence            99999999999998888899999999999999986432  1347788888889999999999999999999999999997


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      ++
T Consensus       246 ~~  247 (348)
T PRK15181        246 LL  247 (348)
T ss_pred             HH
Confidence            64

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.7e-35  Score=257.85  Aligned_cols=215  Identities=32%  Similarity=0.516  Sum_probs=182.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc-------CCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~D~Vih~Ag  189 (340)
                      |+||||||+||||+|.+.+|++.|++|+++|+......+.+...    ...++.+|+.|..+       .++|.|||+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa   76 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAA   76 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence            58999999999999999999999999999999876665555332    16888999988643       36999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      .........+|.++++.|+.||++|+++|++.++ +|||-||+.|||.+...|++|+     .+..|.++||.||.+.|+
T Consensus        77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-----~~~~p~NPYG~sKlm~E~  151 (329)
T COG1087          77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-----SPLAPINPYGRSKLMSEE  151 (329)
T ss_pred             ccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-----CCCCCCCcchhHHHHHHH
Confidence            8877778889999999999999999999999998 8999999999999999999999     788888999999999999


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCC-------CCccHHHHHHHHHHhCC-CeEEec------CCceeEccccHHHHH
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCI-------DDGRVVSNFVAQALRKE-PLTVYG------DGKQTRSFQFVSDLV  334 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~------~g~~~~~~v~v~Dva  334 (340)
                      +++.+.+.++++++++|-+++.|.....       +....++....-++... .+.++|      ||...||||||.|+|
T Consensus       152 iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA  231 (329)
T COG1087         152 ILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLA  231 (329)
T ss_pred             HHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHH
Confidence            9999999999999999999999965321       11334555555555443 477777      578899999999999


Q ss_pred             HHHHhC
Q 019470          335 RLTETI  340 (340)
Q Consensus       335 ~a~~~~  340 (340)
                      ++++++
T Consensus       232 ~aH~~A  237 (329)
T COG1087         232 DAHVLA  237 (329)
T ss_pred             HHHHHH
Confidence            998763

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.8e-33  Score=244.66  Aligned_cols=216  Identities=33%  Similarity=0.517  Sum_probs=189.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCC-CCcccccccccCCCceEEeeCccccccc-----C--CCCEEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPLL-----L--EVDQIYH  186 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~-----~--~~D~Vih  186 (340)
                      |++|||||+||||+.+++.++++..  +|+++|... .++.+.+......++..++++|+.+..+     .  ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            5899999999999999999999854  578887653 3344555555566799999999987532     2  5999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCC--CCCCCCCCCCCCCCCCChHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQH--PQKETYWGNVNPIGVRSCYDEG  262 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~--~~~E~~~~~~~~~~~~~~Y~~s  262 (340)
                      .|+-.+....-.++..++++|+.||.+|++++++...  ||+++||..|||+-...  ..+|.     +|..|.++|++|
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~-----tp~~PsSPYSAS  155 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTET-----TPYNPSSPYSAS  155 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccC-----CCCCCCCCcchh
Confidence            9998887777788999999999999999999999984  99999999999986543  56676     899999999999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |+++..+++.+.+.+|++++|.|+++-|||.+  ....+++.++..++.|++++++|+|.+.|||+||+|-++++..
T Consensus       156 KAasD~lVray~~TYglp~~ItrcSNNYGPyq--fpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~  230 (340)
T COG1088         156 KAASDLLVRAYVRTYGLPATITRCSNNYGPYQ--FPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDL  230 (340)
T ss_pred             hhhHHHHHHHHHHHcCCceEEecCCCCcCCCc--CchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHH
Confidence            99999999999999999999999999999987  5688999999999999999999999999999999999999864

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=2.4e-32  Score=264.15  Aligned_cols=226  Identities=29%  Similarity=0.339  Sum_probs=171.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc----------------cccc--ccCCCceEEeeCccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE----------------NVMH--HFGNPNFELIRHDVV  174 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~----------------~~~~--~~~~~~~~~~~~D~~  174 (340)
                      ..++|+||||||+||||++|+++|+++|++|+++++.......                .+..  .....+++++.+|+.
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            4677899999999999999999999999999999864221100                0000  001235788999987


Q ss_pred             ccc-----cC--CCCEEEEcccCCCCCCCcCC---hhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCC
Q 019470          175 EPL-----LL--EVDQIYHLACPASPVHYKFN---PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       175 ~~~-----~~--~~D~Vih~Ag~~~~~~~~~~---~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~  242 (340)
                      +..     +.  ++|+|||+|+.........+   +...+++|+.|+.+++++|++.++  +||++||..+||... .+.
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~  202 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDI  202 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCC
Confidence            752     23  58999999976443222222   345678999999999999999885  799999999999643 233


Q ss_pred             CCCCCC-------C--CCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC------------C---
Q 019470          243 KETYWG-------N--VNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID------------D---  298 (340)
Q Consensus       243 ~E~~~~-------~--~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~------------~---  298 (340)
                      +|....       +  ..+..|.+.|+.+|.++|.+++.+++.+|++++++||+++|||+....            +   
T Consensus       203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~  282 (442)
T PLN02572        203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVF  282 (442)
T ss_pred             cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccch
Confidence            333110       0  125566789999999999999999888899999999999999985321            0   


Q ss_pred             ccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          299 GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ..++..++..+.+++++.++|+|++.+||+||+|++++++.
T Consensus       283 ~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~  323 (442)
T PLN02572        283 GTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEI  323 (442)
T ss_pred             hhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHH
Confidence            24567778888889889899999999999999999999875

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=2.3e-32  Score=257.31  Aligned_cols=220  Identities=23%  Similarity=0.357  Sum_probs=176.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCccc-cc-----ccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EP-----LLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~-----~~~~~D~Vih~A  188 (340)
                      ||+|||||||||||++|+++|+++ |++|++++|......    .......++++.+|+. +.     .+.++|+|||+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a   76 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLV   76 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----HhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence            468999999999999999999987 699999998542211    1112245888889986 32     345799999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCC-CCCC-CCCCChHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNP-IGVRSCYDEGKRTA  266 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~-~~~~-~~~~~~Y~~sK~~~  266 (340)
                      +...+.....++...+++|+.++.+++++|++.+.+|||+||+.+||.....+.+|++.. ...+ ..+.+.|+.+|..+
T Consensus        77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~  156 (347)
T PRK11908         77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLM  156 (347)
T ss_pred             ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHH
Confidence            976554456678888999999999999999998889999999999997655566666421 1112 24557899999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCC------CCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCI------DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |++++.+..+++++++++||+++|||+...      ...+++..++..+.+++++.+++++++.++|+|++|++++++.
T Consensus       157 e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~  235 (347)
T PRK11908        157 DRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMK  235 (347)
T ss_pred             HHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHH
Confidence            999999988889999999999999997532      1245778888889999998888889999999999999999875

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.7e-32  Score=260.44  Aligned_cols=227  Identities=27%  Similarity=0.389  Sum_probs=172.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccc--cCCCceEEeeCccccc-----ccCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEP-----LLLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~-----~~~~~D~V  184 (340)
                      +.+.|+|||||||||||++|+++|+++ |++|++++|............  ....+++++.+|+.+.     .+.++|+|
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~V   90 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLT   90 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEE
Confidence            456789999999999999999999999 599999998643221111000  0123688889998764     35579999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCC-----------CCC-
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN-----------VNP-  252 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~-----------~~~-  252 (340)
                      ||+|+......+..++...+..|+.++.+++++|++.+.+|||+||.++||.....+..|+....           ..+ 
T Consensus        91 iHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~  170 (386)
T PLN02427         91 INLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC  170 (386)
T ss_pred             EEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence            99999755434444566677899999999999999888899999999999975433333321100           000 


Q ss_pred             -----CCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC---------CccHHHHHHHHHHhCCCeEEe
Q 019470          253 -----IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID---------DGRVVSNFVAQALRKEPLTVY  318 (340)
Q Consensus       253 -----~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~  318 (340)
                           ..+.+.|+.+|..+|.+++.+++.++++++++||++||||+....         ...++..++..+++++++.++
T Consensus       171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  250 (386)
T PLN02427        171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLV  250 (386)
T ss_pred             ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEE
Confidence                 123468999999999999998887899999999999999975310         123566677788889999889


Q ss_pred             cCCceeEccccHHHHHHHHHh
Q 019470          319 GDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       319 ~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++++.++|+||+|++++++.
T Consensus       251 g~g~~~r~~i~V~Dva~ai~~  271 (386)
T PLN02427        251 DGGQSQRTFVYIKDAIEAVLL  271 (386)
T ss_pred             CCCCceECcEeHHHHHHHHHH
Confidence            999999999999999999875

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=6.2e-32  Score=239.90  Aligned_cols=213  Identities=36%  Similarity=0.553  Sum_probs=178.6

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEEcccCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLACPA  191 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~Ag~~  191 (340)
                      |||||||||||++|+++|+++|+.|+.+.|...........    .++.++..|+.+.     .+.  ++|+|||+|+..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence            79999999999999999999999999998865443222111    1677888888764     222  469999999864


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                      .......+....++.|+.++.+++++|++.++ +||++||+.+|+.....+.+|+     .+..+.+.|+.+|...|+++
T Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~~~~~~Y~~~K~~~e~~~  151 (236)
T PF01370_consen   77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPINPLSPYGASKRAAEELL  151 (236)
T ss_dssp             SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGCCHSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccccc
Confidence            31122356788999999999999999999998 9999999999999877777888     45577788999999999999


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCC-CCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPR-MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      +.+.++++++++++||+++||+. .......++..++..+.+++++.+++++++.++|+|++|++++++.+
T Consensus       152 ~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  222 (236)
T PF01370_consen  152 RDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAA  222 (236)
T ss_dssp             HHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHH
Confidence            99998889999999999999998 22346788899999999999999999999999999999999998753

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.8e-32  Score=247.62  Aligned_cols=210  Identities=30%  Similarity=0.379  Sum_probs=161.2

Q ss_pred             EEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEcccCCC
Q 019470          120 VVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLACPAS  192 (340)
Q Consensus       120 lVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~Ag~~~  192 (340)
                      |||||+||||++|+++|+++|  ++|+++++.........  .......+++.+|+.+     +++.++|+|||+|++..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~--~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKD--LQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchh--hhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            699999999999999999999  69999998654432111  1111233377888866     46789999999999754


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCC-CCCCC---CCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQ---KETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~-~~~~~---~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      ... ....+.++++|+.||.|++++|++.++ +|||+||.++++++ ...++   +|..+   .+..+...|+.||+.+|
T Consensus        79 ~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~---~~~~~~~~Y~~SK~~AE  154 (280)
T PF01073_consen   79 PWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP---YPSSPLDPYAESKALAE  154 (280)
T ss_pred             ccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc---ccccccCchHHHHHHHH
Confidence            322 456778999999999999999999998 89999999988762 22232   23321   23335678999999999


Q ss_pred             HHHHHHHH---h--hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          268 TLTMDYHR---G--AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~---~--~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++.++..   +  ..+.+++|||..||||+.    ..+.+.+...+..+......++++...+++||+|+|.++++
T Consensus       155 ~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d----~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvl  227 (280)
T PF01073_consen  155 KAVLEANGSELKNGGRLRTCALRPAGIYGPGD----QRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVL  227 (280)
T ss_pred             HHHHhhcccccccccceeEEEEeccEEeCccc----ccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHH
Confidence            99998865   1  259999999999999963    34555666666667677778888899999999999999875

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2.3e-31  Score=269.66  Aligned_cols=223  Identities=24%  Similarity=0.408  Sum_probs=181.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vi  185 (340)
                      -.++|+|||||||||||++|+++|+++ |++|++++|.......    .....+++++.+|+.+.      .+.++|+||
T Consensus       312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~Vi  387 (660)
T PRK08125        312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLGHPRFHFVEGDISIHSEWIEYHIKKCDVVL  387 (660)
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcCCCceEEEeccccCcHHHHHHHhcCCCEEE
Confidence            346789999999999999999999986 7999999986532211    11224678888898652      356899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCC-CCCC-CCCChHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN-VNPI-GVRSCYDEGK  263 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~-~~~~-~~~~~Y~~sK  263 (340)
                      |+||...+..+..++...+++|+.++.+++++|++.+.+|||+||.++||.....+.+|+.+.. ..+. .+.+.|+.+|
T Consensus       388 HlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK  467 (660)
T PRK08125        388 PLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSK  467 (660)
T ss_pred             ECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHH
Confidence            9999766555566777889999999999999999998899999999999976556677775421 1222 3457899999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC------CccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHH
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID------DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      ..+|.+++.+.+.++++++++||+++|||+....      ...++..++..+.+++++.+++++++.++|+|++|+++++
T Consensus       468 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~  547 (660)
T PRK08125        468 QLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEAL  547 (660)
T ss_pred             HHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHH
Confidence            9999999999888899999999999999975321      2356788888888899998889999999999999999998


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      ++
T Consensus       548 ~~  549 (660)
T PRK08125        548 FR  549 (660)
T ss_pred             HH
Confidence            65

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.98  E-value=7.6e-31  Score=247.55  Aligned_cols=217  Identities=31%  Similarity=0.466  Sum_probs=168.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEE-EeCCCCCcc-cccccccCCCceEEeeCccccc-----ccC--CCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFTGRK-ENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih  186 (340)
                      |++|||||||||||++|++.|+++|++|++ +++...... ..+........++++.+|+.+.     .+.  ++|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            468999999999999999999999987554 444322111 1111111123567788888764     233  4899999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeCcccccCCC--CCCCCCCCCCCCCCCC
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---------GA-RFLLTSTSEVYGDPL--QHPQKETYWGNVNPIG  254 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---------~~-~~i~~SS~~v~g~~~--~~~~~E~~~~~~~~~~  254 (340)
                      +||........+++...+++|+.|+.+++++|++.         ++ +||++||.++||...  ..+++|+     .+..
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~~~  155 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TPYA  155 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CCCC
Confidence            99975433334467889999999999999999863         33 899999999998642  3456666     4556


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV  334 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva  334 (340)
                      +.+.|+.+|.++|.+++.++++.+++++++||+++|||+..  ...++..++..+.+++++.+++++++.++|+|++|++
T Consensus       156 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a  233 (355)
T PRK10217        156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHF--PEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHA  233 (355)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC--cccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHH
Confidence            67899999999999999998888999999999999999852  3457778888888888888899999999999999999


Q ss_pred             HHHHh
Q 019470          335 RLTET  339 (340)
Q Consensus       335 ~a~~~  339 (340)
                      +++..
T Consensus       234 ~a~~~  238 (355)
T PRK10217        234 RALYC  238 (355)
T ss_pred             HHHHH
Confidence            99875

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.98  E-value=5.5e-31  Score=249.77  Aligned_cols=217  Identities=29%  Similarity=0.417  Sum_probs=167.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag  189 (340)
                      ++|+|||||||||||++|++.|+++|++|++++|........     .....+++.+|+.+.     .+.++|+|||+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-----DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-----ccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            567999999999999999999999999999999854221110     011245667777653     3568999999998


Q ss_pred             CCCCCC-CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCC----CCCCCCCCCCCCCCCCChHHHHH
Q 019470          190 PASPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH----PQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       190 ~~~~~~-~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~----~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      ...... ...++...+..|+.++.+++++|++.++ +|||+||.++|+.....    +..|++   ..+..|.+.|+.+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~---~~p~~p~s~Yg~sK  171 (370)
T PLN02695         95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESD---AWPAEPQDAYGLEK  171 (370)
T ss_pred             ccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCccc---CCCCCCCCHHHHHH
Confidence            643222 2234556678999999999999999987 89999999999865321    344432   12566778999999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHh-CCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ..+|.+++.+.+.++++++++||+++|||+.....  ..+...|+..+.+ +.++.+++++++.++|+|++|++++++.
T Consensus       172 ~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~  250 (370)
T PLN02695        172 LATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR  250 (370)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence            99999999998888999999999999999754322  2345677777766 4788889999999999999999999865

>PLN02214 cinnamoyl-CoA reductase

Probab=99.98  E-value=7.8e-31  Score=246.33  Aligned_cols=217  Identities=22%  Similarity=0.329  Sum_probs=163.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .++|+|+||||+||||++|+++|+++|++|++++|............+  ...+++++.+|+.+.     .+.++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            356799999999999999999999999999999986543211111111  113577888888663     4568999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCc-ccccCCCC---CCCCCCCCCCCC-CCCCCChHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPLQ---HPQKETYWGNVN-PIGVRSCYD  260 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~-~v~g~~~~---~~~~E~~~~~~~-~~~~~~~Y~  260 (340)
                      +|+..     ..++...+++|+.++.+++++|++.++ +||++||. .+||....   .+++|++|.+.. +..+.+.|+
T Consensus        88 ~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         88 TASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             ecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            99863     235778899999999999999999987 89999995 68975432   347888775433 445668999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|..+|.+++.+.++++++++++||++||||+........+..++ .++.++... ++  ++.++|+||+|+|++++.
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~  237 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-YA--NLTQAYVDVRDVALAHVL  237 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-CC--CCCcCeeEHHHHHHHHHH
Confidence            9999999999999888899999999999999985432222233333 344554432 33  457899999999999875

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=9.8e-31  Score=245.79  Aligned_cols=218  Identities=24%  Similarity=0.267  Sum_probs=169.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-cccccc---c---CCCceEEeeCcccccc-----cC--CCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHH---F---GNPNFELIRHDVVEPL-----LL--EVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~---~---~~~~~~~~~~D~~~~~-----~~--~~D  182 (340)
                      |+||||||+||||++|+++|+++|++|++++|...... +.+...   .   ...+++++.+|+.+..     +.  ++|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999998753211 111110   0   1235788889987742     33  479


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC----eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~----~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      +|||+|+.........++...+++|+.|+.+++++|++.++    +|||+||+++||.....+.+|+     .+..|.+.
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~  155 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPFYPRSP  155 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCCCCCCh
Confidence            99999997654333445667788999999999999998773    7999999999997666667776     56677889


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      |+.||..+|.+++.++++++++++..|+.++|||+...+ -...+..++..+..+++ ...+|++++.++|+||+|++++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a  235 (343)
T TIGR01472       156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA  235 (343)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence            999999999999999888899999999999999974221 12344556666666764 4556899999999999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       236 ~~~  238 (343)
T TIGR01472       236 MWL  238 (343)
T ss_pred             HHH
Confidence            875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.97  E-value=1.2e-30  Score=245.85  Aligned_cols=218  Identities=22%  Similarity=0.280  Sum_probs=170.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----cC--CCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~--~~D~Vih~  187 (340)
                      ++|+||||||+||||+++++.|+++|++|++++|+...............++.++.+|+.+..     +.  ++|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            467999999999999999999999999999999875533221110001124667788887642     22  47999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCC-CCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-HPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      ||.........++...+++|+.++.+++++|++.+ + +||++||..+|+.... .+..|+     .+..|.+.|+.+|.
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~~~p~~~Y~~sK~  157 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DPLGGHDPYSSSKA  157 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CCCCCCCcchhHHH
Confidence            99654434455678899999999999999999876 4 8999999999986432 345555     45566789999999


Q ss_pred             HHHHHHHHHHHhh-------CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHH
Q 019470          265 TAETLTMDYHRGA-------GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       265 ~~E~~v~~~~~~~-------gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      ++|.+++.+++++       +++++++||+++|||+.. ....+++.++..+.+++++.+ +++++.++|+|++|+++++
T Consensus       158 ~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~-~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~  235 (349)
T TIGR02622       158 CAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDW-AEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGY  235 (349)
T ss_pred             HHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcc-hhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHH
Confidence            9999999887654       899999999999999742 234677888888888877764 6789999999999999998


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      +.
T Consensus       236 ~~  237 (349)
T TIGR02622       236 LL  237 (349)
T ss_pred             HH
Confidence            74

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=1.2e-30  Score=235.79  Aligned_cols=221  Identities=20%  Similarity=0.242  Sum_probs=167.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc--cccccc-CCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHF-GNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~--~~~~~~-~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .+++|+||||+||||+||++.||++||.|++.+|+++..+.  .+.+.- ...++.++..|+.+.     ++.+||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            56799999999999999999999999999999998765332  222221 234578888888664     6789999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccC-----CCCCCCCCCCCCCCCCC-CCCCh
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGD-----PLQHPQKETYWGNVNPI-GVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~-----~~~~~~~E~~~~~~~~~-~~~~~  258 (340)
                      +|.+......+ ...++++.++.|+.|++++|++.+ + |+|++||++....     ..+..++|+.|.+.+-. .....
T Consensus        85 ~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~  163 (327)
T KOG1502|consen   85 TASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW  163 (327)
T ss_pred             eCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence            99875443322 345899999999999999999999 5 9999999654332     23567899999764432 12378


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      |..+|..+|+..++++++.+++.+.+.|+.|+||...+. -..-...+..+++|..-.. .  +....||||+|||.+++
T Consensus       164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~-l~~s~~~~l~~i~G~~~~~-~--n~~~~~VdVrDVA~AHv  239 (327)
T KOG1502|consen  164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPS-LNSSLNALLKLIKGLAETY-P--NFWLAFVDVRDVALAHV  239 (327)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccc-cchhHHHHHHHHhcccccC-C--CCceeeEeHHHHHHHHH
Confidence            999999999999999999999999999999999986542 2222345555666643222 1  23345999999999987


Q ss_pred             hC
Q 019470          339 TI  340 (340)
Q Consensus       339 ~~  340 (340)
                      .+
T Consensus       240 ~a  241 (327)
T KOG1502|consen  240 LA  241 (327)
T ss_pred             HH
Confidence            63

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.97  E-value=5.7e-30  Score=240.11  Aligned_cols=224  Identities=20%  Similarity=0.258  Sum_probs=162.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc--cccccCCCceEEeeCccccc-----ccCCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHFGNPNFELIRHDVVEP-----LLLEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vi  185 (340)
                      +.++++||||||+||||++|+++|+++|++|++++|........  ........++.++.+|+.++     .+.++|+||
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            45678999999999999999999999999999998865332110  00111112577888888764     346799999


Q ss_pred             EcccCCCCCCCcCCh-hhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccccCCC----CCCCCCCCCCCC----CCCC
Q 019470          186 HLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPL----QHPQKETYWGNV----NPIG  254 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~-~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~g~~~----~~~~~E~~~~~~----~~~~  254 (340)
                      |+|+...  ....++ ..++++|+.++.+++++|.+. ++ +|||+||.++|+...    ..+.+|+.|...    .+..
T Consensus        86 h~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T PLN00198         86 HVATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKP  163 (338)
T ss_pred             EeCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCC
Confidence            9998632  122233 456799999999999999886 45 899999999998532    335667655321    2234


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEec-CCce----eEcccc
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG-DGKQ----TRSFQF  329 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~----~~~~v~  329 (340)
                      |.+.|+.+|..+|.+++.++++++++++++||++||||+.......++. ++..+++++++.+.+ ++.+    .++|+|
T Consensus       164 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~  242 (338)
T PLN00198        164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITH  242 (338)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeE
Confidence            6678999999999999999888899999999999999975322223332 334566666665555 2322    379999


Q ss_pred             HHHHHHHHHh
Q 019470          330 VSDLVRLTET  339 (340)
Q Consensus       330 v~Dva~a~~~  339 (340)
                      |+|++++++.
T Consensus       243 V~D~a~a~~~  252 (338)
T PLN00198        243 VEDVCRAHIF  252 (338)
T ss_pred             HHHHHHHHHH
Confidence            9999999875

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.97  E-value=7.2e-30  Score=239.61  Aligned_cols=221  Identities=23%  Similarity=0.267  Sum_probs=170.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-cccccc-----cCCCceEEeeCcccccc-----cC--
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHH-----FGNPNFELIRHDVVEPL-----LL--  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~-----~~~~~~~~~~~D~~~~~-----~~--  179 (340)
                      +.++|+||||||+||||++|+++|+++|++|++++|...... ..+...     .....+.++.+|+.+..     +.  
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            345779999999999999999999999999999998643211 111110     01235788888987642     22  


Q ss_pred             CCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC------eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA------RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~------~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      ++|+|||+||.........++...+++|+.|+.+++++|++.++      +||++||.++||.... +.+|+     .+.
T Consensus        83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-----~~~  156 (340)
T PLN02653         83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPF  156 (340)
T ss_pred             CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-----CCC
Confidence            47999999997554334456777889999999999999998873      7999999999997654 66676     566


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCCCeEE-ecCCceeEccccHH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTV-YGDGKQTRSFQFVS  331 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~v~v~  331 (340)
                      .|.+.|+.+|.++|.+++.+++++++.++..|+.++|||+...+. ...+..++..+.++++..+ +|++++.++|+|++
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~  236 (340)
T PLN02653        157 HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAG  236 (340)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHH
Confidence            777899999999999999998888999999999999999742211 2234455566667766544 58899999999999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |++++++.
T Consensus       237 D~a~a~~~  244 (340)
T PLN02653        237 DYVEAMWL  244 (340)
T ss_pred             HHHHHHHH
Confidence            99999875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.97  E-value=6.5e-30  Score=259.98  Aligned_cols=218  Identities=30%  Similarity=0.469  Sum_probs=173.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCc-ccccccccCCCceEEeeCcccccc-------cCCCCEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPL-------LLEVDQI  184 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~-------~~~~D~V  184 (340)
                      ++|+|||||||||||++|+++|+++  |++|+++++..... ...+.......+++++.+|+.+..       ..++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            4579999999999999999999998  67999998743111 111111112246888889987642       1479999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCC---CCCCCCCCCCCCCCChH
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQ---KETYWGNVNPIGVRSCY  259 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~---~E~~~~~~~~~~~~~~Y  259 (340)
                      ||+|+.........++...+++|+.++.+++++|++.+ + +|||+||..+||.....+.   .|+     .+..|.+.|
T Consensus        85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-----~~~~p~~~Y  159 (668)
T PLN02260         85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-----SQLLPTNPY  159 (668)
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-----CCCCCCCCc
Confidence            99999765443344567788999999999999999987 5 8999999999997654321   333     455577889


Q ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +.+|..+|.+++.+.++++++++++||++|||++.  ....++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       160 ~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~--~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~  237 (668)
T PLN02260        160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEV  237 (668)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC--CcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHH
Confidence            99999999999999888899999999999999975  2345777888888888899999999999999999999999875

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.97  E-value=1.2e-29  Score=239.12  Aligned_cols=216  Identities=30%  Similarity=0.473  Sum_probs=166.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCC-CcccccccccCCCceEEeeCccccc-----ccC--CCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~  187 (340)
                      |+|||||||||||++|+++|+++|++ |+++++... ..............+.++.+|+.+.     .+.  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            48999999999999999999999975 666665321 1111111111123567788888764     232  58999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeCcccccCCCC----------CCCCCCCC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---------GA-RFLLTSTSEVYGDPLQ----------HPQKETYW  247 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---------~~-~~i~~SS~~v~g~~~~----------~~~~E~~~  247 (340)
                      ||.........++..++++|+.|+.+++++|++.         ++ +||++||.++||....          .+.+|+  
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~--  158 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET--  158 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc--
Confidence            9975433334567889999999999999999874         33 8999999999986321          123444  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .+..|.+.|+.+|.++|.+++.++++++++++++|++.+|||+.  ....++..++..+.+++++.+++++++.++|
T Consensus       159 ---~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (352)
T PRK10084        159 ---TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH--FPEKLIPLVILNALEGKPLPIYGKGDQIRDW  233 (352)
T ss_pred             ---CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc--CccchHHHHHHHHhcCCCeEEeCCCCeEEee
Confidence               56677789999999999999999888899999999999999974  2345677788888888888889999999999


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      +|++|++++++.
T Consensus       234 v~v~D~a~a~~~  245 (352)
T PRK10084        234 LYVEDHARALYK  245 (352)
T ss_pred             EEHHHHHHHHHH
Confidence            999999999864

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.97  E-value=7.1e-30  Score=235.50  Aligned_cols=198  Identities=21%  Similarity=0.176  Sum_probs=158.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPV  194 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~  194 (340)
                      |+||||||+||||++++++|+++| +|++++|....           ...|+.+.+...+.+.  ++|+|||+|+.....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~-----------~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~   68 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD-----------YCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD   68 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccccc-----------ccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence            489999999999999999999999 79999874210           1123333322333344  589999999987655


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  274 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~  274 (340)
                      .++.++...+++|+.++.+++++|++.+++|||+||..|||.....|.+|+     ++..|.+.|+.+|..+|++++.+.
T Consensus        69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~~~P~~~Yg~sK~~~E~~~~~~~  143 (299)
T PRK09987         69 KAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DATAPLNVYGETKLAGEKALQEHC  143 (299)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CCCCCCCHHHHHHHHHHHHHHHhC
Confidence            566677888899999999999999999999999999999988766678887     566777899999999999987653


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecC--CceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD--GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~v~v~Dva~a~~~  339 (340)
                          .+++++|++++|||+.    ..++..++..+.+++++.++++  +.+.+++.++||+++++..
T Consensus       144 ----~~~~ilR~~~vyGp~~----~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~  202 (299)
T PRK09987        144 ----AKHLIFRTSWVYAGKG----NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRV  202 (299)
T ss_pred             ----CCEEEEecceecCCCC----CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHH
Confidence                4679999999999963    3567788888888888998888  6777777778888887654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.97  E-value=1.1e-29  Score=235.15  Aligned_cols=210  Identities=21%  Similarity=0.318  Sum_probs=154.2

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEee---C-ccccccc-----CCCCEEEEccc
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIR---H-DVVEPLL-----LEVDQIYHLAC  189 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~---~-D~~~~~~-----~~~D~Vih~Ag  189 (340)
                      ||||||+||||++|+++|+++|++|+++.|+...... ....   ..+++.+   . ++.+..+     .++|+|||+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~   77 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL---VDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA   77 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-HHhh---hhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence            7999999999999999999999977766554322111 0000   1112211   1 1122222     36999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      .....  ..+....++.|+.++.+++++|++.+++|||+||.++||.....+..|.     .+..|.+.|+.+|..+|++
T Consensus        78 ~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  150 (308)
T PRK11150         78 CSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEER-----EYEKPLNVYGYSKFLFDEY  150 (308)
T ss_pred             ecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccC-----CCCCCCCHHHHHHHHHHHH
Confidence            54332  2245567899999999999999999989999999999997655455555     4556678899999999999


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEe-cCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVY-GDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.+..+.+++++++||+++||++.....  ..++..+...+.+++...++ ++++..++|+|++|++++++.
T Consensus       151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~  223 (308)
T PRK11150        151 VRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLW  223 (308)
T ss_pred             HHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHH
Confidence            99998878999999999999999753211  22344566777777765555 566788999999999999764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.97  E-value=3.3e-29  Score=231.89  Aligned_cols=215  Identities=35%  Similarity=0.547  Sum_probs=170.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcc-cccccccCCCceEEeeCccccc-----ccCC--CCEEEEc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEP-----LLLE--VDQIYHL  187 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~~--~D~Vih~  187 (340)
                      +|+|||||||||.+++++|+++|  ++|++++|...... +.........+++++.+|+.++     .+.+  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999987  68999887432111 1111111223577888888764     2344  8999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC--CeEEEEeCcccccCCCCC-CCCCCCCCCCCCCCCCChHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQH-PQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~--~~~i~~SS~~v~g~~~~~-~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      |+.........++...+++|+.++.+++++|++.+  +++|++||..+||..... +.+|.     .+..+.+.|+.+|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~  155 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPLAPSSPYSASKA  155 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCCCCCCchHHHHH
Confidence            98754434445677889999999999999999864  489999999999875433 45665     45566688999999


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++.++.+.+++++++||+.+||+..  ....++..++..+.+++++.+++++++.++|+|++|+++++..
T Consensus       156 ~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~  228 (317)
T TIGR01181       156 ASDHLVRAYHRTYGLPALITRCSNNYGPYQ--FPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYL  228 (317)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCC--CcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHH
Confidence            999999999888899999999999999975  2356788888888888888888999999999999999999875

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=4.1e-29  Score=231.10  Aligned_cols=212  Identities=38%  Similarity=0.540  Sum_probs=164.0

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCC-CEEEEcccCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEV-DQIYHLACPA  191 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~-D~Vih~Ag~~  191 (340)
                      +|||||||||||++|+++|+++|++|++++|.........      ..++++.+|+.+     ....++ |+|||+|+..
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~   75 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQS   75 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEccccC
Confidence            5999999999999999999999999999999755443322      344555555544     344456 9999999976


Q ss_pred             CCCCCcC-ChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCC-CCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          192 SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       192 ~~~~~~~-~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~-~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      ....... ++...+++|+.++.+++++|++.++ +|||.||.++|+.. ...+.+|+.    .+..|.+.|+.+|+.+|.
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~~Yg~sK~~~E~  151 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLNPYGVSKLAAEQ  151 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCCHHHHHHHHHHH
Confidence            5433323 3556899999999999999999776 89998887777655 333566663    344555589999999999


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCCCCc-cHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHHHHHHh
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDG-RVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .++.+.+.++++++++||+++|||+...... .+...++..+.++.+ ....+++.+.++++|++|++++++.
T Consensus       152 ~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  224 (314)
T COG0451         152 LLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL  224 (314)
T ss_pred             HHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHH
Confidence            9999988789999999999999998543322 355566667777776 6667788888999999999998875

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.97  E-value=5.6e-29  Score=234.80  Aligned_cols=225  Identities=18%  Similarity=0.191  Sum_probs=155.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~A  188 (340)
                      ..+|+||||||+||||++++++|+++|++|++++|+...............+++++.+|+.+.     .+.++|+|||+|
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            456799999999999999999999999999999886433221111111124678888888764     345799999999


Q ss_pred             cCCCCCC--CcCChh-----hHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCC-----CCCCCCCCCCCC---
Q 019470          189 CPASPVH--YKFNPV-----KTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-----HPQKETYWGNVN---  251 (340)
Q Consensus       189 g~~~~~~--~~~~~~-----~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~-----~~~~E~~~~~~~---  251 (340)
                      +......  ...++.     ..++.|+.++.+++++|++.+ + +||++||.++||....     .+++|+.+.+.+   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            9754322  122333     355667799999999998875 5 8999999999985321     345665433211   


Q ss_pred             -CCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCe--EEecC---CceeE
Q 019470          252 -PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL--TVYGD---GKQTR  325 (340)
Q Consensus       252 -~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---g~~~~  325 (340)
                       +..+.+.|+.||.++|.+++.+.+.++++++++||++||||+....-..++..+.. ...+...  ..++.   ....+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLS-PITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHH-HhcCCccccccccccccccCce
Confidence             22344689999999999999998888999999999999999754222233333322 2233321  11111   11246


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      +|+|++|+|++++.
T Consensus       247 dfi~v~Dva~a~~~  260 (353)
T PLN02896        247 ALVHIEDICDAHIF  260 (353)
T ss_pred             eEEeHHHHHHHHHH
Confidence            99999999999875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.1e-28  Score=228.20  Aligned_cols=220  Identities=19%  Similarity=0.256  Sum_probs=161.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc--cccc-cCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHH-FGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~-~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .+|+||||||+||||++|+++|+++|++|++++|+.......  +... ....+++++.+|+.+.     .+.++|+|||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            467999999999999999999999999999988865432211  1000 1123678888888764     3457999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccccCCC-----CCCCCCCCCCCCC-CCCCCCh
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPL-----QHPQKETYWGNVN-PIGVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~g~~~-----~~~~~E~~~~~~~-~~~~~~~  258 (340)
                      +||........+++...+++|+.++.+++++|.+. +. +||++||.++|+...     ..+++|+.+.... ...+.+.
T Consensus        84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  163 (325)
T PLN02989         84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW  163 (325)
T ss_pred             eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence            99965432233456788999999999999999885 44 899999987765432     3356777543211 1123468


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      |+.+|..+|.+++.+.++++++++++||+++|||+.... ..+...++..+++++...  +  .+.++|+|++|+|++++
T Consensus       164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~-~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~  238 (325)
T PLN02989        164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPT-LNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHV  238 (325)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCC-CCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHH
Confidence            999999999999999888899999999999999986432 234455666666665432  2  34589999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       239 ~  239 (325)
T PLN02989        239 K  239 (325)
T ss_pred             H
Confidence            5

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=1.5e-28  Score=228.71  Aligned_cols=218  Identities=19%  Similarity=0.266  Sum_probs=156.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc--ccccc-cCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHH-FGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~--~~~~~-~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      +|+|||||||||||++|+++|+++|++|++++|+......  .+... ....+++++.+|+.++     .+.++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            5689999999999999999999999999999986543211  11100 0124678888888764     35689999999


Q ss_pred             ccCCCCCCCcCCh-hhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcc--cccCC---CCCCCCCCCCCCC-CCCCCCCh
Q 019470          188 ACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSE--VYGDP---LQHPQKETYWGNV-NPIGVRSC  258 (340)
Q Consensus       188 Ag~~~~~~~~~~~-~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~--v~g~~---~~~~~~E~~~~~~-~~~~~~~~  258 (340)
                      |+....  ...++ ...+++|+.|+.+++++|++. ++ +|||+||++  +|+..   ...+++|+.+... ......+.
T Consensus        84 A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~  161 (322)
T PLN02662         84 ASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLW  161 (322)
T ss_pred             CCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccch
Confidence            986432  22234 378899999999999999987 66 899999976  46532   1234566532211 01112368


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      |+.+|..+|.+++.+.++++++++++||+++|||+.... ......++..++.+++.  .  +++.++|+|++|+|++++
T Consensus       162 Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva~a~~  236 (322)
T PLN02662        162 YVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPT-LNTSAEAILNLINGAQT--F--PNASYRWVDVRDVANAHI  236 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCC-CCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHHHHHH
Confidence            999999999999999888899999999999999975322 22334455556665432  2  246789999999999987


Q ss_pred             hC
Q 019470          339 TI  340 (340)
Q Consensus       339 ~~  340 (340)
                      ++
T Consensus       237 ~~  238 (322)
T PLN02662        237 QA  238 (322)
T ss_pred             HH
Confidence            53

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.1e-28  Score=228.01  Aligned_cols=219  Identities=21%  Similarity=0.321  Sum_probs=160.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc--cccc-ccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMH-HFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~--~~~~-~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .+++||||||+||||++++++|+++|++|+++.|+......  .+.. .....+++++.+|+.++     .+.++|+|||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            46799999999999999999999999999999886543221  1110 00124678888998764     3557999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccc--cCC---CCCCCCCCCCCCCC-CCCCCCh
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY--GDP---LQHPQKETYWGNVN-PIGVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~--g~~---~~~~~~E~~~~~~~-~~~~~~~  258 (340)
                      +|+.... ...+.....+++|+.|+.+++++|++. ++ +||++||.++|  +..   ...+.+|++|.... +..+.+.
T Consensus        84 ~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~  162 (322)
T PLN02986         84 TASPVFF-TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW  162 (322)
T ss_pred             eCCCcCC-CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccc
Confidence            9986432 112233457899999999999999986 55 89999998754  432   23456777664321 1134578


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      |+.+|..+|.+++.+.++++++++++||+++|||+.... ..+...++..++.++++  ++  .+.++|+|++|+|++++
T Consensus       163 Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~  237 (322)
T PLN02986        163 YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPT-LNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHI  237 (322)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCC-CCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHH
Confidence            999999999999999888899999999999999975432 12233455666666653  33  46789999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       238 ~  238 (322)
T PLN02986        238 K  238 (322)
T ss_pred             H
Confidence            5

>PLN02240 UDP-glucose 4-epimerase

Probab=99.96  E-value=4.6e-28  Score=228.19  Aligned_cols=222  Identities=28%  Similarity=0.421  Sum_probs=166.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc---cccccc--CCCceEEeeCcccccc-----c--CC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE---NVMHHF--GNPNFELIRHDVVEPL-----L--LE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~---~~~~~~--~~~~~~~~~~D~~~~~-----~--~~  180 (340)
                      .+++++|+|||||||||.+|+++|+++|++|++++|.......   ......  ...++.++.+|+.++.     +  .+
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            3567899999999999999999999999999999875432211   111110  1235678888887642     2  26


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      +|+|||+|+.........++...+++|+.++.+++++|++.++ +||++||+++|+.....+++|+     .+..+.+.|
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~~~~~Y  156 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPLSATNPY  156 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCCHH
Confidence            8999999986543334456788999999999999999999886 8999999999987666677787     566677899


Q ss_pred             HHHHHHHHHHHHHHHHh-hCCcEEEEEeCceeCCCCCC----CC---ccHHHHHHHHHHhCC--CeEEec------CCce
Q 019470          260 DEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPRMCI----DD---GRVVSNFVAQALRKE--PLTVYG------DGKQ  323 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~-~gi~~~ivRp~~i~G~~~~~----~~---~~~~~~~~~~~~~~~--~~~~~~------~g~~  323 (340)
                      +.+|..+|.+++.++.. .+++++++|++++||++...    ..   ...+..++..+..++  .+.+++      +|.+
T Consensus       157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  236 (352)
T PLN02240        157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG  236 (352)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCE
Confidence            99999999999988654 57899999999999975321    11   112223455555543  455555      6789


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      .++|+|++|++++++.
T Consensus       237 ~~~~i~v~D~a~a~~~  252 (352)
T PLN02240        237 VRDYIHVMDLADGHIA  252 (352)
T ss_pred             EEeeEEHHHHHHHHHH
Confidence            9999999999998654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=2.3e-28  Score=230.45  Aligned_cols=219  Identities=21%  Similarity=0.272  Sum_probs=153.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc--ccccc-CCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHF-GNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~-~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      ..++||||||+||||++|+++|+++|++|++++|........  ..... ...++.++.+|+.+.     .+.++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            456899999999999999999999999999999864332211  10000 112467788888654     4557999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCC-CCCC-CCCCCCCCC----CCCCCCCh
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP-LQHP-QKETYWGNV----NPIGVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~-~~~~-~~E~~~~~~----~~~~~~~~  258 (340)
                      +|+.... ...+.....+++|+.|+.+++++|++.+ + +|||+||.++|+.. ...+ .+|++|...    .+..+.+.
T Consensus        84 ~A~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~  162 (351)
T PLN02650         84 VATPMDF-ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM  162 (351)
T ss_pred             eCCCCCC-CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence            9986431 1122234788999999999999999977 5 89999998776543 2233 467655321    12224468


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHH--HhCCCeEEecCCceeEccccHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA--LRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      |+.+|..+|.+++.++++++++++++||+++|||+....   ....++..+  ..++... ++. .+.++|+|++|++++
T Consensus       163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~---~~~~~~~~~~~~~~~~~~-~~~-~~~r~~v~V~Dva~a  237 (351)
T PLN02650        163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS---MPPSLITALSLITGNEAH-YSI-IKQGQFVHLDDLCNA  237 (351)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC---CCccHHHHHHHhcCCccc-cCc-CCCcceeeHHHHHHH
Confidence            999999999999999988899999999999999975321   112222221  2233221 222 234799999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       238 ~~~  240 (351)
T PLN02650        238 HIF  240 (351)
T ss_pred             HHH
Confidence            875

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.96  E-value=1.1e-28  Score=227.75  Aligned_cols=205  Identities=24%  Similarity=0.328  Sum_probs=154.5

Q ss_pred             EEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCCC-C
Q 019470          120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPVH-Y  196 (340)
Q Consensus       120 lVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~~-~  196 (340)
                      ||||||||||++|++.|+++|++|+++.+..              .+|+.+.+..+..+.  ++|+|||+|+...... .
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~   66 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN   66 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence            6999999999999999999999887664321              122322222223333  5899999998754222 3


Q ss_pred             cCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHH
Q 019470          197 KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS-CYDEGKRTAETLTMDYH  274 (340)
Q Consensus       197 ~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK~~~E~~v~~~~  274 (340)
                      ..++...++.|+.++.+++++|++.++ +||++||+.||+.....+++|+++.+ .+..|.+ .|+.+|..+|++++.+.
T Consensus        67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~~e~~~~~~~  145 (306)
T PLN02725         67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLT-GPPEPTNEWYAIAKIAGIKMCQAYR  145 (306)
T ss_pred             hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhcc-CCCCCCcchHHHHHHHHHHHHHHHH
Confidence            345677899999999999999999997 89999999999977677888876432 2334433 59999999999999998


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHH----HHhCCCeEE-ecCCceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQ----ALRKEPLTV-YGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~----~~~~~~~~~-~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +..+++++++||+++||++....  ...++..++..    ...+.++.+ ++++++.++|+|++|++++++.
T Consensus       146 ~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        146 IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            88899999999999999975321  23344444433    345666655 7888999999999999999865

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.96  E-value=5.5e-29  Score=216.80  Aligned_cols=216  Identities=28%  Similarity=0.466  Sum_probs=183.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCc-ccccccccCCCceEEeeCccccccc-------CCCCEEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYH  186 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~D~Vih  186 (340)
                      ++++||||.||||++.+..+...  .++.+.++--.-.. ...+......++..+++.|+.+...       .++|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            68999999999999999999887  45677666532222 2233334456789999999977643       36999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCC-CCCCCCCCCCCCCChHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQK-ETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~-E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      .|+..+....-.++......|+.++..++++++..|.  +||++||..|||+..+.... |.     +...|.++|+.+|
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-----s~~nPtnpyAasK  161 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-----SLLNPTNPYAASK  161 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-----ccCCCCCchHHHH
Confidence            9998776666667788889999999999999999973  89999999999998876655 54     7788889999999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++|..+++|.+.++++++++|.++||||++  .....++.|+....++++.++.|+|.++++|+|++|+++++.+
T Consensus       162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q--~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~  235 (331)
T KOG0747|consen  162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQ--YPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKA  235 (331)
T ss_pred             HHHHHHHHHHhhccCCcEEEEeccCccCCCc--ChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHH
Confidence            9999999999999999999999999999987  4577888999988899999999999999999999999999864

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.96  E-value=2.8e-28  Score=223.23  Aligned_cols=193  Identities=26%  Similarity=0.343  Sum_probs=154.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCC--CCEEEEcccCCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE--VDQIYHLACPASPVH  195 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~D~Vih~Ag~~~~~~  195 (340)
                      +|||||||||||++|+++|+++|++|++++|.               ..|+.+.+.....+.+  +|+|||+||......
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   65 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG   65 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence            58999999999999999999999999999884               1233333333334444  599999999754333


Q ss_pred             CcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Q 019470          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR  275 (340)
Q Consensus       196 ~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~  275 (340)
                      ....+...+++|+.++.+++++|++.+.+||++||.++|+.....+.+|+     .+..+.+.|+.+|..+|.+++.+  
T Consensus        66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~-----~~~~~~~~Y~~~K~~~E~~~~~~--  138 (287)
T TIGR01214        66 AESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYRED-----DATNPLNVYGQSKLAGEQAIRAA--  138 (287)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCC-----CCCCCcchhhHHHHHHHHHHHHh--
Confidence            33456778899999999999999998889999999999987666677777     44456689999999999998764  


Q ss_pred             hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          276 GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       276 ~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                        +++++++||+.+||++.   ...++..++..+.+++++.+.++  +.++++|++|++++++.
T Consensus       139 --~~~~~ilR~~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~  195 (287)
T TIGR01214       139 --GPNALIVRTSWLYGGGG---GRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAA  195 (287)
T ss_pred             --CCCeEEEEeeecccCCC---CCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHH
Confidence              67999999999999973   24566677777777777777664  67899999999999875

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.96  E-value=9.7e-28  Score=223.73  Aligned_cols=199  Identities=23%  Similarity=0.306  Sum_probs=155.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      ++|+||||||+||||++|+++|+++|  ++|++++|..... ..+.......++.++.+|+.+.     .+.++|+|||+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-WEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            56799999999999999999999986  6899998864322 1111122224678888898774     34579999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      ||.........++...+++|+.|+.+++++|++.++ +||++||...+                   .|.+.|+.+|+++
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~-------------------~p~~~Y~~sK~~~  142 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA-------------------NPINLYGATKLAS  142 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC-------------------CCCCHHHHHHHHH
Confidence            997543334456778999999999999999999986 89999985321                   2336799999999


Q ss_pred             HHHHHHHHH---hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCC-CeEEecCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHR---GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~---~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |.+++.++.   +.|++++++|||+|||++.     .+++.+...+..+. ++.+ +++++.++|+|++|++++++.
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~  213 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLK  213 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHH
Confidence            999987643   4699999999999999863     46676776666665 4555 467889999999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.96  E-value=3.3e-27  Score=221.20  Aligned_cols=217  Identities=25%  Similarity=0.475  Sum_probs=159.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc--cccCCCceEEeeCcccccc-----cC--CCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--HHFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~-----~~--~~D~Vih~  187 (340)
                      |+|+|||||||||.+|++.|+++|++|++++|..........  ......++.++.+|+.+..     +.  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            589999999999999999999999999999875332221111  1112234567778876542     22  58999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC-CCCChHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI-GVRSCYDEGKRT  265 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~-~~~~~Y~~sK~~  265 (340)
                      |+.........+....+++|+.++.+++++|++.++ +||++||+++||.....+++|+.     +. .+.+.|+.+|..
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~-----~~~~p~~~Y~~sK~~  155 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLM  155 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCcccccc-----CCCCCCChhHHHHHH
Confidence            986543333345667899999999999999999986 89999999999876666677773     33 456899999999


Q ss_pred             HHHHHHHHHHhh-CCcEEEEEeCceeCCCCCC----CC----ccHHHHHHHHHHhCC--CeEEec------CCceeEccc
Q 019470          266 AETLTMDYHRGA-GVEVRIARIFNTYGPRMCI----DD----GRVVSNFVAQALRKE--PLTVYG------DGKQTRSFQ  328 (340)
Q Consensus       266 ~E~~v~~~~~~~-gi~~~ivRp~~i~G~~~~~----~~----~~~~~~~~~~~~~~~--~~~~~~------~g~~~~~~v  328 (340)
                      +|++++.++++. +++++++|++++||+....    ..    ..++ .++..+..++  .+.+++      ++.+.++|+
T Consensus       156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  234 (338)
T PRK10675        156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLM-PYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI  234 (338)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHH-HHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeE
Confidence            999999987653 7999999999999974211    11    1223 3344455432  345554      678899999


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      |++|+++++++
T Consensus       235 ~v~D~a~~~~~  245 (338)
T PRK10675        235 HVMDLADGHVA  245 (338)
T ss_pred             EHHHHHHHHHH
Confidence            99999998764

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.95  E-value=3.8e-27  Score=218.33  Aligned_cols=208  Identities=25%  Similarity=0.363  Sum_probs=155.7

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCccccc-----c----cCCCCEEEEcc
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----L----LLEVDQIYHLA  188 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~----~~~~D~Vih~A  188 (340)
                      |||||||||||+++++.|+++|+ +|++++|.....  .+.. +   ....+..|+.++     .    +.++|+|||+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~-~---~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A   74 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLN-L---ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG   74 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhh-h---hheeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence            68999999999999999999998 798888754322  1110 1   011223333322     1    24799999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      +...  ....++...+++|+.++.+++++|++.+++||++||+++|+... .+..|++    .+..|.+.|+.+|..+|.
T Consensus        75 ~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~-~~~~e~~----~~~~p~~~Y~~sK~~~e~  147 (314)
T TIGR02197        75 ACSD--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE-AGFREGR----ELERPLNVYGYSKFLFDQ  147 (314)
T ss_pred             cccC--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC-CCccccc----CcCCCCCHHHHHHHHHHH
Confidence            9643  23446778889999999999999999888999999999998754 3455553    233466889999999999


Q ss_pred             HHHHHHH--hhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEe------cCCceeEccccHHHHHHHHH
Q 019470          269 LTMDYHR--GAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVY------GDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       269 ~v~~~~~--~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~v~v~Dva~a~~  338 (340)
                      +++++..  ..+++++++||+.+||++.....  ..++..++..+.+++++.++      ++|++.++|+|++|++++++
T Consensus       148 ~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~  227 (314)
T TIGR02197       148 YVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNL  227 (314)
T ss_pred             HHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHH
Confidence            9987543  23679999999999999753221  24566778888888877664      46788899999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       228 ~  228 (314)
T TIGR02197       228 W  228 (314)
T ss_pred             H
Confidence            5

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02686 cinnamoyl-CoA reductase

Probab=99.95  E-value=2.8e-27  Score=224.16  Aligned_cols=219  Identities=18%  Similarity=0.218  Sum_probs=158.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-------CCCceEEeeCccccc-----ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-------GNPNFELIRHDVVEP-----LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~-----~~~~  180 (340)
                      ..++|+||||||+||||++|+++|+++|++|++++|+..... .+....       ....+.++.+|+.+.     .+.+
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            457889999999999999999999999999999887543211 111100       012467888888764     3567


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCc--ccccCC--CC--CCCCCCCCCCC-C
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTS--EVYGDP--LQ--HPQKETYWGNV-N  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~--~v~g~~--~~--~~~~E~~~~~~-~  251 (340)
                      +|+|||+|+...............++|+.++.+++++|++. ++ +|||+||.  .+|+..  ..  .+++|+.|.+. .
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            99999999875432221222456678999999999999986 56 89999995  478742  22  34677766432 3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      +..+.+.|+.+|..+|.+++.+++++|++++++||++||||+......    ..+..++++. ..+++++  .++|+||+
T Consensus       209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~----~~~~~~~~g~-~~~~g~g--~~~~v~V~  281 (367)
T PLN02686        209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS----TATIAYLKGA-QEMLADG--LLATADVE  281 (367)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC----hhHHHHhcCC-CccCCCC--CcCeEEHH
Confidence            445667899999999999999988889999999999999997422111    1122344453 4555655  35799999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+++++++
T Consensus       282 Dva~A~~~  289 (367)
T PLN02686        282 RLAEAHVC  289 (367)
T ss_pred             HHHHHHHH
Confidence            99999875

>PLN02996 fatty acyl-CoA reductase

Probab=99.95  E-value=6.5e-27  Score=228.76  Aligned_cols=219  Identities=16%  Similarity=0.143  Sum_probs=160.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCccc--ccc-c----------------c---cCCCceEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKE--NVM-H----------------H---FGNPNFEL  168 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~--~~~-~----------------~---~~~~~~~~  168 (340)
                      .++++|+|||||||||++|++.|++.+.   +|+++.|.......  .+. .                .   ....++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4678999999999999999999998753   78999986543211  100 0                0   01157889


Q ss_pred             eeCccccc------------ccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccc
Q 019470          169 IRHDVVEP------------LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY  234 (340)
Q Consensus       169 ~~~D~~~~------------~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~  234 (340)
                      +.+|+.++            .+.++|+|||+|+...   ...++...+++|+.|+.+++++|++. ++ +||++||+++|
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccC---CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            99998732            2357999999998654   34568889999999999999999987 45 79999999999


Q ss_pred             cCCCCCCCCCCCCCCC--------------------------------------------C---CCCCCChHHHHHHHHH
Q 019470          235 GDPLQHPQKETYWGNV--------------------------------------------N---PIGVRSCYDEGKRTAE  267 (340)
Q Consensus       235 g~~~~~~~~E~~~~~~--------------------------------------------~---~~~~~~~Y~~sK~~~E  267 (340)
                      |.... .+.|..+...                                            .   ..++.+.|+.||+.+|
T Consensus       166 G~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE  244 (491)
T PLN02996        166 GEKSG-LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE  244 (491)
T ss_pred             cCCCc-eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence            86432 1222111100                                            0   1224478999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHH------HHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVV------SNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .++..+..  +++++++||++|||++..+ ...++      ..++..+.+|....+++++++.+||+||||++++++.
T Consensus       245 ~lv~~~~~--~lpv~i~RP~~V~G~~~~p-~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~  319 (491)
T PLN02996        245 MLLGNFKE--NLPLVIIRPTMITSTYKEP-FPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIV  319 (491)
T ss_pred             HHHHHhcC--CCCEEEECCCEeccCCcCC-CCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHH
Confidence            99987743  8999999999999997533 22232      3344445566666788999999999999999999875

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.95  E-value=2.5e-26  Score=213.49  Aligned_cols=217  Identities=29%  Similarity=0.493  Sum_probs=162.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c--CCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L--LEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~--~~~D~Vih~Ag~  190 (340)
                      +||||||||+||.+++++|+++|++|+++++......+..........++++.+|+.++.     +  .++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999999887643322222111111114667788887652     2  269999999997


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ........++...++.|+.++.+++++|++.++ +||++||.++|+.....+.+|+     ++..+.+.|+.+|..+|.+
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~~~~~~~y~~sK~~~e~~  155 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SPLGPINPYGRSKLMSERI  155 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CCCCCCCchHHHHHHHHHH
Confidence            644444446667889999999999999999886 8999999999987766677777     4555678899999999999


Q ss_pred             HHHHHHh-hCCcEEEEEeCceeCCCCCC-------CCccHHHHHHHHHH-hCCCeEEec------CCceeEccccHHHHH
Q 019470          270 TMDYHRG-AGVEVRIARIFNTYGPRMCI-------DDGRVVSNFVAQAL-RKEPLTVYG------DGKQTRSFQFVSDLV  334 (340)
Q Consensus       270 v~~~~~~-~gi~~~ivRp~~i~G~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~------~g~~~~~~v~v~Dva  334 (340)
                      ++.++++ .+++++++||+.+||+....       ....++..+..... +..++..++      ++++.++|||++|++
T Consensus       156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a  235 (328)
T TIGR01179       156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA  235 (328)
T ss_pred             HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence            9998776 69999999999999985321       11234454554443 234444433      567889999999999


Q ss_pred             HHHHh
Q 019470          335 RLTET  339 (340)
Q Consensus       335 ~a~~~  339 (340)
                      ++++.
T Consensus       236 ~~~~~  240 (328)
T TIGR01179       236 DAHLA  240 (328)
T ss_pred             HHHHH
Confidence            99764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.95  E-value=1.2e-27  Score=218.94  Aligned_cols=193  Identities=27%  Similarity=0.374  Sum_probs=146.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPV  194 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~  194 (340)
                      ||||||||+|+||++|.+.|.++|++|+++.|.               .+|+.+.+.....+.  ++|+|||+||.....
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~   65 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD   65 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence            699999999999999999999999999999773               222222222222222  589999999987666


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  274 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~  274 (340)
                      .++.+++..+++|+.++.+++++|++.+.++||+||..||+.....+..|+     ++..|.+.||.+|..+|+.+++..
T Consensus        66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~-----d~~~P~~~YG~~K~~~E~~v~~~~  140 (286)
T PF04321_consen   66 ACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTED-----DPPNPLNVYGRSKLEGEQAVRAAC  140 (286)
T ss_dssp             HHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TT-----S----SSHHHHHHHHHHHHHHHH-
T ss_pred             hhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccC-----CCCCCCCHHHHHHHHHHHHHHHhc
Confidence            678889999999999999999999999999999999999988777778888     566788999999999999997643


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                          -+..|+|++.+||+.    ...++..++..+.+++.+.+..  ++.++.+|++|+|++++.
T Consensus       141 ----~~~~IlR~~~~~g~~----~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~  195 (286)
T PF04321_consen  141 ----PNALILRTSWVYGPS----GRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILE  195 (286)
T ss_dssp             ----SSEEEEEE-SEESSS----SSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHH
T ss_pred             ----CCEEEEecceecccC----CCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHH
Confidence                378999999999983    4578888999998899888765  478999999999999875

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.95  E-value=2e-27  Score=213.56  Aligned_cols=213  Identities=24%  Similarity=0.280  Sum_probs=130.2

Q ss_pred             EEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCc--cccccc---------cc---CCCceEEeeCccccccc------
Q 019470          121 VTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGR--KENVMH---------HF---GNPNFELIRHDVVEPLL------  178 (340)
Q Consensus       121 VtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~--~~~~~~---------~~---~~~~~~~~~~D~~~~~~------  178 (340)
                      |||||||||.+|+++|++++.  +|+|+.|.....  .+.+..         ..   ...++.++.+|+.++.+      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  999999975331  111111         11   15789999999988643      


Q ss_pred             -----CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCC-----CCC
Q 019470          179 -----LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKE-----TYW  247 (340)
Q Consensus       179 -----~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E-----~~~  247 (340)
                           .++|+|||||+.   +++..++....+.|+.|+.+++++|.+.+. +|+|+||+.+.+..... ..|     ...
T Consensus        81 ~~~L~~~v~~IiH~Aa~---v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~-~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAAS---VNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGT-IEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS----SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-HHH--
T ss_pred             hhccccccceeeecchh---hhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCc-ccccccccccc
Confidence                 369999999985   445667888999999999999999997664 99999996565544322 111     111


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCC--CCCccHHHHHHHHHHh-CCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC--IDDGRVVSNFVAQALR-KEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~  324 (340)
                      .........++|.+||+.+|++++++.++.|++++|+|||.|+|....  .+...+...++..... +.-....++.+..
T Consensus       157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  236 (249)
T PF07993_consen  157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDAR  236 (249)
T ss_dssp             EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT
T ss_pred             cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCce
Confidence            112333455799999999999999998888999999999999994322  1234434444444444 3333355565667


Q ss_pred             EccccHHHHHHHH
Q 019470          325 RSFQFVSDLVRLT  337 (340)
Q Consensus       325 ~~~v~v~Dva~a~  337 (340)
                      .|+++||.+|++|
T Consensus       237 ~d~vPVD~va~aI  249 (249)
T PF07993_consen  237 LDLVPVDYVARAI  249 (249)
T ss_dssp             --EEEHHHHHHHH
T ss_pred             EeEECHHHHHhhC
Confidence            9999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.95  E-value=1e-26  Score=214.27  Aligned_cols=219  Identities=25%  Similarity=0.332  Sum_probs=173.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcc-cccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      ++.+++||||+||+|+||+++|++++  .+|+++|..+.... ......+....+.+..+|+.+.     ++.++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            45689999999999999999999998  69999998654211 1111111356788888888664     56778 8888


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      +|+...+.....+.+..+++|+.||.+++++|++.++ ++||+||..|..........++++.  .|......|+.||+.
T Consensus        82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p--~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLP--YPLKHIDPYGESKAL  159 (361)
T ss_pred             eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCC--CccccccccchHHHH
Confidence            8876555555667889999999999999999999998 8999999998866555332222221  223444689999999


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      +|+++++.+...++..+++||..||||+    +...++.++..+..++-+...++++...++++++.|+.+++++
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYGpg----d~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA  230 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYGPG----DKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILA  230 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccCCC----CccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHH
Confidence            9999999876668999999999999996    4677788888888899888899998999999999999988753

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.94  E-value=3.7e-26  Score=212.71  Aligned_cols=209  Identities=23%  Similarity=0.316  Sum_probs=155.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~  191 (340)
                      |+|+||||+||||+++++.|+++|++|++++|+......     +....++++.+|+.+.     .+.++|+|||+|+..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-----LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-----cccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            479999999999999999999999999999996543211     1123567778887653     456899999999753


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCC-CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~-~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      .  .+..++...+++|+.++.+++++|++.++ +||++||..+|+.. ...+.+|+...  .+....+.|+.+|.++|++
T Consensus        76 ~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~~  151 (328)
T TIGR03466        76 R--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPS--SLDDMIGHYKRSKFLAEQA  151 (328)
T ss_pred             c--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCC--CcccccChHHHHHHHHHHH
Confidence            2  23456788899999999999999999886 89999999999853 34456666321  1222246799999999999


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.+..+++++++++||+++||++...  ......++.....++.... .+  ...+|+|++|++++++.
T Consensus       152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~-~~--~~~~~i~v~D~a~a~~~  216 (328)
T TIGR03466       152 ALEMAAEKGLPVVIVNPSTPIGPRDIK--PTPTGRIIVDFLNGKMPAY-VD--TGLNLVHVDDVAEGHLL  216 (328)
T ss_pred             HHHHHHhcCCCEEEEeCCccCCCCCCC--CCcHHHHHHHHHcCCCcee-eC--CCcceEEHHHHHHHHHH
Confidence            999988789999999999999997421  1222334444444432222 22  33689999999999765

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=5.3e-26  Score=202.81  Aligned_cols=192  Identities=24%  Similarity=0.266  Sum_probs=165.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPV  194 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~  194 (340)
                      |+|||||++|++|.+|++.|. .+++|+++++.               .+|+.+.|...+.+.  ++|+|||+|+.....
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~---------------~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD   64 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRA---------------ELDITDPDAVLEVIRETRPDVVINAAAYTAVD   64 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCc---------------cccccChHHHHHHHHhhCCCEEEECccccccc
Confidence            359999999999999999888 66899999873               256666665555444  589999999998777


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  274 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~  274 (340)
                      .++.+++..+.+|..|+.+++++|++.|.++||+||..||+.....+..|+     ++..|.+.||+||+++|..++.+ 
T Consensus        65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~-----D~~~P~nvYG~sKl~GE~~v~~~-  138 (281)
T COG1091          65 KAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKET-----DTPNPLNVYGRSKLAGEEAVRAA-  138 (281)
T ss_pred             cccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCC-----CCCCChhhhhHHHHHHHHHHHHh-
Confidence            788889999999999999999999999999999999999988887888888     67788899999999999999665 


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                         +-+..|+|.+.+||...    .+|+..+++...+++++.+..  ++..+.+++.|+|+++..
T Consensus       139 ---~~~~~I~Rtswv~g~~g----~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~  194 (281)
T COG1091         139 ---GPRHLILRTSWVYGEYG----NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILE  194 (281)
T ss_pred             ---CCCEEEEEeeeeecCCC----CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHH
Confidence               46789999999999853    667888888888888988865  489999999999999875

>PLN02583 cinnamoyl-CoA reductase

Probab=99.94  E-value=6.4e-26  Score=208.99  Aligned_cols=212  Identities=18%  Similarity=0.199  Sum_probs=149.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-ccccccc--CCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF--GNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~--~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      ++++||||||+||||++++++|+++|++|++++|+..... ......+  ...++.++.+|+.+.     .+.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4568999999999999999999999999999998532211 1111111  123577888888764     4668999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccc--cCC---CCCCCCCCCCCCCC-CCCCCCh
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVY--GDP---LQHPQKETYWGNVN-PIGVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~--g~~---~~~~~~E~~~~~~~-~~~~~~~  258 (340)
                      .++....  ....++.++++|+.|+.+++++|.+. ++ +||++||..++  +..   ...+++|+.|.+.. ...+...
T Consensus        85 ~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  162 (297)
T PLN02583         85 CFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW  162 (297)
T ss_pred             eCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccH
Confidence            8764322  12246788999999999999999886 45 89999997654  311   12356777664322 1112247


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      |+.||..+|++++.+.++.+++++++||++||||+.....         .++.+.. ..+++  ..++||||+|+|++++
T Consensus       163 Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~---------~~~~~~~-~~~~~--~~~~~v~V~Dva~a~~  230 (297)
T PLN02583        163 HALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN---------PYLKGAA-QMYEN--GVLVTVDVNFLVDAHI  230 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch---------hhhcCCc-ccCcc--cCcceEEHHHHHHHHH
Confidence            9999999999999998778999999999999999742110         1222221 22233  3467999999999987


Q ss_pred             hC
Q 019470          339 TI  340 (340)
Q Consensus       339 ~~  340 (340)
                      ++
T Consensus       231 ~a  232 (297)
T PLN02583        231 RA  232 (297)
T ss_pred             HH
Confidence            53

>PLN00016 RNA-binding protein; Provisional

Probab=99.94  E-value=1.3e-25  Score=213.83  Aligned_cols=195  Identities=19%  Similarity=0.304  Sum_probs=150.5

Q ss_pred             CCCCeEEEE----cCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc------cccCCCceEEeeCcccc--ccc--C
Q 019470          114 RKGLRIVVT----GGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM------HHFGNPNFELIRHDVVE--PLL--L  179 (340)
Q Consensus       114 ~~~~~vlVt----GatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~------~~~~~~~~~~~~~D~~~--~~~--~  179 (340)
                      ..+++||||    |||||||++|+++|+++|++|++++|..........      ..+...+++++.+|+.+  ..+  .
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~  129 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGA  129 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccC
Confidence            345789999    999999999999999999999999997643211100      01122347788888865  222  4


Q ss_pred             CCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      ++|+|||+++.                +..++.+++++|++.|+ +|||+||.++|+.....+..|+     .+..+.+ 
T Consensus       130 ~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~-----~~~~p~~-  187 (378)
T PLN00016        130 GFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG-----DAVKPKA-  187 (378)
T ss_pred             CccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC-----CcCCCcc-
Confidence            69999998752                24578899999999998 8999999999997666666666     3333322 


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                         +|..+|.+++    +.+++++++||+++||++.   ...+...++..+.+++++.+++++++.++|+|++|++++++
T Consensus       188 ---sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~---~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~  257 (378)
T PLN00016        188 ---GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGN---NKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFA  257 (378)
T ss_pred             ---hHHHHHHHHH----HcCCCeEEEeceeEECCCC---CCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHH
Confidence               7999998764    4589999999999999973   23456677888888888888888999999999999999987


Q ss_pred             hC
Q 019470          339 TI  340 (340)
Q Consensus       339 ~~  340 (340)
                      .+
T Consensus       258 ~~  259 (378)
T PLN00016        258 LV  259 (378)
T ss_pred             HH
Confidence            53

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.94  E-value=4.1e-26  Score=204.68  Aligned_cols=196  Identities=29%  Similarity=0.372  Sum_probs=146.6

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccc---cCCCceE----EeeCccccc-----ccC--CCCE
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH---FGNPNFE----LIRHDVVEP-----LLL--EVDQ  183 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~---~~~~~~~----~~~~D~~~~-----~~~--~~D~  183 (340)
                      ||||||+|.||+.|+++|++.+. +++++++++....+...+.   ....++.    .+-+|+.+.     .+.  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            79999999999999999999986 8999999755433222211   1222333    346777664     344  7999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHH
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEG  262 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (340)
                      |||.|+.-+....++++.+.+++|+.||.|++++|.++++ +||++||....                   +|.+.||.|
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv-------------------~PtnvmGat  141 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV-------------------NPTNVMGAT  141 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS-------------------S--SHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC-------------------CCCcHHHHH
Confidence            9999998766668889999999999999999999999998 99999996543                   455899999


Q ss_pred             HHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          263 KRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       263 K~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |+.+|.++..++...   +.+++++|+|||.|+     .+++++.|.+++.+|+++++ .+.+.+|-|+.+++.++.++.
T Consensus       142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS-----~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~  215 (293)
T PF02719_consen  142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGS-----RGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQ  215 (293)
T ss_dssp             HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTG-----TTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCCCCCcEEEEEEecceecC-----CCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHH
Confidence            999999999987654   679999999999996     47899999999999999997 456889999999999998875

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.94  E-value=7.5e-26  Score=206.30  Aligned_cols=214  Identities=22%  Similarity=0.229  Sum_probs=159.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc--cc---------cccccCCCceEEeeCccccccc------
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK--EN---------VMHHFGNPNFELIRHDVVEPLL------  178 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~--~~---------~~~~~~~~~~~~~~~D~~~~~~------  178 (340)
                      ++||+||||||+|.+|+.+|+.+-. +|+|++|......  +.         .+......+++++.+|+.++.+      
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            4799999999999999999999865 9999999654211  11         1122345789999999987643      


Q ss_pred             -----CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe-EEEEeCcccccCCCCCCCCC----CCCC
Q 019470          179 -----LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQHPQKE----TYWG  248 (340)
Q Consensus       179 -----~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~-~i~~SS~~v~g~~~~~~~~E----~~~~  248 (340)
                           ..+|.|||||+.   +++...+.++...|+.||..++++|...+.| ++|+||++|+........++    .+..
T Consensus        81 ~~~La~~vD~I~H~gA~---Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAAL---VNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchh---hcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence                 359999999985   5677789999999999999999999998765 99999999886543322222    1222


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCC--CCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC--IDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                      ......+.++|++|||.+|.+++.+.+. |++++|+|||+|.|+...  .+..++...|+..+++-...   ++.....+
T Consensus       158 ~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~---P~~~~~~~  233 (382)
T COG3320         158 RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIA---PDSEYSLD  233 (382)
T ss_pred             ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCC---CCcccchh
Confidence            2233445689999999999999999776 999999999999998752  24456666777766664433   34455667


Q ss_pred             cccHHHHHHHH
Q 019470          327 FQFVSDLVRLT  337 (340)
Q Consensus       327 ~v~v~Dva~a~  337 (340)
                      .+.++++++++
T Consensus       234 ~~p~~~v~~~v  244 (382)
T COG3320         234 MLPVDHVARAV  244 (382)
T ss_pred             hCccceeeEEe
Confidence            77766666554

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=9.1e-26  Score=201.11  Aligned_cols=218  Identities=29%  Similarity=0.435  Sum_probs=172.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc----ccCCCceEEeeCccccccc-------CCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH----HFGNPNFELIRHDVVEPLL-------LEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~-------~~~D~V  184 (340)
                      +++||||||+||||+|.+.+|+++|+.|+++|+......+.+..    ......+.+.++|+.+..+       .++|.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V   81 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV   81 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence            45899999999999999999999999999999875544332211    1124689999999988532       369999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC-CCChHHHH
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG-VRSCYDEG  262 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~-~~~~Y~~s  262 (340)
                      +|.|+........+++..+...|+.|+.++++.|++.++ .+||.||+.+||.+..-|++|++     +.. |.++|+.+
T Consensus        82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~-----~t~~p~~pyg~t  156 (343)
T KOG1371|consen   82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEED-----PTDQPTNPYGKT  156 (343)
T ss_pred             EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcC-----CCCCCCCcchhh
Confidence            999998887777888999999999999999999999997 89999999999999999999994     444 77899999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeC--CCCCCCC------ccHHHHHHHHHHhC--CCeEEe------cCCceeEc
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYG--PRMCIDD------GRVVSNFVAQALRK--EPLTVY------GDGKQTRS  326 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G--~~~~~~~------~~~~~~~~~~~~~~--~~~~~~------~~g~~~~~  326 (340)
                      |...|.+++.+.+..+..++.+|.++++|  |.....+      .+..+ .+.+..-+  ....+.      -||+..++
T Consensus       157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~dgt~vrd  235 (343)
T KOG1371|consen  157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTIDGTIVRD  235 (343)
T ss_pred             hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccccCCCeeec
Confidence            99999999999988889999999999999  4222111      11222 22222211  222222      25689999


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      ++|+-|+++.++.
T Consensus       236 yi~v~Dla~~h~~  248 (343)
T KOG1371|consen  236 YIHVLDLADGHVA  248 (343)
T ss_pred             ceeeEehHHHHHH
Confidence            9999999998765

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.93  E-value=5.9e-25  Score=209.05  Aligned_cols=202  Identities=29%  Similarity=0.375  Sum_probs=169.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccc---ccccCCCceEEeeCccccc-----ccCC--CC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEP-----LLLE--VD  182 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~-----~~~~--~D  182 (340)
                      ..+|+||||||+|-||+++++++++.+. +++.+++++.+.....   .......+...+-+|+.|.     ++.+  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            5789999999999999999999999986 7888888765433222   1222235667777787664     4555  99


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      +|||.|+..+..-++.++.+.+++|+.||.|++++|.++|+ +||++||...                   .+|.+.||.
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA-------------------V~PtNvmGa  388 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA-------------------VNPTNVMGA  388 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc-------------------cCCchHhhH
Confidence            99999998887779999999999999999999999999998 8999998643                   255589999


Q ss_pred             HHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          262 GKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      ||+.+|.++..++++.   +-+++++|.|||.|++     +++++-|.+++.+|+++++ .+.+.+|-|+.+.|.++.++
T Consensus       389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVl  462 (588)
T COG1086         389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVL  462 (588)
T ss_pred             HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHH
Confidence            9999999999987643   3789999999999975     6899999999999999986 67899999999999999887


Q ss_pred             hC
Q 019470          339 TI  340 (340)
Q Consensus       339 ~~  340 (340)
                      ++
T Consensus       463 qA  464 (588)
T COG1086         463 QA  464 (588)
T ss_pred             HH
Confidence            53

>PLN02778 3,5-epimerase/4-reductase

Probab=99.93  E-value=1.7e-24  Score=199.44  Aligned_cols=190  Identities=19%  Similarity=0.249  Sum_probs=137.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~  194 (340)
                      ..|+||||||+||||++|++.|+++|++|+.......             ..+.+..|+.+   .++|+|||+||..+..
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~-------------~~~~v~~~l~~---~~~D~ViH~Aa~~~~~   71 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLE-------------NRASLEADIDA---VKPTHVFNAAGVTGRP   71 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccC-------------CHHHHHHHHHh---cCCCEEEECCcccCCC
Confidence            3468999999999999999999999999975432110             00111112211   2689999999986532


Q ss_pred             C---CcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCC------CCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          195 H---YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ------HPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       195 ~---~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~------~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      .   +..++...+++|+.++.+++++|++.+++++++||.++|+....      .+.+|++    .+..+.+.|+.+|++
T Consensus        72 ~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Yg~sK~~  147 (298)
T PLN02778         72 NVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFYSKTKAM  147 (298)
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCchHHHHHH
Confidence            2   44678889999999999999999999988888898888865322      2355553    333445889999999


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|.++..+.+     ..++|++.++|++.     .....|+..+++++++...+     .+|+|++|++++++.
T Consensus       148 ~E~~~~~y~~-----~~~lr~~~~~~~~~-----~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~  206 (298)
T PLN02778        148 VEELLKNYEN-----VCTLRVRMPISSDL-----SNPRNFITKITRYEKVVNIP-----NSMTILDELLPISIE  206 (298)
T ss_pred             HHHHHHHhhc-----cEEeeecccCCccc-----ccHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHH
Confidence            9999987753     46788877777642     12245778888887665443     279999999998875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.93  E-value=3e-24  Score=202.49  Aligned_cols=215  Identities=23%  Similarity=0.283  Sum_probs=152.4

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcc--ccccc-----cc-----CCCceEEeeCcccccc------
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRK--ENVMH-----HF-----GNPNFELIRHDVVEPL------  177 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~--~~~~~-----~~-----~~~~~~~~~~D~~~~~------  177 (340)
                      +|+|||||||||++|+++|+++|  ++|++++|......  +.+..     .+     ...+++++.+|+.++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  67999999754211  01100     00     0146888899976542      


Q ss_pred             -----cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          178 -----LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       178 -----~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                           ..++|+|||+|+...   ....+....+.|+.++.+++++|.+.++ +|+++||.++|+.....+..|++.....
T Consensus        81 ~~~~~~~~~d~vih~a~~~~---~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~  157 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVN---WVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTP  157 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEec---cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccc
Confidence                 346999999998643   3345677888999999999999999887 6999999999976443333343322212


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCC--CCccHHHHHHHHHHhCCCeEEecCCce-eEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI--DDGRVVSNFVAQALRKEPLTVYGDGKQ-TRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v  328 (340)
                      ...+.+.|+.+|+.+|.+++.+.+. |++++++|||.+||+....  +...++..++........   +++... ..+|+
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~  233 (367)
T TIGR01746       158 PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA---YPDSPELTEDLT  233 (367)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC---CCCCCccccCcc
Confidence            2234578999999999999887654 9999999999999973211  122344445544444332   233333 57899


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      |++|++++++.
T Consensus       234 ~vddva~ai~~  244 (367)
T TIGR01746       234 PVDYVARAIVA  244 (367)
T ss_pred             cHHHHHHHHHH
Confidence            99999999865

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.93  E-value=2.8e-24  Score=196.89  Aligned_cols=204  Identities=19%  Similarity=0.192  Sum_probs=142.5

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC-C-
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH-Y-  196 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~-~-  196 (340)
                      ||||||+||||+++++.|+++|++|++++|+.........     ..+.....+...+.+.++|+|||+||...... + 
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~   75 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EGYKPWAPLAESEALEGADAVINLAGEPIADKRWT   75 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----eeeecccccchhhhcCCCCEEEECCCCCcccccCC
Confidence            6899999999999999999999999999997654322111     11111122333456678999999998643211 1 


Q ss_pred             cCChhhHHHHHHHHHHHHHHHHHHcCC---eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019470          197 KFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY  273 (340)
Q Consensus       197 ~~~~~~~~~~Nv~g~~~ll~~a~~~~~---~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~  273 (340)
                      ......+++.|+.++.+++++|++.++   +||+.||.++||.....+++|+.     +..+.+.|+..+...|..+..+
T Consensus        76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~-----~~~~~~~~~~~~~~~e~~~~~~  150 (292)
T TIGR01777        76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEED-----SPAGDDFLAELCRDWEEAAQAA  150 (292)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCccc-----CCCCCChHHHHHHHHHHHhhhc
Confidence            124567888999999999999999985   46666667789876666677763     2333355677777777766544


Q ss_pred             HHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          274 HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       274 ~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                       ++.+++++++||+++||+..     .+...+......... ..++++++.++|+|++|+++++..
T Consensus       151 -~~~~~~~~ilR~~~v~G~~~-----~~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~  209 (292)
T TIGR01777       151 -EDLGTRVVLLRTGIVLGPKG-----GALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILF  209 (292)
T ss_pred             -hhcCCceEEEeeeeEECCCc-----chhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHH
Confidence             34589999999999999852     123333322222111 125788899999999999999875

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.92  E-value=9.8e-24  Score=214.62  Aligned_cols=214  Identities=25%  Similarity=0.285  Sum_probs=150.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHH--hCCCeEEEEeCCCCCcc-cccccccCCCceEEeeCcccccc----------cCCCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLI--ARGDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEPL----------LLEVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll--~~G~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~----------~~~~D~  183 (340)
                      |+|||||||||||++|+++|+  ++|++|++++|...... ..+.......+++++.+|+.++.          +.++|+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~D~   80 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDIDH   80 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCCCE
Confidence            489999999999999999999  57999999999542211 11111112246788888887632          267999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHH
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEG  262 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (340)
                      |||+||....   ........++|+.++.+++++|++.++ +|||+||..+||.... +.+|+++..  +..+.+.|+.+
T Consensus        81 Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~-~~~e~~~~~--~~~~~~~Y~~s  154 (657)
T PRK07201         81 VVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEG-VFREDDFDE--GQGLPTPYHRT  154 (657)
T ss_pred             EEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccC-ccccccchh--hcCCCCchHHH
Confidence            9999986432   334667889999999999999999986 8999999999986432 345543321  22334689999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCc-----cHHHHHHHHHHhC-CCeEEecCCceeEccccHHHHHHH
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      |+.+|.++++   ..+++++++||++|||+.......     .++..++..+... ..+..++++...++++|++|++++
T Consensus       155 K~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~a  231 (657)
T PRK07201        155 KFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADA  231 (657)
T ss_pred             HHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHH
Confidence            9999999864   348999999999999986421111     1122233332111 223344556677899999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      +..
T Consensus       232 i~~  234 (657)
T PRK07201        232 LDH  234 (657)
T ss_pred             HHH
Confidence            864

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.91  E-value=2.5e-23  Score=198.48  Aligned_cols=192  Identities=22%  Similarity=0.275  Sum_probs=146.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc--ccc-ccCCCceEEeeCccccc-----ccC----C
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMH-HFGNPNFELIRHDVVEP-----LLL----E  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~-~~~~~~~~~~~~D~~~~-----~~~----~  180 (340)
                      ..++++|+|||||||||++++++|+++|++|++++|+.......  ... .....+++++.+|+.++     .+.    +
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            45778999999999999999999999999999999975432110  000 01124678888888764     233    5


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      +|+||||++....     .....+++|+.++.+++++|++.++ +||++||.++++                   +...|
T Consensus       137 ~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~-------------------p~~~~  192 (390)
T PLN02657        137 VDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK-------------------PLLEF  192 (390)
T ss_pred             CcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC-------------------cchHH
Confidence            9999999874221     1223467899999999999999997 899999987652                   12468


Q ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE-ccccHHHHHHHHH
Q 019470          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR-SFQFVSDLVRLTE  338 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~v~v~Dva~a~~  338 (340)
                      ..+|...|..++.  ...+++++++||+.+||+.         ..++..+.+++++.++|+++..+ ++||++|+|++++
T Consensus       193 ~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~---------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~  261 (390)
T PLN02657        193 QRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL---------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIA  261 (390)
T ss_pred             HHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc---------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHH
Confidence            8999999998765  3468999999999999853         33556667788888889988765 6899999999876


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       262 ~  262 (390)
T PLN02657        262 D  262 (390)
T ss_pred             H
Confidence            4

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.90  E-value=1.4e-23  Score=195.20  Aligned_cols=182  Identities=17%  Similarity=0.200  Sum_probs=136.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~  191 (340)
                      |+|+|||||||||++++++|+++|++|++++|+.....     .+...+++++.+|+.++     .+.++|+|||+++..
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-----~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-----FLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSR   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-----hHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence            58999999999999999999999999999999643221     11123678888888764     467899999987532


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                           ..++....++|+.++.+++++|+++|+ +||++||.+....                  +...|..+|..+|..+
T Consensus        76 -----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~------------------~~~~~~~~K~~~e~~l  132 (317)
T CHL00194         76 -----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQY------------------PYIPLMKLKSDIEQKL  132 (317)
T ss_pred             -----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccccc------------------CCChHHHHHHHHHHHH
Confidence                 223455778999999999999999997 8999998543210                  1146899999999887


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +    +.+++++++||+.+|+..        +..+...++.+++..+ .++++.++|+|++|+|++++.
T Consensus       133 ~----~~~l~~tilRp~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~  188 (317)
T CHL00194        133 K----KSGIPYTIFRLAGFFQGL--------ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLK  188 (317)
T ss_pred             H----HcCCCeEEEeecHHhhhh--------hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHH
Confidence            4    458999999999888642        1222233344455444 445677899999999999864

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=7e-23  Score=178.84  Aligned_cols=219  Identities=26%  Similarity=0.299  Sum_probs=182.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---c--ccccCCCceEEeeCcccccc-------cCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---V--MHHFGNPNFELIRHDVVEPL-------LLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~--~~~~~~~~~~~~~~D~~~~~-------~~~~D~  183 (340)
                      +|+.||||-||+-|.+|++.|+++||+|+++.|........   +  .......++.++.+|++|..       ..++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            57899999999999999999999999999999874433332   1  12234456889999998852       246899


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHH
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |+|+|+..+.....+.|....+++..|+.+++++.+..+   .||...||+..||...+.|++|.     +|+.|.++|+
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~-----TPFyPrSPYA  156 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYA  156 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC-----CCCCCCCHHH
Confidence            999999988777888899999999999999999999875   38999999999999999999999     9999999999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHHHHHH
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      .+|.-+..+...|.+.+|+-.|.-+.++--+|..... -.+-+..-+.++..|.. -..+|+-+..+||-|+.|.+++++
T Consensus       157 vAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mw  236 (345)
T COG1089         157 VAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMW  236 (345)
T ss_pred             HHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHH
Confidence            9999999999999999999999988888877763221 13344555666666643 445799999999999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       237 l  237 (345)
T COG1089         237 L  237 (345)
T ss_pred             H
Confidence            5

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.89  E-value=4.5e-22  Score=196.69  Aligned_cols=221  Identities=18%  Similarity=0.174  Sum_probs=154.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcc--cccc-c-------------------ccCCCceEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRK--ENVM-H-------------------HFGNPNFEL  168 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~--~~~~-~-------------------~~~~~~~~~  168 (340)
                      .++++|+|||||||||.+|+++|++.+.   +|+++.|......  +.+. +                   .....++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4789999999999999999999998764   7899998643221  1110 0                   001346888


Q ss_pred             eeCcccccc-----------cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCccccc
Q 019470          169 IRHDVVEPL-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYG  235 (340)
Q Consensus       169 ~~~D~~~~~-----------~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g  235 (340)
                      +.+|+.++.           ..++|+|||+|+...   ...+++..+++|+.|+.+++++|++.+ . +||++||+.|||
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG  273 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT---FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG  273 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc---cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence            999998763           246999999998643   345788899999999999999999875 3 799999999998


Q ss_pred             CCCCCCCCCCCCCC----------------------------------C--------------------CCCCCCChHHH
Q 019470          236 DPLQHPQKETYWGN----------------------------------V--------------------NPIGVRSCYDE  261 (340)
Q Consensus       236 ~~~~~~~~E~~~~~----------------------------------~--------------------~~~~~~~~Y~~  261 (340)
                      .... .+.|.....                                  .                    ...+..+.|..
T Consensus       274 ~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~  352 (605)
T PLN02503        274 QRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF  352 (605)
T ss_pred             CCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence            7532 233332210                                  0                    00223488999


Q ss_pred             HHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC----CCCCc-cHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHH
Q 019470          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM----CIDDG-RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      ||+.+|.+++++.  .+++++|+||+.|.+...    .+.++ ......+..+.+|.--.++++++...|+|+||.|+++
T Consensus       353 TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna  430 (605)
T PLN02503        353 TKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNA  430 (605)
T ss_pred             HHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHH
Confidence            9999999998654  389999999999943211    00000 1111122222244333467899999999999999999


Q ss_pred             HHhC
Q 019470          337 TETI  340 (340)
Q Consensus       337 ~~~~  340 (340)
                      ++.+
T Consensus       431 ~i~a  434 (605)
T PLN02503        431 TLAA  434 (605)
T ss_pred             HHHH
Confidence            8753

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.88  E-value=9.7e-22  Score=215.16  Aligned_cols=218  Identities=19%  Similarity=0.209  Sum_probs=155.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC----CeEEEEeCCCCCccc--cccc---------ccCCCceEEeeCcccccc--
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG----DSVIVVDNFFTGRKE--NVMH---------HFGNPNFELIRHDVVEPL--  177 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G----~~V~~l~r~~~~~~~--~~~~---------~~~~~~~~~~~~D~~~~~--  177 (340)
                      ..++|+|||||||||.+|+++|+++|    ++|+++.|.......  .+..         .....++.++.+|+.++.  
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    799999996432211  1100         001236888889986542  


Q ss_pred             ---------cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCC---------
Q 019470          178 ---------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL---------  238 (340)
Q Consensus       178 ---------~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~---------  238 (340)
                               ..++|+|||+|+...   +...+......|+.|+.+++++|++.++ +|+|+||.++|+...         
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~---~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVH---WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEec---CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence                     246999999998643   3445666667899999999999998886 899999999986421         


Q ss_pred             ---CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCC--CCccHHHHHHHHHHhCC
Q 019470          239 ---QHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI--DDGRVVSNFVAQALRKE  313 (340)
Q Consensus       239 ---~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~--~~~~~~~~~~~~~~~~~  313 (340)
                         ...+.|+++....+..+.+.|+.+|+.+|.++..+.+ .|++++++|||+|||++...  +...++..++.....  
T Consensus      1127 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~-- 1203 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ-- 1203 (1389)
T ss_pred             hccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH--
Confidence               1224444433333344557899999999999988765 49999999999999986432  122333334433332  


Q ss_pred             CeEEecCCceeEccccHHHHHHHHHh
Q 019470          314 PLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       314 ~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                       ...++++...++|++|+|++++++.
T Consensus      1204 -~~~~p~~~~~~~~~~Vddva~ai~~ 1228 (1389)
T TIGR03443      1204 -LGLIPNINNTVNMVPVDHVARVVVA 1228 (1389)
T ss_pred             -hCCcCCCCCccccccHHHHHHHHHH
Confidence             2334455667999999999999865

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.86  E-value=7.6e-21  Score=171.47  Aligned_cols=202  Identities=16%  Similarity=0.027  Sum_probs=138.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++|||||+|+||.++++.|+++|++|++++|+++...+...... ....+.++.+|+.+..            ..+
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999997643322211110 1234677888887642            135


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHH----HHHHHHHH-HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVG----TLNMLGLA-KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g----~~~ll~~a-~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..+.++..+++|+.+    +..+++++ ++.+. +||++||...+..              
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~--------------  150 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA--------------  150 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC--------------
Confidence            899999999754322    123466788899999    55566666 55554 8999999653311              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccH-------HHHHHHHHHhCCCeEEecC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRV-------VSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~  320 (340)
                        ....+.|+.+|...+.+++.++++   .+++++++|||.++++.........       .......+        ++.
T Consensus       151 --~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  220 (262)
T PRK13394        151 --SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKV--------MLG  220 (262)
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHH--------Hhc
Confidence              122367999999999999988765   4899999999999998531100000       00111111        223


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                      +...++|++++|++++++.
T Consensus       221 ~~~~~~~~~~~dva~a~~~  239 (262)
T PRK13394        221 KTVDGVFTTVEDVAQTVLF  239 (262)
T ss_pred             CCCCCCCCCHHHHHHHHHH
Confidence            3456789999999999875

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.86  E-value=1.4e-20  Score=164.59  Aligned_cols=201  Identities=19%  Similarity=0.216  Sum_probs=138.5

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC-CCCEEEEcccCCCCCC-C
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHLACPASPVH-Y  196 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vih~Ag~~~~~~-~  196 (340)
                      |+|||||||||++|+.+|.+.||+|++++|+++.....+..     .+.  ..+..+.... ++|+|||+||..-... |
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----~v~--~~~~~~~~~~~~~DavINLAG~~I~~rrW   73 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----NVT--LWEGLADALTLGIDAVINLAGEPIAERRW   73 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----ccc--ccchhhhcccCCCCEEEECCCCccccccC
Confidence            68999999999999999999999999999987665443321     111  2233333333 7999999999643322 3


Q ss_pred             c-CChhhHHHHHHHHHHHHHHHHHHcC--C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019470          197 K-FNPVKTIKTNVVGTLNMLGLAKRVG--A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD  272 (340)
Q Consensus       197 ~-~~~~~~~~~Nv~g~~~ll~~a~~~~--~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~  272 (340)
                      . +..+..++.-+..|..+.++..+..  . .+|.-|.++.||+..+..++|++     +..- .+-++.=..=|+....
T Consensus        74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-----~~g~-~Fla~lc~~WE~~a~~  147 (297)
T COG1090          74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-----PPGD-DFLAQLCQDWEEEALQ  147 (297)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-----CCCC-ChHHHHHHHHHHHHhh
Confidence            3 3456788888999999999988654  3 46666768899999999999983     2211 2222222222333322


Q ss_pred             HHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          273 YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       273 ~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      . +..|.+++.+|.|.|.++.     +.....+..-..-+--- .+|+|.|+++|||++|++++++.
T Consensus       148 a-~~~gtRvvllRtGvVLs~~-----GGaL~~m~~~fk~glGG-~~GsGrQ~~SWIhieD~v~~I~f  207 (297)
T COG1090         148 A-QQLGTRVVLLRTGVVLSPD-----GGALGKMLPLFKLGLGG-KLGSGRQWFSWIHIEDLVNAILF  207 (297)
T ss_pred             h-hhcCceEEEEEEEEEecCC-----CcchhhhcchhhhccCC-ccCCCCceeeeeeHHHHHHHHHH
Confidence            2 3459999999999999975     33444444333333222 25899999999999999999875

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=3.2e-21  Score=163.10  Aligned_cols=210  Identities=23%  Similarity=0.312  Sum_probs=165.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCccccccc--CCCCEEEEcccCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHLACPA  191 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~D~Vih~Ag~~  191 (340)
                      +++|||||++|.+|++|.+.+.+.|.  +-.++.              ....+|+.+...++..+  ++...|||+|+..
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~--------------~skd~DLt~~a~t~~lF~~ekPthVIhlAAmV   66 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI--------------GSKDADLTNLADTRALFESEKPTHVIHLAAMV   66 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEe--------------ccccccccchHHHHHHHhccCCceeeehHhhh
Confidence            46899999999999999999999875  211111              11233443333333333  4689999999866


Q ss_pred             CCCC-CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          192 SPVH-YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       192 ~~~~-~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      +.-+ ......++++.|+.-.-|++..|-+.|+ ++++..|+++|.+....|++|.......|.....+|...|+.+.-.
T Consensus        67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~  146 (315)
T KOG1431|consen   67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQ  146 (315)
T ss_pred             cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHH
Confidence            5443 3334678999999999999999999997 8999999999999899999999776656655557899999999888


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHh----CC-CeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALR----KE-PLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~----~~-~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+.|..++|-.++.+-|.++|||..+.+  ++.+++.++.++-.    +. ++.+||.|...|.|+|++|+|++++.
T Consensus       147 n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~  223 (315)
T KOG1431|consen  147 NQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIW  223 (315)
T ss_pred             HHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHH
Confidence            8999999999999999999999987654  45567777665543    43 78999999999999999999999864

>PRK09135 pteridine reductase; Provisional

Probab=99.86  E-value=2.8e-20  Score=166.28  Aligned_cols=196  Identities=15%  Similarity=0.133  Sum_probs=135.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEeeCcccccc------------cC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++|||||+|+||++++++|+++|++|++++|+.....+.....+   ....+.++.+|+.+..            +.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999986433222221111   1235678888887642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+|||+||......    ..++++..+++|+.++.++++++...    +..++++++..  +.              .
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--~~--------------~  148 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--AE--------------R  148 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--hc--------------C
Confidence            5899999999654322    12346778999999999999998642    23566666532  11              3


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF  329 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  329 (340)
                      +..+.+.|+.+|..+|.+++.++++.  +++++++|||.++|+...   ..+...+......+.++.         .+.+
T Consensus       149 ~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~---~~~~~~~~~~~~~~~~~~---------~~~~  216 (249)
T PRK09135        149 PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG---NSFDEEARQAILARTPLK---------RIGT  216 (249)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc---ccCCHHHHHHHHhcCCcC---------CCcC
Confidence            34455789999999999999998775  699999999999999742   122222223333333221         1235


Q ss_pred             HHHHHHHHH
Q 019470          330 VSDLVRLTE  338 (340)
Q Consensus       330 v~Dva~a~~  338 (340)
                      ++|+++++.
T Consensus       217 ~~d~a~~~~  225 (249)
T PRK09135        217 PEDIAEAVR  225 (249)
T ss_pred             HHHHHHHHH
Confidence            899999984

>PRK05865 hypothetical protein; Provisional

Probab=99.85  E-value=9.3e-21  Score=193.06  Aligned_cols=163  Identities=23%  Similarity=0.350  Sum_probs=125.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~  191 (340)
                      |+|+||||+||||++++++|+++|++|++++|.....   .     ...+.++.+|+.+.     .+.++|+|||+|+..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---W-----PSSADFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---c-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            4899999999999999999999999999999864221   1     12456777777653     456899999999753


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                      ..         .+++|+.++.+++++|++.++ +||++||..                              |..+|+++
T Consensus        73 ~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------------K~aaE~ll  113 (854)
T PRK05865         73 GR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------------QPRVEQML  113 (854)
T ss_pred             cc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------------HHHHHHHH
Confidence            21         457999999999999999987 899999842                              78888876


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .    +++++++++||+++||++.        ..++..++. .++...++++..++|+|++|++++++.
T Consensus       114 ~----~~gl~~vILRp~~VYGP~~--------~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~  169 (854)
T PRK05865        114 A----DCGLEWVAVRCALIFGRNV--------DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVR  169 (854)
T ss_pred             H----HcCCCEEEEEeceEeCCCh--------HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHH
Confidence            4    4589999999999999962        234444332 233333555667899999999999864

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.85  E-value=1.8e-20  Score=168.61  Aligned_cols=195  Identities=18%  Similarity=0.235  Sum_probs=131.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------cc-CCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LL-LEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~-~~~D~Vi  185 (340)
                      +..+|+|+||||+|+||+.++++|+++|++|+++.|+.........   ...+++++.+|+.+.      .+ .++|+||
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHhhcCCCEEE
Confidence            4567899999999999999999999999999999986543221111   123577788887652      23 4799999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      |++|.....    +....+++|..++.++++++++.++ +||++||.++||.....+..+.+    ...++...|...|.
T Consensus        91 ~~~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~----~~~~~~~~~~~~k~  162 (251)
T PLN00141         91 CATGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAY----IFLNLFGLTLVAKL  162 (251)
T ss_pred             ECCCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcch----hHHHHHHHHHHHHH
Confidence            998853211    1223346889999999999999886 89999999999754332222211    01111233455677


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++    +.+++++++||+.+++....                + .+...........+++.+|+|++++.
T Consensus       163 ~~e~~l~----~~gi~~~iirpg~~~~~~~~----------------~-~~~~~~~~~~~~~~i~~~dvA~~~~~  216 (251)
T PLN00141        163 QAEKYIR----KSGINYTIVRPGGLTNDPPT----------------G-NIVMEPEDTLYEGSISRDQVAEVAVE  216 (251)
T ss_pred             HHHHHHH----hcCCcEEEEECCCccCCCCC----------------c-eEEECCCCccccCcccHHHHHHHHHH
Confidence            7777664    45899999999999986421                1 11111111122357999999998865

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.85  E-value=1.2e-20  Score=161.31  Aligned_cols=173  Identities=28%  Similarity=0.404  Sum_probs=131.2

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCCCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPASP  193 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~~~  193 (340)
                      |+|+||||++|+.++++|+++|++|+++.|++....+       ..+++++.+|+.++     .+.++|+||++++....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence            7999999999999999999999999999997553332       46889999998765     46799999999975321


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD  272 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~  272 (340)
                                   +...+.+++++|++.++ ++|++|+.++|+........+.      . .....|...|..+|+.++ 
T Consensus        74 -------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~e~~~~-  132 (183)
T PF13460_consen   74 -------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED------K-PIFPEYARDKREAEEALR-  132 (183)
T ss_dssp             -------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT------C-GGGHHHHHHHHHHHHHHH-
T ss_pred             -------------cccccccccccccccccccceeeeccccCCCCCccccccc------c-cchhhhHHHHHHHHHHHH-
Confidence                         27888999999999997 9999999999875433211111      0 111568899998888773 


Q ss_pred             HHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          273 YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       273 ~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                         +.+++|+++||+.+||+...  ...++               ...+....++|+.+|+|++++.
T Consensus       133 ---~~~~~~~ivrp~~~~~~~~~--~~~~~---------------~~~~~~~~~~i~~~DvA~~~~~  179 (183)
T PF13460_consen  133 ---ESGLNWTIVRPGWIYGNPSR--SYRLI---------------KEGGPQGVNFISREDVAKAIVE  179 (183)
T ss_dssp             ---HSTSEEEEEEESEEEBTTSS--SEEEE---------------SSTSTTSHCEEEHHHHHHHHHH
T ss_pred             ---hcCCCEEEEECcEeEeCCCc--ceeEE---------------eccCCCCcCcCCHHHHHHHHHH
Confidence               45999999999999998631  11111               1133445689999999999875

...

>PRK12320 hypothetical protein; Provisional

Probab=99.85  E-value=3.4e-20  Score=185.42  Aligned_cols=168  Identities=26%  Similarity=0.361  Sum_probs=124.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc----cCCCCEEEEcccCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----LLEVDQIYHLACPAS  192 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~D~Vih~Ag~~~  192 (340)
                      |+||||||+||||++|+++|+++|++|++++|.....        ....++++.+|+.++.    +.++|+|||+|+...
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDT   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence            4899999999999999999999999999999853221        1235788888887753    357999999998531


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD  272 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~  272 (340)
                      .        ....+|+.|+.|++++|++.|+++||+||.  +|.+                   ..|.    .+|.++. 
T Consensus        73 ~--------~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~~-------------------~~~~----~aE~ll~-  118 (699)
T PRK12320         73 S--------APGGVGITGLAHVANAAARAGARLLFVSQA--AGRP-------------------ELYR----QAETLVS-  118 (699)
T ss_pred             c--------chhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCCC-------------------cccc----HHHHHHH-
Confidence            1        112589999999999999999999999985  3321                   0122    3566553 


Q ss_pred             HHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          273 YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       273 ~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                         .++++++++|++++||++......+++..++....+++++.          ++|++|++++++.
T Consensus       119 ---~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~----------vIyVdDvv~alv~  172 (699)
T PRK12320        119 ---TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR----------VLHLDDLVRFLVL  172 (699)
T ss_pred             ---hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE----------EEEHHHHHHHHHH
Confidence               34689999999999999764333456666666555544443          4899999999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.85  E-value=7.4e-20  Score=166.65  Aligned_cols=159  Identities=20%  Similarity=0.207  Sum_probs=119.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      |++|||||+|+||++++++|+++|++|++++|+.+.... +... ...++.++.+|+.+..            ..++|+|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~-~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD-LKAR-YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh-ccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999986432221 1111 1235778888887642            2358999


Q ss_pred             EEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       185 ih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      |||||.......    .+++++.+++|+.++.++++++    ++.+. +||++||......                ...
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~  144 (276)
T PRK06482         81 VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA----------------YPG  144 (276)
T ss_pred             EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC----------------CCC
Confidence            999997643322    2346678899999999999997    44454 8999999653211                112


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCce---eCCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNT---YGPR  293 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i---~G~~  293 (340)
                      .+.|+.+|+..|.+++.++++   +|++++++|||.+   ||++
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        145 FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence            368999999999999998765   5999999999988   6654

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.85  E-value=8.8e-20  Score=164.57  Aligned_cols=198  Identities=18%  Similarity=0.110  Sum_probs=135.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+..  .......+  ....+..+.+|+.+..            +
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL--VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH--HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999999998632  11111111  1234566777876631            2


Q ss_pred             CCCCEEEEcccCCCC-C----CCcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASP-V----HYKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++|||||.... .    ...+++...+++|+.++..+++.+    ++.+. +||++||...++.            
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  150 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------  150 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC------------
Confidence            368999999985321 1    122346778899999887665554    44554 8999999876531            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCC---------CCCccHHHHHHHHHHhCCCeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMC---------IDDGRVVSNFVAQALRKEPLT  316 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~---------~~~~~~~~~~~~~~~~~~~~~  316 (340)
                            ....|+.+|++.+.+++.++.+.   |+++++++||+|+++...         .....++..+.....++.++.
T Consensus       151 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T PRK12823        151 ------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK  224 (260)
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence                  01469999999999999998765   899999999999997310         011223344444444443332


Q ss_pred             EecCCceeEccccHHHHHHHHHh
Q 019470          317 VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       317 ~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                               -+.+++|++++++.
T Consensus       225 ---------~~~~~~dva~~~~~  238 (260)
T PRK12823        225 ---------RYGTIDEQVAAILF  238 (260)
T ss_pred             ---------cCCCHHHHHHHHHH
Confidence                     24578999998764

>PRK06194 hypothetical protein; Provisional

Probab=99.84  E-value=3.1e-20  Score=170.00  Aligned_cols=195  Identities=15%  Similarity=0.074  Sum_probs=134.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++|||||+|+||++++++|+++|++|++++|+.....+...... ...++.++.+|+.+..            ..+
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            456799999999999999999999999999999986443222211111 1235777889987641            125


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-------CeEEEEeCcccccCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-------ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-------~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      +|+||||||......    ..++++..+++|+.|+.++++++    .+.+       .++|++||...+...        
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------  155 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP--------  155 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            899999999865432    22346678999999999977774    3332       379999997655321        


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh-----CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~-----gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                              .....|+.+|++.|.+++.+..+.     +++++.+.||.|..+-             ....++++..++++
T Consensus       156 --------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~-------------~~~~~~~~~~~~~~  214 (287)
T PRK06194        156 --------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI-------------WQSERNRPADLANT  214 (287)
T ss_pred             --------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc-------------ccccccCchhcccC
Confidence                    122579999999999999987764     4777788887764432             11223344555566


Q ss_pred             CceeEccccHHHHHHHH
Q 019470          321 GKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~  337 (340)
                      +.+.++|++++|++..+
T Consensus       215 ~~~~~~~~~~~~~~~~~  231 (287)
T PRK06194        215 APPTRSQLIAQAMSQKA  231 (287)
T ss_pred             ccccchhhHHHHHHHhh
Confidence            66777777776666553

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.84  E-value=4.5e-20  Score=165.65  Aligned_cols=199  Identities=18%  Similarity=0.132  Sum_probs=137.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      ++++|||||+|+||+++++.|+++|++|++++|+...... +...+  ...++.++.+|+.+..            +.++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEA-AAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3589999999999999999999999999999997433221 11111  1235778888887642            3468


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |+|||+||......    ..++++..+..|+.++..+++++    ++.+. +||++||...+...               
T Consensus        80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---------------  144 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---------------  144 (255)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC---------------
Confidence            99999998754322    12235667889999988888877    44554 89999997544221               


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeE-------EecCCc
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT-------VYGDGK  322 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~  322 (340)
                       .....|+.+|...+.+++.++.+   .+++++++||+.++++..        ...+..........       ....+.
T Consensus       145 -~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (255)
T TIGR01963       145 -PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV--------EKQIADQAKTRGIPEEQVIREVMLPGQ  215 (255)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH--------HHHHHhhhcccCCCchHHHHHHHHccC
Confidence             11257999999999999888764   389999999999998742        11111111111110       011234


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ..+++++++|++++++.
T Consensus       216 ~~~~~~~~~d~a~~~~~  232 (255)
T TIGR01963       216 PTKRFVTVDEVAETALF  232 (255)
T ss_pred             ccccCcCHHHHHHHHHH
Confidence            56789999999999875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8e-20  Score=166.59  Aligned_cols=205  Identities=18%  Similarity=0.101  Sum_probs=139.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC--CCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+. ...+.  ..++.++.+|+.+..            +.
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQA-VNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5678999999999999999999999999999999875433221 11111  235677888887642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++.    +.+  .++|++||...+.              
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~--------------  148 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV--------------  148 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc--------------
Confidence            5899999999754322    123466788999999999998874    343  4899999976552              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                        +..+...|+.+|.+.+.+.+.++.+   .|+++++++||.+.++....    .................+++....++
T Consensus       149 --~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (275)
T PRK05876        149 --PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN----SERIRGAACAQSSTTGSPGPLPLQDD  222 (275)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc----hhhhcCcccccccccccccccccccc
Confidence              1123367999999987777777654   48999999999998764210    00000000001111222344445567


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|+|++++.
T Consensus       223 ~~~~~dva~~~~~  235 (275)
T PRK05876        223 NLGVDDIAQLTAD  235 (275)
T ss_pred             CCCHHHHHHHHHH
Confidence            9999999998874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.84  E-value=7.4e-20  Score=164.53  Aligned_cols=202  Identities=17%  Similarity=0.051  Sum_probs=136.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.........+.. ...++.++.+|+.++.            ..+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            356799999999999999999999999999999997543322111110 1346778889987642            236


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+|||+||.......    .+.++..+++|+.++.++++.+    ++.+. +||++||...+..               
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---------------  146 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG---------------  146 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC---------------
Confidence            8999999996543321    2235567889999966665554    44554 8999999654321               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhC--CCe-----EEecCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK--EPL-----TVYGDG  321 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g  321 (340)
                       ....+.|+.+|++.+.+.+.++.+   .++++++++||.++++....        .+......  .+.     ..+...
T Consensus       147 -~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  217 (258)
T PRK12429        147 -SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--------QIPDLAKERGISEEEVLEDVLLPL  217 (258)
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--------hhhhhccccCCChHHHHHHHHhcc
Confidence             122367999999999999888765   48999999999999875311        11111100  000     011122


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                      ...+.|++++|++++++.
T Consensus       218 ~~~~~~~~~~d~a~~~~~  235 (258)
T PRK12429        218 VPQKRFTTVEEIADYALF  235 (258)
T ss_pred             CCccccCCHHHHHHHHHH
Confidence            334679999999998764

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.1e-19  Score=162.06  Aligned_cols=197  Identities=17%  Similarity=0.098  Sum_probs=138.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++|+||||||+|+||.+|+++|+++|++|+++.|......+......  ...++.++.+|+.+..            +.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999887776543322221111  1245778888886542            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+|||+||......    ..+.+...+++|+.++.++++.+    ++.+. +||++||...+...             
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~-------------  150 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW-------------  150 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-------------
Confidence            6899999999654322    22346778999999999999887    44554 89999997755221             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .....|+.+|...+.+++.++++   .+++++++|||.++|+....   .+.......    .+      ......+
T Consensus       151 ---~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~---~~~~~~~~~----~~------~~~~~~~  214 (249)
T PRK12825        151 ---PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA---TIEEAREAK----DA------ETPLGRS  214 (249)
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc---ccchhHHhh----hc------cCCCCCC
Confidence               12367999999999999888765   58999999999999986321   111111111    00      0112338


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ++++|+++++..
T Consensus       215 ~~~~dva~~~~~  226 (249)
T PRK12825        215 GTPEDIARAVAF  226 (249)
T ss_pred             cCHHHHHHHHHH
Confidence            999999998764

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.2e-20  Score=164.79  Aligned_cols=163  Identities=17%  Similarity=0.156  Sum_probs=123.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC--CCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.+...+ ....+.  ..++..+.+|+.++.            +.
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDE-VAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999999997543221 211111  235678888887642            24


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+|||+||......     ..+++...+++|+.++..+++++.+.    +.+||++||...+.               
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~---------------  146 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH---------------  146 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc---------------
Confidence            6899999998643311     22456788999999999999998653    23899999976432               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       +......|+.+|...+.+++.++.+   .++++++++||+++++.
T Consensus       147 -~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~  191 (258)
T PRK07890        147 -SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP  191 (258)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence             1122367999999999999998865   48999999999999985

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.8e-20  Score=164.73  Aligned_cols=164  Identities=18%  Similarity=0.110  Sum_probs=122.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++++||||+|+||.+|+++|+++|++|++++|+.+...+.........++.++.+|+.++.            +.+
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999875433222211112345788889987642            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCccc-ccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v-~g~~~~~~~~E~~~~~~  250 (340)
                      +|+|||++|......    ..+++...+.+|+.++.++.+.+    ++.+. +||++||... ++..             
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------------  148 (252)
T PRK06138         82 LDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR-------------  148 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC-------------
Confidence            899999999754322    12235667899999998777665    44454 8999999653 3321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          ....|+.+|.+.+.+++.++.+.   |+++++++||.++++.
T Consensus       149 ----~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (252)
T PRK06138        149 ----GRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY  190 (252)
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence                12679999999999999998765   8999999999998875

>PRK05717 oxidoreductase; Validated

Probab=99.83  E-value=2.5e-19  Score=161.29  Aligned_cols=163  Identities=17%  Similarity=0.104  Sum_probs=122.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.....+.. ... ...+.++.+|+.+..            ..+
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~-~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-KAL-GENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HHc-CCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            567889999999999999999999999999999988643322211 111 235678888887642            135


Q ss_pred             CCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......      ..++++..+++|+.++.++++++..    .+.++|++||...+...             
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-------------  151 (255)
T PRK05717         85 LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-------------  151 (255)
T ss_pred             CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-------------
Confidence            899999999754321      2234678999999999999999863    23489999996543211             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~  293 (340)
                         ...+.|+.+|++.+.+++.++.++  ++++++++||.+.++.
T Consensus       152 ---~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~  193 (255)
T PRK05717        152 ---PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD  193 (255)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence               112579999999999999998875  5899999999998864

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.4e-19  Score=162.32  Aligned_cols=203  Identities=15%  Similarity=0.092  Sum_probs=137.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.+..            +.+
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            45679999999999999999999999999999988643222111100 01235677788887642            236


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||.......    .+++.+.+++|+.++.++++++..    .+ .+||++||...+...              
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~--------------  153 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR--------------  153 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC--------------
Confidence            8999999997543221    234567789999999999888753    23 379999997765321              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                        .....|+.+|++.|.+++.++++.   |++++++|||.+.++.........+..++.....      ++ +.....++
T Consensus       154 --~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~  224 (274)
T PRK07775        154 --PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFL  224 (274)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-cccccccc
Confidence              122579999999999999988664   8999999999876542110011111122222111      11 12235699


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|++++++.
T Consensus       225 ~~~dva~a~~~  235 (274)
T PRK07775        225 RASDLARAITF  235 (274)
T ss_pred             CHHHHHHHHHH
Confidence            99999999875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.83  E-value=4.2e-20  Score=166.44  Aligned_cols=202  Identities=17%  Similarity=0.166  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++++||||+|+||.++++.|+++|++|++++|+.....+. ...+ ...+.++.+|+.++.            +.++
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLA-ALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4567999999999999999999999999999999875432221 1111 235777888886641            2368


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc------CCeEEEEeCcc-cccCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV------GARFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~------~~~~i~~SS~~-v~g~~~~~~~~E~~~~~~  250 (340)
                      |++|||||......    ..++++..+++|+.++.++++++...      +.+||++||.. .++.              
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  147 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--------------  147 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC--------------
Confidence            99999999653222    12357778999999999999988542      24799999954 3321              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHh---CCCeEEecCCcee
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALR---KEPLTVYGDGKQT  324 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~  324 (340)
                         .+...|+.+|.+.+.+++.++.+   +|+++++++||.++++....    . ..++.....   +.....+++..+.
T Consensus       148 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~  219 (257)
T PRK07067        148 ---ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ----V-DALFARYENRPPGEKKRLVGEAVPL  219 (257)
T ss_pred             ---CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh----h-hhhhhhccCCCHHHHHHHHhhcCCC
Confidence               12367999999999999988774   58999999999999974211    0 011110000   0001112334456


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+.+++|++++++.
T Consensus       220 ~~~~~~~dva~~~~~  234 (257)
T PRK07067        220 GRMGVPDDLTGMALF  234 (257)
T ss_pred             CCccCHHHHHHHHHH
Confidence            679999999999764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.83  E-value=1.1e-19  Score=185.13  Aligned_cols=188  Identities=19%  Similarity=0.252  Sum_probs=130.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEE-EEeCCCCCcccccccccCCCceEEeeCccccccc--CCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVI-VVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~-~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~D~Vih~Ag  189 (340)
                      ..+.|+||||||+||||++|++.|.++|++|. ...+                   +.+.+.....+  .++|+|||+|+
T Consensus       377 ~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~-------------------l~d~~~v~~~i~~~~pd~Vih~Aa  437 (668)
T PLN02260        377 GKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGR-------------------LEDRSSLLADIRNVKPTHVFNAAG  437 (668)
T ss_pred             CCCCceEEEECCCchHHHHHHHHHHhCCCeEEeeccc-------------------cccHHHHHHHHHhhCCCEEEECCc
Confidence            34557999999999999999999999999883 2211                   11111111222  26899999999


Q ss_pred             CCCCC---CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCC------CCCCCCCCCCCCCCCCCCChHH
Q 019470          190 PASPV---HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPL------QHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       190 ~~~~~---~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~------~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      ..+..   .++.++...+++|+.++.+++++|++.++++|++||.+||+...      ..++.|++    .+..+.+.|+
T Consensus       438 ~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Yg  513 (668)
T PLN02260        438 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFYS  513 (668)
T ss_pred             ccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC----CCCCCCChhh
Confidence            76432   24567889999999999999999999999889999988986421      23566664    2333448899


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      .+|.++|.+++.+.     ++.++|+..+||.+.. ..    .+|+..+++.......+     .+..+++|++.+++
T Consensus       514 ~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~-~~----~nfv~~~~~~~~~~~vp-----~~~~~~~~~~~~~~  576 (668)
T PLN02260        514 KTKAMVEELLREYD-----NVCTLRVRMPISSDLS-NP----RNFITKISRYNKVVNIP-----NSMTVLDELLPISI  576 (668)
T ss_pred             HHHHHHHHHHHhhh-----hheEEEEEEecccCCC-Cc----cHHHHHHhccceeeccC-----CCceehhhHHHHHH
Confidence            99999999998763     3567777778864311 11    35666666654422122     24677788886654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.83  E-value=2.7e-19  Score=160.13  Aligned_cols=199  Identities=19%  Similarity=0.080  Sum_probs=138.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++|+|+||||+|+||.++++.|+++|++|++++|+............ ....+.++.+|+.++.            +.+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            456799999999999999999999999999999997432221111111 1234788888887642            136


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+|||++|......    ..+++...++.|+.++.++++++.    +.+ .+||++||...++.               
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~---------------  148 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV---------------  148 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc---------------
Confidence            899999998755422    223567789999999999998874    333 38999999765411               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                      +......|+.+|...+.+++.+..+   .+++++++|||.++|+........   .+...+.+..++         ..++
T Consensus       149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~---~~~~~~~~~~~~---------~~~~  216 (251)
T PRK12826        149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA---QWAEAIAAAIPL---------GRLG  216 (251)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch---HHHHHHHhcCCC---------CCCc
Confidence            1122357999999999999988765   489999999999999863211111   111222222221         2488


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+++++..
T Consensus       217 ~~~dva~~~~~  227 (251)
T PRK12826        217 EPEDIAAAVLF  227 (251)
T ss_pred             CHHHHHHHHHH
Confidence            99999998764

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.8e-19  Score=160.18  Aligned_cols=194  Identities=20%  Similarity=0.169  Sum_probs=138.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .++++++||||+|+||.+++++|+++|++|++++|....... ....+  ....+..+.+|+.+..            +.
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAER-VAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999997533211 11111  1224667788887652            23


Q ss_pred             CCCEEEEcccCCCCCC-------CcCChhhHHHHHHHHHHHHHHHHHHc-----CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAKRV-----GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-------~~~~~~~~~~~Nv~g~~~ll~~a~~~-----~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      ++|+||||||......       ..+.+.+.+.+|+.++.++++++...     +.+||++||...|.            
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------  150 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------  150 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence            6899999999753211       12346678899999999999988753     23899999987652            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                             +.+.|+.+|++.|.+++.+++++   ++++++++||.+..+....   .....+...+.++.+..        
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~---~~~~~~~~~~~~~~~~~--------  212 (250)
T PRK07774        151 -------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT---VTPKEFVADMVKGIPLS--------  212 (250)
T ss_pred             -------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc---cCCHHHHHHHHhcCCCC--------
Confidence                   12579999999999999998764   7999999999988775321   11123344444443322        


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                       -+..++|++++++.
T Consensus       213 -~~~~~~d~a~~~~~  226 (250)
T PRK07774        213 -RMGTPEDLVGMCLF  226 (250)
T ss_pred             -CCcCHHHHHHHHHH
Confidence             14568899988764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=5.5e-19  Score=158.23  Aligned_cols=202  Identities=15%  Similarity=0.064  Sum_probs=137.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++++++||||+|+||.++++.|+++|++|++++|+.....+..........+.++.+|+.++.            ..+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            35677999999999999999999999999999999975433221111111235778888887642            235


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+|||++|......     ..+.+.+.+++|+.++.++++.+..    .+ .+||++||...+..              
T Consensus        82 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  147 (251)
T PRK07231         82 VDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP--------------  147 (251)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC--------------
Confidence            899999999643222     2234677899999998888877754    34 38999999776532              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|...+.+++.++.+   .++++++++||.+.++............+.....+.         .....+
T Consensus       148 --~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  216 (251)
T PRK07231        148 --RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRL  216 (251)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCC
Confidence              122367999999999999988765   389999999999976542110000001121122221         122357


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ++++|++++++.
T Consensus       217 ~~~~dva~~~~~  228 (251)
T PRK07231        217 GTPEDIANAALF  228 (251)
T ss_pred             cCHHHHHHHHHH
Confidence            899999998764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.4e-19  Score=158.71  Aligned_cols=198  Identities=17%  Similarity=0.152  Sum_probs=136.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~~  181 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.+...+.. ... ..++.++.+|+.+.            ...++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAAR-AEL-GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHH-HHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            45679999999999999999999999999999998643222111 111 23466777777553            12468


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH---cCCeEEEEeC-cccccCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR---VGARFLLTST-SEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~---~~~~~i~~SS-~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |+||||||......    ..++++..+++|+.++.++++++..   .+.++|++|| .+.++.+                
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~----------------  145 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP----------------  145 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC----------------
Confidence            99999999754322    2235678999999999999999974   2347777777 4444421                


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCC--CCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCI--DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ....|+.+|++.|.+++.++.+.   |+++++++||.++++....  ........+...+.+..++.         -+.
T Consensus       146 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  215 (249)
T PRK06500        146 -NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFG  215 (249)
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCc
Confidence             12679999999999998887654   8999999999999874210  01112223333333332221         245


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      .++|++++++.
T Consensus       216 ~~~~va~~~~~  226 (249)
T PRK06500        216 TPEEIAKAVLY  226 (249)
T ss_pred             CHHHHHHHHHH
Confidence            78999988764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.7e-19  Score=164.49  Aligned_cols=161  Identities=13%  Similarity=0.023  Sum_probs=119.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      .+++++||||+|+||++++++|+++|++|++++|+.+... .+.. ....++..+.+|+.++.            +.++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~l~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-DFEA-LHPDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-HHHh-hcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            3568999999999999999999999999999999653321 1111 11235677788886642            13589


Q ss_pred             EEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||||........    +++...+++|+.|+.++++++.    +.+ .+||++||...+..                .
T Consensus        81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~----------------~  144 (277)
T PRK06180         81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT----------------M  144 (277)
T ss_pred             EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC----------------C
Confidence            999999975432222    2356779999999999999853    334 38999999664421                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .+...|+.+|+..|.+++.++.+   .|+++++++||.+.++.
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  187 (277)
T PRK06180        145 PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW  187 (277)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence            12367999999999999988765   48999999999997753

>PRK06128 oxidoreductase; Provisional

Probab=99.82  E-value=7.4e-19  Score=162.17  Aligned_cols=200  Identities=15%  Similarity=0.100  Sum_probs=139.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-ccccccc--CCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      .+++|++|||||+|+||.++++.|+++|++|++..+...... +.....+  ...++.++.+|+.+..            
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999988876533211 1111111  1235677888887641            


Q ss_pred             cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +.++|+||||||......     ..++++..+++|+.++.++++++...   +.+||++||...|...            
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~------------  199 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS------------  199 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC------------
Confidence            236899999999643221     23457889999999999999999753   3489999998776321            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                          .....|+.+|.+.+.+++.++.+   .|+++++++||.|.++....  .......+..+....         ....
T Consensus       200 ----~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~--~~~~~~~~~~~~~~~---------p~~r  264 (300)
T PRK06128        200 ----PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPS--GGQPPEKIPDFGSET---------PMKR  264 (300)
T ss_pred             ----CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCccc--CCCCHHHHHHHhcCC---------CCCC
Confidence                11256999999999999999876   48999999999999985321  111122222222221         1234


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +...+|++.+++.
T Consensus       265 ~~~p~dva~~~~~  277 (300)
T PRK06128        265 PGQPVEMAPLYVL  277 (300)
T ss_pred             CcCHHHHHHHHHH
Confidence            6788999988754

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.82  E-value=3.5e-19  Score=173.43  Aligned_cols=164  Identities=18%  Similarity=0.139  Sum_probs=120.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc----cc------CCCceEEeeCccccc-----cc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH----HF------GNPNFELIRHDVVEP-----LL  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~----~~------~~~~~~~~~~D~~~~-----~~  178 (340)
                      .++++||||||+|+||++++++|+++|++|++++|+..........    .+      ...+++++.+|+.+.     .+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            4677999999999999999999999999999999975443211110    00      113577888888764     46


Q ss_pred             CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS  257 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~  257 (340)
                      .++|+|||++|....  ...++...+++|+.|+.+++++|++.++ +||++||.+++...    ..+.      ......
T Consensus       158 ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~------~~~sk~  225 (576)
T PLN03209        158 GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA------ILNLFW  225 (576)
T ss_pred             cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc------chhhHH
Confidence            789999999986421  1124567788999999999999999986 99999998753111    0010      112335


Q ss_pred             hHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCC
Q 019470          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       258 ~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                      .|...|..+|..+.    +.|++|++||||.++++.
T Consensus       226 ~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~  257 (576)
T PLN03209        226 GVLCWKRKAEEALI----ASGLPYTIVRPGGMERPT  257 (576)
T ss_pred             HHHHHHHHHHHHHH----HcCCCEEEEECCeecCCc
Confidence            67788888888764    469999999999998874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=9.3e-19  Score=157.48  Aligned_cols=199  Identities=16%  Similarity=0.094  Sum_probs=137.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC--CCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.....+ ....+.  ..++.++.+|+.++.            +
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAA-AAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999987543222 111111  234777888887642            2


Q ss_pred             CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+|||+||.......    .+.+++.+.+|+.++.++++++.+.    +. +||++||.....              
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------------  151 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL--------------  151 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc--------------
Confidence            358999999997543222    2245778889999999999988643    33 899999965331              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                        +......|+.+|.+.+.+++.++.+   +|+++++++||.+.++.......  ...+...+.+..+         ...
T Consensus       152 --~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~---------~~~  218 (255)
T PRK07523        152 --ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA--DPEFSAWLEKRTP---------AGR  218 (255)
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc--CHHHHHHHHhcCC---------CCC
Confidence              1122367999999999999998764   58999999999999875211000  0112122222221         234


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +..++|++++++.
T Consensus       219 ~~~~~dva~~~~~  231 (255)
T PRK07523        219 WGKVEELVGACVF  231 (255)
T ss_pred             CcCHHHHHHHHHH
Confidence            7789999998764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=3.4e-19  Score=159.77  Aligned_cols=201  Identities=13%  Similarity=-0.036  Sum_probs=134.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++++|||||+|+||++++++|+++|++|+++.+.............  ...++.++.+|+.++.            +.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999887764322211111111  1124567777776542            24


Q ss_pred             CCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      ++|+|||+||........    ..++..+++|+.+..++++++.+.   +.+||++||...+.                +
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~  147 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR----------------P  147 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC----------------C
Confidence            689999999964332211    124578899999999999988754   23899999977652                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      ..+.+.|+.+|...|.+++.++++.  ++++++++||.+.++.... ...+.........+        +......++++
T Consensus       148 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~~~  218 (252)
T PRK06077        148 AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGES-LFKVLGMSEKEFAE--------KFTLMGKILDP  218 (252)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHh-hhhcccccHHHHHH--------hcCcCCCCCCH
Confidence            2334789999999999999998765  7899999999998763100 00000000011111        11122368999


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|++++++.
T Consensus       219 ~dva~~~~~  227 (252)
T PRK06077        219 EEVAEFVAA  227 (252)
T ss_pred             HHHHHHHHH
Confidence            999999875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=8.3e-19  Score=157.68  Aligned_cols=195  Identities=14%  Similarity=0.054  Sum_probs=135.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      |+++||||+|+||.++++.|+++|++|++++|......+.....+  ...++.++.+|+.++.            ..++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999999999999986433221111111  1246788889987742            23689


Q ss_pred             EEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHHc-----C-----C-eEEEEeCcccccCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV-----G-----A-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       183 ~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~-----~-----~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      +||||||......      ..+.++..+++|+.++.++++++...     +     . +||++||...+..         
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------  153 (256)
T PRK12745         83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV---------  153 (256)
T ss_pred             EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC---------
Confidence            9999999753221      22356778999999999998887542     1     2 6999999664321         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                             ....+.|+.+|++.|.+++.++.+   +|+++++++||.+.++...    .+...+.....++ ..       
T Consensus       154 -------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~----~~~~~~~~~~~~~-~~-------  214 (256)
T PRK12745        154 -------SPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA----PVTAKYDALIAKG-LV-------  214 (256)
T ss_pred             -------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc----ccchhHHhhhhhc-CC-------
Confidence                   112267999999999999998865   5899999999999887531    1112221111111 11       


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ....+.+++|+++++..
T Consensus       215 ~~~~~~~~~d~a~~i~~  231 (256)
T PRK12745        215 PMPRWGEPEDVARAVAA  231 (256)
T ss_pred             CcCCCcCHHHHHHHHHH
Confidence            12347789999988754

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.2e-19  Score=160.02  Aligned_cols=162  Identities=17%  Similarity=0.084  Sum_probs=120.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc-----------cCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL-----------LLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~-----------~~~  180 (340)
                      +++++|||||+|+||.++++.|+++|++|++++|+.....+...   ......++.++.+|+.++.           +.+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            45689999999999999999999999999999987543222111   1111246788888887642           235


Q ss_pred             CCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||........    +++++.+++|+.++.++++.+    ++.+. +||++||.. .++.              
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------  147 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF--------------  147 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC--------------
Confidence            89999999975433221    345677889999999988885    44554 899999954 3332              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH---hhCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHR---GAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~---~~gi~~~ivRp~~i~G~~  293 (340)
                         .+...|+.+|...+.+++.++.   .+|++++++|||.+.++.
T Consensus       148 ---~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  190 (280)
T PRK06914        148 ---PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI  190 (280)
T ss_pred             ---CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence               1236799999999999998873   359999999999998873

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.81  E-value=9.1e-19  Score=157.05  Aligned_cols=157  Identities=17%  Similarity=0.106  Sum_probs=121.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.      .  ......+..+.+|+.++.            +.+
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------L--TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------h--hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46678999999999999999999999999999999864      1  011235677788876531            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||+|......    ..+++...+++|+.++.++++++..    .+ .+||++||.....                
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~----------------  140 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV----------------  140 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc----------------
Confidence            899999999754322    2235778899999999999988753    33 3899999965321                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|+..+.+++.++.+   +|+++++++||.++++.
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~  185 (252)
T PRK08220        141 PRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM  185 (252)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence            1122367999999999999998876   69999999999999985

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.81  E-value=1.9e-18  Score=153.92  Aligned_cols=197  Identities=15%  Similarity=0.104  Sum_probs=136.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++++|+||||+|+||.+|++.|+++|++|++++|+........ ..+  ...++.++.+|+.++.            +
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALA-AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            345679999999999999999999999999999999754322111 111  1245777888886642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+|||++|......    ..+.+.+.++.|+.++.++++++.    +.+. +||++||.....              
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~--------------  146 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT--------------  146 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc--------------
Confidence            35799999998654322    122356788999999999998884    4454 899999964321              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                        +..+...|+.+|...+.+++.++++   .+++++++|||.++++...    .+............         ....
T Consensus       147 --~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~----~~~~~~~~~~~~~~---------~~~~  211 (246)
T PRK05653        147 --GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE----GLPEEVKAEILKEI---------PLGR  211 (246)
T ss_pred             --CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh----hhhHHHHHHHHhcC---------CCCC
Confidence              1122367999999999999888764   4899999999999998531    11111111221111         1245


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|+++++..
T Consensus       212 ~~~~~dva~~~~~  224 (246)
T PRK05653        212 LGQPEEVANAVAF  224 (246)
T ss_pred             CcCHHHHHHHHHH
Confidence            8889999998764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.81  E-value=3.6e-19  Score=160.47  Aligned_cols=204  Identities=18%  Similarity=0.118  Sum_probs=137.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------cCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++||||+|+||.+++++|+++|++|++++|+.........   .......+.++.+|+.+..            +.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999987543222111   1111235788888887641            246


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcc-cccCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSE-VYGDPLQHPQKETYWGN  249 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~-v~g~~~~~~~~E~~~~~  249 (340)
                      +|+|||+||.......    .++++..+++|+.++.++++++.+    .+  .++|++||.. .++..            
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------------  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK------------  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC------------
Confidence            8999999997543322    224677889999998888777643    34  3899999854 33211            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHH--hCCCeEEecCCcee
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL--RKEPLTVYGDGKQT  324 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~  324 (340)
                           ....|+.+|++.+.+++.++.+   +|+++++++||.++++...   ...+..+.....  .++....+.++...
T Consensus       150 -----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (259)
T PRK12384        150 -----HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF---QSLLPQYAKKLGIKPDEVEQYYIDKVPL  221 (259)
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh---hhhhHHHHHhcCCChHHHHHHHHHhCcc
Confidence                 1257999999999999888754   6999999999998876431   122222221110  00001112233455


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+++++|++++++.
T Consensus       222 ~~~~~~~dv~~~~~~  236 (259)
T PRK12384        222 KRGCDYQDVLNMLLF  236 (259)
T ss_pred             cCCCCHHHHHHHHHH
Confidence            678999999999864

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7e-19  Score=158.80  Aligned_cols=162  Identities=22%  Similarity=0.221  Sum_probs=119.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      ++++++|||||+|+||+++++.|+++|++|++++|+.+...+ +.......++.++.+|+.++.            +.++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAA-TAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            466899999999999999999999999999999996543222 111112225677888887642            2479


Q ss_pred             CEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcCC--eEEEEeCccc-ccCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA--RFLLTSTSEV-YGDPLQHPQKETYWGN  249 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~--~~i~~SS~~v-~g~~~~~~~~E~~~~~  249 (340)
                      |+|||+||......     ..+++.+.++.|+.++.++++++.    ..+.  +|+++||... ++.             
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-------------  154 (264)
T PRK12829         88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-------------  154 (264)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-------------
Confidence            99999999752211     223467889999999999988873    3333  5777777442 221             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          .....|+.+|...|.+++.++.+.   +++++++|||+++|+.
T Consensus       155 ----~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~  197 (264)
T PRK12829        155 ----PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPR  197 (264)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChH
Confidence                122569999999999999887653   8999999999999985

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.6e-18  Score=156.62  Aligned_cols=196  Identities=14%  Similarity=0.072  Sum_probs=134.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      +++||||||+|+||.++++.|+++|++|++++|+.....+..... ....++.++.+|+.+..            +.++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            358999999999999999999999999999998743322111110 01235778888887642            23689


Q ss_pred             EEEEcccCCCCCCCc-----CChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYK-----FNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~-----~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||||........     +.+.+.+++|+.++.++++.+..    .+.++|++||...+..                .
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~  144 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG----------------V  144 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC----------------C
Confidence            999999975433222     22567799999999999998853    3348999999765532                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      .....|+.+|+..|.+++.++.+   .++++++++||.+..+...        ....  ..+.+..  ..+.+..+++++
T Consensus       145 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~--------~~~~--~~~~~~~--~~~~~~~~~~~~  212 (263)
T PRK06181        145 PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRK--------RALD--GDGKPLG--KSPMQESKIMSA  212 (263)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcch--------hhcc--ccccccc--cccccccCCCCH
Confidence            22367999999999999887654   4899999999999776321        0000  0011111  111223478999


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|++++++.
T Consensus       213 ~dva~~i~~  221 (263)
T PRK06181        213 EECAEAILP  221 (263)
T ss_pred             HHHHHHHHH
Confidence            999998764

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.2e-18  Score=153.99  Aligned_cols=164  Identities=20%  Similarity=0.134  Sum_probs=122.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---ccc--CCCceEEeeCcccccc-----------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHF--GNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~--~~~~~~~~~~D~~~~~-----------  177 (340)
                      +++|+++||||+|+||.++++.|+++|++|++++|......+...   ...  ....+.++.+|+.+..           
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            456799999999999999999999999999998875332222111   111  1235778888886642           


Q ss_pred             -cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH-----HcCC-eEEEEeCcccccCCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK-----RVGA-RFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~-----~~~~-~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                       ..++|+|||+||......    ..+++...+++|+.++.++++++.     +.+. +||++||...+...         
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  154 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN---------  154 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------
Confidence             136899999999765322    223467788999999999999987     3443 89999996654211         


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                             .....|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       155 -------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~  197 (249)
T PRK12827        155 -------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM  197 (249)
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCc
Confidence                   12257999999999999888765   38999999999999975

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.81  E-value=1.3e-18  Score=155.56  Aligned_cols=197  Identities=16%  Similarity=0.103  Sum_probs=136.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++++||||+|+||.+++++|+++|++|+++.+..+...+.....+  ...++.++.+|+.++.            +.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999999877654322222221111  1235778889987642            23


Q ss_pred             CCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .+|+||||||.......    .+.+++.+++|+.++.++++++..    .+ .+||++||...+..              
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  149 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG--------------  149 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC--------------
Confidence            58999999997543322    135677899999999999998864    22 38999999543311              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ..+...|+.+|.+.+.+++.+..+.   ++++++++||.+.++...    ............+         ...+.+
T Consensus       150 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~----~~~~~~~~~~~~~---------~~~~~~  214 (247)
T PRK12935        150 --GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA----EVPEEVRQKIVAK---------IPKKRF  214 (247)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh----hccHHHHHHHHHh---------CCCCCC
Confidence              0122679999999999998887654   999999999999775321    1111112222221         123568


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|++++++.
T Consensus       215 ~~~edva~~~~~  226 (247)
T PRK12935        215 GQADEIAKGVVY  226 (247)
T ss_pred             cCHHHHHHHHHH
Confidence            999999999865

>PLN02253 xanthoxin dehydrogenase

Probab=99.81  E-value=2.2e-18  Score=157.32  Aligned_cols=164  Identities=20%  Similarity=0.157  Sum_probs=121.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++|+++||||+|+||.+++++|+++|++|++++|......+.........++.++.+|+.+..            +.+
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            45678999999999999999999999999999999864332211111111235778888887642            236


Q ss_pred             CCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcc-cccCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSE-VYGDPLQHPQKETYWG  248 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~-v~g~~~~~~~~E~~~~  248 (340)
                      +|+||||||......      ..++++..+++|+.++.++++++...    + .++|++||.. .++..           
T Consensus        95 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------  163 (280)
T PLN02253         95 LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-----------  163 (280)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC-----------
Confidence            999999999753211      12356789999999999998877542    2 3789998854 33321           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                            ....|+.+|++.|.+++.++.+.   ++++++++||.+.++.
T Consensus       164 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~  205 (280)
T PLN02253        164 ------GPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL  205 (280)
T ss_pred             ------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence                  11469999999999999988764   8999999999998763

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4e-19  Score=159.06  Aligned_cols=202  Identities=14%  Similarity=0.118  Sum_probs=134.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+.....+  ...++..+.+|+.++.            +.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            456799999999999999999999999999999886432222111111  1235677888887642            13


Q ss_pred             CCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      ++|+||||||...  ....++...+++|+.++.++++++.+.   +.++|++||........    .+.     .  ...
T Consensus        84 ~~d~vi~~ag~~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~-----~--~~~  150 (248)
T PRK07806         84 GLDALVLNASGGM--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT-----M--PEY  150 (248)
T ss_pred             CCcEEEECCCCCC--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC-----C--ccc
Confidence            6899999998532  223346677889999999999999864   23899999954321110    011     1  113


Q ss_pred             ChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      ..|+.+|+++|.+++.++.+   .++++++++|+.+-++..        ..+...   ..+-...........+++++|+
T Consensus       151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~dv  219 (248)
T PRK07806        151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT--------ATLLNR---LNPGAIEARREAAGKLYTVSEF  219 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh--------hhhhcc---CCHHHHHHHHhhhcccCCHHHH
Confidence            68999999999999998765   489999999988766521        111100   0000000000112369999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      +++++.
T Consensus       220 a~~~~~  225 (248)
T PRK07806        220 AAEVAR  225 (248)
T ss_pred             HHHHHH
Confidence            999875

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-18  Score=155.23  Aligned_cols=197  Identities=17%  Similarity=0.095  Sum_probs=136.4

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQ  183 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~  183 (340)
                      +++++++++||||+|+||.++++.|+++|++|++++|+.+...+ +...   ..+.++.+|+.+..        ..++|+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~d~   80 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR-LAGE---TGCEPLRLDVGDDAAIRAALAAAGAFDG   80 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHH---hCCeEEEecCCCHHHHHHHHHHhCCCCE
Confidence            35677899999999999999999999999999999986432211 1111   13456677776532        235899


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |||+||......    ..+++++.+.+|+.++.++++++.+.    +  .+||++||...+...                
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------  144 (245)
T PRK07060         81 LVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL----------------  144 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----------------
Confidence            999999753222    22346678889999999999888653    2  389999997654221                


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      .....|+.+|.+.|.+++.++.+   .+++++.++||.++++........  ......+....         ....++++
T Consensus       145 ~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~  213 (245)
T PRK07060        145 PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD--PQKSGPMLAAI---------PLGRFAEV  213 (245)
T ss_pred             CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC--HHHHHHHHhcC---------CCCCCCCH
Confidence            12267999999999999998865   489999999999998753110000  01111122211         12348999


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|++++++.
T Consensus       214 ~d~a~~~~~  222 (245)
T PRK07060        214 DDVAAPILF  222 (245)
T ss_pred             HHHHHHHHH
Confidence            999999865

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.7e-18  Score=157.54  Aligned_cols=165  Identities=19%  Similarity=0.111  Sum_probs=121.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc---cCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++++++||||+|+||.++++.|+++|++|++++|+.+.........   ....++.++.+|+.++.            
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356789999999999999999999999999999998654322111111   01235677888886642            


Q ss_pred             cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|+|||+||......     ..+++...+++|+.++.++++++.+.    + .+|+++||...+..           
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  152 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-----------  152 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------
Confidence            126899999998542211     12246678899999999998877543    2 38999999776422           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                           ..+.+.|+.+|++.|.+++.+.++.   +++++++|||.+.++.
T Consensus       153 -----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~  196 (276)
T PRK05875        153 -----HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL  196 (276)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence                 1223679999999999999988764   7999999999997764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.80  E-value=2.4e-18  Score=154.07  Aligned_cols=199  Identities=12%  Similarity=0.042  Sum_probs=137.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+........... ....+..+.+|+.+..            ..+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            356789999999999999999999999999999998642111111111 1235778888887641            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|++|||||......    ..+++++.+++|+.++.++++++..    .+  .++|++||...+...             
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------  147 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-------------  147 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-------------
Confidence            999999999754322    1235677899999999999988753    33  389999998766321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .....|+.+|++.+.+++.++++.   |+++++++||.|..+....-...  ......+.+..         ....+
T Consensus       148 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~---------~~~~~  213 (248)
T TIGR01832       148 ---IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD--EDRNAAILERI---------PAGRW  213 (248)
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC--hHHHHHHHhcC---------CCCCC
Confidence               112469999999999999998874   89999999999987642100000  01111111111         12358


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      +..+|++++++.
T Consensus       214 ~~~~dva~~~~~  225 (248)
T TIGR01832       214 GTPDDIGGPAVF  225 (248)
T ss_pred             cCHHHHHHHHHH
Confidence            899999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.7e-19  Score=159.60  Aligned_cols=161  Identities=14%  Similarity=0.105  Sum_probs=120.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      .+++|+||||+|+||++++++|+++|++|++++|+.....+ ..... ...+.++.+|+.++.            +.++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLAD-LAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            35689999999999999999999999999999986443221 11111 234667778876531            23689


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||||......    ..+++++.+++|+.++.++++.+    ++.+. ++|++||...+...                
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------------  143 (275)
T PRK08263         80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF----------------  143 (275)
T ss_pred             EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC----------------
Confidence            9999999764332    22357789999999998888776    44554 89999997655321                


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|+..+.+++.++.+   .|++++++|||.+..+.
T Consensus       144 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~  186 (275)
T PRK08263        144 PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW  186 (275)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence            11257999999999999888765   59999999999987764

>PRK07985 oxidoreductase; Provisional

Probab=99.80  E-value=3.2e-18  Score=157.56  Aligned_cols=200  Identities=16%  Similarity=0.112  Sum_probs=137.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-cccccccc--CCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      .+++++++||||+|+||.+++++|+++|++|++++|..... .+.+....  ...++.++.+|+.++.            
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46778999999999999999999999999999887643221 11111111  1235667888887642            


Q ss_pred             cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +.++|++|||||......     ..+++++.+++|+.++.++++++...   +.+||++||...+...            
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~------------  193 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS------------  193 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC------------
Confidence            246899999998642111     23457789999999999999988653   3489999998765321            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                          .....|+.+|++.+.+++.++.+   +|+++++++||.|.++......  ........+.+..+         ...
T Consensus       194 ----~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~---------~~r  258 (294)
T PRK07985        194 ----PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG--QTQDKIPQFGQQTP---------MKR  258 (294)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC--CCHHHHHHHhccCC---------CCC
Confidence                11257999999999999999876   5999999999999998531110  01112222222111         123


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +...+|++++++.
T Consensus       259 ~~~pedva~~~~f  271 (294)
T PRK07985        259 AGQPAELAPVYVY  271 (294)
T ss_pred             CCCHHHHHHHHHh
Confidence            5678999998764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.2e-18  Score=157.20  Aligned_cols=199  Identities=18%  Similarity=0.114  Sum_probs=140.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.....+.....+  ...++.++.+|+.+..            .
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5678899999999999999999999999999999886533222221111  1235677888886642            2


Q ss_pred             CCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|+||||||......     ..+++...+++|+.++.++++++...   +.+||++||...|....            
T Consensus       123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~------------  190 (290)
T PRK06701        123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE------------  190 (290)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC------------
Confidence            36899999999643221     12346778999999999999998653   24899999987663211            


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                          ....|+.+|++.+.+++.++.+.   |+++++++||.++.+....   ......+..+.+         ......+
T Consensus       191 ----~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~---~~~~~~~~~~~~---------~~~~~~~  254 (290)
T PRK06701        191 ----TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS---DFDEEKVSQFGS---------NTPMQRP  254 (290)
T ss_pred             ----CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc---ccCHHHHHHHHh---------cCCcCCC
Confidence                12569999999999999998764   8999999999998874311   111122222211         1123457


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|++++++.
T Consensus       255 ~~~~dva~~~~~  266 (290)
T PRK06701        255 GQPEELAPAYVF  266 (290)
T ss_pred             cCHHHHHHHHHH
Confidence            889999998864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=3.2e-18  Score=153.48  Aligned_cols=197  Identities=16%  Similarity=0.133  Sum_probs=132.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC-
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE-  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~-  180 (340)
                      .++++++||||+|+||+++++.|+++|++|+++++......+.+..... .++.++.+|+.++.            +.+ 
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4567999999999999999999999999998876543222222222222 35777888886631            123 


Q ss_pred             CCEEEEcccCCCCC-------C---CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPV-------H---YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~-------~---~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      +|++|||||.....       .   ..+++.+.+++|+.++.++++++..    .+. ++|++||....           
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------  150 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------  150 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------
Confidence            89999999853210       0   1234567899999999999998853    333 89999985422           


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                           .+..+...|+.+|.+.|.+++.++++   .|++++.++||.+..+...   ..........+.+..+        
T Consensus       151 -----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~~~~~~~~~~~~~~~~--------  214 (253)
T PRK08642        151 -----NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---AATPDEVFDLIAATTP--------  214 (253)
T ss_pred             -----CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh---ccCCHHHHHHHHhcCC--------
Confidence                 12233467999999999999999876   4899999999998765321   1111122222222211        


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                       ...+.+.+|+++++..
T Consensus       215 -~~~~~~~~~va~~~~~  230 (253)
T PRK08642        215 -LRKVTTPQEFADAVLF  230 (253)
T ss_pred             -cCCCCCHHHHHHHHHH
Confidence             1347889999998764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.80  E-value=5.6e-19  Score=160.64  Aligned_cols=158  Identities=15%  Similarity=0.067  Sum_probs=116.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      ++++++||||+|+||.+++++|+++|++|++++|+.+...+.     ...++.++.+|+.+..            ..++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-----~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-----ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-----HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            467999999999999999999999999999999865332211     1124677788886642            23689


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHH----HHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLG----LAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~----~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||||......    ..++++..+++|+.++..+++    .+++.+. ++|++||...+..                .
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------------~  140 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY----------------T  140 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC----------------C
Confidence            9999999754322    223577889999998655544    5566664 8999999653211                0


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       141 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  183 (273)
T PRK06182        141 PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW  183 (273)
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence            11256999999999998877654   58999999999998874

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4e-18  Score=153.50  Aligned_cols=196  Identities=14%  Similarity=0.067  Sum_probs=134.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~  183 (340)
                      +++++||||+|+||.++++.|+++|++|++++|+...... +...+...++..+.+|+.+..            +.++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAA-FADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4589999999999999999999999999999986543222 111222345778888886642            125899


Q ss_pred             EEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       184 Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |||++|.......    .+.+...+.+|+.++.++++++.    +.+. +||++||...+...                 
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------  143 (257)
T PRK07074         81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-----------------  143 (257)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-----------------
Confidence            9999997543221    12345667899999999988873    3343 79999996432110                 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|++.+.+++.++++.   |+++++++||.++++........ ...+.....+.         ...++|++++
T Consensus       144 ~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~  213 (257)
T PRK07074        144 GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA-NPQVFEELKKW---------YPLQDFATPD  213 (257)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc-ChHHHHHHHhc---------CCCCCCCCHH
Confidence            01469999999999999998654   79999999999988753110000 11222222111         2235799999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |++++++.
T Consensus       214 d~a~~~~~  221 (257)
T PRK07074        214 DVANAVLF  221 (257)
T ss_pred             HHHHHHHH
Confidence            99999875

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.2e-18  Score=154.21  Aligned_cols=196  Identities=17%  Similarity=0.111  Sum_probs=131.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++||||+|+||.+++++|+++|++|+++.+..+.........+  ....+.++.+|+.+..            +.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            3589999999999999999999999998877654322222121111  1234677888887642            2368


Q ss_pred             CEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc------C--CeEEEEeCcc-cccCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV------G--ARFLLTSTSE-VYGDPLQHPQKETYW  247 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~------~--~~~i~~SS~~-v~g~~~~~~~~E~~~  247 (340)
                      |+||||||......     ..+++...+++|+.++.++++++.+.      +  .+||++||.. .++.+.         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------  152 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------
Confidence            99999999754322     12346688999999999988887542      1  2699999964 443211         


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                             ....|+.+|++.|.+++.++.+.   |++++++|||.++++....   .....++..+....++.        
T Consensus       153 -------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~---~~~~~~~~~~~~~~p~~--------  214 (248)
T PRK06123        153 -------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHAS---GGEPGRVDRVKAGIPMG--------  214 (248)
T ss_pred             -------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhc---cCCHHHHHHHHhcCCCC--------
Confidence                   01359999999999999988764   8999999999999985321   11122222232222221        


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                       -+.+++|++++++.
T Consensus       215 -~~~~~~d~a~~~~~  228 (248)
T PRK06123        215 -RGGTAEEVARAILW  228 (248)
T ss_pred             -CCcCHHHHHHHHHH
Confidence             13468999988764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.6e-18  Score=151.91  Aligned_cols=159  Identities=18%  Similarity=0.153  Sum_probs=120.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .++++++++||||+|+||.+++++|+++|++|++++|+....        ....+.++.+|+.++.            +.
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            356788999999999999999999999999999999864321        1234677888886642            24


Q ss_pred             CCCEEEEcccCCCCC------CCcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPV------HYKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~------~~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      ++|+||||||.....      ...++++..+++|+.++.++++++    ++.+. ++|++||...+...           
T Consensus        77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------  145 (260)
T PRK06523         77 GVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL-----------  145 (260)
T ss_pred             CCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----------
Confidence            689999999954211      123457788999999998887665    34443 89999997644210           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          ......|+.+|.+.+.+++.++.+   .|+++++++||.|.++.
T Consensus       146 ----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~  189 (260)
T PRK06523        146 ----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA  189 (260)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence                012367999999999999998865   38999999999998875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=7.7e-18  Score=150.84  Aligned_cols=197  Identities=15%  Similarity=0.042  Sum_probs=132.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++++||||+|+||.++++.|+++|++|+++ +|+.+... .....+  ...++.++.+|+.++.            ..
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAE-ETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999998774 55432221 111111  1245778888887752            13


Q ss_pred             CCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+|||+||........    +.+...+++|+.++.++++++.+    .+. +||++||...+.               
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------  146 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR---------------  146 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc---------------
Confidence            589999999865332222    23455788999999999888864    333 899999965432               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                       +......|+.+|++.|.+++.++.+   .++++++++||.+..+........  ..+........         ....+
T Consensus       147 -~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~~---------~~~~~  214 (250)
T PRK08063        147 -YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR--EELLEDARAKT---------PAGRM  214 (250)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc--hHHHHHHhcCC---------CCCCC
Confidence             1122367999999999999988765   589999999999977642110000  11111111111         11237


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ++++|++++++.
T Consensus       215 ~~~~dva~~~~~  226 (250)
T PRK08063        215 VEPEDVANAVLF  226 (250)
T ss_pred             cCHHHHHHHHHH
Confidence            889999998764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.79  E-value=5.2e-18  Score=158.05  Aligned_cols=180  Identities=14%  Similarity=0.106  Sum_probs=124.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----c-------CC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----L-------LE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~-------~~  180 (340)
                      .++++++||||+|+||.+++++|+++|++|++++|+.....+..... .....+.++.+|+.+..     +       .+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            45679999999999999999999999999999998654322211111 11235778888886642     1       24


Q ss_pred             CCEEEEcccCCCCC-----CCcCChhhHHHHHHHHHHHHHHHHHH----cC---CeEEEEeCcccccCC--CCCCCC--C
Q 019470          181 VDQIYHLACPASPV-----HYKFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDP--LQHPQK--E  244 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~~a~~----~~---~~~i~~SS~~v~g~~--~~~~~~--E  244 (340)
                      +|+||||||.....     ...+.++..+++|+.|+.++++++..    .+   .+||++||...+...  +..+..  +
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            89999999975331     12235778899999999999887754    22   389999997654311  010000  0


Q ss_pred             C--C-------------CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh----CCcEEEEEeCceeCCC
Q 019470          245 T--Y-------------WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGPR  293 (340)
Q Consensus       245 ~--~-------------~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~----gi~~~ivRp~~i~G~~  293 (340)
                      +  +             +....+..+...|+.||.+.+.+++.+++++    |+++++++||+|++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            0  0             0011334566889999999998888887654    7999999999998643

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.2e-18  Score=151.95  Aligned_cols=164  Identities=19%  Similarity=0.136  Sum_probs=121.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .++++++|||||+|+||.++++.|+++|++|++++|+.....+... .+....++++.+|+.+..            ..+
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP-GVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHH-HHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            3567899999999999999999999999999999997544322221 122234566777775531            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+|||++|......    ..+.+.+.+..|+.++.++++++.    +.+. +||++||...++..              
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  148 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG--------------  148 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC--------------
Confidence            899999998643221    122356678899999999988874    3444 89999998766431              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        .....|+.+|...+.+++.++.+   .+++++++|||+++++.
T Consensus       149 --~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~  191 (239)
T PRK12828        149 --PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP  191 (239)
T ss_pred             --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence              12257999999999998887654   58999999999999873

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.79  E-value=8.6e-18  Score=145.55  Aligned_cols=162  Identities=16%  Similarity=0.112  Sum_probs=123.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      .++|.++||||+++||.+++++|.+.|++|+++.|+.+... .+...+....+.....|+++..            +.++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~-~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLE-ALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHH-HHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            45678999999999999999999999999999999754332 2333333356788888888762            2469


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |++|||||......    ..++|+.++++|+.|.++..++.    .+.+. ++|++||.+..                .+
T Consensus        83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----------------~~  146 (246)
T COG4221          83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----------------YP  146 (246)
T ss_pred             cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----------------cc
Confidence            99999999765422    23469999999999999988876    33333 99999996521                12


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ....+.|+.+|+....+.+.+..+   .+++++.+-||.+-..
T Consensus       147 y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~  189 (246)
T COG4221         147 YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETT  189 (246)
T ss_pred             CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecce
Confidence            222378999999999998888766   4899999999998553

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.2e-18  Score=154.80  Aligned_cols=199  Identities=15%  Similarity=0.048  Sum_probs=134.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCccccccccc-CCCceEEeeCccccccc-------------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPLL-------------  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~-------------  178 (340)
                      +++++++||||+|+||.++++.|+++|++|+++ .|+.....+...... ....+.++.+|+.++..             
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            456799999999999999999999999999875 454322111111111 12357788888876421             


Q ss_pred             -----CCCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHHHc--C-CeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 -----LEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV--G-ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 -----~~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~~--~-~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                           .++|+|||+||........    +.++..+++|+.++.++++++.+.  . .+||++||..++..          
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~----------  153 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLG----------  153 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCC----------
Confidence                 2589999999975433222    234677889999999999988763  2 38999999776532          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                            ......|+.+|.+.|.+++.++++   .++++++++||.++++-......  -..+. ....+.        ..
T Consensus       154 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~-~~~~~~--------~~  216 (254)
T PRK12746        154 ------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD--DPEIR-NFATNS--------SV  216 (254)
T ss_pred             ------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc--ChhHH-HHHHhc--------CC
Confidence                  122367999999999999888765   48999999999998874210000  01111 111111        11


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+++++|+++++..
T Consensus       217 ~~~~~~~~dva~~~~~  232 (254)
T PRK12746        217 FGRIGQVEDIADAVAF  232 (254)
T ss_pred             cCCCCCHHHHHHHHHH
Confidence            2357789999998763

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=4.9e-18  Score=153.14  Aligned_cols=200  Identities=17%  Similarity=0.100  Sum_probs=136.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      +.+++++|||||+|+||.++++.|+++|++|++++|+...... ....+  ...++.++.+|+.++.            .
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEE-AAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999986432211 11111  1235678888887642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~-----~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|+|||+||......    ..+.+.+.+++|+.++.++++++.+.     +. +||++||...+.....         
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~---------  158 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP---------  158 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc---------
Confidence            36899999998643222    22346678899999999999987654     43 8999999654422111         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         ...+...|+.+|+..|.+++.++++   .|+++++++||.+-.+..    ..+++.+...+..+.++..        
T Consensus       159 ---~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~----~~~~~~~~~~~~~~~~~~~--------  223 (259)
T PRK08213        159 ---EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT----RGTLERLGEDLLAHTPLGR--------  223 (259)
T ss_pred             ---cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch----hhhhHHHHHHHHhcCCCCC--------
Confidence               0012367999999999999998875   379999999998866531    2233444444444433332        


Q ss_pred             ccccHHHHHHHHH
Q 019470          326 SFQFVSDLVRLTE  338 (340)
Q Consensus       326 ~~v~v~Dva~a~~  338 (340)
                       +...+|+++++.
T Consensus       224 -~~~~~~va~~~~  235 (259)
T PRK08213        224 -LGDDEDLKGAAL  235 (259)
T ss_pred             -CcCHHHHHHHHH
Confidence             334677766543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.79  E-value=1.8e-18  Score=154.88  Aligned_cols=163  Identities=20%  Similarity=0.137  Sum_probs=121.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++|||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.+..            +.++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5679999999999999999999999999999998754322211110 01235778888886531            2358


Q ss_pred             CEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |+|||++|.......    ...++..+++|+.++.++++++.    +.+. +||++||...+....              
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~--------------  147 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS--------------  147 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC--------------
Confidence            999999986432221    22356789999999999988775    3443 899999977654321              


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                        ....|+.+|++.+.+++.++.+.   ++++++++||.++++.
T Consensus       148 --~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~  189 (250)
T TIGR03206       148 --GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL  189 (250)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence              12579999999999999888764   8999999999999874

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.9e-18  Score=155.72  Aligned_cols=163  Identities=18%  Similarity=0.208  Sum_probs=122.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++++|||||+|+||.+++++|+++|++|++++|+.+..  .....+  ...++.++.+|+.++.            .
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD--EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH--HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            56788999999999999999999999999999999875433  111111  1235788889987642            1


Q ss_pred             CCCCEEEEcccCCCCCCC---cCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~---~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      .++|+||||||.......   .++++..+++|+.++.++.+.+..    .+.+|+++||...+..               
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------  146 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG---------------  146 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC---------------
Confidence            368999999996432221   135677899999999999888753    2247999999654311               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       ......|+.+|+..|.+++.++.+   .+++++.++||.|+++.
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~  190 (258)
T PRK08628        147 -QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL  190 (258)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence             112367999999999999998764   48999999999999874

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.5e-18  Score=154.54  Aligned_cols=196  Identities=18%  Similarity=0.114  Sum_probs=136.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +.++++++||||+|+||.++++.|+++|++|++++|+....  ..........+..+.+|+.+..            +.+
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA--EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            45778999999999999999999999999999999865321  1111222345567888886642            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcc-cccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~-v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..+++...+++|+.++.++++++..    .+ .+||++||.. .++.              
T Consensus        90 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  155 (255)
T PRK06841         90 IDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL--------------  155 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC--------------
Confidence            899999999753222    1234567899999999999998764    23 3899999965 3322              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .....|+.+|.+.+.+++.++.+   .|++++.++||.+..+....   .+.........++.         ....+
T Consensus       156 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~---------~~~~~  220 (255)
T PRK06841        156 ---ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK---AWAGEKGERAKKLI---------PAGRF  220 (255)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc---ccchhHHHHHHhcC---------CCCCC
Confidence               11257999999999999998876   48999999999998764210   00011111111111         12347


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|++++++.
T Consensus       221 ~~~~~va~~~~~  232 (255)
T PRK06841        221 AYPEEIAAAALF  232 (255)
T ss_pred             cCHHHHHHHHHH
Confidence            899999998764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.3e-18  Score=152.85  Aligned_cols=160  Identities=14%  Similarity=0.068  Sum_probs=118.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC-CCceEEeeCcccccc------------cCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      +++|+||||+|+||.+++++|+++|++|++++|+.+...+ ....+. ..++.++.+|+.++.            ...+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQA-FAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4689999999999999999999999999999987533221 111111 126788889987642            12489


Q ss_pred             EEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHH----HHHHcCC-eEEEEeCcccc-cCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLG----LAKRVGA-RFLLTSTSEVY-GDPLQHPQKETYWGNVN  251 (340)
Q Consensus       183 ~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~----~a~~~~~-~~i~~SS~~v~-g~~~~~~~~E~~~~~~~  251 (340)
                      ++|||||......     ..+++...+++|+.|+.++++    .+++.+. +||++||...+ +.               
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------------  145 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------------  145 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------------
Confidence            9999999754221     123467889999999999777    4445553 89999996533 21               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        .....|+.+|+..+.+++.++.+   +|+++++++||.+.++.
T Consensus       146 --~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  188 (257)
T PRK07024        146 --PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM  188 (257)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence              11257999999999999888744   58999999999998874

>PRK09186 flagellin modification protein A; Provisional

Probab=99.79  E-value=1.1e-17  Score=150.43  Aligned_cols=203  Identities=16%  Similarity=0.130  Sum_probs=132.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------cC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++|+++||||+|+||.++++.|+++|++|++++|+.+...+...   .......+.++.+|+.++.            ..
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56799999999999999999999999999999987543221111   1112234566788886641            12


Q ss_pred             CCCEEEEcccCCCCC---C----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPV---H----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~---~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      ++|+|||||+.....   .    ..+.+...+++|+.++..+++++.    +.+. +||++||...+..... ...++  
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-~~~~~--  159 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-EIYEG--  159 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-hhccc--
Confidence            489999999753211   1    112356778899988877766553    3444 8999999654432211 11121  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                         .+......|+.+|.+.+.+.+.++.+   .++++++++||.++++..        ..+........         ..
T Consensus       160 ---~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~--------~~~~~~~~~~~---------~~  219 (256)
T PRK09186        160 ---TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP--------EAFLNAYKKCC---------NG  219 (256)
T ss_pred             ---cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC--------HHHHHHHHhcC---------Cc
Confidence               12222247999999999999888775   489999999999876531        12222222211         11


Q ss_pred             EccccHHHHHHHHHhC
Q 019470          325 RSFQFVSDLVRLTETI  340 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~~  340 (340)
                      ..+++++|++++++.+
T Consensus       220 ~~~~~~~dva~~~~~l  235 (256)
T PRK09186        220 KGMLDPDDICGTLVFL  235 (256)
T ss_pred             cCCCCHHHhhhhHhhe
Confidence            2478999999988753

>PRK08264 short chain dehydrogenase; Validated

Probab=99.78  E-value=1.4e-17  Score=148.19  Aligned_cols=159  Identities=19%  Similarity=0.143  Sum_probs=120.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQ  183 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~  183 (340)
                      ..++++++||||+|+||+++++.|+++|+ +|++++|+.....+      ...++.++.+|+.+..        ...+|+
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~   76 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTI   76 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCE
Confidence            34567999999999999999999999999 99999986543222      2245777888886641        235899


Q ss_pred             EEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       184 Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |||++|......     ..+++...+++|+.++.++++++..    .+. +||++||...+..                .
T Consensus        77 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~----------------~  140 (238)
T PRK08264         77 LVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN----------------F  140 (238)
T ss_pred             EEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC----------------C
Confidence            999999732211     2234667889999999999998753    333 7999999765531                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|...|.+++.++.+.   +++++++|||.+.++.
T Consensus       141 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        141 PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence            223679999999999999887653   8999999999997763

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.78  E-value=1e-17  Score=152.77  Aligned_cols=165  Identities=17%  Similarity=0.134  Sum_probs=121.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.+...+...... ...++..+.+|+.+..            +.
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4677899999999999999999999999999999986433222111110 1235677888886642            24


Q ss_pred             CCCEEEEcccCCCCCC-------------------CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCccccc
Q 019470          180 EVDQIYHLACPASPVH-------------------YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYG  235 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-------------------~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g  235 (340)
                      ++|++|||||......                   ..+++...+++|+.++..+++++    ++.+ .+||++||...+.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~  166 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT  166 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC
Confidence            6899999999643221                   12346778999999988776654    3343 3899999977653


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       236 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      .                ......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       167 ~----------------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~  211 (278)
T PRK08277        167 P----------------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ  211 (278)
T ss_pred             C----------------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence            1                1223579999999999999998764   8999999999998874

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.4e-17  Score=149.95  Aligned_cols=167  Identities=16%  Similarity=0.085  Sum_probs=122.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++++++||||+|+||.+++++|+++|++|++++|+.+...+.....+  ...++..+.+|+.++.            
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678899999999999999999999999999999986543212111111  1235677888886642            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccc-cCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY-GDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~-g~~~~~~~~E~~~  247 (340)
                      +.++|++|||||......    ..++++..+++|+.++..+++++.    +.+ .+||++||...+ +...         
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------  154 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------  154 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------
Confidence            235899999999754322    223577889999999988877653    333 389999996532 2110         


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                            .....|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       155 ------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~  197 (254)
T PRK06114        155 ------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM  197 (254)
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence                  01257999999999999998865   48999999999998874

>PRK08324 short chain dehydrogenase; Validated

Probab=99.78  E-value=2e-18  Score=175.96  Aligned_cols=207  Identities=16%  Similarity=0.092  Sum_probs=142.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+.+++++||||+|+||.++++.|+++|++|++++|+................+..+.+|+.++.            ..+
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45778999999999999999999999999999999975432221111111136778888886642            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..+.++..+++|+.++.++++++.    +.+  .+||++||...+..              
T Consensus       499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~--------------  564 (681)
T PRK08324        499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP--------------  564 (681)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC--------------
Confidence            899999999754332    223467789999999999977774    333  48999999654321              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCcee-CCCCCCCCccHHHHHHHHHHhCCCe----EEecCCc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTY-GPRMCIDDGRVVSNFVAQALRKEPL----TVYGDGK  322 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~-G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~  322 (340)
                        ......|+.+|+..+.+++.++.+.   |+++++++|+.|| +.+...  ..+..  ......+...    ..+.++.
T Consensus       565 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~--~~~~~--~~~~~~g~~~~~~~~~~~~~~  638 (681)
T PRK08324        565 --GPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT--GEWIE--ARAAAYGLSEEELEEFYRARN  638 (681)
T ss_pred             --CCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc--chhhh--hhhhhccCChHHHHHHHHhcC
Confidence              1123679999999999999988764   6999999999998 654311  11100  0011111111    1234455


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ..+.+++++|++++++.
T Consensus       639 ~l~~~v~~~DvA~a~~~  655 (681)
T PRK08324        639 LLKREVTPEDVAEAVVF  655 (681)
T ss_pred             CcCCccCHHHHHHHHHH
Confidence            66789999999999864

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.78  E-value=2.8e-18  Score=150.09  Aligned_cols=197  Identities=19%  Similarity=0.215  Sum_probs=150.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      ...|-.+-|+|||||+|++++.+|.+.|-.|++-.|..+.....+.-.-.-.++-+...|+.|+     ..+...+|||+
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINL  137 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINL  137 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEe
Confidence            4567789999999999999999999999999999886554443333222334566666676665     34568999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      .|.    .++...-++.++|+.+...+.+.|++.|+ |||++|+.+.   +               ....+-|-.+|+++
T Consensus       138 IGr----d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga---n---------------v~s~Sr~LrsK~~g  195 (391)
T KOG2865|consen  138 IGR----DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA---N---------------VKSPSRMLRSKAAG  195 (391)
T ss_pred             ecc----ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccc---c---------------ccChHHHHHhhhhh
Confidence            983    34444446678999999999999999999 9999998651   1               12236799999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee-EccccHHHHHHHHHhC
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT-RSFQFVSDLVRLTETI  340 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~v~Dva~a~~~~  340 (340)
                      |..+++.    ..+.+|+||..|||..     .+|+..+.....+-..+++++.|+.+ ...|||-|||.+++.+
T Consensus       196 E~aVrda----fPeAtIirPa~iyG~e-----Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnA  261 (391)
T KOG2865|consen  196 EEAVRDA----FPEATIIRPADIYGTE-----DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNA  261 (391)
T ss_pred             HHHHHhh----CCcceeechhhhcccc-----hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHh
Confidence            9999765    4567999999999963     56666666655566788888887554 5899999999998753

>PRK06398 aldose dehydrogenase; Validated

Probab=99.78  E-value=2.2e-17  Score=149.09  Aligned_cols=154  Identities=18%  Similarity=0.110  Sum_probs=118.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+....          ..+..+.+|+.++.            +.+
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   72 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGR   72 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999864321          24677788886641            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++..    .+ .++|++||...+..               
T Consensus        73 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  137 (258)
T PRK06398         73 IDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV---------------  137 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC---------------
Confidence            999999999753222    1234677899999999999887743    33 48999999765421               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~  292 (340)
                       ......|+.+|++.+.+++.++.+.  ++++++++||.+-.+
T Consensus       138 -~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~  179 (258)
T PRK06398        138 -TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP  179 (258)
T ss_pred             -CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence             1223689999999999999998764  499999999988665

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=150.13  Aligned_cols=165  Identities=14%  Similarity=0.019  Sum_probs=121.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .++++++|||||+|+||.+++++|+++|++|++++|+.....+...+.. ...++..+.+|+.++.            +.
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999999987443222111110 1235667778886642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..+++++.+++|+.++.++++++..    .+ .+||++||.....               
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------  150 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL---------------  150 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc---------------
Confidence            5899999999643221    2345778999999999998887754    33 3899999964221               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       +......|+.+|++.+.+++.++.+   +|+++++++||.+..+.
T Consensus       151 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~  195 (254)
T PRK08085        151 -GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM  195 (254)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence             1112367999999999999999876   48999999999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.8e-17  Score=149.47  Aligned_cols=163  Identities=15%  Similarity=0.019  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ..+|++|||||+|+||.+++++|+++|++|+++++......+.....+  ....+.++.+|+.+..            ..
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356799999999999999999999999999888765332222111111  1245778888887632            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC-----CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG-----ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~-----~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++....     .++|+++|...+..              
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~--------------  152 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL--------------  152 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC--------------
Confidence            5899999999654321    223467889999999999998876532     37888887544321              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~  292 (340)
                        ......|+.+|.+.|.+++.++++.  ++++++++||.+...
T Consensus       153 --~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~  194 (258)
T PRK09134        153 --NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS  194 (258)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence              1112479999999999999998764  489999999998764

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=149.05  Aligned_cols=199  Identities=19%  Similarity=0.130  Sum_probs=135.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ..++++++||||+|+||+++++.|+++|++|+++.++.+...+...+.+  ...++.++.+|+.++.            +
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3466799999999999999999999999999888775432222111111  1245788888887641            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      .++|+|||+||......    ..++++..+++|+.++.++++++.+.   +.+||++||...+.                
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------  145 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL----------------  145 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC----------------
Confidence            36899999999653221    22346678999999999999888653   23899999865432                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                      +......|+.+|...+.+++.++.+   .++++++++||.+-.+....   .........+.+..+.         .-+.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~---~~~~~~~~~~~~~~~~---------~~~~  213 (245)
T PRK12937        146 PLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFN---GKSAEQIDQLAGLAPL---------ERLG  213 (245)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcc---cCCHHHHHHHHhcCCC---------CCCC
Confidence            1122367999999999999988765   38999999999887653110   0112233333333222         1245


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|++++++.
T Consensus       214 ~~~d~a~~~~~  224 (245)
T PRK12937        214 TPEEIAAAVAF  224 (245)
T ss_pred             CHHHHHHHHHH
Confidence            67898888653

>PRK06196 oxidoreductase; Provisional

Probab=99.78  E-value=7.9e-18  Score=156.41  Aligned_cols=174  Identities=17%  Similarity=0.102  Sum_probs=123.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++|+||||+|+||.+++++|+++|++|++++|+.+...+... .+  ..+.++.+|+.+..            ..+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~-~l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALA-GI--DGVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh--hhCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999999997543222111 11  13677888887642            246


Q ss_pred             CCEEEEcccCCCCCC--CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|+||||||......  ..+.++..+++|+.++..+++++    ++.+ .++|++||.......    ..+++.....+.
T Consensus       100 iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~----~~~~~~~~~~~~  175 (315)
T PRK06196        100 IDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP----IRWDDPHFTRGY  175 (315)
T ss_pred             CCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC----CCccccCccCCC
Confidence            999999999754322  23457788999999977666644    4454 499999996532211    111110111233


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .+...|+.||.+.+.+++.++++   .|+++++++||.+.++.
T Consensus       176 ~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~  218 (315)
T PRK06196        176 DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL  218 (315)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence            44568999999999999888764   48999999999999875

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.77  E-value=2.1e-17  Score=147.36  Aligned_cols=197  Identities=17%  Similarity=0.166  Sum_probs=134.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++++++||||+|+||.++++.|+++|++|+++.|+...........+  ...++.++.+|+.+..            +
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3466799999999999999999999999999888886543222211111  1245777888886642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCc-ccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTS-EVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~-~v~g~~~~~~~~E~~~~  248 (340)
                      .++|+|||+||......    ..+.+.+.+..|+.++.++++++...    +. +|+++||. ++++..           
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~-----------  150 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP-----------  150 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------
Confidence            36899999999754322    11245677889999999999888653    33 79999995 344421           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                            ....|+.+|.+.+.+++.++++   .++++++++||.+.++..    ......+........+         ..
T Consensus       151 ------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~----~~~~~~~~~~~~~~~~---------~~  211 (248)
T PRK05557        151 ------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMT----DALPEDVKEAILAQIP---------LG  211 (248)
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccc----cccChHHHHHHHhcCC---------CC
Confidence                  1257999999999988887653   489999999998865431    1111223333322221         12


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+++++|+++++..
T Consensus       212 ~~~~~~~va~~~~~  225 (248)
T PRK05557        212 RLGQPEEIASAVAF  225 (248)
T ss_pred             CCcCHHHHHHHHHH
Confidence            36788999988754

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.4e-17  Score=149.65  Aligned_cols=158  Identities=17%  Similarity=0.113  Sum_probs=120.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||.++++.|+++|++|++++|+.+.       ......+.++.+|+.++.            ..+
T Consensus         3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999986533       011235677888886641            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c-C-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V-G-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~-~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..+.+++.+++|+.++.++++++..    . + .+||++||...+..              
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~--------------  141 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP--------------  141 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC--------------
Confidence            799999999643222    1234678899999999999998754    1 2 38999999764321              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~  293 (340)
                        ......|+.+|.+.|.+++.++.+.  .++++.++||.|..+.
T Consensus       142 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~  184 (252)
T PRK07856        142 --SPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ  184 (252)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence              1123679999999999999998764  3899999999997764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.8e-17  Score=145.92  Aligned_cols=191  Identities=15%  Similarity=0.121  Sum_probs=134.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih  186 (340)
                      ++++|+++||||+|+||.++++.|+++|++|++++|+.....        ..++..+.+|+.++      .+.++|+|||
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~   73 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCN   73 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence            356789999999999999999999999999999998643211        23567888888654      2346899999


Q ss_pred             cccCCCC---C--CCcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          187 LACPASP---V--HYKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       187 ~Ag~~~~---~--~~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      |||....   .  ...++++..+++|+.++.++++++..    .+ .+||++||...+...                ...
T Consensus        74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~~~  137 (235)
T PRK06550         74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG----------------GGG  137 (235)
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------------CCC
Confidence            9996421   1  12235678899999999999988753    23 389999996543210                112


Q ss_pred             ChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHH-HHHHHHHHhCCCeEEecCCceeEccccHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVV-SNFVAQALRKEPLTVYGDGKQTRSFQFVSD  332 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D  332 (340)
                      ..|+.+|...+.+++.++.+.   |+++++++||.+.++....   .+. ..+...+.+..+         ...+...+|
T Consensus       138 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~  205 (235)
T PRK06550        138 AAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAA---DFEPGGLADWVARETP---------IKRWAEPEE  205 (235)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccc---ccCchHHHHHHhccCC---------cCCCCCHHH
Confidence            579999999999999888764   8999999999998874211   111 112222222211         233677899


Q ss_pred             HHHHHHh
Q 019470          333 LVRLTET  339 (340)
Q Consensus       333 va~a~~~  339 (340)
                      ++++++.
T Consensus       206 ~a~~~~~  212 (235)
T PRK06550        206 VAELTLF  212 (235)
T ss_pred             HHHHHHH
Confidence            9988764

>PRK08589 short chain dehydrogenase; Validated

Probab=99.77  E-value=1.8e-17  Score=150.81  Aligned_cols=163  Identities=18%  Similarity=0.097  Sum_probs=119.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++|++|||||+|+||.++++.|+++|++|++++|+ +...+..... ....++..+.+|+.++.            +.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999987 3222111111 01235778888887641            235


Q ss_pred             CCEEEEcccCCCCC-C----CcCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~-~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||..... .    ..+.++..+++|+.++..+++++.    +.+.++|++||...+..               
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  147 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA---------------  147 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC---------------
Confidence            89999999975321 1    122467788999999887777653    33458999999764421               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                       ......|+.+|++.+.+++.++.+.   |++++++.||.|..+.
T Consensus       148 -~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  191 (272)
T PRK08589        148 -DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL  191 (272)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence             1122679999999999999998754   7999999999997763

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.3e-17  Score=149.71  Aligned_cols=163  Identities=15%  Similarity=0.071  Sum_probs=116.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc---------------
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL---------------  177 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~---------------  177 (340)
                      ++|+++||||+|+||.+++++|+++|++|+++++......+.....+  ....+..+..|+.+..               
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            46799999999999999999999999999887543222111111111  1123455666665421               


Q ss_pred             -c--CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 -L--LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 -~--~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                       .  .++|++|||||.......    .+.++..+++|+.++..+++++...   +.+||++||...+..           
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------  151 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-----------  151 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-----------
Confidence             1  269999999996432221    2236788899999999999887653   238999999765421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                           ......|+.+|++.+.+++.++.+.   |++++++.||.|.++.
T Consensus       152 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~  195 (252)
T PRK12747        152 -----LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM  195 (252)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence                 1122579999999999999988764   8999999999998874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.77  E-value=2.4e-17  Score=148.39  Aligned_cols=198  Identities=16%  Similarity=0.152  Sum_probs=136.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++++|+||||+|+||.++++.|+++|++|++++|..+.... ....+  ...++.++.+|+.+..            +
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH-VVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4568899999999999999999999999999999886443221 11111  1235677788886642            2


Q ss_pred             CCCCEEEEcccCCCCCCCc---CChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~---~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|++|||||.......+   +++...+++|+.++.++++++.    +.+ .++|++||.....               
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------  151 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN---------------  151 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC---------------
Confidence            3689999999975432222   3466679999999999999885    333 3899999965321               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                       +......|+.+|++.+.+++.++.+   .+++++++.||.+-.+...   ....+.+...+.+..+         ...+
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~---~~~~~~~~~~~~~~~~---------~~~~  218 (255)
T PRK06113        152 -KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---SVITPEIEQKMLQHTP---------IRRL  218 (255)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc---cccCHHHHHHHHhcCC---------CCCC
Confidence             1122357999999999999998765   4899999999998766421   1111222233332221         1236


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ..++|++++++.
T Consensus       219 ~~~~d~a~~~~~  230 (255)
T PRK06113        219 GQPQDIANAALF  230 (255)
T ss_pred             cCHHHHHHHHHH
Confidence            688999988764

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.7e-17  Score=150.56  Aligned_cols=155  Identities=19%  Similarity=0.156  Sum_probs=118.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~  183 (340)
                      +++++||||+|+||.+++++|+++|++|++++|+......       ..++.++.+|+.++.            +.++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            4689999999999999999999999999999996433211       135677888886642            235899


Q ss_pred             EEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       184 Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ||||||.......    .++++..+++|+.|+.++++++    ++.+. +||++||...+..                ..
T Consensus        77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~  140 (270)
T PRK06179         77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP----------------AP  140 (270)
T ss_pred             EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC----------------CC
Confidence            9999997543222    2346789999999999998875    44554 8999999654421                11


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ....|+.+|...+.+++.++.+   .|+++++++||.+.++.
T Consensus       141 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~  182 (270)
T PRK06179        141 YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF  182 (270)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence            2257999999999999988755   59999999999998864

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.4e-17  Score=151.44  Aligned_cols=161  Identities=19%  Similarity=0.094  Sum_probs=117.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.+...+ ....+  ..+.++.+|+.++.            ..+
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKE-TAAEL--GLVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh--ccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999986433221 11111  14677788886642            246


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||.......    .+.+.+.+++|+.++.++++.+.    +.+. +||++||...+..               
T Consensus        79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  143 (273)
T PRK07825         79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP---------------  143 (273)
T ss_pred             CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC---------------
Confidence            8999999997543321    22466789999999888877663    4454 8999999764321               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                       ......|+.+|+..+.+.+.+..+   .|+++++++||.+-.+
T Consensus       144 -~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~  186 (273)
T PRK07825        144 -VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTE  186 (273)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcch
Confidence             122367999999999888887655   4899999999988554

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8.1e-18  Score=148.35  Aligned_cols=187  Identities=14%  Similarity=0.109  Sum_probs=127.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----cc---CCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL---LEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~---~~~D~Vih~  187 (340)
                      +|+++||||+|+||.++++.|+++ ++|++++|+.....+ +.+.  ...++++.+|+.+.     .+   .++|+|||+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDE-LAAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH-HHHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            578999999999999999999999 999999996433211 1111  12467788888764     12   269999999


Q ss_pred             ccCCCCCCC----cCChhhHHHHHHHHHHH----HHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          188 ACPASPVHY----KFNPVKTIKTNVVGTLN----MLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       188 Ag~~~~~~~----~~~~~~~~~~Nv~g~~~----ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      +|.......    .+++...+++|+.+..+    +++.+++.+.++|++||...++..                .....|
T Consensus        79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~----------------~~~~~y  142 (227)
T PRK08219         79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRAN----------------PGWGSY  142 (227)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcC----------------CCCchH
Confidence            997543221    12356678899988554    444455556699999997655321                122579


Q ss_pred             HHHHHHHHHHHHHHHHh-hC-CcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHH
Q 019470          260 DEGKRTAETLTMDYHRG-AG-VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~-~g-i~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      +.+|...+.+++.++.+ .+ ++++.++||.+.++..        ..+...  .+.  .     .....+++++|+++++
T Consensus       143 ~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~--------~~~~~~--~~~--~-----~~~~~~~~~~dva~~~  205 (227)
T PRK08219        143 AASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ--------RGLVAQ--EGG--E-----YDPERYLRPETVAKAV  205 (227)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh--------hhhhhh--hcc--c-----cCCCCCCCHHHHHHHH
Confidence            99999999998887654 24 8999999998765421        111110  011  0     1124589999999998


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      +.
T Consensus       206 ~~  207 (227)
T PRK08219        206 RF  207 (227)
T ss_pred             HH
Confidence            75

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.7e-17  Score=148.04  Aligned_cols=161  Identities=18%  Similarity=0.098  Sum_probs=117.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++|+++||||+|+||.++++.|+++|++|+++.+..+...+.+.    ..++.++.+|+.++.            ..+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----EKGVFTIKCDVGNRDQVKKSKEVVEKEFGR   79 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----hCCCeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999988765432222221    124677888887642            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHH----HHHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGL----AKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~----a~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++..+++.    +++.+ .++|++||...++...             
T Consensus        80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-------------  146 (255)
T PRK06463         80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA-------------  146 (255)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-------------
Confidence            899999999753221    2234678899999997666544    44344 3899999976653210             


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                        .....|+.+|++.+.+++.++.+   .|+++++++||.+-.+
T Consensus       147 --~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~  188 (255)
T PRK06463        147 --EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETD  188 (255)
T ss_pred             --CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCc
Confidence              11257999999999999999875   4899999999998654

>PRK09242 tropinone reductase; Provisional

Probab=99.77  E-value=1.9e-17  Score=149.06  Aligned_cols=165  Identities=12%  Similarity=0.109  Sum_probs=123.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc---ccCCCceEEeeCccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPNFELIRHDVVEP------------L  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~------------~  177 (340)
                      ++++|+++||||+|+||.++++.|+++|++|++++|+.+...+...+   .....++..+.+|+.++            .
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999865432221111   11124577788888663            2


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|+|||+||......    ..+++++.+++|+.++.++++++.    +.+ .+||++||...+..            
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~------------  153 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH------------  153 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC------------
Confidence            346899999999643211    234577889999999999988874    334 38999999765432            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          ......|+.+|...+.+++.++.+   .|++++.++||.+.++.
T Consensus       154 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~  197 (257)
T PRK09242        154 ----VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL  197 (257)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence                122367999999999999988765   48999999999998875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=150.07  Aligned_cols=164  Identities=12%  Similarity=0.066  Sum_probs=121.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+++||.+++++|+++|++|++++|............ ...++.++.+|+.++.            +.+
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   83 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGH   83 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            456789999999999999999999999999999887532111111111 1235777888887642            246


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|++|||||......    ..++++..+++|+.++..+.+++..    .+  .++|++||...+...             
T Consensus        84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------  150 (251)
T PRK12481         84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-------------  150 (251)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-------------
Confidence            899999999754322    2245788999999999988887643    33  389999997654221             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         .....|+.+|++.+.+++.++.+   +|++++.++||.+-.+.
T Consensus       151 ---~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~  193 (251)
T PRK12481        151 ---IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDN  193 (251)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence               11247999999999999988875   48999999999986653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.77  E-value=3e-17  Score=146.54  Aligned_cols=196  Identities=17%  Similarity=0.089  Sum_probs=128.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCccccccccc-CCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      |++++||||+|+||.+++++|+++|++|+++ .|+.....+...... ...++.++.+|+.++.            ..++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            3589999999999999999999999999875 443222111111100 1234677888887642            2358


Q ss_pred             CEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc--------CCeEEEEeCccc-ccCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEV-YGDPLQHPQKETYW  247 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~--------~~~~i~~SS~~v-~g~~~~~~~~E~~~  247 (340)
                      |+|||++|......     ..++++..+++|+.++.++++++...        +.+||++||... ++.+.         
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~---------  151 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG---------  151 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC---------
Confidence            99999999643222     11235678999999998887766432        136999999654 32210         


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                             ....|+.+|...+.+++.++.+   .+++++++|||.+|++....  ... ...........+..        
T Consensus       152 -------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~--~~~-~~~~~~~~~~~~~~--------  213 (247)
T PRK09730        152 -------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHAS--GGE-PGRVDRVKSNIPMQ--------  213 (247)
T ss_pred             -------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccccc--CCC-HHHHHHHHhcCCCC--------
Confidence                   0135999999999999888754   48999999999999985321  111 12222232222211        


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                       -..+++|++++++.
T Consensus       214 -~~~~~~dva~~~~~  227 (247)
T PRK09730        214 -RGGQPEEVAQAIVW  227 (247)
T ss_pred             -CCcCHHHHHHHHHh
Confidence             12368999988764

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.7e-17  Score=148.05  Aligned_cols=165  Identities=14%  Similarity=0.093  Sum_probs=122.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      .+.++++++||||+|+||.++++.|+++|++|++++|+.+...+ +...+  ...++.++.+|+.+..            
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKE-LRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            35678899999999999999999999999999999986543221 11111  1235677888876531            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c---------CCeEEEEeCcccccCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V---------GARFLLTSTSEVYGDPLQH  240 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~---------~~~~i~~SS~~v~g~~~~~  240 (340)
                      ..++|++|||+|......    ..++++..+++|+.++.++++++..    .         +.++|++||...+..    
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----  159 (258)
T PRK06949         84 AGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV----  159 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC----
Confidence            236899999999643322    1235777899999999999887752    1         138999999765421    


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                                  ......|+.+|.+.+.+++.++.+   .++++++++||.|+++.
T Consensus       160 ------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~  203 (258)
T PRK06949        160 ------------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI  203 (258)
T ss_pred             ------------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence                        122367999999999999998765   48999999999999875

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.4e-17  Score=147.43  Aligned_cols=198  Identities=19%  Similarity=0.132  Sum_probs=137.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++++||||+|+||.++++.|+++|++|++++|+.+...+..... ....+++++.+|+.++.            ..+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999988654322211111 01235788888887642            146


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+|||++|......    ..+.++..++.|+.++.++++++...    + .+||++||...+...              
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------  150 (250)
T PRK12939         85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA--------------  150 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC--------------
Confidence            999999999754322    22345677889999999999887542    2 389999996543211              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                        .....|+.+|...|.+++.++.+   .++++++++||.+..+.......   ..+......+         .....++
T Consensus       151 --~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~---------~~~~~~~  216 (250)
T PRK12939        151 --PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA---DERHAYYLKG---------RALERLQ  216 (250)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC---hHHHHHHHhc---------CCCCCCC
Confidence              11257999999999999988754   48999999999987764311111   1222222221         2234578


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|++++++.
T Consensus       217 ~~~dva~~~~~  227 (250)
T PRK12939        217 VPDDVAGAVLF  227 (250)
T ss_pred             CHHHHHHHHHH
Confidence            99999999875

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.76  E-value=1.6e-17  Score=148.96  Aligned_cols=159  Identities=17%  Similarity=0.146  Sum_probs=116.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      |+++||||+|+||.++++.|+++|++|++++|+.+.... +.... ..++.++.+|+.+..            +.++|+|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999996543221 11111 235677888886641            2369999


Q ss_pred             EEcccCCCCC-----CCcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPV-----HYKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ||+||.....     ...+++++.+++|+.++..+++.+    ++.+. ++|++||...+.                +..
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~~  142 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----------------PYA  142 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC----------------CCC
Confidence            9999964211     123356788999999977766655    44554 899999965431                112


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ....|+.+|...+.+.+.++.+   .++++++++||.+.|..
T Consensus       143 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~  184 (248)
T PRK10538        143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE  184 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence            2367999999999999988765   37999999999998764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2e-17  Score=149.09  Aligned_cols=165  Identities=15%  Similarity=0.119  Sum_probs=116.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---cccc--CCCceEEeeCcccccc----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHF--GNPNFELIRHDVVEPL----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~---~~~~--~~~~~~~~~~D~~~~~----------  177 (340)
                      .+++++++||||+|+||.++++.|+++|++|+++++......+..   ...+  ...++.++.+|+.+..          
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999888876533222111   1111  1235778888886641          


Q ss_pred             --cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 --LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 --~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                        +.++|++||+||......    ..++++..+++|+.++..+++++...   +.++++++|+......           
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------  153 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------  153 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------
Confidence              236899999999743222    22347788999999999999988653   2366665433221110           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                           .....|+.+|++.|.+++.++++.   |+++++++||.+.++.
T Consensus       154 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~  196 (257)
T PRK12744        154 -----PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF  196 (257)
T ss_pred             -----CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence                 112579999999999999998774   7999999999997763

>PRK12743 oxidoreductase; Provisional

Probab=99.76  E-value=3e-17  Score=147.83  Aligned_cols=162  Identities=16%  Similarity=0.082  Sum_probs=120.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++||||+|+||.+++++|+++|++|+++.+......+.....+  ...++.++.+|+.+..            +.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999988764332222211111  1246788889987642            2358


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      |+||||+|......    ..+++.+.+++|+.++.++++++...    +  .+||++||....                .
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~----------------~  145 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH----------------T  145 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc----------------C
Confidence            99999999754322    22356788999999999999887542    2  389999996422                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +..+...|+.+|.+.+.+++.++.+   .|++++.++||.+.++.
T Consensus       146 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~  190 (256)
T PRK12743        146 PLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM  190 (256)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence            2223368999999999999988765   48999999999999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.8e-17  Score=150.50  Aligned_cols=164  Identities=21%  Similarity=0.147  Sum_probs=121.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC-CCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++++++||||+|+||.++++.|+++|++|++++|+.+...+.. ..+. ...+..+.+|+.+..            +.
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~-~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALA-AELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999998654322211 1111 234455567876641            24


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+||||||......    ..+++++.+++|+.++.++++++..    .+.+||++||...+..               
T Consensus        85 ~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------------  149 (296)
T PRK05872         85 GIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA---------------  149 (296)
T ss_pred             CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC---------------
Confidence            6899999999754322    1234677899999999999988753    2348999999765422               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       ......|+.+|+..+.+++.++.+   .|++++++.||.+..+.
T Consensus       150 -~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  193 (296)
T PRK05872        150 -APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDL  193 (296)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchh
Confidence             112267999999999999988754   58999999999997763

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.76  E-value=5.2e-17  Score=145.17  Aligned_cols=196  Identities=17%  Similarity=0.099  Sum_probs=129.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++|+++||||+|+||++++++|+++|++|+++.+............+  ....+..+.+|+.+..            +.+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999998886543222221111111  1234666778886531            246


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||.....                
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------  145 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----------------  145 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----------------
Confidence            899999999754221    22357788999999977766655    44454 899999964321                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                      +......|+.+|++.+.+++.++++   .++++++++||.+.++...    .....++..+....+         ...+.
T Consensus       146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~----~~~~~~~~~~~~~~~---------~~~~~  212 (246)
T PRK12938        146 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK----AIRPDVLEKIVATIP---------VRRLG  212 (246)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhh----hcChHHHHHHHhcCC---------ccCCc
Confidence            1112367999999999998888765   4899999999999887421    111222333322221         22355


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      ..+|++++++.
T Consensus       213 ~~~~v~~~~~~  223 (246)
T PRK12938        213 SPDEIGSIVAW  223 (246)
T ss_pred             CHHHHHHHHHH
Confidence            67888887653

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=4.3e-17  Score=145.98  Aligned_cols=196  Identities=14%  Similarity=0.082  Sum_probs=134.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++++||||+|+||.++++.|+++|++|++++|+.....+..... ....++.++.+|+.++.            ..+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56779999999999999999999999999999998653322211110 01245677888876531            135


Q ss_pred             CCEEEEcccCCCCCC-------------CcCChhhHHHHHHHHHHHHHHHHH----Hc-C-CeEEEEeCcccccCCCCCC
Q 019470          181 VDQIYHLACPASPVH-------------YKFNPVKTIKTNVVGTLNMLGLAK----RV-G-ARFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-------------~~~~~~~~~~~Nv~g~~~ll~~a~----~~-~-~~~i~~SS~~v~g~~~~~~  241 (340)
                      +|+|||+||......             ..+.+...+++|+.++.++++.+.    +. . .+++++||...++..    
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~----  158 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM----  158 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC----
Confidence            899999999643211             123456688899999987776543    22 2 379999997766432    


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEe
Q 019470          242 QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  318 (340)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (340)
                                   ....|+.+|.+.+.+++.++++   .+++++.++||.+.++...    ...+.+...+..+.+    
T Consensus       159 -------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~----~~~~~~~~~~~~~~~----  217 (253)
T PRK08217        159 -------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA----AMKPEALERLEKMIP----  217 (253)
T ss_pred             -------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc----ccCHHHHHHHHhcCC----
Confidence                         1267999999999999998765   4899999999999887421    112333333333222    


Q ss_pred             cCCceeEccccHHHHHHHHHh
Q 019470          319 GDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       319 ~~g~~~~~~v~v~Dva~a~~~  339 (340)
                           ...+.+++|+++++..
T Consensus       218 -----~~~~~~~~~~a~~~~~  233 (253)
T PRK08217        218 -----VGRLGEPEEIAHTVRF  233 (253)
T ss_pred             -----cCCCcCHHHHHHHHHH
Confidence                 2346788999998764

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.76  E-value=3.7e-17  Score=147.94  Aligned_cols=163  Identities=13%  Similarity=0.065  Sum_probs=121.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++++++||||+|+||.++++.|+++|++|++++|+.+...+ +...+  ...++.++.+|+.++.            +
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDE-VAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999997433221 11111  1235778888887642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH-----cC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR-----VG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~-----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|+|||+||......    ..+++...+.+|+.++.++++++..     .+ .+||++||.....             
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-------------  152 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-------------  152 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-------------
Confidence            36899999998643322    1235778899999999999999864     33 3899999954221             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~  292 (340)
                         +......|+.+|++.+.+++.++.+.  +++++.++||.+..+
T Consensus       153 ---~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~  195 (263)
T PRK07814        153 ---AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS  195 (263)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence               11223679999999999999988764  689999999998765

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6e-18  Score=154.31  Aligned_cols=156  Identities=17%  Similarity=0.202  Sum_probs=116.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c--------CCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L--------LEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~--------~~~D  182 (340)
                      +++++||||+|+||.+++++|+++|++|++++|+.+...+ +    ....++++.+|+.+..     +        .++|
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~-l----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA-L----EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-H----HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            5689999999999999999999999999999996543221 1    1124677888887642     1        2589


Q ss_pred             EEEEcccCCCCCCCc----CChhhHHHHHHHH----HHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYK----FNPVKTIKTNVVG----TLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g----~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||||........    ++++..+++|+.|    +..+++.+++.+. +||++||...+.                +.
T Consensus        79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------~~  142 (277)
T PRK05993         79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV----------------PM  142 (277)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC----------------CC
Confidence            999999975443222    2356789999999    5556666677664 899999965431                12


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      .....|+.+|++.|.+++.++.+   .|+++++++||.+-.+
T Consensus       143 ~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        143 KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            23368999999999999888644   5999999999998765

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2e-17  Score=149.47  Aligned_cols=160  Identities=21%  Similarity=0.248  Sum_probs=120.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+ ..... ..++.++.+|+.++.            +..+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAA-VAASL-GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999997543222 11111 235778888887642            2368


Q ss_pred             CEEEEcccCCCCCC---CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCccc-ccCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEV-YGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       182 D~Vih~Ag~~~~~~---~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v-~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |++|||||......   ..+++++.+++|+.++.++++++..    .+.++|++||... ++.                 
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------------  144 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ-----------------  144 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----------------
Confidence            99999999643221   2335778899999999999887653    2248999999653 221                 


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      .....|+.+|+..+.+++.++.+   .|+++++++||.+..+
T Consensus       145 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~  186 (261)
T PRK08265        145 TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR  186 (261)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence            11257999999999999998866   3899999999988665

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.9e-17  Score=144.81  Aligned_cols=152  Identities=20%  Similarity=0.135  Sum_probs=115.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c------CCCCE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L------LEVDQ  183 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~------~~~D~  183 (340)
                      ++|+++||||+|+||.++++.|+++|++|++++|.....   .       ..+++..|+.+..     +      .++|+
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~-------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   71 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---F-------PGELFACDLADIEQTAATLAQINEIHPVDA   71 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---c-------CceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence            457899999999999999999999999999999975431   0       1145666765531     1      15899


Q ss_pred             EEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       184 Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ||||+|.......    .+++...+++|+.++.++.+++    ++.+. +||++||..+|+...                
T Consensus        72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------  135 (234)
T PRK07577         72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD----------------  135 (234)
T ss_pred             EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC----------------
Confidence            9999997543322    2346678899999988887665    34444 899999987664321                


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       ...|+.+|...|.+++.++.+   .|+++++++||.+..+.
T Consensus       136 -~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~  176 (234)
T PRK07577        136 -RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL  176 (234)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence             257999999999999888755   49999999999998764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.75  E-value=6.2e-17  Score=145.94  Aligned_cols=163  Identities=12%  Similarity=0.133  Sum_probs=121.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++++|||||+|+||.+++++|+++|++|++++|+. . .+...+.+  ....+.++.+|+.+..            .
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-N-WDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-H-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45778999999999999999999999999999999862 1 11111111  1245778888887642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|++|||||......    ..++++..+++|+.++.++++++.    +.+ .++|++||...+...            
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  157 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG------------  157 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC------------
Confidence            36899999999754222    123567889999999888887664    333 389999997654221            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          .....|+.+|++.+.+++.++++   .|+++++++||.+..+.
T Consensus       158 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  200 (258)
T PRK06935        158 ----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN  200 (258)
T ss_pred             ----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence                11257999999999999999875   48999999999987764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=4.1e-17  Score=145.31  Aligned_cols=164  Identities=15%  Similarity=0.040  Sum_probs=120.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.....+...+. ....++.++.+|+.++.            +.+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45679999999999999999999999999999999754322111111 11236778888886642            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+|||++|......    ..++++..+++|+.++.++++++..    .+ .++|++||...+..               
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------  149 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG---------------  149 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC---------------
Confidence            999999999754322    1234567899999999999888753    33 37999999654321               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       ......|+.+|.+.+.+++.++.+   .|+++++++||.+.++.
T Consensus       150 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~  193 (239)
T PRK07666        150 -AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM  193 (239)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence             112256999999999999888754   48999999999998764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.75  E-value=7e-17  Score=145.30  Aligned_cols=201  Identities=12%  Similarity=0.046  Sum_probs=137.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      ...++++++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3567889999999999999999999999999999999753322111110 01235778888887642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+|||++|......    ..+++++.+++|+.++.++++++.+    .+. +||++||...+..             
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------  153 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA-------------  153 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC-------------
Confidence            35799999999654322    1234667899999999999977643    443 8999999653311             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|.+.+.+++.++.+   .++++++++||.+.++.....  ..-..+...+.+..+         ...
T Consensus       154 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~~~~---------~~~  219 (256)
T PRK06124        154 ---RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM--AADPAVGPWLAQRTP---------LGR  219 (256)
T ss_pred             ---CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh--ccChHHHHHHHhcCC---------CCC
Confidence               111267999999999999988765   389999999999998752110  000112222222211         123


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|++.+++.
T Consensus       220 ~~~~~~~a~~~~~  232 (256)
T PRK06124        220 WGRPEEIAGAAVF  232 (256)
T ss_pred             CCCHHHHHHHHHH
Confidence            7889999988764

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.75  E-value=6e-17  Score=145.60  Aligned_cols=164  Identities=16%  Similarity=0.076  Sum_probs=119.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.+...+.. ..+  ...++.++.+|+.++.            .
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV-AEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            346779999999999999999999999999999999754322211 111  1235677888886642            2


Q ss_pred             CCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++|||||......     ..++++..+++|+.++..+++++    ++.+ .++|++||...+..            
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~------------  149 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA------------  149 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc------------
Confidence            36899999999753211     22346788999999888776654    4444 38999999754421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                         +......|+.+|++.+.+++.++.+.   |+++++++||.+-.+
T Consensus       150 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  193 (254)
T PRK07478        150 ---GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP  193 (254)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence               11123679999999999999988764   799999999999766

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.7e-17  Score=152.18  Aligned_cols=178  Identities=16%  Similarity=0.096  Sum_probs=122.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---cccccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++++|+||||+|+||.+++++|+++|++|++++|+.+...+.   +........+.++.+|+.+..            
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            46778999999999999999999999999999999865432211   111112345778888987642            


Q ss_pred             cCCCCEEEEcccCCCCCC--CcCChhhHHHHHHHH----HHHHHHHHHHcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH--YKFNPVKTIKTNVVG----TLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g----~~~ll~~a~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +.++|+||||||......  ..+.++..+++|+.+    +..+++.+++.+ .+||++||...+... ....++..+  .
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~-~~~~~~~~~--~  169 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRA-AIHFDDLQW--E  169 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccC-CCCccccCc--c
Confidence            236899999999754332  234567789999999    555566666655 499999997643211 111111111  1


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEE--EeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIA--RIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~iv--Rp~~i~G~~  293 (340)
                      .+..+...|+.||++.+.+++.++++.   +++++++  .||.|..+.
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            233445789999999999999988764   6666555  699887653

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-17  Score=148.46  Aligned_cols=163  Identities=14%  Similarity=0.027  Sum_probs=121.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||+|+||.++++.|+++|++|++++|+.+...+......   ...++.++.+|+.++.            .
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999999996543322111110   1345778888987642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|++|||||......    ..++++..+++|+.++.++++++..    .+ .++|++||...+..             
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  151 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-------------  151 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC-------------
Confidence            36999999999643221    2345778899999999999888743    33 38999999754321             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                         ......|+.+|++.+.+++.++.+.   |++++.++||.+-.+
T Consensus       152 ---~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~  194 (260)
T PRK07063        152 ---IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ  194 (260)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence               1122579999999999999998764   899999999998665

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.75  E-value=7.6e-17  Score=146.37  Aligned_cols=161  Identities=18%  Similarity=0.058  Sum_probs=118.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~D~  183 (340)
                      |+++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.+..            ..++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999998654322211111 11235677888886642            236999


Q ss_pred             EEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       184 Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ||||||........    +++++.+++|+.++.++++.+    ++.+. +||++||...+..                ..
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~~  144 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ----------------GP  144 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC----------------CC
Confidence            99999975433222    245668899998888876654    55554 8999999765421                12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ....|+.+|++.+.+.+.++.+   .|+++++++||.+.++.
T Consensus       145 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~  186 (270)
T PRK05650        145 AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL  186 (270)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence            2368999999999999888876   38999999999998774

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.1e-17  Score=151.45  Aligned_cols=175  Identities=18%  Similarity=0.102  Sum_probs=125.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++++++||||+++||.+++++|+++|++|++++|+.+...+...   .......+.++.+|+.+..            
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678899999999999999999999999999999997543222111   1112235778888886631            


Q ss_pred             cCCCCEEEEcccCCCCCC---CcCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCccc-ccCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEV-YGDPLQHPQKETYWGN  249 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~---~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v-~g~~~~~~~~E~~~~~  249 (340)
                      ..++|++|||||......   ..+.++..+.+|+.+...+++.+.    +...++|++||... ++........++    
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~----  166 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE----  166 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc----
Confidence            235899999999764322   335678899999999888877664    33358999999653 322111111111    


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                       .+..+...|+.||.+.+.+.+.++++     .|++++++.||.|-.+
T Consensus       167 -~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        167 -RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             -ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence             23344578999999999999988753     3799999999998665

>PRK07069 short chain dehydrogenase; Validated

Probab=99.75  E-value=2.9e-17  Score=147.08  Aligned_cols=160  Identities=16%  Similarity=0.100  Sum_probs=114.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc----CCCceEEeeCcccccc------------cCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++||||+|+||.++++.|+++|++|++++|+.....+.+.+.+    ....+..+.+|+.+..            +.++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999987322222221111    1112334666775532            3468


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHH----HHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVV----GTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~----g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |+||||||......    ..+++...+++|+.    ++..+++++++.+. +||++||...+...               
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~---------------  145 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE---------------  145 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC---------------
Confidence            99999999754322    12245677889988    66777777777664 89999997655321               


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh-----CCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~-----gi~~~ivRp~~i~G~~  293 (340)
                       .....|+.+|...+.+++.++.+.     +++++.++||.+.++.
T Consensus       146 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~  190 (251)
T PRK07069        146 -PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI  190 (251)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence             112579999999999999887652     4899999999998875

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.75  E-value=4.6e-17  Score=145.16  Aligned_cols=162  Identities=13%  Similarity=0.027  Sum_probs=120.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++||||+|+||.+++++|+++|++|++++|+.+...+ +....  ...++.++.+|+.+..            ..+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEA-LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999997543222 11111  1246778889987642            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+|||+||......    ..++++..+++|+.++.++++.+.    +.+ .++|++||...++..              
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------  149 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF--------------  149 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC--------------
Confidence            899999999653222    223467789999999988887763    333 389999998766321              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        .....|+.+|...+.+++.++++   .|++++++|||.+-.+.
T Consensus       150 --~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~  192 (241)
T PRK07454        150 --PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL  192 (241)
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence              22367999999999999887654   48999999999987763

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.3e-17  Score=148.36  Aligned_cols=164  Identities=18%  Similarity=0.160  Sum_probs=119.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +.++++++||||+|+||.+++++|+++|++|++++|+.+.......... ...++.++.+|+.++.            +.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG   85 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4677899999999999999999999999999999987543221111110 1224567788886532            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+||||||......    ..+++...+++|+.++.++++++..    .+.+|+++||...+..               
T Consensus        86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~---------------  150 (264)
T PRK07576         86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP---------------  150 (264)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC---------------
Confidence            5899999998543221    2234667889999999999988754    3348999999654311               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                       ......|+.+|.+.+.+++.++.+   .|+++++++||.+.+.
T Consensus       151 -~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t  193 (264)
T PRK07576        151 -MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT  193 (264)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence             112267999999999999998765   4899999999998753

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.75  E-value=8e-17  Score=144.59  Aligned_cols=165  Identities=18%  Similarity=0.120  Sum_probs=118.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.........+.. ....+..+.+|+.+..            +.
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999986433221111110 1234667778876531            23


Q ss_pred             CCCEEEEcccCCCCC-----CCcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPV-----HYKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~-----~~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+|||+||.....     ...++++..+++|+.++..+++++    ++.+ .+++++||...+.              
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------------  150 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS--------------  150 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC--------------
Confidence            589999999853211     122346678999999999888776    3334 3899999864321              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                        +......|+.+|++.+.+++.++.+.   |++++.+.||.+..+.
T Consensus       151 --~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~  195 (252)
T PRK07035        151 --PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF  195 (252)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence              11223679999999999999998753   8999999999986653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.74  E-value=4.1e-17  Score=145.07  Aligned_cols=165  Identities=17%  Similarity=0.120  Sum_probs=125.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++++++|||||++||.+++++|+++|++|+.+.|+.+...+...+..  ....++++.+|+.++.            .
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            3567899999999999999999999999999999997654332222111  2346889999997752            1


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ..+|++|||||......    ..++..+++++|+.+...+..+.    .+.+. ++|+++|...+               
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~---------------  147 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL---------------  147 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc---------------
Confidence            25999999999875543    23346679999999987776665    44444 89999997755               


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       .|....+.|+.||+..-.+.+.+..|   .|+.+..+.||.+..+.
T Consensus       148 -~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f  193 (265)
T COG0300         148 -IPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEF  193 (265)
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccc
Confidence             23333478999999999998888766   48999999999987754

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.74  E-value=7.4e-17  Score=144.98  Aligned_cols=198  Identities=15%  Similarity=0.045  Sum_probs=134.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.+...+ ....+  ...++..+.+|+.++.            +
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEK-LADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999986543221 11111  1235677788887642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++|||||......    ..+.++..+++|+.++..+++++..    .+  .++|++||....-.  .         
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--~---------  153 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII--N---------  153 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC--C---------
Confidence            47999999999754322    1234677889999999999888743    22  36899988642100  0         


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         .......|+.+|++.+.+++.++.+   .|+++++++||.|-.+...    .. ......+.+..+         ..
T Consensus       154 ---~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~----~~-~~~~~~~~~~~~---------~~  216 (253)
T PRK05867        154 ---VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE----PY-TEYQPLWEPKIP---------LG  216 (253)
T ss_pred             ---CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccc----cc-hHHHHHHHhcCC---------CC
Confidence               0011257999999999999999876   3899999999999766421    11 112222222211         12


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+...+|++++++.
T Consensus       217 r~~~p~~va~~~~~  230 (253)
T PRK05867        217 RLGRPEELAGLYLY  230 (253)
T ss_pred             CCcCHHHHHHHHHH
Confidence            36788999988764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.3e-17  Score=147.32  Aligned_cols=159  Identities=17%  Similarity=0.138  Sum_probs=113.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc-----cC-CCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----LL-EVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----~~-~~D~Vih~  187 (340)
                      ++++|||||+|+||.++++.|+++|++|++++|+.....+ +...  .....+.++.+|+.++.     +. ++|+||||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~   80 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTA-LRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNN   80 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEEC
Confidence            4689999999999999999999999999999986432211 1110  11234677788886642     22 79999999


Q ss_pred             ccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          188 ACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       188 Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      ||......    ..+.++..+++|+.++.++.+.+    ++.+. +||++||...+...                .....
T Consensus        81 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------------~~~~~  144 (257)
T PRK09291         81 AGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------------PFTGA  144 (257)
T ss_pred             CCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------------CCcch
Confidence            99653222    12235678889999887766544    44454 89999996532110                11257


Q ss_pred             HHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeC
Q 019470          259 YDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G  291 (340)
                      |+.+|...|.+++.+..+   .|++++++|||.+..
T Consensus       145 Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t  180 (257)
T PRK09291        145 YCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT  180 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence            999999999998887654   599999999998743

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.74  E-value=8.9e-17  Score=145.19  Aligned_cols=164  Identities=15%  Similarity=0.061  Sum_probs=119.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++++||||+|+||.++++.|+++|++|++++|.... .+..... ....++.++.+|+.++.            +.+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999986431 1111111 11235678888887641            236


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||.......    .+.+++.+++|+.++.++++++..    .+ .+||++||.....               .
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------~  147 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM---------------V  147 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------c
Confidence            8999999997533221    223556799999999999988753    23 3899999854210               0


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|...|.+++.++.+.   +++++.++||.+.++.
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~  192 (263)
T PRK08226        148 ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM  192 (263)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence            11112579999999999999988764   8999999999998863

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.5e-17  Score=145.37  Aligned_cols=158  Identities=16%  Similarity=0.119  Sum_probs=116.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c----CCCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L----LEVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~----~~~D~Vih  186 (340)
                      +++++||||+|+||.+++++|+++|++|++++|+.+...+ +...  ..++.++.+|+.+..     +    .+.|.+||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQ--SANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHh--cCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            3589999999999999999999999999999996432211 1111  134667778886642     1    23689999


Q ss_pred             cccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcc-cccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          187 LACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      |||......    ..+++++.+++|+.++.++++++...   +.++|++||.. .++.                 .....
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-----------------~~~~~  140 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-----------------PRAEA  140 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC-----------------CCCch
Confidence            998543221    12235678999999999999998753   45799999854 3221                 12257


Q ss_pred             HHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          259 YDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      |+.+|+..+.+++.++.+   .|+++++++||.++++.
T Consensus       141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~  178 (240)
T PRK06101        141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL  178 (240)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence            999999999999988743   58999999999999875

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.74  E-value=4.8e-17  Score=146.75  Aligned_cols=160  Identities=23%  Similarity=0.135  Sum_probs=119.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-------------cCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-------------LLEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------------~~~~D  182 (340)
                      ||++|||||+|+||.++++.|+++|++|++++|+.+...+ +.......++.++.+|+.+..             ..++|
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAA-LAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            4689999999999999999999999999999986543222 111122346788888887631             23579


Q ss_pred             EEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcc-cccCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +||||||.......    .++++..+++|+.++.++++++..    .+ .+||++||.. .++...              
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  145 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG--------------  145 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC--------------
Confidence            99999997543322    234678899999999999888743    33 4899999954 443221              


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ...|+.+|+..+.+++.++.+   .++++++++||.+-.+.
T Consensus       146 ---~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~  186 (260)
T PRK08267        146 ---LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAM  186 (260)
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence               257999999999999988754   48999999999986653

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-16  Score=143.01  Aligned_cols=199  Identities=16%  Similarity=0.122  Sum_probs=135.2

Q ss_pred             CCCCCeEEEEcCch-HHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG-~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~-----------  177 (340)
                      .+++++++||||+| .||.++++.|+++|++|++++|+.....+...   ......++.++.+|+.++.           
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999997 79999999999999999999886543222111   1112245778888886641           


Q ss_pred             -cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                       +.++|+||||||......    ..+++.+.+++|+.++..+++++..    .+  .++|++||...+.           
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----------  162 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----------  162 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----------
Confidence             236899999999643222    1235677889999999988887643    32  3788888854321           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                           +......|+.+|++.+.+++.++.+   +|+++++++||.+..+.....   ........+.+..++        
T Consensus       163 -----~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~---~~~~~~~~~~~~~~~--------  226 (262)
T PRK07831        163 -----AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV---TSAELLDELAAREAF--------  226 (262)
T ss_pred             -----CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc---cCHHHHHHHHhcCCC--------
Confidence                 1122357999999999999999876   589999999999988743110   012223333332221        


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                       .-+...+|++++++.
T Consensus       227 -~r~~~p~~va~~~~~  241 (262)
T PRK07831        227 -GRAAEPWEVANVIAF  241 (262)
T ss_pred             -CCCcCHHHHHHHHHH
Confidence             236677888888754

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.74  E-value=1.7e-16  Score=141.14  Aligned_cols=156  Identities=15%  Similarity=0.093  Sum_probs=114.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~  183 (340)
                      +|++|||||+|+||.+++++|+++|++|++++|+.....+.+.    ...+.++.+|+.++.            +.++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR----QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            4689999999999999999999999999999987543222221    123567778876531            235899


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC---CeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|||||......    ..+++++.+++|+.++..+.+.+..    .+   .++|++||.....                +
T Consensus        78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~----------------~  141 (236)
T PRK06483         78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK----------------G  141 (236)
T ss_pred             EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc----------------C
Confidence            999999643221    2345778999999999887766643    33   3799998854221                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYG  291 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G  291 (340)
                      ......|+.+|++.|.+++.++.+.  ++++++|+||.+..
T Consensus       142 ~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~  182 (236)
T PRK06483        142 SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILF  182 (236)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceec
Confidence            1112579999999999999998875  69999999999854

>PRK08643 acetoin reductase; Validated

Probab=99.74  E-value=5.6e-17  Score=145.93  Aligned_cols=161  Identities=19%  Similarity=0.165  Sum_probs=117.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      +|+++||||+|+||.++++.|+++|++|++++|+.........+.. ...++.++.+|+.++.            +.++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5689999999999999999999999999999986533222111110 1235677888887642            23689


Q ss_pred             EEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCccc-ccCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v-~g~~~~~~~~E~~~~~~~  251 (340)
                      +||||||.......    .++++..+++|+.++..+++++.+    .+  .++|++||... ++.+              
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  147 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP--------------  147 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC--------------
Confidence            99999986532221    234567899999998887777643    22  48999999653 3211              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ....|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       148 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        148 ---ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             ---CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence               1257999999999999988865   48999999999998764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.74  E-value=1.3e-16  Score=142.26  Aligned_cols=160  Identities=15%  Similarity=0.112  Sum_probs=117.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++++||||+|+||.+++++|+++|+.|++.+|+.+...+.. ... ..++.++.+|+.+..            +.++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA-AEL-GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45679999999999999999999999999988877543322211 111 235677788886531            3468


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcc-cccCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~  251 (340)
                      |+||||||......    ..+++...+++|+.++.++++++.+    .+ .+||++||.. .++.+.             
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  148 (245)
T PRK12936         82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG-------------  148 (245)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC-------------
Confidence            99999999754321    2235778899999999999887643    23 3899999954 443211             


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                          ...|+.+|.+.+.+++.++.+   .++++++++||.+..+
T Consensus       149 ----~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~  188 (245)
T PRK12936        149 ----QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA  188 (245)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence                156999999999998887664   4899999999988654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.74  E-value=2.4e-17  Score=150.89  Aligned_cols=171  Identities=18%  Similarity=0.218  Sum_probs=111.1

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc------CC-CCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL------LE-VDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~------~~-~D~Vih~Ag~  190 (340)
                      +|+||||||+||++++++|+++|++|++++|++.....   .......+|+.+.|.+..++      .+ +|.|+|+++.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP   77 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence            48999999999999999999999999999997653311   01111223333333333445      56 9999998863


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ..      +       ......+++++|++.|+ +||++||..++..  .                     ..+...|..
T Consensus        78 ~~------~-------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~--~---------------------~~~~~~~~~  121 (285)
T TIGR03649        78 IP------D-------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG--G---------------------PAMGQVHAH  121 (285)
T ss_pred             CC------C-------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC--C---------------------chHHHHHHH
Confidence            21      0       12345689999999997 8999998654311  0                     012233443


Q ss_pred             HHHHHHh-hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRG-AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~-~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +    ++ .+++++++||+++++....       ..+...+.++..+ ..+.++..++|++++|+++++..
T Consensus       122 l----~~~~gi~~tilRp~~f~~~~~~-------~~~~~~~~~~~~~-~~~~g~~~~~~v~~~Dva~~~~~  180 (285)
T TIGR03649       122 L----DSLGGVEYTVLRPTWFMENFSE-------EFHVEAIRKENKI-YSATGDGKIPFVSADDIARVAYR  180 (285)
T ss_pred             H----HhccCCCEEEEeccHHhhhhcc-------cccccccccCCeE-EecCCCCccCcccHHHHHHHHHH
Confidence            3    34 3899999999988864210       0111222233333 34567888999999999999764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08017 oxidoreductase; Provisional

Probab=99.74  E-value=6.1e-17  Score=145.52  Aligned_cols=190  Identities=16%  Similarity=0.079  Sum_probs=126.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-------------cCCCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-------------LLEVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------------~~~~D~  183 (340)
                      ++++||||+|+||.++++.|+++|++|++++|+.+.... .    ...+++.+.+|+.+..             ..++|.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-M----NSLGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-H----HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            589999999999999999999999999999986533211 1    1123566667765431             135799


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHH----HHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNM----LGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~l----l~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      +||++|......    ..++++..+++|+.|+.++    ++.+++.+. ++|++||...+..                ..
T Consensus        78 ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------~~  141 (256)
T PRK08017         78 LFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS----------------TP  141 (256)
T ss_pred             EEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC----------------CC
Confidence            999998643222    2234667899999998776    555566664 8999999643211                11


Q ss_pred             CCChHHHHHHHHHHHHHHHHH---hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCC-CeEEecCCceeEccccH
Q 019470          255 VRSCYDEGKRTAETLTMDYHR---GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~---~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v  330 (340)
                      ....|+.+|...|.+.+.+..   ..++++++++||.+..+..            ..+.... .......+...+.++++
T Consensus       142 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~  209 (256)
T PRK08017        142 GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT------------DNVNQTQSDKPVENPGIAARFTLGP  209 (256)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh------------hcccchhhccchhhhHHHhhcCCCH
Confidence            236799999999998876643   3589999999988755421            1111110 11111122334567999


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|+++++..
T Consensus       210 ~d~a~~~~~  218 (256)
T PRK08017        210 EAVVPKLRH  218 (256)
T ss_pred             HHHHHHHHH
Confidence            999998764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.3e-16  Score=143.43  Aligned_cols=160  Identities=13%  Similarity=0.067  Sum_probs=117.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +|+++||||+|+||.++++.|+++|++|++++|+.....+. ...+  ...++.++.+|+.++.            +.++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEA-KLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            46899999999999999999999999999999875432221 1111  1246778888887641            2368


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      |+||||||......    ..++++..+++|+.++.++++++.+    .+  .+||++||...+..               
T Consensus        80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------------  144 (252)
T PRK07677         80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA---------------  144 (252)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC---------------
Confidence            99999998543211    2234678999999999999998843    22  37999998653211               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~  292 (340)
                       ......|+.+|.+.+.+++.++.+    +|++++.++||.+.+.
T Consensus       145 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        145 -GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence             111256999999999999988765    3899999999999854

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.73  E-value=2.2e-16  Score=140.85  Aligned_cols=161  Identities=18%  Similarity=0.082  Sum_probs=118.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------cCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      ++++||||+|+||.++++.|+++|++|++++|+...........  ....++.++.+|+.+..            +.++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999999998743111111111  12345788889987642            23589


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|||++|......    ..+.++..+++|+.++.++++++    ++.+. +||++||...+...                
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~----------------  146 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ----------------  146 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC----------------
Confidence            9999999653221    22346778899999999986554    44444 89999997654221                


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|.+.+.+++.++.+   .++++++++||.+.++.
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~  189 (245)
T PRK12824        147 FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM  189 (245)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence            11257999999999999888754   48999999999998764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.73  E-value=8.8e-17  Score=163.27  Aligned_cols=165  Identities=20%  Similarity=0.220  Sum_probs=119.6

Q ss_pred             CCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc---ccCCCceEEeeCcccccc--------
Q 019470          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPNFELIRHDVVEPL--------  177 (340)
Q Consensus       109 p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~--------  177 (340)
                      |....+++|++|||||+|+||.+++++|+++|++|++++|+..........   ......+..+.+|+.+..        
T Consensus       407 ~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~  486 (676)
T TIGR02632       407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD  486 (676)
T ss_pred             CCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence            333456789999999999999999999999999999999865432211111   112234667888887642        


Q ss_pred             ----cCCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcC--CeEEEEeCcc-cccCCCCCCC
Q 019470          178 ----LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG--ARFLLTSTSE-VYGDPLQHPQ  242 (340)
Q Consensus       178 ----~~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~--~~~i~~SS~~-v~g~~~~~~~  242 (340)
                          +.++|+||||||.......    .+++...+++|+.+...+++.+    ++.+  .+||++||.. +++.      
T Consensus       487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~------  560 (676)
T TIGR02632       487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG------  560 (676)
T ss_pred             HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC------
Confidence                2369999999997543222    2346778899999887776544    3333  4899999954 3322      


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCcee
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTY  290 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~  290 (340)
                                 .....|+.+|++.+.+++.++.+   .|++++.++|+.|+
T Consensus       561 -----------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~  600 (676)
T TIGR02632       561 -----------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL  600 (676)
T ss_pred             -----------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence                       11268999999999999998876   48999999999987

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.73  E-value=1.4e-16  Score=144.26  Aligned_cols=154  Identities=20%  Similarity=0.203  Sum_probs=118.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++++++||||+|+||.++++.|+++|++|++++++.....        ...+..+.+|+.++.            +.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467789999999999999999999999999999998653321        135677888887642            236


Q ss_pred             CCEEEEcccCCCCC-------------CCcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCCC
Q 019470          181 VDQIYHLACPASPV-------------HYKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~-------------~~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~~  242 (340)
                      +|+||||||.....             ...++++..+++|+.++.++++++...    + .+||++||...+..      
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------  151 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG------  151 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC------
Confidence            89999999964321             122346778999999999999888643    2 37999999754321      


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCcee
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTY  290 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~  290 (340)
                                ......|+.+|.+.+.+++.++.+   .|+++++++||.+-
T Consensus       152 ----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        152 ----------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             ----------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence                      111267999999999999998865   48999999999884

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.73  E-value=2.2e-16  Score=142.63  Aligned_cols=165  Identities=16%  Similarity=0.090  Sum_probs=118.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++++++||||+|+||.++++.|+++|++|+++.|+...........+  ...++.++.+|+.+..            .
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578899999999999999999999999999988875432222111111  1235667788887642            2


Q ss_pred             CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHH----HHHcC--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGL----AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~----a~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++||+||.......    .+++++.+++|+.++.++++.    +++.+  .++|++||...+              
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~--------------  149 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ--------------  149 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc--------------
Confidence            358999999997543322    134667899999887765544    45544  389999996432              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                        .+......|+.+|++.+.+.+.++.+.   |+++++++||.+..+.
T Consensus       150 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~  195 (261)
T PRK08936        150 --IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI  195 (261)
T ss_pred             --CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence              122233679999999999988887654   8999999999998774

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.3e-16  Score=146.73  Aligned_cols=165  Identities=16%  Similarity=0.158  Sum_probs=120.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      ..+++++++||||+|+||.++++.|+++|++|++++|+.+...+ ....+  ....+.++.+|+.+..            
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~-~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDA-VADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35677899999999999999999999999999999997533221 11111  1234677888887642            


Q ss_pred             cCCCCEEEEcccCCCCCCCc------CChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVHYK------FNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~------~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      +.++|+||||||........      .+++..+++|+.|+.++++++.    +.+. ++|++||.+++...         
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  185 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA---------  185 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC---------
Confidence            23689999999975432221      2346789999999888887653    4443 89999997654311         


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            ......|+.+|++.+.+++.++.+   .|+++++++||.|-.+
T Consensus       186 ------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~  228 (293)
T PRK05866        186 ------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP  228 (293)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence                  011267999999999999988765   3899999999988655

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.73  E-value=7.1e-17  Score=146.18  Aligned_cols=164  Identities=13%  Similarity=0.051  Sum_probs=120.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc-----------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----------~~  179 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.....+...+.  ....++..+.+|+.++.           +.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            457889999999999999999999999999999998644322211111  11235778888887641           23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.+...+++++    ++.+ .++|++||...+..              
T Consensus        85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~--------------  150 (263)
T PRK08339         85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP--------------  150 (263)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC--------------
Confidence            5899999999654322    22457888999998877776655    3444 38999999764321              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                        ......|+.+|.+.+.+++.++.+   +|++++++.||.|-.+
T Consensus       151 --~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (263)
T PRK08339        151 --IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD  193 (263)
T ss_pred             --CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence              111257999999999999999876   4899999999999665

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.7e-16  Score=142.73  Aligned_cols=160  Identities=20%  Similarity=0.153  Sum_probs=114.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++|+||||+|+||.+++++|+++|++|++++|+.....+.. ..+   ...++.+|+.++.            ..++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~-~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA-DEV---GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHc---CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            56789999999999999999999999999999998643221111 111   1245667765531            2368


Q ss_pred             CEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCc-ccccCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTS-EVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       182 D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~-~v~g~~~~~~~~E~~~~~  249 (340)
                      |+|||+||......      ..+.++..+++|+.++.++++.+.    +.+ .++|++||. ++++..            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~------------  148 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA------------  148 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC------------
Confidence            99999999753211      112367889999999988777663    333 389999985 455421            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          .....|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       149 ----~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~  191 (255)
T PRK06057        149 ----TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL  191 (255)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence                11256999999988888876543   38999999999998875

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.4e-16  Score=149.10  Aligned_cols=164  Identities=15%  Similarity=0.089  Sum_probs=118.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++++|+||||+|+||.++++.|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            +.
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            356779999999999999999999999999999998654322211110 01235677888887642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.++.++++.+    ++.+ .+||++||...+...             
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~-------------  151 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI-------------  151 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-------------
Confidence            6999999999643222    22346678899988877755544    4444 389999998766321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                         .....|+.+|++.+.+++.++.+     .++++++++||.+.++
T Consensus       152 ---~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~  195 (334)
T PRK07109        152 ---PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP  195 (334)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence               12267999999999998888755     2699999999998765

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1e-16  Score=141.81  Aligned_cols=156  Identities=13%  Similarity=0.061  Sum_probs=117.2

Q ss_pred             EEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc--------cCCCCEEEEcccC
Q 019470          120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL--------LLEVDQIYHLACP  190 (340)
Q Consensus       120 lVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~--------~~~~D~Vih~Ag~  190 (340)
                      +||||+|+||.+++++|+++|++|++++|+...... ....+ ...+++++.+|+.++.        ..++|++||++|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAA-AARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            599999999999999999999999999986432221 11111 1245778888887642        2358999999997


Q ss_pred             CCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          191 ASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       191 ~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      .....    ..++++..+++|+.++.+++++....+. +||++||...+..                ..+.+.|+.+|.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~----------------~~~~~~Y~~sK~a  143 (230)
T PRK07041         80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP----------------SASGVLQGAINAA  143 (230)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC----------------CCcchHHHHHHHH
Confidence            54322    1235778899999999999996655443 8999999876532                1223679999999


Q ss_pred             HHHHHHHHHHhh-CCcEEEEEeCceeCC
Q 019470          266 AETLTMDYHRGA-GVEVRIARIFNTYGP  292 (340)
Q Consensus       266 ~E~~v~~~~~~~-gi~~~ivRp~~i~G~  292 (340)
                      .+.+++.++.+. ++++++++||.+-.+
T Consensus       144 ~~~~~~~la~e~~~irv~~i~pg~~~t~  171 (230)
T PRK07041        144 LEALARGLALELAPVRVNTVSPGLVDTP  171 (230)
T ss_pred             HHHHHHHHHHHhhCceEEEEeecccccH
Confidence            999999988764 689999999988654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.73  E-value=1.2e-16  Score=143.81  Aligned_cols=164  Identities=12%  Similarity=0.046  Sum_probs=121.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      ++++++++||||+|+||.+++++|+++|++|+++++............ ....+..+.+|+.+.            .+.+
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-LGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            467789999999999999999999999999998877532111111111 123567778888663            1236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|++|||||......    ..+++++.+++|+.++.++++++..    .+  .++|++||...+....            
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  153 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI------------  153 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC------------
Confidence            899999999754322    2245788999999999999887743    22  3799999976553211            


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          ....|+.+|++.+.+++.++.+   .|++++.++||.+-.+.
T Consensus       154 ----~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~  195 (253)
T PRK08993        154 ----RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN  195 (253)
T ss_pred             ----CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence                1147999999999999998876   58999999999997763

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=2.8e-16  Score=141.33  Aligned_cols=198  Identities=13%  Similarity=0.040  Sum_probs=134.4

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++|+++||||+  +.||..++++|+++|++|++++|+. ...+... .+....+..+.+|+.++.            +
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3567899999999  7999999999999999999998862 2111111 222235678888987641            2


Q ss_pred             CCCCEEEEcccCCCCC--------CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|++|||||.....        ...++++..+++|+.++..+++++...   +.++|++||.....            
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------  149 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER------------  149 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc------------
Confidence            4589999999975321        122347788999999999988887543   23799999865321            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                          +......|+.+|++.+.+++.++.+   .|+++++|.||.|-.+...... . ...+...+.+..+         .
T Consensus       150 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~-~-~~~~~~~~~~~~p---------~  214 (252)
T PRK06079        150 ----AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK-G-HKDLLKESDSRTV---------D  214 (252)
T ss_pred             ----cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC-C-hHHHHHHHHhcCc---------c
Confidence                1111267999999999999999876   4899999999999765321000 0 1122222222211         1


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+...+|++++++.
T Consensus       215 ~r~~~pedva~~~~~  229 (252)
T PRK06079        215 GVGVTIEEVGNTAAF  229 (252)
T ss_pred             cCCCCHHHHHHHHHH
Confidence            236778999988764

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.73  E-value=7.6e-17  Score=143.61  Aligned_cols=165  Identities=17%  Similarity=0.125  Sum_probs=116.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCccccc--------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEP--------------  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~--------------  176 (340)
                      .+++++++||||+|+||.++++.|+++|++|++++|+.....+....  ......+..+..|+.+.              
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999976432211111  00112334445554321              


Q ss_pred             cc-CCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCC
Q 019470          177 LL-LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       177 ~~-~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      .+ .++|+||||||......     ..+++.+.+++|+.++.++++++.+    .+ .+++++||....           
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-----------  151 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-----------  151 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-----------
Confidence            12 46899999999643211     1234566889999999988887743    33 489999985422           


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh----CCcEEEEEeCceeCCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGPR  293 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~----gi~~~ivRp~~i~G~~  293 (340)
                           .+......|+.+|++.+.+++.++.+.    ++++++++||.|+++.
T Consensus       152 -----~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~  198 (239)
T PRK08703        152 -----TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ  198 (239)
T ss_pred             -----cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence                 111223579999999999999988764    6999999999999985

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.73  E-value=8.7e-17  Score=143.61  Aligned_cols=161  Identities=13%  Similarity=0.092  Sum_probs=118.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccccc---------cCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL---------LLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~---------~~~~D~V  184 (340)
                      ||+++||||+|+||.+++++|+++|++|++++|+.+...+....  .....++.++.+|+.+..         ..++|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            46899999999999999999999999999999976433221111  112346788899987642         1247999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      ||++|......    ..+++.+.+++|+.++.++++++..    .+ .+|+++||......                ...
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~  144 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------------RAS  144 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------------CCC
Confidence            99998654322    1223557889999999999988754    33 38999998642211                011


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ...|+.+|+..+.+++.++.+   .|+++++++||.++++
T Consensus       145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~  184 (243)
T PRK07102        145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP  184 (243)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence            256999999999999988654   4899999999999887

>PRK12742 oxidoreductase; Provisional

Probab=99.72  E-value=1.3e-16  Score=141.81  Aligned_cols=162  Identities=15%  Similarity=0.152  Sum_probs=116.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~Vi  185 (340)
                      +++++|+||||+|+||.++++.|+++|++|+++.+......+.+...   ..++.+..|+.+..        ..++|++|
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE---TGATAVQTDSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH---hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence            46789999999999999999999999999988766432222222111   13456667775531        23589999


Q ss_pred             EcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          186 HLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       186 h~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      ||||......    ..++++..+++|+.++.++++.+...   +.++|++||.....               .+......
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~~~~~  145 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---------------MPVAGMAA  145 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---------------CCCCCCcc
Confidence            9999753222    22357889999999999997666543   24899999964311               11223367


Q ss_pred             HHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          259 YDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      |+.+|++.|.+++.++.+   .|+++++++||.+..+.
T Consensus       146 Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~  183 (237)
T PRK12742        146 YAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA  183 (237)
T ss_pred             hHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence            999999999999988765   48999999999997764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.9e-16  Score=143.16  Aligned_cols=163  Identities=15%  Similarity=0.092  Sum_probs=119.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----------cCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEV  181 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~~  181 (340)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+.........++.++.+|+.+..           +.++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            34677999999999999999999999999999999974432221111111246778888887642           2468


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCccc-ccCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-YGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v-~g~~~~~~~~E~~~~~~~  251 (340)
                      |+|||+||......    ..+++.+.+++|+.|+.++++.+..    .+ .++|++||... ++..              
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------  147 (263)
T PRK09072         82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYP--------------  147 (263)
T ss_pred             CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCC--------------
Confidence            99999999753222    1224567889999999999988754    23 37899988542 2211              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                         ....|+.+|...+.+++.++.+   .+++++++.||.+.++
T Consensus       148 ---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~  188 (263)
T PRK09072        148 ---GYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA  188 (263)
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence               1257999999999999888765   4899999999988664

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.9e-16  Score=147.86  Aligned_cols=165  Identities=13%  Similarity=0.106  Sum_probs=120.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.+...+...+. .....+.++.+|+.++.            +.
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            356789999999999999999999999999999999754332211111 01235667778886641            24


Q ss_pred             CCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||........    +++++.+++|+.++.++++++    ++.+ .+||++||...+..              
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~--------------  149 (330)
T PRK06139         84 RIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA--------------  149 (330)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC--------------
Confidence            689999999975433222    346678999999999987776    3344 38999999764421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~~  293 (340)
                        ......|+.+|++.+.+.+.+..+    .+++++.+.||.+.++.
T Consensus       150 --~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~  194 (330)
T PRK06139        150 --QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG  194 (330)
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence              112267999999999998888765    27999999999998874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.72  E-value=1e-16  Score=144.93  Aligned_cols=163  Identities=21%  Similarity=0.135  Sum_probs=119.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.+...+ +... ....+..+.+|+.+..            +.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE-LEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            3567899999999999999999999999999999986533222 1111 1234667778886531            246


Q ss_pred             CCEEEEcccCCCCC----CCc-----CChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPV----HYK-----FNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~----~~~-----~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +|++|||||.....    ...     +++++.+++|+.++.++++++...    +.++|++||...+..           
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-----------  148 (262)
T TIGR03325        80 IDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-----------  148 (262)
T ss_pred             CCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC-----------
Confidence            89999999964211    111     246788999999999999988543    237888888653311           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~  293 (340)
                           ......|+.+|.+.+.+++.++.+.  .++++.+.||.+..+.
T Consensus       149 -----~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       149 -----NGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence                 1112579999999999999998874  4899999999997763

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=1.9e-16  Score=141.30  Aligned_cols=164  Identities=16%  Similarity=0.119  Sum_probs=119.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++++++||||+|+||.++++.|+++|++|+++ +|+.....+..... .....+.++.+|+.++.            +
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999998 87643322111110 01235778888887642            1


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccc-cCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVY-GDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~-g~~~~~~~~E~~~~  248 (340)
                      .++|+|||++|......    ..+.++..+++|+.++.++++++..    .+. +||++||...+ +..           
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------  150 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----------  150 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----------
Confidence            26999999999753221    1234677899999999988887754    333 79999996543 221           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                            ....|+.+|.+.+.+++.++.+   .|+++++++||.+..+.
T Consensus       151 ------~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~  192 (247)
T PRK05565        151 ------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM  192 (247)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence                  1257999999999998888765   38999999999987654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.3e-16  Score=141.82  Aligned_cols=164  Identities=16%  Similarity=0.071  Sum_probs=119.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|++....+.........++.++.+|+.+..            +.++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3467999999999999999999999999999999875432221111111146778888886542            2369


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---C-CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |+|||++|......    ..+++.+.+.+|+.++.++++++.+.   + .++|++||...+..                .
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------~  147 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF----------------F  147 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC----------------C
Confidence            99999998654322    12235678899999999998887542   2 37999998654321                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|++.+.+++.+..+   .|++++++|||.+.++.
T Consensus       148 ~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~  190 (237)
T PRK07326        148 AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF  190 (237)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence            22357999999999999887644   48999999999987753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.72  E-value=1.7e-16  Score=143.25  Aligned_cols=164  Identities=15%  Similarity=0.074  Sum_probs=116.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------  177 (340)
                      .+++|+++||||+++||.+++++|+++|++|+++.|......+.....+   ...++.++.+|+.++.            
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4677899999999999999999999999999888764332221111111   1246778888887642            


Q ss_pred             cCCCCEEEEcccCCCCC------C----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPV------H----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~------~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~  242 (340)
                      +.++|++|||||.....      .    ..+.+...+++|+.+...+.+.+.    +.+ .+||++||.....       
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------  157 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV-------  157 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc-------
Confidence            24689999999864211      1    112456688889888777666553    333 3899999964321       


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                               +......|+.+|++.+.+++.++.++   |++++++.||.+-.+
T Consensus       158 ---------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~  201 (260)
T PRK08416        158 ---------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTD  201 (260)
T ss_pred             ---------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCh
Confidence                     11112579999999999999998764   899999999988554

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.1e-16  Score=141.93  Aligned_cols=162  Identities=13%  Similarity=0.049  Sum_probs=117.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc------ccccc--CCCceEEeeCcccccc-------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHF--GNPNFELIRHDVVEPL-------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~------~~~~~--~~~~~~~~~~D~~~~~-------  177 (340)
                      ++++++++||||+|+||.++++.|+++|++|++++|+.+.....      ....+  ...++.++.+|+.++.       
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999975432110      00111  1235677888886642       


Q ss_pred             -----cCCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc-----CCeEEEEeCcccccCCCCCCCC
Q 019470          178 -----LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV-----GARFLLTSTSEVYGDPLQHPQK  243 (340)
Q Consensus       178 -----~~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~-----~~~~i~~SS~~v~g~~~~~~~~  243 (340)
                           +.++|+||||||.......    .+++++.+++|+.++.++++++...     +.+++++||......       
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-------  155 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP-------  155 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc-------
Confidence                 2368999999997543222    2346778899999999999998542     247889987532100       


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCc
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFN  288 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~  288 (340)
                             ........|+.+|++.|.+++.++.+.   +++++.+.||.
T Consensus       156 -------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~  196 (273)
T PRK08278        156 -------KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT  196 (273)
T ss_pred             -------cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence                   101233689999999999999998764   89999999984

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=1.9e-16  Score=143.38  Aligned_cols=164  Identities=12%  Similarity=0.029  Sum_probs=122.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.....+...... ...++.++.+|+.++.            +.
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4567899999999999999999999999999999886543322111110 1235778889987642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcc-cccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSE-VYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~-v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||......    ..+++.+.+++|+.++..+++++..    .+ .+||++||.. .++.             
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  153 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR-------------  153 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC-------------
Confidence            5899999999754322    2235677889999999988777643    33 4899999953 3322             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          .....|+.+|.+.+.+++.++++.   |++++.++||.+.++.
T Consensus       154 ----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (265)
T PRK07097        154 ----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ  196 (265)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence                122679999999999999998764   8999999999998874

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.72  E-value=2.7e-17  Score=141.12  Aligned_cols=218  Identities=23%  Similarity=0.265  Sum_probs=166.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc----cccc---ccCCCceEEeeCcccccc-------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE----NVMH---HFGNPNFELIRHDVVEPL-------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~----~~~~---~~~~~~~~~~~~D~~~~~-------~~  179 (340)
                      +..|..||||-||.=|++|++.|+.+||+|.++.|....-..    .+..   ......+.+.-+|+++..       ..
T Consensus        26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            445689999999999999999999999999999887544332    2211   112356788889998852       23


Q ss_pred             CCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC----CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~----~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      +.+-|+|+|+..+.....+-++..-++...|+++++++.+.++    +||...||+..||...+.|..|.     +|+.|
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~-----TPFyP  180 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSET-----TPFYP  180 (376)
T ss_pred             CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccC-----CCCCC
Confidence            6899999999877666556666777889999999999999886    48999999999999999999998     89999


Q ss_pred             CChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHH----HHHHHHhC-CCeEEecCCceeEccccH
Q 019470          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSN----FVAQALRK-EPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~g~~~~~~v~v  330 (340)
                      +++|+.+|..+-.++-.|.+.+++-.|---.++--.|+.   ...|+.+    -+.++.-+ +.-..+|+.+..+||-|.
T Consensus       181 RSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRR---GenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  181 RSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRR---GENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             CChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcc---ccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence            999999999999998888887777666544555445543   2334333    22223223 344557899999999999


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      .|.+++|+.
T Consensus       258 ~dYVEAMW~  266 (376)
T KOG1372|consen  258 GDYVEAMWL  266 (376)
T ss_pred             HHHHHHHHH
Confidence            999999975

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.72  E-value=7.3e-17  Score=146.82  Aligned_cols=156  Identities=14%  Similarity=0.035  Sum_probs=115.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~  183 (340)
                      ||+++||||+|+||.++++.|+++|++|++++|+.....+ +    ....++.+.+|+.+..            ..++|+
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-L----AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H----HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999999999999999999986432211 1    1123566777776531            246899


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      ||||||......    ..++++..+++|+.++.++++++..    ...++|++||...+..                ...
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~  139 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV----------------TPF  139 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC----------------CCC
Confidence            999999653322    2234677899999999999888743    2247999998553211                111


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ...|+.+|.+.+.+++.++.+   .|+++++++||.|..+
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            267999999999999888765   5999999999999765

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.71  E-value=1.7e-16  Score=143.39  Aligned_cols=162  Identities=19%  Similarity=0.134  Sum_probs=118.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++++||||+|+||.+++++|+++|++|++++|+.+.... +...+ ..++.++.+|+.+..            +.++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLAS-LRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999999986433221 11111 234677788876531            2368


Q ss_pred             CEEEEcccCCCCCC-----CcC----ChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-----YKF----NPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-----~~~----~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      |++|||||......     ..+    .+++.+++|+.++..+++++..    .+.++|++||...+...           
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  150 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG-----------  150 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------
Confidence            99999999743211     111    2567789999999998888753    23479999997654211           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~  293 (340)
                           .....|+.+|++.+.+++.++.+.  +++++.+.||.|..+.
T Consensus       151 -----~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        151 -----GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence                 122579999999999999998764  5999999999997653

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.71  E-value=9.1e-16  Score=138.15  Aligned_cols=162  Identities=15%  Similarity=0.145  Sum_probs=114.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCccccccc---ccCCCceEEeeCcccccc-----c------C
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMH---HFGNPNFELIRHDVVEPL-----L------L  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~-----~------~  179 (340)
                      ++++|+||||+|+||.+++++|+++| ++|++++|+.+...+...+   .....++.++.+|+.++.     +      .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            45689999999999999999999995 8999999976542111111   112236778888886532     1      3


Q ss_pred             CCCEEEEcccCCCCCC-CcCC---hhhHHHHHHHHHHH----HHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-YKFN---PVKTIKTNVVGTLN----MLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-~~~~---~~~~~~~Nv~g~~~----ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++||++|...... ...+   ..+.+++|+.++..    +++++++.+. +||++||...+..              
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~--------------  152 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV--------------  152 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC--------------
Confidence            6999999998753321 1112   22468999998876    4556666654 8999999653211              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                        ......|+.||++.+.+.+.+..+   +++++++++||.+..+
T Consensus       153 --~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~  195 (253)
T PRK07904        153 --RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR  195 (253)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence              112256999999999888777544   5899999999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.71  E-value=1e-16  Score=133.09  Aligned_cols=186  Identities=18%  Similarity=0.115  Sum_probs=136.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~~  181 (340)
                      .+.+.++||||+.+||++|++.|.+.|++|.+.+++.....+..........-..+.+|+.++            .+..+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p   91 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP   91 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence            455689999999999999999999999999999987654443322222223445666776553            23358


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc-------CCeEEEEeCc-ccccCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-------GARFLLTSTS-EVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~-------~~~~i~~SS~-~v~g~~~~~~~~E~~~~~  249 (340)
                      ++++||||+..+..    ..++|++.+.+|+.|+..+.+++.+.       +..+|++||+ +-.|+-++          
T Consensus        92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ----------  161 (256)
T KOG1200|consen   92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ----------  161 (256)
T ss_pred             cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc----------
Confidence            99999999876554    34579999999999999998887554       2379999994 33343333          


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                             +.|..+|.....+.+.+++|   .+++++++-||+|-.|..    ...-+..++.++..-|+..+|+
T Consensus       162 -------tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT----~~mp~~v~~ki~~~iPmgr~G~  224 (256)
T KOG1200|consen  162 -------TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMT----EAMPPKVLDKILGMIPMGRLGE  224 (256)
T ss_pred             -------hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhh----hhcCHHHHHHHHccCCccccCC
Confidence                   68999999888877777765   499999999999988752    2233556777777777666555

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.71  E-value=3.3e-16  Score=139.02  Aligned_cols=191  Identities=16%  Similarity=0.124  Sum_probs=130.3

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCCCEE
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      ++|||++|+||.++++.|+++|++|++++|............+  ....+.++.+|+.++.            ..++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5899999999999999999999999999986532211111111  1124678888886642            1357999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCc-ccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTS-EVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~-~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ||++|......    ..+.++..+++|+.++.++++++..    .+. +|+++||. ++++.+                 
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----------------  143 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----------------  143 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------------
Confidence            99999753221    2234678899999999999998865    333 89999995 455432                 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|.+.+.+++.+.++   .|+++++++||.+.++...    .....+...+....+         ...+.+++
T Consensus       144 ~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~----~~~~~~~~~~~~~~~---------~~~~~~~~  210 (239)
T TIGR01830       144 GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD----KLSEKVKKKILSQIP---------LGRFGTPE  210 (239)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh----hcChHHHHHHHhcCC---------cCCCcCHH
Confidence            1257999999999998887765   4899999999988665311    111222222332222         12266789


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |++++++.
T Consensus       211 ~~a~~~~~  218 (239)
T TIGR01830       211 EVANAVAF  218 (239)
T ss_pred             HHHHHHHH
Confidence            99987753

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=5.6e-16  Score=139.87  Aligned_cols=163  Identities=17%  Similarity=0.054  Sum_probs=117.5

Q ss_pred             CCCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCcc--cccccccCCCceEEeeCccccc-----------
Q 019470          112 LKRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEP-----------  176 (340)
Q Consensus       112 ~~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~-----------  176 (340)
                      .++++|+++||||+  +.||.+++++|+++|++|++++|+.....  +.+...+  .....+.+|+.++           
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHH
Confidence            35678899999998  59999999999999999999998643211  1111111  1234677888664           


Q ss_pred             -ccCCCCEEEEcccCCCCC--------CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCC
Q 019470          177 -LLLEVDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       177 -~~~~~D~Vih~Ag~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                       .+.++|++|||||.....        ...+++++.+++|+.++.++++++...   +.++|++||.....         
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~---------  154 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK---------  154 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc---------
Confidence             124689999999964321        122357889999999999998877442   24799999854220         


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                             +......|+.+|++.+.+++.++.+   +|++++.+.||.+-.+
T Consensus       155 -------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~  198 (258)
T PRK07533        155 -------VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR  198 (258)
T ss_pred             -------CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence                   1111257999999999999998875   4899999999998665

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.71  E-value=4.4e-16  Score=138.56  Aligned_cols=161  Identities=19%  Similarity=0.103  Sum_probs=115.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      |++|||||+|+||.+++++|+++|++|+++.|......+......  ...++.++.+|+.++.            ..++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            479999999999999999999999999999883222111111111  1246778888887642            23589


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||+|......    ..+++.+.++.|+.++..+++.+    ++.+. +||++||......                .
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----------------~  144 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG----------------Q  144 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC----------------C
Confidence            9999999654322    22346678899999988865554    44554 8999998643211                0


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|...+.+++.++++   .++++++++||.+.++.
T Consensus       145 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~  187 (242)
T TIGR01829       145 FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM  187 (242)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence            11257999999999998888764   48999999999998875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.9e-16  Score=140.53  Aligned_cols=162  Identities=18%  Similarity=0.193  Sum_probs=119.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------cCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++||||+|+||.+++++|+++|++|++++|+.....+...   .......+.++.+|+.++.            +.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999987543221111   1111346788888887652            346


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCccc-ccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v-~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||.......    .+.+...+++|+.++.++++++.    +.+. +||++||... ++.+             
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  148 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP-------------  148 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC-------------
Confidence            9999999997543321    23356788999999999888774    3343 8999999543 3321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         .+...|+.+|++.+.+++.+..+   .++++++++||++.++.
T Consensus       149 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~  191 (248)
T PRK08251        149 ---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM  191 (248)
T ss_pred             ---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchh
Confidence               11257999999999999888765   37999999999998763

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.71  E-value=3.8e-16  Score=139.80  Aligned_cols=162  Identities=20%  Similarity=0.148  Sum_probs=114.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +|+++||||+|+||..+++.|+++|++|+++.+......+.....+  ...++.++.+|+.+..            +.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999877543322221111111  1235778888886541            2369


Q ss_pred             CEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH-c-------CCeEEEEeCcc-cccCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR-V-------GARFLLTSTSE-VYGDPLQHPQKETYW  247 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~-~-------~~~~i~~SS~~-v~g~~~~~~~~E~~~  247 (340)
                      |+||||||......     ..+++...+.+|+.++.++++++.+ .       +.+||++||.. .++...         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~---------  152 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN---------  152 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC---------
Confidence            99999999753321     1223567799999999888765432 1       12699999964 333211         


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                             ....|+.+|.+.+.+++.++++.   |+++++++||.+..+.
T Consensus       153 -------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~  194 (248)
T PRK06947        153 -------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI  194 (248)
T ss_pred             -------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence                   11469999999999999888764   8999999999998874

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.71  E-value=6.1e-16  Score=140.25  Aligned_cols=159  Identities=14%  Similarity=0.083  Sum_probs=112.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEeeCcccccc----------------c
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL----------------L  178 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~----------------~  178 (340)
                      +++||||+|+||.+++++|+++|++|++++|......+.+...+   ....+..+.+|+.+..                +
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            79999999999999999999999999998765332222221111   1224556778887642                2


Q ss_pred             CCCCEEEEcccCCCCCCC-----c----------CChhhHHHHHHHHHHHHHHHHHHcC-----------CeEEEEeCcc
Q 019470          179 LEVDQIYHLACPASPVHY-----K----------FNPVKTIKTNVVGTLNMLGLAKRVG-----------ARFLLTSTSE  232 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~-----~----------~~~~~~~~~Nv~g~~~ll~~a~~~~-----------~~~i~~SS~~  232 (340)
                      .++|+||||||.......     .          ..+.+.+++|+.++..+++++....           .++++++|..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            369999999996532211     1          1255789999999999988764221           2577777754


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       233 v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ..                .+......|+.+|++.+.+++.++.+   .|+++++|+||.+..+
T Consensus       163 ~~----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       163 TD----------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             cc----------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            22                12223367999999999999998876   5899999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-16  Score=142.15  Aligned_cols=201  Identities=12%  Similarity=0.056  Sum_probs=135.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++++||||+|+||.++++.|+++|++ |++++|+........... .....+.++.+|+.++.            +.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999999999999999999998 999998643322111110 01235667778886532            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+|||++|......    ..+.+...+++|+.++.++++++.+    .+  .++|++||...++..            
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------  151 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ------------  151 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC------------
Confidence            6899999999754322    1223567899999999999888743    22  279999997765421            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCc---cHHHHHHHHHHhCCCeEEecCCce
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDG---RVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                          .....|+.+|...|.+++.++.+.   +++++.++||.++++.......   .....++.......         .
T Consensus       152 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~  218 (260)
T PRK06198        152 ----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------P  218 (260)
T ss_pred             ----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------C
Confidence                112579999999999999887654   6999999999998875210000   00111222211111         1


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+++++|++++++.
T Consensus       219 ~~~~~~~~~~a~~~~~  234 (260)
T PRK06198        219 FGRLLDPDEVARAVAF  234 (260)
T ss_pred             ccCCcCHHHHHHHHHH
Confidence            2346789999998875

>TIGR02415 23BDH acetoin reductases

Probab=99.70  E-value=2.2e-16  Score=141.67  Aligned_cols=159  Identities=23%  Similarity=0.178  Sum_probs=115.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~D~  183 (340)
                      |+++||||+|+||.+++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            +.++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999998643222211111 11235778888887642            235899


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcc-cccCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSE-VYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~  252 (340)
                      ||||||......    ..+++++.+++|+.++..+++++..    .+  .++|++||.. .++.+               
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------  145 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP---------------  145 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC---------------
Confidence            999999743221    2234667899999999888776643    23  3899999854 33321               


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                        ..+.|+.+|++.+.+++.+..+.   ++++++++||.+..+
T Consensus       146 --~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~  186 (254)
T TIGR02415       146 --ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP  186 (254)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence              12679999999999999887663   899999999988665

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06484 short chain dehydrogenase; Validated

Probab=99.70  E-value=5.1e-16  Score=153.93  Aligned_cols=163  Identities=18%  Similarity=0.212  Sum_probs=122.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ...+|++|||||+|+||.+++++|+++|++|++++|+.....+ +.+.. ...+..+.+|+.++.            +..
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKK-LAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3478899999999999999999999999999999986433221 11111 234556778886641            235


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|++|||||......     ..+++++.+++|+.++.++++++...   +.+||++||...+..                
T Consensus       344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  407 (520)
T PRK06484        344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA----------------  407 (520)
T ss_pred             CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC----------------
Confidence            899999999753211     22357789999999999999988653   248999999764321                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      ......|+.+|+..+.+++.++.+.   |++++++.||.|.++.
T Consensus       408 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  451 (520)
T PRK06484        408 LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA  451 (520)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence            1223679999999999999988764   8999999999998764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.3e-16  Score=139.90  Aligned_cols=165  Identities=19%  Similarity=0.107  Sum_probs=120.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++..+.+|+.+..            +.
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999754322111111 01235778888886641            23


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||+|......     ..+++++.+++|+.++..+++++.    +.+. ++|++||...+...            
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~------------  151 (253)
T PRK06172         84 RLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA------------  151 (253)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------
Confidence            5799999999643221     223567789999999987776543    3443 89999997655321            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          .....|+.+|++.+.+++.++.++   |++++++.||.+-.+.
T Consensus       152 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~  194 (253)
T PRK06172        152 ----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM  194 (253)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence                223679999999999999998764   7999999999986653

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=5.2e-16  Score=139.75  Aligned_cols=165  Identities=17%  Similarity=0.131  Sum_probs=120.0

Q ss_pred             CCCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCc--------ccc--ccccc--CCCceEEeeCcccccc-
Q 019470          113 KRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGR--------KEN--VMHHF--GNPNFELIRHDVVEPL-  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~--------~~~--~~~~~--~~~~~~~~~~D~~~~~-  177 (340)
                      ++++++++||||+|  +||.++++.|+++|++|++++|++...        .+.  +...+  ....+.++.+|+.+.. 
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35678999999995  799999999999999999999862211        000  11111  1235788889887642 


Q ss_pred             -----------cCCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCC
Q 019470          178 -----------LLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDP  237 (340)
Q Consensus       178 -----------~~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~  237 (340)
                                 +.++|+|||+||.......    .+++++.+.+|+.++.++++++...    + .+||++||...++. 
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-  160 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP-  160 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC-
Confidence                       2468999999997533221    1246678999999999999988543    2 38999999765532 


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                                     ......|+.+|++.+.+++.++.+   .+++++.++||.+..+.
T Consensus       161 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~  204 (256)
T PRK12748        161 ---------------MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW  204 (256)
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence                           112257999999999999988765   48999999999887653

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=7.6e-16  Score=140.07  Aligned_cols=162  Identities=14%  Similarity=0.061  Sum_probs=117.0

Q ss_pred             CCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCcc--cccccccCCCceEEeeCcccccc------------
Q 019470          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       114 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      +++|++|||||++  +||.+++++|+++|++|++.+|+.....  +.+.....  ....+.+|+.+..            
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g--~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG--SDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC--CceEEeCCCCCHHHHHHHHHHHHHH
Confidence            5678999999997  9999999999999999999988532111  11111111  1235778887642            


Q ss_pred             cCCCCEEEEcccCCCCC--------CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      +..+|++|||||.....        ...++++..+++|+.++.++++++...   +.++|++||.....           
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~-----------  151 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR-----------  151 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc-----------
Confidence            24699999999975321        123457788999999999988876432   24899999865321           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                           +......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+.
T Consensus       152 -----~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~  196 (271)
T PRK06505        152 -----VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA  196 (271)
T ss_pred             -----cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence                 1111257999999999999999876   48999999999997653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.2e-16  Score=139.27  Aligned_cols=164  Identities=14%  Similarity=0.045  Sum_probs=118.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++++|+||||+|+||.++++.|+++|++|++++|+...............++.++.+|+.++.            ..++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4567999999999999999999999999999999975432211111111235678888887542            2357


Q ss_pred             CEEEEcccCCCCCC--CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCccc-ccCCCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEV-YGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       182 D~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v-~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      |.+||++|......  ..++.+..++.|+.+...+++.+...   +.+||++||... ++                +..+
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------~~~~  146 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----------------ASPD  146 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----------------CCCC
Confidence            99999998532211  11345677899999988888877553   347999998643 21                1122


Q ss_pred             CChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      ...|+.+|.+.+.+++.++.+.   +++++++|||+++++.
T Consensus       147 ~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~  187 (238)
T PRK05786        147 QLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF  187 (238)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence            3579999999999998887653   8999999999999874

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.70  E-value=5.6e-16  Score=139.83  Aligned_cols=161  Identities=12%  Similarity=0.071  Sum_probs=112.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      |+++||||+|+||.+++++|+++|++|++++|+.+...+...+......+.++.+|+.++.            +.++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5899999999999999999999999999999875432211111111135677888886641            2469999


Q ss_pred             EEcccCCCCC---CC---cCChhhHHHHHHHHHHHHHHHH----H-HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPV---HY---KFNPVKTIKTNVVGTLNMLGLA----K-RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       185 ih~Ag~~~~~---~~---~~~~~~~~~~Nv~g~~~ll~~a----~-~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |||||.....   ..   .+++.+.+.+|+.++..+...+    . +.+ .+||++||.....                +
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----------------~  144 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----------------P  144 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC----------------C
Confidence            9999964311   11   1235556778887766554433    2 222 3899999976532                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      ......|+.+|++.+.+++.++.++   |++++.+.||.+-.+.
T Consensus       145 ~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~  188 (259)
T PRK08340        145 MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG  188 (259)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence            1223679999999999999998764   7999999999986653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=3.2e-16  Score=140.28  Aligned_cols=164  Identities=17%  Similarity=0.083  Sum_probs=116.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccc--------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVE--------------P  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~--------------~  176 (340)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.........+  .....++.++..|+..              +
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999975432221111  1112245555555531              1


Q ss_pred             ccCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCC
Q 019470          177 LLLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       177 ~~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      .+.++|+|||+||......     ..+.+.+.+++|+.++.++++++.    +.+. +||++||......          
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------  158 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG----------  158 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC----------
Confidence            2346899999998653321     223467889999999999888774    3444 8999999653211          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                            ......|+.+|++.+.+++.++.+.   ++++++++||.+-++
T Consensus       159 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~  201 (247)
T PRK08945        159 ------RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA  201 (247)
T ss_pred             ------CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence                  1112579999999999999887654   799999999988654

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.1e-15  Score=140.10  Aligned_cols=158  Identities=20%  Similarity=0.131  Sum_probs=114.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC--------Cccccccccc--CCCceEEeeCccccc-------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT--------GRKENVMHHF--GNPNFELIRHDVVEP-------  176 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~--------~~~~~~~~~~--~~~~~~~~~~D~~~~-------  176 (340)
                      +++++++||||+++||.+++++|+++|++|+++++...        ...+.....+  ...++.++.+|+.+.       
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            46789999999999999999999999999999987541        1111111111  123566778888763       


Q ss_pred             -----ccCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c---C----CeEEEEeCcccccC
Q 019470          177 -----LLLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V---G----ARFLLTSTSEVYGD  236 (340)
Q Consensus       177 -----~~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~---~----~~~i~~SS~~v~g~  236 (340)
                           .+.++|++|||||......    ..++++..+++|+.++..+++++..    .   +    .+||++||......
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence                 1346899999999754322    2235788999999999998877642    1   1    37999999653211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeC
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIF  287 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~  287 (340)
                                      ......|+.+|++.+.+++.++.+   .|++++.|.||
T Consensus       164 ----------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg  201 (286)
T PRK07791        164 ----------------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA  201 (286)
T ss_pred             ----------------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence                            111257999999999999998876   58999999998

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.69  E-value=6.3e-16  Score=139.83  Aligned_cols=165  Identities=15%  Similarity=0.074  Sum_probs=119.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---ccccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++++++||||+|+||.+++++|+++|++|++++|+.+...+..   .......++..+.+|+.+..            
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            456789999999999999999999999999999999754322211   11111235667788887641            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|++|||||......    ..+++...+++|+.+...+++.+    ++.+ .++|++||...+..            
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  152 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP------------  152 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC------------
Confidence            246899999999753322    12347778899998877776665    3343 38999999764321            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          ......|+.+|++.+.+++.++.+   .|++++.++||.|-.+.
T Consensus       153 ----~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~  196 (265)
T PRK07062        153 ----EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ  196 (265)
T ss_pred             ----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence                111257999999999999888765   48999999999997653

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.69  E-value=4.9e-16  Score=139.27  Aligned_cols=163  Identities=18%  Similarity=0.180  Sum_probs=119.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc---cccccccCCCceEEeeCccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGNPNFELIRHDVVEP------------L  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~D~~~~------------~  177 (340)
                      ++.+|+|+||||+.+||.+++.+|+++|.+++.+.|......   +.+.+.+...++.++.+|+.+.            .
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            567889999999999999999999999998887777544322   2222222223688888998774            3


Q ss_pred             cCCCCEEEEcccCCCCCCCc-----CChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVHYK-----FNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~-----~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|++|||||... ....     .+....+++|+.|+..+.+++    ++.+ .+||.+||...+             
T Consensus        89 fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~-------------  154 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK-------------  154 (282)
T ss_pred             cCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc-------------
Confidence            457999999999876 3322     235568999999988888877    4444 599999997643             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhhCC-c--EE-EEEeCceeCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV-E--VR-IARIFNTYGP  292 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi-~--~~-ivRp~~i~G~  292 (340)
                         .+......|+.||.+.+.+.+.+..|..- .  +. ++-||.|-..
T Consensus       155 ---~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  155 ---MPLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             ---cCCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence               22222358999999999999999887522 1  11 5889887543

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.6e-15  Score=136.82  Aligned_cols=164  Identities=16%  Similarity=0.093  Sum_probs=119.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccccc--------cCCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL--------LLEVD  182 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~--------~~~~D  182 (340)
                      ++++++++||||+|+||.++++.|+++|++|++++|+.....+....  .....++.++.+|+.++.        ..++|
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   83 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDID   83 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999999999999875432221111  111235677888886642        34699


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      ++|||+|......    ..++++..+++|+.+...+++++    ++.+ .++|++||....                .+.
T Consensus        84 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~----------------~~~  147 (259)
T PRK06125         84 ILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE----------------NPD  147 (259)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc----------------CCC
Confidence            9999999653222    22356788999999998888876    3333 379999885421                111


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      .....|+.+|.+.+.+++.++.+   .|++++.+.||.+..+
T Consensus       148 ~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        148 ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence            12257999999999999988764   4899999999998765

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.68  E-value=1.6e-15  Score=134.88  Aligned_cols=158  Identities=18%  Similarity=0.104  Sum_probs=116.5

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCCCEE
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      |+||||+|+||.++++.|+++|++|++++|......+.....+  ...++.++.+|+.+..            ..++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999999875433222222211  1245788888887642            2358999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH-----HcC-CeEEEEeCcc-cccCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~-----~~~-~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |||+|......    ..++++..+++|+.++.++++++.     +.+ .+||++||.. .++.+                
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------------  144 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR----------------  144 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------------
Confidence            99999754322    234577899999999999988762     223 3899999954 44321                


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                       ....|+.+|++.+.+.+.++.+   .|++++.++||.+.++.
T Consensus       145 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  186 (239)
T TIGR01831       145 -GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM  186 (239)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence             1257999999999998888765   48999999999998764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.68  E-value=4.6e-16  Score=138.93  Aligned_cols=157  Identities=15%  Similarity=0.104  Sum_probs=115.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c-----------C
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L-----------L  179 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~-----------~  179 (340)
                      +|+++||||+|+||.+++++|+++|++|++++|+.....   .. ....++.++.+|+.+..     +           .
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~---~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL---AA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh---hh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            468999999999999999999999999999998653211   11 11235777788876531     1           1


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......     ..+.+...+++|+.++..+.+.+.+    .+ .+||++||...+.              
T Consensus        77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--------------  142 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN--------------  142 (243)
T ss_pred             CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC--------------
Confidence            4799999999754321     1234567889999997777666543    33 3899999976542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh--hCCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG--AGVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~--~gi~~~ivRp~~i~G~  292 (340)
                        +......|+.+|...|.+++.++.+  .++++++++||.+-.+
T Consensus       143 --~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        143 --AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence              2223468999999999999988764  5899999999988554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=6.9e-16  Score=142.80  Aligned_cols=159  Identities=20%  Similarity=0.135  Sum_probs=117.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc-----------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----------~~  179 (340)
                      .+++++++||||+|+||.+++++|+++|++|+++++......+.....+  ...++.++.+|+.+..           +.
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            5678899999999999999999999999999999875432222221111  1245778888887631           24


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c----C----CeEEEEeCcccccCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V----G----ARFLLTSTSEVYGDPLQHPQK  243 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~----~----~~~i~~SS~~v~g~~~~~~~~  243 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++..    .    +    .++|++||...+...      
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  162 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP------  162 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC------
Confidence            6899999999765432    2235778899999999999987642    1    1    379999996543111      


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeC
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIF  287 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~  287 (340)
                                .....|+.+|.+.+.+++.++.+   +|++++++.|+
T Consensus       163 ----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        163 ----------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence                      11257999999999999988775   58999999998

>PRK05855 short chain dehydrogenase; Validated

Probab=99.68  E-value=6.6e-16  Score=154.66  Aligned_cols=164  Identities=15%  Similarity=0.058  Sum_probs=122.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ..++++++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            ..
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHG  391 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            456689999999999999999999999999999999754322211110 11236788889997752            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......    ..+++...+++|+.|+.++++++.    +.+  .+||++||...+...            
T Consensus       392 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------  459 (582)
T PRK05855        392 VPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS------------  459 (582)
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC------------
Confidence            5899999999754332    223567889999999999888753    333  489999998766421            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                          .....|+.+|++.+.+++.++.+   .|++++++.||.|-.+
T Consensus       460 ----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        460 ----RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence                22368999999999999988765   4899999999998654

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.6e-15  Score=136.00  Aligned_cols=160  Identities=14%  Similarity=0.125  Sum_probs=112.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----cC---------CC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL---------EV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~---------~~  181 (340)
                      ||+++||||+|+||++|+++|+++|++|++++|......+.+... ...++.++.+|+.+..     +.         +.
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            368999999999999999999999999999998653222222111 1235777888886641     11         11


Q ss_pred             --CEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          182 --DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       182 --D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                        +++||+||...+..     ..+++...+++|+.+...+++.+.    +.+  .+||++||...+              
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~--------------  145 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK--------------  145 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc--------------
Confidence              27899998653321     223466778889988776665553    322  389999996543              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                        .+..+...|+.+|++.+.+++.++.+     .+++++.++||.+-.+
T Consensus       146 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  192 (251)
T PRK06924        146 --NPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN  192 (251)
T ss_pred             --CCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence              22233468999999999999988765     3799999999988654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.67  E-value=2.8e-16  Score=149.05  Aligned_cols=218  Identities=20%  Similarity=0.133  Sum_probs=147.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCccc--ccc--------ccc------CCCceEEeeCccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKE--NVM--------HHF------GNPNFELIRHDVV  174 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~--~~~--------~~~------~~~~~~~~~~D~~  174 (340)
                      .++|+|+|||||||+|.-++++|++.-.   +++.+-|...+...  .+.        +.+      ...++..+.+|+.
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            4678999999999999999999998742   78888886443211  000        000      1245667777776


Q ss_pred             cccc-----------CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCC
Q 019470          175 EPLL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       175 ~~~~-----------~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~  241 (340)
                      ++.+           .++|+|||+||..   .+++..+....+|..|+++++++|++...  -|+++|++.+.-  ....
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtv---rFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~--~~~~  164 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATV---RFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNC--NVGH  164 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeee---ccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheec--cccc
Confidence            6532           4689999999853   45566778889999999999999999975  699999977651  1111


Q ss_pred             CCCCCCC-----------------CCC---------CCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCC
Q 019470          242 QKETYWG-----------------NVN---------PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC  295 (340)
Q Consensus       242 ~~E~~~~-----------------~~~---------~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~  295 (340)
                      +.|....                 +..         --+..+.|.-+|+.+|.++.+.+  .+++++|+||+.|......
T Consensus       165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccC
Confidence            1111100                 000         01235789999999999998764  3899999999999886432


Q ss_pred             CCCccHHHHH------HHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          296 IDDGRVVSNF------VAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       296 ~~~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      + -.+|++++      +-..-+|.--..+.|.+...|+|+||.|+.+++.
T Consensus       243 P-~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia  291 (467)
T KOG1221|consen  243 P-FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIA  291 (467)
T ss_pred             C-CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHH
Confidence            1 12222221      1112223223445688888999999999999874

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.7e-15  Score=136.76  Aligned_cols=172  Identities=18%  Similarity=0.141  Sum_probs=115.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC--CCceEEeeCcccccc-----------cCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPL-----------LLEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~-----------~~~~D  182 (340)
                      +|+++|||+ |+||.++++.|. +|++|++++|+.+...+.. ..+.  ..++.++.+|+.++.           +.++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAA-KTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH-HHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence            357899997 799999999996 8999999999654322211 1111  235677888886641           24699


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCC-----CCCCCCCCCCCC--C-
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPL-----QHPQKETYWGNV--N-  251 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~-----~~~~~E~~~~~~--~-  251 (340)
                      ++|||||...   ...+++..+++|+.++.++++++...   +.++|++||........     +......++.+.  . 
T Consensus        79 ~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (275)
T PRK06940         79 GLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLP  155 (275)
T ss_pred             EEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccc
Confidence            9999999642   23568899999999999999988653   23567777754321110     000000000000  0 


Q ss_pred             ---C---CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 ---P---IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ---~---~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         +   ......|+.||++.+.+++.++.+   .|++++.|.||.+..+.
T Consensus       156 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~  206 (275)
T PRK06940        156 FLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL  206 (275)
T ss_pred             cccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence               0   012367999999999999988765   48999999999997764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=2.2e-15  Score=136.32  Aligned_cols=162  Identities=12%  Similarity=-0.035  Sum_probs=113.2

Q ss_pred             CCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++++||||  +++||.+++++|+++|++|++.+|... ..+...+.. .......+.+|+.++.            +
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            46789999997  679999999999999999998876421 111111111 1112346778887641            2


Q ss_pred             CCCCEEEEcccCCCCC----C-----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPV----H-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~----~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      .++|++|||||.....    .     ..+.++..+++|+.+...+.+++..    .+.++|++||...+.          
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~----------  152 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR----------  152 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc----------
Confidence            4699999999975421    0     1124567788999998888776533    224799999865331          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            +......|+.+|++.+.+++.++.+   +|++++.+.||.|-.+
T Consensus       153 ------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~  196 (261)
T PRK08690        153 ------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL  196 (261)
T ss_pred             ------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence                  1112257999999999999988754   5899999999999665

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.67  E-value=1e-15  Score=142.43  Aligned_cols=165  Identities=14%  Similarity=0.099  Sum_probs=117.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---ccccCCCceEEeeCccccc----------ccC--
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEP----------LLL--  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~----------~~~--  179 (340)
                      .++.++||||+|+||.+++++|+++|++|++++|+.+...+..   ........+..+.+|+.+.          .+.  
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4679999999999999999999999999999999754332211   1111123455566666531          112  


Q ss_pred             CCCEEEEcccCCCCC--C----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPV--H----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~--~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      ++|++|||||.....  .    ..++++..+++|+.|+.++++++.    +.+ .++|++||...+..+.          
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~----------  201 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS----------  201 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC----------
Confidence            466999999975321  1    123456789999999999888764    334 3899999976432100          


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          ......|+.||+..+.+.+.++.+.   |++++++.||.|-.+.
T Consensus       202 ----~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~  245 (320)
T PLN02780        202 ----DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM  245 (320)
T ss_pred             ----CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence                0112689999999999999988764   8999999999997763

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=8.1e-15  Score=132.08  Aligned_cols=165  Identities=15%  Similarity=0.104  Sum_probs=116.4

Q ss_pred             CCCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCc-------cc---cccccc--CCCceEEeeCcccccc-
Q 019470          113 KRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGR-------KE---NVMHHF--GNPNFELIRHDVVEPL-  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~-------~~---~~~~~~--~~~~~~~~~~D~~~~~-  177 (340)
                      ++++++++||||+|  +||.+++++|+++|++|++.++....+       .+   ...+.+  ...++..+.+|+.+.. 
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            35778999999995  899999999999999998876431110       01   111111  1235778888886641 


Q ss_pred             -----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCC
Q 019470          178 -----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDP  237 (340)
Q Consensus       178 -----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~  237 (340)
                                 +.++|++|||||......    ..++++..+++|+.+...+.+++    ++.+ .+||++||.....  
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG--  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC--
Confidence                       235899999999653322    12246678999999988886544    3332 3899999965431  


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                                    +......|+.+|++.+.+++.++.+   ++++++.++||.+-.+.
T Consensus       161 --------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~  205 (256)
T PRK12859        161 --------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW  205 (256)
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence                          1223368999999999999988765   58999999999986653

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=1.3e-15  Score=138.77  Aligned_cols=162  Identities=16%  Similarity=0.068  Sum_probs=117.1

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCC--cccccccccCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTG--RKENVMHHFGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~-----------  177 (340)
                      .+++|+++||||+  ++||.++++.|+++|++|++.+|+...  ..+.+...+.. . ..+.+|+.+..           
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence            3567899999997  799999999999999999999886321  11111111221 2 46778887642           


Q ss_pred             -cCCCCEEEEcccCCCC----C----CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----V----HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~----~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|++|||||....    .    ...++++..+++|+.++..+.+++...   +.++|++||.+...          
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----------  149 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----------  149 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc----------
Confidence             2468999999997431    1    122357789999999999988877542   24899999864221          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            +......|+.+|++.+.+++.++.+   +|++++.+.||.|..+
T Consensus       150 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (274)
T PRK08415        150 ------YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL  193 (274)
T ss_pred             ------CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence                  1111257999999999999999875   4899999999998765

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.66  E-value=4.9e-15  Score=132.73  Aligned_cols=184  Identities=18%  Similarity=0.155  Sum_probs=116.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      .+++++++||||+|+||.+++++|+++|++|++++|+.....+..   ... ....+..|+.+.     .+.++|++|||
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~---~~~-~~~~~~~D~~~~~~~~~~~~~iDilVnn   86 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN---DES-PNEWIKWECGKEESLDKQLASLDVLILN   86 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh---ccC-CCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence            457789999999999999999999999999999998652211111   111 113455666543     45679999999


Q ss_pred             ccCCCCCC-CcCChhhHHHHHHHHHHHHHHHHHHc--------CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          188 ACPASPVH-YKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       188 Ag~~~~~~-~~~~~~~~~~~Nv~g~~~ll~~a~~~--------~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      ||...... ..+++++.+++|+.++.++++++...        +..++..||.....                + .....
T Consensus        87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~----------------~-~~~~~  149 (245)
T PRK12367         87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ----------------P-ALSPS  149 (245)
T ss_pred             CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC----------------C-CCCch
Confidence            99643222 23467889999999999999887431        22344444433221                0 01246


Q ss_pred             HHHHHHHHHHHH---HHHHH---hhCCcEEEEEeCceeCCCCCC---CCccHHHHHHHHHHhCCCeEE
Q 019470          259 YDEGKRTAETLT---MDYHR---GAGVEVRIARIFNTYGPRMCI---DDGRVVSNFVAQALRKEPLTV  317 (340)
Q Consensus       259 Y~~sK~~~E~~v---~~~~~---~~gi~~~ivRp~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~  317 (340)
                      |+.||++.+.+.   +++..   ..++.++.+.||.+..+....   ....+....+..+.+++...+
T Consensus       150 Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~~~~~~~~vA~~i~~~~~~~~~~~~  217 (245)
T PRK12367        150 YEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPIGIMSADFVAKQILDQANLGLYLII  217 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCccCCCCHHHHHHHHHHHHhcCCceEE
Confidence            999999986543   22221   358899999999875442110   112333444555555555333

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=2.4e-15  Score=135.74  Aligned_cols=164  Identities=12%  Similarity=0.006  Sum_probs=117.8

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCc--ccccccccCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGR--KENVMHHFGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~-----------  177 (340)
                      ++++|+++||||+  +.||.+++++|+++|++|++++|+....  .+.+.......++..+.+|+.++.           
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            3567899999997  8999999999999999999988753211  111222222345677888887642           


Q ss_pred             -cCCCCEEEEcccCCCC----CC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|++|||||....    ..    ..+.+...+++|+.+...+++++...   +.++|++||....-          
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------  153 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------  153 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----------
Confidence             2469999999996531    11    12245678899999998888776543   23899999965321          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            +......|+.+|++.+.+++.++.+   +|++++.|.||.+-.+
T Consensus       154 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  197 (257)
T PRK08594        154 ------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL  197 (257)
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence                  1111257999999999999998875   4899999999998665

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=4.9e-15  Score=134.12  Aligned_cols=162  Identities=16%  Similarity=0.034  Sum_probs=114.6

Q ss_pred             CCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||++  .||.+++++|+++|++|++++|+.. ..+...+.. .......+.+|+.++.            +
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-HHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            4678999999985  9999999999999999998887521 111111110 1123456778886641            2


Q ss_pred             CCCCEEEEcccCCCCCC---------CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH---------YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~---------~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      .++|++|||||......         ..+.++..+++|+.+...+.+++...   +.++|++||.+...           
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----------  151 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------  151 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------
Confidence            35899999999643211         12246678899999988888876432   23799999865321           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                           +......|+.+|.+.+.+++.++.+   +|+++++|.||.+-.+
T Consensus       152 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (262)
T PRK07984        152 -----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL  195 (262)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence                 1111257999999999999999876   4899999999998654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=3.3e-15  Score=135.07  Aligned_cols=162  Identities=12%  Similarity=-0.007  Sum_probs=114.7

Q ss_pred             CCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC-CceEEeeCccccc------------cc
Q 019470          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEP------------LL  178 (340)
Q Consensus       114 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~------------~~  178 (340)
                      +++|+++||||++  +||.++++.|+++|++|++.+|+.. ..+........ ....++.+|+.++            .+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999997  8999999999999999999887531 11111111010 1123467888664            13


Q ss_pred             CCCCEEEEcccCCCCC----C----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPV----H----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~----~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|++|||||.....    .    ..++++..+++|+.+...+++++...   +.++|++||.....            
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------  152 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------  152 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------
Confidence            4699999999964311    1    22357789999999999988876432   24899999865321            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                          +......|+.+|++.+.+++.++.+   +|++++++.||.+-.+
T Consensus       153 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  196 (260)
T PRK06603        153 ----VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL  196 (260)
T ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence                1111257999999999999999875   4899999999998665

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=6.2e-15  Score=132.93  Aligned_cols=161  Identities=13%  Similarity=0.074  Sum_probs=115.4

Q ss_pred             CCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCCC-CcccccccccCCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||  ++.||.+++++|+++|++|++++|+.. ...+.+...+. ..+.++.+|+.++.            +
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~   83 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHV   83 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHc
Confidence            46789999999  899999999999999999999987531 11122222222 24667888887642            2


Q ss_pred             CCCCEEEEcccCCCCC-----C---CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPV-----H---YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~-----~---~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|++|||||.....     .   ..+++++.+++|+.++..+++++...   +.++|++|+....+            
T Consensus        84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~------------  151 (256)
T PRK07889         84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA------------  151 (256)
T ss_pred             CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc------------
Confidence            4699999999975321     1   12345668999999999888877532   23788887643211            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                           ......|+.+|++.+.+++.++.+   +|++++.+.||.+-.+
T Consensus       152 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~  194 (256)
T PRK07889        152 -----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTL  194 (256)
T ss_pred             -----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccCh
Confidence                 011256999999999999998876   4899999999999765

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.66  E-value=2.5e-15  Score=136.62  Aligned_cols=161  Identities=17%  Similarity=0.156  Sum_probs=114.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCccccc------------ccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEP------------LLLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~------------~~~~~D  182 (340)
                      |+++||||+|+||.++++.|+++|++|++++|+.+...+...+  ........++.+|+.++            ...++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999999865332211111  11112234456776553            124589


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c--CCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V--GARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~--~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +||||+|......    ..++++..+++|+.++.++++++..    .  +.+||++||...+..                
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~----------------  144 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA----------------  144 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----------------
Confidence            9999999643222    2234678899999999999998742    2  248999999653211                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ......|+.+|++.+.+.+.++.+   .++++++++||.+.++.
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~  188 (272)
T PRK07832        145 LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL  188 (272)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence            112257999999999988877754   58999999999998874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.65  E-value=3.4e-15  Score=134.81  Aligned_cols=163  Identities=13%  Similarity=0.021  Sum_probs=116.3

Q ss_pred             CCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCC-ccccccccc--CCCceEEeeCcccccc-----------
Q 019470          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTG-RKENVMHHF--GNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       114 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~-~~~~~~~~~--~~~~~~~~~~D~~~~~-----------  177 (340)
                      +++|+++||||+  +.||.+++++|+++|++|++..|..+. +.+.....+  ....+..+.+|+.++.           
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            567899999986  899999999999999999888764331 111111111  1123556778886641           


Q ss_pred             -cCCCCEEEEcccCCCC----CC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|++|||||....    ..    ..+++++.+++|+.++..+++++...   +.++|++||.....          
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------  153 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR----------  153 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----------
Confidence             2469999999997531    11    22357789999999999988876432   34899999964321          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                            +......|+.+|++.+.+++.++.+.   |++++.+.||.|-.+
T Consensus       154 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~  197 (258)
T PRK07370        154 ------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL  197 (258)
T ss_pred             ------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence                  11122579999999999999998764   899999999999765

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.2e-15  Score=134.51  Aligned_cols=159  Identities=17%  Similarity=0.110  Sum_probs=117.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cC--CCCEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LL--EVDQIY  185 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~--~~D~Vi  185 (340)
                      |++++||||+|+||++++++|+++|++|++++|+.+... .+    ....++++.+|+.+..        +.  ++|+||
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~-~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA-AL----QALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH-HH----HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            468999999999999999999999999999998643321 11    1123567778876541        22  489999


Q ss_pred             EcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcc-cccCCCCCCCCCCCCCCCCCCC
Q 019470          186 HLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       186 h~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |++|......      ..++++..+++|+.++.++++++...    +.+++++||.. .++...              ..
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  141 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------------GT  141 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--------------CC
Confidence            9999753221      23457889999999999999988642    23789998854 444211              11


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhh-CCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~-gi~~~ivRp~~i~G~~  293 (340)
                      +...|+.+|...+.+++.++.++ +++++.++||.+..+.
T Consensus       142 ~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~  181 (222)
T PRK06953        142 TGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDM  181 (222)
T ss_pred             CccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence            11369999999999999887664 8999999999998764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=8.1e-15  Score=132.49  Aligned_cols=161  Identities=14%  Similarity=-0.029  Sum_probs=113.9

Q ss_pred             CCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCCCC--cccccccccCCCceEEeeCcccccc------------
Q 019470          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTG--RKENVMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       114 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++++||||  ++.||.+++++|+++|++|++++|....  ..+.+.....  ....+.+|+.++.            
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHHH
Confidence            45789999996  6899999999999999999988654211  1111111111  1235677876641            


Q ss_pred             cCCCCEEEEcccCCCCC---------CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPV---------HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~---------~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      +.++|++|||||.....         ...++++..+++|+.++..+++++...   +.++|++||....-          
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~----------  151 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER----------  151 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc----------
Confidence            34699999999975321         112357778999999999998887543   23799999865321          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            +......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+
T Consensus       152 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~  195 (260)
T PRK06997        152 ------VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTL  195 (260)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccc
Confidence                  1111257999999999999999876   4899999999998664

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.7e-15  Score=152.78  Aligned_cols=165  Identities=14%  Similarity=0.082  Sum_probs=122.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.+..            +.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            467889999999999999999999999999999999754322211111 01235778888887642            23


Q ss_pred             CCCEEEEcccCCCCCCC------cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHY------KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~------~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      ++|++|||||.......      .++++..+++|+.++.++++++    ++.+. +||++||.+.+...           
T Consensus       448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  516 (657)
T PRK07201        448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA-----------  516 (657)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-----------
Confidence            69999999996432211      1346788999999998887765    33443 89999998776421           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                           .....|+.+|++.+.+++.++.+   .|+++++++||.|..+.
T Consensus       517 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~  559 (657)
T PRK07201        517 -----PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPM  559 (657)
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccc
Confidence                 11257999999999999988765   48999999999998764

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.64  E-value=6.4e-15  Score=136.87  Aligned_cols=175  Identities=14%  Similarity=0.092  Sum_probs=119.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++++||||+++||.+++++|+++| ++|++++|+.+...+ ....+  ....+.++.+|+.+..            ..+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQ-AAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            5689999999999999999999999 999999987543221 11111  1235677888886541            246


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcC---CeEEEEeCcccccCCC----CCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVG---ARFLLTSTSEVYGDPL----QHPQKE  244 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~---~~~i~~SS~~v~g~~~----~~~~~E  244 (340)
                      +|++|||||...+..     ..+.++..+++|+.++..+++++.    +.+   .+||++||...+....    ..+...
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            999999999743221     223567889999999888866653    332   4999999976543210    000000


Q ss_pred             CC-------C------CCCCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeC
Q 019470          245 TY-------W------GNVNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYG  291 (340)
Q Consensus       245 ~~-------~------~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G  291 (340)
                      .+       +      ....+..+...|+.||++...+.+.++++    .|++++.++||.|..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  225 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD  225 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence            00       0      01123345567999999988888888764    379999999999853

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=1.2e-14  Score=141.56  Aligned_cols=160  Identities=17%  Similarity=0.116  Sum_probs=117.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ..++++++||||+|+||..+++.|+++|++|+++++....  +.+...........+.+|+.+..            ..+
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  284 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRVGGTALALDITAPDAPARIAEHLAERHGG  284 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCC
Confidence            4578899999999999999999999999999999884221  11111111112345667775531            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC-----CeEEEEeCccc-ccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG-----ARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~-----~~~i~~SS~~v-~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..+.++..+++|+.++.++.+++....     .+||++||... ++..             
T Consensus       285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-------------  351 (450)
T PRK08261        285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-------------  351 (450)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------------
Confidence            899999999754332    223577889999999999999987632     38999999653 3321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G  291 (340)
                          ....|+.+|...+.+++.++.+   .+++++++.||.+-.
T Consensus       352 ----~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t  391 (450)
T PRK08261        352 ----GQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET  391 (450)
T ss_pred             ----CChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence                1267999999999999888754   489999999998754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=6.4e-15  Score=131.11  Aligned_cols=161  Identities=14%  Similarity=0.118  Sum_probs=122.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      +.+++.||||||+++||+.++.+++++|.++.+.|.+.....+.....-....+....+|+.+.            ...+
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~  114 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGD  114 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            4577899999999999999999999999999999998777665443322223677888888764            3347


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCccc-ccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v-~g~~~~~~~~E~~~~~~  250 (340)
                      +|++|||||+......    ++..++.+++|+.+.....++.    .+.. .++|.++|+.. .|..             
T Consensus       115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~-------------  181 (300)
T KOG1201|consen  115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA-------------  181 (300)
T ss_pred             ceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc-------------
Confidence            9999999998765542    2346789999999988877665    3333 49999999653 3221             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh------hCCcEEEEEeCcee
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG------AGVEVRIARIFNTY  290 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~------~gi~~~ivRp~~i~  290 (340)
                          ....|+.||.++..+.+.+..|      .|++.+.+.|+++=
T Consensus       182 ----gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~  223 (300)
T KOG1201|consen  182 ----GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN  223 (300)
T ss_pred             ----cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc
Confidence                1257999999999988888754      27999999999774

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=6e-15  Score=134.26  Aligned_cols=161  Identities=14%  Similarity=0.012  Sum_probs=116.2

Q ss_pred             CCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCC--cccccccccCCCceEEeeCcccccc------------
Q 019470          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTG--RKENVMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       114 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      +++|+++||||+  +.||.++++.|+++|++|+++.|+...  ..+.+...+  .....+.+|+.++.            
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHHHh
Confidence            467899999997  899999999999999999988775211  111111111  12456788886641            


Q ss_pred             cCCCCEEEEcccCCCCC----C----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPV----H----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~----~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      +.++|++|||||.....    .    ..++++..+++|+.++..+++++...   +.++|++||.....           
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-----------  154 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-----------  154 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-----------
Confidence            24689999999975321    1    22357889999999999999887653   23899999854321           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                           +......|+.+|++.+.+++.++.+   +|++++++.||.+..+
T Consensus       155 -----~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  198 (272)
T PRK08159        155 -----VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL  198 (272)
T ss_pred             -----CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence                 1111257999999999999999876   4899999999998664

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.63  E-value=7.3e-15  Score=129.76  Aligned_cols=152  Identities=14%  Similarity=0.147  Sum_probs=112.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c----CCCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L----LEVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~----~~~D~Vih~  187 (340)
                      |+++||||+|+||+++++.|+++|++|++++|+.+...+ ..+.   ..+..+.+|+.++.     +    .++|++|||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~-~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~   76 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEV-AAKE---LDVDAIVCDNTDPASLEEARGLFPHHLDTIVNV   76 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHh---ccCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence            479999999999999999999999999999986432211 1111   13456777876542     1    258999999


Q ss_pred             ccCCCC----C--C---CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          188 ACPASP----V--H---YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       188 Ag~~~~----~--~---~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      ||....    .  .   ..+++++.+++|+.++.++++++...   +.++|++||...                    ..
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------------~~  136 (223)
T PRK05884         77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------------PA  136 (223)
T ss_pred             CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------------CC
Confidence            985211    0  0   12457889999999999999988542   248999998540                    01


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ...|+.+|++.+.+++.++.+   +|++++.+.||.+..+
T Consensus       137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~  176 (223)
T PRK05884        137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP  176 (223)
T ss_pred             ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence            157999999999999998875   4899999999998654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.5e-15  Score=129.29  Aligned_cols=161  Identities=17%  Similarity=0.149  Sum_probs=114.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------c--CCCCEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------L--LEVDQIY  185 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~--~~~D~Vi  185 (340)
                      +++++||||+|+||.+++++|+++|++|++++|+.....+ +..   ..++.+..+|+.++.        +  .++|+||
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA-LQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH-HHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            3689999999999999999999999999999997654321 111   124556667775531        1  2589999


Q ss_pred             EcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHHc---C-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          186 HLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV---G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       186 h~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~---~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      ||||......      ..+++...+.+|+.++..+++++...   + ..++++||..  |....           .+...
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~-----------~~~~~  143 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL-----------PDGGE  143 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc-----------CCCCC
Confidence            9999753321      12345677889999999998887543   2 3688888742  22111           11112


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ...|+.+|.+.+.+++.++.+   .+++++.++||.+-.+.
T Consensus       144 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        144 MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence            246999999999999998765   47999999999997764

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.62  E-value=9.9e-15  Score=126.40  Aligned_cols=147  Identities=16%  Similarity=0.196  Sum_probs=107.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc---ccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~D~Vih~Ag~~~~  193 (340)
                      |+++||||+|+||.++++.|+++ ++|++++|+..           ...+|+.+.+..+.   .+.++|++|||||....
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~   68 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF   68 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence            47999999999999999999999 99999988532           01223333222222   23479999999996432


Q ss_pred             CC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          194 VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       194 ~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      ..    ..+++.+.+++|+.++.++++++...   +.+|+++||....                .+......|+.+|++.
T Consensus        69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~----------------~~~~~~~~Y~~sK~a~  132 (199)
T PRK07578         69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD----------------EPIPGGASAATVNGAL  132 (199)
T ss_pred             CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC----------------CCCCCchHHHHHHHHH
Confidence            22    22346778899999999999988653   2379999985532                1112236799999999


Q ss_pred             HHHHHHHHHh--hCCcEEEEEeCceeC
Q 019470          267 ETLTMDYHRG--AGVEVRIARIFNTYG  291 (340)
Q Consensus       267 E~~v~~~~~~--~gi~~~ivRp~~i~G  291 (340)
                      +.+++.++.+  .|++++.+.||.+-.
T Consensus       133 ~~~~~~la~e~~~gi~v~~i~Pg~v~t  159 (199)
T PRK07578        133 EGFVKAAALELPRGIRINVVSPTVLTE  159 (199)
T ss_pred             HHHHHHHHHHccCCeEEEEEcCCcccC
Confidence            9999988875  489999999998844

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.62  E-value=2.7e-14  Score=129.28  Aligned_cols=166  Identities=17%  Similarity=0.127  Sum_probs=123.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc----ccCCCceEEeeCccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH----HFGNPNFELIRHDVVEP------------  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~----~~~~~~~~~~~~D~~~~------------  176 (340)
                      .+++|+++|||++.+||++++++|++.|.+|++.+|+.+...+....    .....++..+.+|+.++            
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            57889999999999999999999999999999999976543322211    11234678888888653            


Q ss_pred             c-cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHH-HHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCC
Q 019470          177 L-LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVG-TLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       177 ~-~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g-~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E  244 (340)
                      . +.++|++|||||......     ..+.+++.+++|+.| ..++..++...    +. .++++||..-+...       
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~-------  157 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG-------  157 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC-------
Confidence            1 356999999999876442     334588999999995 66666666432    23 78888886533211       


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                              ..+...|+.+|.+.+++.+.++.+   +|++++++.||.|..+.
T Consensus       158 --------~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  158 --------PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             --------CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence                    111157999999999999999875   59999999999998874

>PRK06484 short chain dehydrogenase; Validated

Probab=99.61  E-value=1e-14  Score=144.69  Aligned_cols=162  Identities=20%  Similarity=0.233  Sum_probs=119.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      .++++++||||+++||.++++.|+++|++|++++|+.+...+.. ..+ ...+..+.+|+.++.            +.++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERA-DSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            35679999999999999999999999999999998654332221 111 234566778886641            2469


Q ss_pred             CEEEEcccCCCCC------CCcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPV------HYKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       182 D~Vih~Ag~~~~~------~~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      |++|||||...+.      ...++++..+++|+.++..+++++...    +  .++|++||......             
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~-------------  147 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA-------------  147 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC-------------
Confidence            9999999963211      123457889999999999998887542    2  38999999654311             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.+.+++.++.+   .+++++.+.||.|-.+.
T Consensus       148 ---~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        148 ---LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence               111267999999999999998876   48999999999886653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.60  E-value=5.6e-15  Score=133.08  Aligned_cols=159  Identities=13%  Similarity=0.025  Sum_probs=113.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHh----CCCeEEEEeCCCCCcccccccc---cCCCceEEeeCcccccc--------c-C--
Q 019470          118 RIVVTGGAGFVGSHLVDRLIA----RGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL--------L-L--  179 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~----~G~~V~~l~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~--------~-~--  179 (340)
                      .++||||+++||.+++++|++    .|++|++++|+.+...+...+.   .....+.++.+|+.+..        + .  
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999754332211111   11235778888887642        1 0  


Q ss_pred             -----CCCEEEEcccCCCCCC--C-----cCChhhHHHHHHHHHHHHHHHHHH----c-C--CeEEEEeCcccccCCCCC
Q 019470          180 -----EVDQIYHLACPASPVH--Y-----KFNPVKTIKTNVVGTLNMLGLAKR----V-G--ARFLLTSTSEVYGDPLQH  240 (340)
Q Consensus       180 -----~~D~Vih~Ag~~~~~~--~-----~~~~~~~~~~Nv~g~~~ll~~a~~----~-~--~~~i~~SS~~v~g~~~~~  240 (340)
                           +.|+||||||......  .     .+++++.+++|+.++..+++++..    . +  .++|++||...+.     
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~-----  156 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ-----  156 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC-----
Confidence                 1369999999643211  1     234678999999998888776633    2 2  3799999965431     


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                                 +......|+.+|.+.+.+++.++.+   .|++++++.||.|-.+
T Consensus       157 -----------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~  200 (256)
T TIGR01500       157 -----------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD  200 (256)
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence                       1122367999999999999998776   4899999999998654

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.60  E-value=2.4e-14  Score=132.44  Aligned_cols=166  Identities=13%  Similarity=0.062  Sum_probs=115.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc---------cccccccc--CCCceEEeeCcccccc----
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR---------KENVMHHF--GNPNFELIRHDVVEPL----  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~---------~~~~~~~~--~~~~~~~~~~D~~~~~----  177 (340)
                      .+++|+++||||+++||.+++++|+++|++|++++|+....         .+...+.+  ....+..+.+|+.++.    
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            45678999999999999999999999999999999874211         11111111  1224567888887641    


Q ss_pred             --------cCCCCEEEEcc-cCCC-----CCCC---cCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCccc-c
Q 019470          178 --------LLEVDQIYHLA-CPAS-----PVHY---KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEV-Y  234 (340)
Q Consensus       178 --------~~~~D~Vih~A-g~~~-----~~~~---~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v-~  234 (340)
                              +.++|++|||| |...     ....   .+++.+.+++|+.+...+++++..    .+ .+||++||... +
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence                    24699999999 7421     1111   234667889999998888776643    32 48999998542 2


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       235 g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                      ...              +......|+.+|.+.+.+++.++.+.   |++++.|.||.|-.+
T Consensus       165 ~~~--------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        165 NAT--------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             cCc--------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence            110              00112469999999999999888764   899999999988554

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.60  E-value=7.3e-14  Score=124.00  Aligned_cols=157  Identities=17%  Similarity=0.150  Sum_probs=110.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccccccCCCceEEeeCccccc--------ccCCCCEEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------LLLEVDQIYH  186 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~~D~Vih  186 (340)
                      |+++||||+|+||++++++|+++|  ..|...+|.....       ....++.++++|+.+.        .+.++|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            589999999999999999999996  4565555533211       1234667788888654        2357999999


Q ss_pred             cccCCCCCC----------CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          187 LACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       187 ~Ag~~~~~~----------~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      |||......          ..+.+...+++|+.+...+++.+..    .+ .+++++||..  +....           .
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~-----------~  140 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISD-----------N  140 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccccc-----------C
Confidence            999764211          1123557889999998888877754    23 3788888732  11100           1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|+..+.+++.++.+     .+++++.+.||.+..+.
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~  187 (235)
T PRK09009        141 RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTAL  187 (235)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCC
Confidence            1122357999999999999998865     37899999999997764

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.59  E-value=4.6e-14  Score=125.03  Aligned_cols=162  Identities=8%  Similarity=0.009  Sum_probs=113.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCccccc------------ccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      ++++++++||||++.||.+++++|+++|++|++++|+.....+...+. .....+..+.+|+.++            .+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999999999999998754332221111 0122455666776553            234


Q ss_pred             -CCCEEEEcccCCCCCC-C----cCChhhHHHHHHHHHHHHHHHH----HHcC--CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          180 -EVDQIYHLACPASPVH-Y----KFNPVKTIKTNVVGTLNMLGLA----KRVG--ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       180 -~~D~Vih~Ag~~~~~~-~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                       ++|++|||||...... .    .+++.+.+++|+.++..+++.+    ++.+  ..+|++||...+             
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------  148 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------  148 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------
Confidence             6999999998432221 1    1235557778888877665544    3333  389999985422             


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                            .....|+.+|++.+.+.+.++.+   ++++++.|.||.+-.+.
T Consensus       149 ------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        149 ------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence                  01257999999999999998875   48999999999987763

>PRK05599 hypothetical protein; Provisional

Probab=99.58  E-value=3.8e-14  Score=127.01  Aligned_cols=159  Identities=13%  Similarity=0.126  Sum_probs=111.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------cCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      |+++||||+++||.+++++|+ +|++|++++|+.+...+...+.  .....+..+.+|+.+..            ..++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 5999999998754332211111  11224677888887641            23699


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHH----HHHcC--CeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGL----AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~----a~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      ++|||||......    ..++..+.+++|+.+..+++..    .++.+  .++|++||...+-                +
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------~  143 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR----------------A  143 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc----------------C
Confidence            9999999754322    1122445677888887766544    34432  4899999965321                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ......|+.+|++.+.+++.++.+   .|++++.+.||.|..+
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~  186 (246)
T PRK05599        144 RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS  186 (246)
T ss_pred             CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence            112257999999999999998876   4899999999999765

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.57  E-value=1.6e-13  Score=130.72  Aligned_cols=160  Identities=21%  Similarity=0.170  Sum_probs=107.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      ...++|+++||||+|+||++++++|+++|++|++++|+.+...+....  ....+..+..|+.++     .+.++|++||
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLIn  251 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILII  251 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEE
Confidence            345788999999999999999999999999999999865432211111  112355666777654     3567999999


Q ss_pred             cccCCCCCC-CcCChhhHHHHHHHHHHHHHHHHHH----cC----C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          187 LACPASPVH-YKFNPVKTIKTNVVGTLNMLGLAKR----VG----A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       187 ~Ag~~~~~~-~~~~~~~~~~~Nv~g~~~ll~~a~~----~~----~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      |||...... ..+++++.+++|+.|+.++++++..    .+    . .+|++|++..                 .+ ...
T Consensus       252 nAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-----------------~~-~~~  313 (406)
T PRK07424        252 NHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-----------------NP-AFS  313 (406)
T ss_pred             CCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-----------------cC-CCc
Confidence            999643222 2235678999999999999998743    22    1 2455544221                 01 011


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeC
Q 019470          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG  291 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G  291 (340)
                      ..|+.||++.+.+..-...+.++.+..+.||.+-.
T Consensus       314 ~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t  348 (406)
T PRK07424        314 PLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKS  348 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcC
Confidence            46999999999876433333466677777776543

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.57  E-value=8.5e-14  Score=117.06  Aligned_cols=156  Identities=17%  Similarity=0.186  Sum_probs=112.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccc--ccc--CCCceEEeeCcccccc------------cC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVM--HHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~--~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++||||+|+||.+++++|+++|. .|++++|+.........  ..+  ...++.++..|+.++.            ..
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999996 68888886543221110  111  1245677888886531            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      .+|.|||++|......    ..++++..+++|+.++.++++++++.+. +++++||.. .++..                
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~----------------  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP----------------  144 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC----------------
Confidence            4799999999643221    2234677899999999999999987764 899999854 33321                


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCcee
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY  290 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~  290 (340)
                       ....|+.+|...+.+++.+. ..+++++.+.||.+-
T Consensus       145 -~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      145 -GQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             -CchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence             12579999999999996654 468999999988764

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.55  E-value=4.2e-14  Score=120.87  Aligned_cols=213  Identities=21%  Similarity=0.232  Sum_probs=147.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CC-eEEEEeCCCCCcccccccccCCCceEEeeCcccc-----ccc--CCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLL--LEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~--~~~D~Vi  185 (340)
                      +..+|||||+-|.+|..+++.|..+ |- .|+.-|...+..  ...+     ..-++-.|+.+     +..  ..+|-+|
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--~V~~-----~GPyIy~DILD~K~L~eIVVn~RIdWL~  115 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--NVTD-----VGPYIYLDILDQKSLEEIVVNKRIDWLV  115 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--hhcc-----cCCchhhhhhccccHHHhhcccccceee
Confidence            3448999999999999999888776 55 555544432221  1111     11233334333     222  2589999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      |..+..+.+ .+.+..-...+|+.|..|+++.+++++.+++..|+++.+|.......+.    +..-..|.+.||.||.-
T Consensus       116 HfSALLSAv-GE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTP----dltIQRPRTIYGVSKVH  190 (366)
T KOG2774|consen  116 HFSALLSAV-GETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTP----DLTIQRPRTIYGVSKVH  190 (366)
T ss_pred             eHHHHHHHh-cccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCC----CeeeecCceeechhHHH
Confidence            987654322 3445555678999999999999999999999999999998654322111    22556788999999999


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCCCCCC-CCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCI-DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|.+-+.+..++|+++.++|...++...... ...+.....+..+++++.-.++-..+....++|..|+-++++.
T Consensus       191 AEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~  265 (366)
T KOG2774|consen  191 AELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQ  265 (366)
T ss_pred             HHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHH
Confidence            9999999999999999999998877653211 1223334455666666655555566677889999999988764

>PLN00015 protochlorophyllide reductase

Probab=99.55  E-value=8.9e-14  Score=128.83  Aligned_cols=172  Identities=14%  Similarity=0.118  Sum_probs=113.6

Q ss_pred             EEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCCCCEE
Q 019470          120 VVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       120 lVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      +||||+++||.+++++|+++| ++|++++|+.+...+ ....+  ....+.++.+|+.+..            ..++|++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAER-AAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            599999999999999999999 999999986543221 11111  1235677788886642            2358999


Q ss_pred             EEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHH----HHcC---CeEEEEeCcccccCCC--C-CC--------
Q 019470          185 YHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLA----KRVG---ARFLLTSTSEVYGDPL--Q-HP--------  241 (340)
Q Consensus       185 ih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~---~~~i~~SS~~v~g~~~--~-~~--------  241 (340)
                      |||||......     ..+.++..+++|+.|+..+++++    ++.+   .++|++||...+-...  . .+        
T Consensus        80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            99999753211     22356789999999988886655    3343   4899999965431100  0 00        


Q ss_pred             -----CCCC---CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCC
Q 019470          242 -----QKET---YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       242 -----~~E~---~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~  292 (340)
                           ..+.   .+.+.........|+.||++.+.+++.++++    .|++++++.||.|...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  222 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATT  222 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCc
Confidence                 0000   0001112234467999999987777777765    3799999999999643

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.54  E-value=3.8e-14  Score=125.87  Aligned_cols=179  Identities=22%  Similarity=0.235  Sum_probs=116.7

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCCCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPASP  193 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~~~  193 (340)
                      |+|+||||.+|+++++.|++.+++|+++.|+.......   .+....++++.+|..++     ++.++|+||.+.+... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~---~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQ---QLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHH---HHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhh---hhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-
Confidence            79999999999999999999999999999976322211   12224567778887653     6789999998876432 


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                                 ........+++++|+++|+ +|| .||.. .+.. .            ....|....-..|...|+.+ 
T Consensus        77 -----------~~~~~~~~~li~Aa~~agVk~~v-~ss~~~~~~~-~------------~~~~p~~~~~~~k~~ie~~l-  130 (233)
T PF05368_consen   77 -----------PSELEQQKNLIDAAKAAGVKHFV-PSSFGADYDE-S------------SGSEPEIPHFDQKAEIEEYL-  130 (233)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHT-SEEE-ESEESSGTTT-T------------TTSTTHHHHHHHHHHHHHHH-
T ss_pred             -----------hhhhhhhhhHHHhhhccccceEE-EEEecccccc-c------------ccccccchhhhhhhhhhhhh-
Confidence                       1345567889999999998 565 55533 2210 0            11112234556788777776 


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHH--HhCC--CeEEecCCceeEccc-cHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA--LRKE--PLTVYGDGKQTRSFQ-FVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~g~~~~~~v-~v~Dva~a~~~  339 (340)
                         ++.+++++++|||+.+...         ...+...  .++.  .+.++++++....++ ..+|+++++..
T Consensus       131 ---~~~~i~~t~i~~g~f~e~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~  191 (233)
T PF05368_consen  131 ---RESGIPYTIIRPGFFMENL---------LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAA  191 (233)
T ss_dssp             ---HHCTSEBEEEEE-EEHHHH---------HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHH
T ss_pred             ---hhccccceeccccchhhhh---------hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHH
Confidence               4449999999999765431         0111111  1221  357777877667775 99999998764

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=1.6e-13  Score=126.25  Aligned_cols=176  Identities=19%  Similarity=0.145  Sum_probs=127.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc---cccccccCCCceEEeeCccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK---ENVMHHFGNPNFELIRHDVVEP------------L  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~---~~~~~~~~~~~~~~~~~D~~~~------------~  177 (340)
                      +..+++++|||||.+||.+++++|+.+|.+|+...|+.....   +.+........+.+..+|+.+.            .
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            556789999999999999999999999999999999864332   2233334456788899999763            2


Q ss_pred             cCCCCEEEEcccCCCCCC--CcCChhhHHHHHHHHHHHHHHH----HHHcC-CeEEEEeCcccccC--CCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGL----AKRVG-ARFLLTSTSEVYGD--PLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~----a~~~~-~~~i~~SS~~v~g~--~~~~~~~E~~~~  248 (340)
                      ....|++|||||+.....  ..+..+..+.+|..|...+.++    ++... .|+|++||..- +.  ..+....|.   
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~---  187 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEK---  187 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchh---
Confidence            346899999999887655  3345788999999997776655    45555 59999999653 11  111111111   


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~  293 (340)
                       .........|+.||.+......+++++.  |+.++.+.||.+.+..
T Consensus       188 -~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  188 -AKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             -ccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence             0002222359999999999998888764  7999999999998874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.53  E-value=3.5e-13  Score=124.09  Aligned_cols=166  Identities=13%  Similarity=0.091  Sum_probs=111.1

Q ss_pred             CCCCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCCCCccc---ccc-----c---ccCC---CceEEeeCccc-
Q 019470          112 LKRKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKE---NVM-----H---HFGN---PNFELIRHDVV-  174 (340)
Q Consensus       112 ~~~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~---~~~-----~---~~~~---~~~~~~~~D~~-  174 (340)
                      +++++|++|||||  +.+||.++++.|+++|.+|++ .|..+....   ...     +   ....   ....++.+|+. 
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            3578999999999  799999999999999999988 543221100   000     0   0000   01223334431 


Q ss_pred             ------------------------c-------cccCCCCEEEEcccCCC----CC--CCcCChhhHHHHHHHHHHHHHHH
Q 019470          175 ------------------------E-------PLLLEVDQIYHLACPAS----PV--HYKFNPVKTIKTNVVGTLNMLGL  217 (340)
Q Consensus       175 ------------------------~-------~~~~~~D~Vih~Ag~~~----~~--~~~~~~~~~~~~Nv~g~~~ll~~  217 (340)
                                              +       +.+.++|++|||||...    +.  ...+++++.+++|+.++..++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~  163 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH  163 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence                                    0       11246899999997432    11  12346888999999999999887


Q ss_pred             HHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCcee
Q 019470          218 AKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTY  290 (340)
Q Consensus       218 a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~  290 (340)
                      +...   +.++|++||......              .+ .....|+.+|++.+.+.+.++.+    +|++++.|.||.|-
T Consensus       164 ~~p~m~~~G~II~isS~a~~~~--------------~p-~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~  228 (303)
T PLN02730        164 FGPIMNPGGASISLTYIASERI--------------IP-GYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG  228 (303)
T ss_pred             HHHHHhcCCEEEEEechhhcCC--------------CC-CCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence            7543   248999999653211              00 01136999999999999999875    37999999999987


Q ss_pred             CCC
Q 019470          291 GPR  293 (340)
Q Consensus       291 G~~  293 (340)
                      .+.
T Consensus       229 T~~  231 (303)
T PLN02730        229 SRA  231 (303)
T ss_pred             Cch
Confidence            653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.51  E-value=1e-13  Score=116.33  Aligned_cols=144  Identities=17%  Similarity=0.191  Sum_probs=106.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC-CCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF-TGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~-~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      |+++||||++.||.+++++|+++|. .|+++.|+. ......+...+  ...++.++.+|+.++.            ...
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5799999999999999999999955 778888761 11111111111  2368899999987642            236


Q ss_pred             CCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHHHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      +|++|||+|........    +++.+.+++|+.+...+.+++...+ .++|++||....                .+...
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~----------------~~~~~  144 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGV----------------RGSPG  144 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGT----------------SSSTT
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhc----------------cCCCC
Confidence            99999999986643322    3467899999999999999998844 389999996643                12223


Q ss_pred             CChHHHHHHHHHHHHHHHHHh
Q 019470          256 RSCYDEGKRTAETLTMDYHRG  276 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~  276 (340)
                      ...|+.+|++.+.+++.+++|
T Consensus       145 ~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  145 MSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHh
Confidence            368999999999999999876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.50  E-value=6.6e-13  Score=118.95  Aligned_cols=164  Identities=18%  Similarity=0.155  Sum_probs=117.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-cccccccc-CC--CceEEeeCcccc-c-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHF-GN--PNFELIRHDVVE-P-----------  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~-~~--~~~~~~~~D~~~-~-----------  176 (340)
                      ..++++++||||+++||..++++|+++|+.|+++.+..... .+...... ..  ..+.....|+.+ .           
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            35678999999999999999999999999988888765431 11111110 11  245666678775 3           


Q ss_pred             -ccCCCCEEEEcccCCCC---CC--CcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          177 -LLLEVDQIYHLACPASP---VH--YKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       177 -~~~~~D~Vih~Ag~~~~---~~--~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       .+.++|++|||||....   ..  ..+.++..+++|+.+...+.+++...-.  ++|++||.... .....        
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~--------  152 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG--------  152 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--------
Confidence             12359999999997542   11  2245788999999999988886554444  89999997643 21100        


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                             ...|+.||++.+.+.+.++.+   .|++++.+.||.+-.+
T Consensus       153 -------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         153 -------QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             -------cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence                   268999999999999988855   5899999999965433

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.48  E-value=3.3e-14  Score=126.90  Aligned_cols=190  Identities=17%  Similarity=0.155  Sum_probs=130.8

Q ss_pred             cCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------cc-CCCCEEEEc
Q 019470          123 GGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LL-LEVDQIYHL  187 (340)
Q Consensus       123 Gat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~-~~~D~Vih~  187 (340)
                      |++  +.||.+++++|+++|++|++++|+.+.....+.........+++.+|+.++            .+ .++|++|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  999999999999999999999997654322222221112344688998664            24 679999999


Q ss_pred             ccCCCC----CC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          188 ACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       188 Ag~~~~----~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      +|....    ..    ..+++.+.+++|+.+...+++++.+.   +..+|++||.....                +....
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~----------------~~~~~  144 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR----------------PMPGY  144 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS----------------BSTTT
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc----------------cCccc
Confidence            997553    11    12357789999999999999888553   23799999875321                11222


Q ss_pred             ChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD  332 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D  332 (340)
                      ..|+.+|++.+.+++.++.+    +||++++|.||.+..+...  .....+.+...+.+..++.         .+...+|
T Consensus       145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~--~~~~~~~~~~~~~~~~pl~---------r~~~~~e  213 (241)
T PF13561_consen  145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTE--RIPGNEEFLEELKKRIPLG---------RLGTPEE  213 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHH--HHHTHHHHHHHHHHHSTTS---------SHBEHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchh--ccccccchhhhhhhhhccC---------CCcCHHH
Confidence            58999999999999998753    5899999999999765310  0001233444444443332         2567899


Q ss_pred             HHHHHHh
Q 019470          333 LVRLTET  339 (340)
Q Consensus       333 va~a~~~  339 (340)
                      +|++++.
T Consensus       214 vA~~v~f  220 (241)
T PF13561_consen  214 VANAVLF  220 (241)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988764

...

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.48  E-value=2e-12  Score=115.82  Aligned_cols=158  Identities=18%  Similarity=0.149  Sum_probs=118.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc--------------C
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--------------L  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--------------~  179 (340)
                      ...|.|+|||+-.+.|..++++|.++|+.|.+-...+++.+ .+......+++..+..|++++..              .
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae-~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAE-SLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHH-HHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            34557999999999999999999999999998885444432 22222235677888888877531              2


Q ss_pred             CCCEEEEcccCCCC---CCC--cCChhhHHHHHHHHHHHHHHHH----HHcCCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASP---VHY--KFNPVKTIKTNVVGTLNMLGLA----KRVGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~---~~~--~~~~~~~~~~Nv~g~~~ll~~a----~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +.-.||||||+...   ..+  .+++.+.+++|+.|+..+..+.    +++..|+|++||.+  |.              
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~--GR--------------  169 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL--GR--------------  169 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc--cC--------------
Confidence            46799999995532   222  2468899999999988776655    56666999999965  21              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFN  288 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~  288 (340)
                      .+.....+|+.||.+.|.+...+.+|   +|+++.++-||.
T Consensus       170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~  210 (322)
T KOG1610|consen  170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF  210 (322)
T ss_pred             ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence            22233478999999999998888765   599999999993

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.48  E-value=8.6e-13  Score=108.99  Aligned_cols=187  Identities=15%  Similarity=0.141  Sum_probs=125.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~Ag~~  191 (340)
                      |||.|.||||.+|++|++++++|||+|++++|++.+....       ..+.+++.|+.+     ..+.+.|+||..-+..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            5899999999999999999999999999999976543221       345566666655     4567899999866532


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      .+     +.+   .........+++..+.+++ |++.++.++ -|-+++.       ...+.|..|...|...+..+|.+
T Consensus        74 ~~-----~~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~-------rLvD~p~fP~ey~~~A~~~ae~L  138 (211)
T COG2910          74 AS-----DND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT-------RLVDTPDFPAEYKPEALAQAEFL  138 (211)
T ss_pred             CC-----Chh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc-------eeecCCCCchhHHHHHHHHHHHH
Confidence            11     111   1333446778889999887 999998854 3333321       12224555656677888887764


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                       +.+..+.+++|+.+.|...|-|+...++.+.         -+..+....+|   -++|...|.|-+++
T Consensus       139 -~~Lr~~~~l~WTfvSPaa~f~PGerTg~yrl---------ggD~ll~n~~G---~SrIS~aDYAiA~l  194 (211)
T COG2910         139 -DSLRAEKSLDWTFVSPAAFFEPGERTGNYRL---------GGDQLLVNAKG---ESRISYADYAIAVL  194 (211)
T ss_pred             -HHHhhccCcceEEeCcHHhcCCccccCceEe---------ccceEEEcCCC---ceeeeHHHHHHHHH
Confidence             5566666799999999999999754322221         12222222222   36788899988876

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.47  E-value=1.5e-13  Score=117.27  Aligned_cols=157  Identities=22%  Similarity=0.231  Sum_probs=117.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc--cccccccCCCceEEeeCccccc------------cc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEP------------LL  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (340)
                      ...+|++++||+.|+||..+.++|+++|..+.+++.+.+...  ..+........+-++++|+.++            .+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            456889999999999999999999999998888876654433  2333334456788999999774            23


Q ss_pred             CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHH----HH-cC-C--eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA----KR-VG-A--RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a----~~-~~-~--~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ..+|++||+||+..    +.+++..+.+|+.|..+-..++    .+ .| .  -+|++||..-.                
T Consensus        82 g~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL----------------  141 (261)
T KOG4169|consen   82 GTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL----------------  141 (261)
T ss_pred             CceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc----------------
Confidence            45899999999743    5678999999988766655444    22 32 2  69999995432                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH-----hhCCcEEEEEeCce
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHR-----GAGVEVRIARIFNT  289 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~-----~~gi~~~ivRp~~i  289 (340)
                      +|......|+.||+..-.+.++++.     +.|+++..+.||.+
T Consensus       142 ~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t  185 (261)
T KOG4169|consen  142 DPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFT  185 (261)
T ss_pred             CccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcc
Confidence            3333446799999999999888653     45999999999976

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.47  E-value=7.9e-13  Score=111.11  Aligned_cols=160  Identities=19%  Similarity=0.211  Sum_probs=114.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      ..+-+||||||+.+||..++++|.+.|.+|++..|+.....+....   .+.+.-..+|+.+..            ....
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---NPEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---CcchheeeecccchhhHHHHHHHHHhhCCch
Confidence            3456899999999999999999999999999999976544433322   233344444444321            2358


Q ss_pred             CEEEEcccCCCCCCCc------CChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVHYK------FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~------~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +++|||||+.......      ++..+.+++|+.++..+..+...    .+ .-+|.+||.-.+                
T Consensus        80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf----------------  143 (245)
T COG3967          80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF----------------  143 (245)
T ss_pred             heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc----------------
Confidence            9999999987654432      23456788999999988777643    33 479999996654                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH---hhCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHR---GAGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~---~~gi~~~ivRp~~i~G~  292 (340)
                      .|....-.|+.+|++...+...+.+   ..++++.=+-|+.|-.+
T Consensus       144 vPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         144 VPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             CcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            2222234699999999998776654   34889999999988764

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.45  E-value=7.2e-13  Score=113.00  Aligned_cols=209  Identities=18%  Similarity=0.111  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc-cccCCCceEEeeCcccccccCCCC
Q 019470          104 SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-HHFGNPNFELIRHDVVEPLLLEVD  182 (340)
Q Consensus       104 ~~~~~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~D  182 (340)
                      +..+++...+++-...++.|+.||.|.++++.....|+.|-.+.|+..+.....+ ....+...+.+..|.++..+.++.
T Consensus        40 ~snkid~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t  119 (283)
T KOG4288|consen   40 HSNKIDDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPT  119 (283)
T ss_pred             cCCCCcchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCc
Confidence            3445555555655678999999999999999999999999999987543322222 222334556666677777788899


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      .++.+++-.      .+...+.++|-....+-++++++.|+ +|+|+|-.. ||.              .+..+ .+|-.
T Consensus       120 ~v~e~~ggf------gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~--------------~~~i~-rGY~~  177 (283)
T KOG4288|consen  120 FVYEMMGGF------GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL--------------PPLIP-RGYIE  177 (283)
T ss_pred             ccHHHhcCc------cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC--------------CCccc-hhhhc
Confidence            999888743      24566778888888899999999998 899999532 221              22233 48999


Q ss_pred             HHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHH---HHHHHHHHhCC-----CeEEecCCceeEccccHHHH
Q 019470          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVV---SNFVAQALRKE-----PLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      +|+++|..+..   .++++-.++|||+|||.+.-......+   ..-+....+..     .+++.  +.-....+.+++|
T Consensus       178 gKR~AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~V  252 (283)
T KOG4288|consen  178 GKREAEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESV  252 (283)
T ss_pred             cchHHHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHH
Confidence            99999997754   346888999999999985322112222   22223333322     23333  3467789999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |.+.++
T Consensus       253 A~aal~  258 (283)
T KOG4288|consen  253 ALAALK  258 (283)
T ss_pred             HHHHHH
Confidence            998775

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.44  E-value=6.5e-12  Score=113.78  Aligned_cols=178  Identities=21%  Similarity=0.197  Sum_probs=120.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~  191 (340)
                      ++||||||||++|++++++|+++|++|+++.|+.+......      ..+++...|+.++     .+.++|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            47999999999999999999999999999999765443322      5678888888765     457899999987642


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                      . .    +. ...........+..+.+. .+. +++++|......                  .....|..+|...|..+
T Consensus        75 ~-~----~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~------------------~~~~~~~~~~~~~e~~l  129 (275)
T COG0702          75 D-G----SD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA------------------ASPSALARAKAAVEAAL  129 (275)
T ss_pred             c-c----cc-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC------------------CCccHHHHHHHHHHHHH
Confidence            2 1    11 222344444444444444 333 788888655321                  11267999999999998


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHH-HHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFV-AQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .    ..|+.++++|+..+|....        ..+. .....+.+....+.+  ..+++..+|++.++..
T Consensus       130 ~----~sg~~~t~lr~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~  185 (275)
T COG0702         130 R----SSGIPYTTLRRAAFYLGAG--------AAFIEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAA  185 (275)
T ss_pred             H----hcCCCeEEEecCeeeeccc--------hhHHHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHH
Confidence            4    4589999999776655432        2223 233334444444443  7789999999997653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.42  E-value=4.4e-12  Score=116.73  Aligned_cols=165  Identities=13%  Similarity=0.047  Sum_probs=107.7

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCC-------CCccccc--c--cccC--------------CCc
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFF-------TGRKENV--M--HHFG--------------NPN  165 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~-------~~~~~~~--~--~~~~--------------~~~  165 (340)
                      .+++|+++||||+  .+||+++++.|+++|++|++.++.+       .......  .  ....              ...
T Consensus         5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            5678899999995  9999999999999999999976531       0000000  0  0000              001


Q ss_pred             eEEeeCcccc--------------------cccCCCCEEEEcccCCCC--CC----CcCChhhHHHHHHHHHHHHHHHHH
Q 019470          166 FELIRHDVVE--------------------PLLLEVDQIYHLACPASP--VH----YKFNPVKTIKTNVVGTLNMLGLAK  219 (340)
Q Consensus       166 ~~~~~~D~~~--------------------~~~~~~D~Vih~Ag~~~~--~~----~~~~~~~~~~~Nv~g~~~ll~~a~  219 (340)
                      .+-+..|+.+                    ..+.++|++|||||....  ..    ..++++..+++|+.++.++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1111111111                    123469999999985321  11    224578899999999999998875


Q ss_pred             Hc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCC
Q 019470          220 RV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       220 ~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~  292 (340)
                      ..   +.++|++||....-.              .+ .....|+.+|++.+.+++.++.+    +|++++.|.||.+-.+
T Consensus       165 p~m~~~G~ii~iss~~~~~~--------------~p-~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~  229 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRA--------------VP-GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASR  229 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCc--------------CC-CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccCh
Confidence            43   237889988543210              00 00126999999999999998875    3899999999998665

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.42  E-value=5e-13  Score=109.53  Aligned_cols=168  Identities=15%  Similarity=0.100  Sum_probs=119.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..+++|.++|.||||-.|+.+++++++.+.  +|+++.|......+.- +......+|+-..|.......+.|+.+.+-|
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~-k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg   92 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD-KVVAQVEVDFSKLSQLATNEQGPDVLFCALG   92 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc-ceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence            467888999999999999999999999986  9999998753322211 1111122333333334445678999999888


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      .+.....   .+..+++.-+..+.+.++|++.|+ +|+++||.+.-                  ......|-+.|-+.|.
T Consensus        93 TTRgkaG---adgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd------------------~sSrFlY~k~KGEvE~  151 (238)
T KOG4039|consen   93 TTRGKAG---ADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD------------------PSSRFLYMKMKGEVER  151 (238)
T ss_pred             ccccccc---cCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC------------------cccceeeeeccchhhh
Confidence            6544332   344556777888889999999998 89999997742                  1223579999999999


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHH
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSN  304 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~  304 (340)
                      -+.++.-   -++.|+|||.+.|.+.....+.|..+
T Consensus       152 ~v~eL~F---~~~~i~RPG~ll~~R~esr~geflg~  184 (238)
T KOG4039|consen  152 DVIELDF---KHIIILRPGPLLGERTESRQGEFLGN  184 (238)
T ss_pred             hhhhccc---cEEEEecCcceecccccccccchhhh
Confidence            8866642   26899999999998865544545433

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.41  E-value=6.7e-12  Score=117.65  Aligned_cols=162  Identities=21%  Similarity=0.175  Sum_probs=101.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------cc----CCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LL----LEVD  182 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~----~~~D  182 (340)
                      ..+.++|+|+||||.+|+-+++.|+++|+.|+++.|..+.....+...........+..+...+      ..    ....
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~  155 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV  155 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence            4567799999999999999999999999999999998766554433111122222222222221      11    1234


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      +++-++|-.  ...+ +...-..+...|+.|++++|+.+|+ ||+++|+++.-...      ..+|    .......+-.
T Consensus       156 ~v~~~~ggr--p~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~------~~~~----~~~~~~~~~~  222 (411)
T KOG1203|consen  156 IVIKGAGGR--PEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFN------QPPN----ILLLNGLVLK  222 (411)
T ss_pred             eEEecccCC--CCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccC------CCch----hhhhhhhhhH
Confidence            555555421  1111 1122234788999999999999998 89999886532111      1110    0000123446


Q ss_pred             HHHHHHHHHHHHHHhhCCcEEEEEeCceeC
Q 019470          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYG  291 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G  291 (340)
                      +|..+|.++    ++.|+++++|||+...-
T Consensus       223 ~k~~~e~~~----~~Sgl~ytiIR~g~~~~  248 (411)
T KOG1203|consen  223 AKLKAEKFL----QDSGLPYTIIRPGGLEQ  248 (411)
T ss_pred             HHHhHHHHH----HhcCCCcEEEecccccc
Confidence            677777766    46699999999997654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.38  E-value=9.3e-12  Score=106.31  Aligned_cols=166  Identities=16%  Similarity=0.073  Sum_probs=116.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCC-CCCccccccc-ccCCCceEEeeCcccccc--------------
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMH-HFGNPNFELIRHDVVEPL--------------  177 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~-~~~~~~~~~~-~~~~~~~~~~~~D~~~~~--------------  177 (340)
                      .++.|+||||+++||.-|+++|++. |.++++-.+. ++...+.+.. .....++.+++.|+....              
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            3457999999999999999999987 6666555444 4443333322 224678999999986531              


Q ss_pred             cCCCCEEEEcccCCCCCCCcC-----ChhhHHHHHHHHHHHHHHHH----HHc-----C----C---eEEEEeCcccccC
Q 019470          178 LLEVDQIYHLACPASPVHYKF-----NPVKTIKTNVVGTLNMLGLA----KRV-----G----A---RFLLTSTSEVYGD  236 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~~-----~~~~~~~~Nv~g~~~ll~~a----~~~-----~----~---~~i~~SS~~v~g~  236 (340)
                      ..++|.+|+|||+........     .+.+.+++|..|+..+.+++    +++     |    +   .+|++||.+.-  
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--  159 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--  159 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--
Confidence            236899999999865444222     26678999999887777655    221     1    1   69999995521  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .+.           ....+...|..||.+...+.+.+.-+   .++-++.+.||.|-.+.
T Consensus       160 ~~~-----------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM  208 (249)
T KOG1611|consen  160 IGG-----------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM  208 (249)
T ss_pred             cCC-----------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC
Confidence            111           22244478999999999999988754   47889999999987653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.38  E-value=1.6e-12  Score=109.67  Aligned_cols=157  Identities=17%  Similarity=0.131  Sum_probs=113.4

Q ss_pred             CCCeEEEEcC-chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-------------cCC
Q 019470          115 KGLRIVVTGG-AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-------------LLE  180 (340)
Q Consensus       115 ~~~~vlVtGa-tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-------------~~~  180 (340)
                      ..++|||||+ .|+||.+|+++|.++|+.|++..|..+.-....    ...++.....|+.++.             ..+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~----~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLA----IQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHH----HhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            3458888865 689999999999999999999998654332211    1234556666665542             235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      .|++|||||..-...    .....++.+++|+.|..++.++...    .+..+|+++|..+|                -|
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~----------------vp  145 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV----------------VP  145 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE----------------ec
Confidence            899999999643222    1124678999999998888777643    33489999997766                34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G  291 (340)
                      ....+.|..||++...+.+.+.-|   +|++++.+-+|.|-.
T Consensus       146 fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T  187 (289)
T KOG1209|consen  146 FPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT  187 (289)
T ss_pred             cchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence            445578999999999888776533   589999999987654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=7.9e-13  Score=108.15  Aligned_cols=163  Identities=19%  Similarity=0.132  Sum_probs=120.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----cc---CCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL---LEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~---~~~D~V  184 (340)
                      .+.|+.|++||+..+||+.+++.|.+.|..|+++.|++........+.  ..-+.-+.+|+...     .+   ..+|-+
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--p~~I~Pi~~Dls~wea~~~~l~~v~pidgL   81 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--PSLIIPIVGDLSAWEALFKLLVPVFPIDGL   81 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--CcceeeeEecccHHHHHHHhhcccCchhhh
Confidence            457889999999999999999999999999999999654332222211  12256666776542     22   248999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC--eEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~--~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      +||||......    .+++.+..+++|+.+..++.+...+    .++  .++++||.+..                .++.
T Consensus        82 VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~----------------R~~~  145 (245)
T KOG1207|consen   82 VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI----------------RPLD  145 (245)
T ss_pred             hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc----------------cccC
Confidence            99999764332    3346777889999999888887433    233  69999996532                2333


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      -.+.|+.+|++.+.+.+.++.|.   .|+++.+.|..+....
T Consensus       146 nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~M  187 (245)
T KOG1207|consen  146 NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDM  187 (245)
T ss_pred             CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecc
Confidence            34789999999999999998775   6899999999988753

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.33  E-value=5e-12  Score=112.93  Aligned_cols=148  Identities=17%  Similarity=0.167  Sum_probs=104.2

Q ss_pred             HHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----cc----CCCCEEEEcccCCCCCCCcCChhh
Q 019470          132 LVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL----LEVDQIYHLACPASPVHYKFNPVK  202 (340)
Q Consensus       132 l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~----~~~D~Vih~Ag~~~~~~~~~~~~~  202 (340)
                      ++++|+++|++|++++|+.....          ...++.+|+.+.     .+    .++|+||||||...    ..+++.
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~~   66 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVEL   66 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHHH
Confidence            47899999999999999654321          123455666443     12    35899999999642    246788


Q ss_pred             HHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCC-----------CCCCCCCCCCChHHHHHHHHHH
Q 019470          203 TIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY-----------WGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       203 ~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~-----------~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      .+++|+.++..+++++...   +.+||++||...++.....+..|..           |.-..+......|+.+|++.+.
T Consensus        67 ~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~  146 (241)
T PRK12428         67 VARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL  146 (241)
T ss_pred             hhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence            9999999999999998654   2489999998877533221111110           0000233445789999999999


Q ss_pred             HHHHHH-Hh---hCCcEEEEEeCceeCCC
Q 019470          269 LTMDYH-RG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       269 ~v~~~~-~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +.+.++ .+   .|+++++++||.+.++.
T Consensus       147 ~~~~la~~e~~~~girvn~v~PG~v~T~~  175 (241)
T PRK12428        147 WTMRQAQPWFGARGIRVNCVAPGPVFTPI  175 (241)
T ss_pred             HHHHHHHHhhhccCeEEEEeecCCccCcc
Confidence            998888 43   58999999999998874

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.29  E-value=7.2e-11  Score=132.89  Aligned_cols=162  Identities=19%  Similarity=0.122  Sum_probs=120.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcc---------------------------------------
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRK---------------------------------------  154 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~---------------------------------------  154 (340)
                      +++++|||||+|+||..++++|+++ |.+|++++|+.....                                       
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 689999999721000                                       


Q ss_pred             ----ccc---cccc--CCCceEEeeCcccccc-----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHH
Q 019470          155 ----ENV---MHHF--GNPNFELIRHDVVEPL-----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVG  210 (340)
Q Consensus       155 ----~~~---~~~~--~~~~~~~~~~D~~~~~-----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g  210 (340)
                          ...   ...+  ....+.++.+|+.+..           ..++|.||||||......    ..++++..+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                000   0000  1235678889997742           125899999999765433    234578899999999


Q ss_pred             HHHHHHHHHHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh-CCcEEEEEeC
Q 019470          211 TLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-GVEVRIARIF  287 (340)
Q Consensus       211 ~~~ll~~a~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~-gi~~~ivRp~  287 (340)
                      +.++++++..... +||++||.. .+|..+.                 ..|+.+|...+.+.+.+..+. +++++.+.||
T Consensus      2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gq-----------------s~YaaAkaaL~~la~~la~~~~~irV~sI~wG 2218 (2582)
T TIGR02813      2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQ-----------------SDYAMSNDILNKAALQLKALNPSAKVMSFNWG 2218 (2582)
T ss_pred             HHHHHHHHHHhCCCeEEEEechhhcCCCCCc-----------------HHHHHHHHHHHHHHHHHHHHcCCcEEEEEECC
Confidence            9999999987654 799999954 4554322                 579999999999988887765 6899999999


Q ss_pred             ceeCCC
Q 019470          288 NTYGPR  293 (340)
Q Consensus       288 ~i~G~~  293 (340)
                      .+-|..
T Consensus      2219 ~wdtgm 2224 (2582)
T TIGR02813      2219 PWDGGM 2224 (2582)
T ss_pred             eecCCc
Confidence            886643

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.25  E-value=1.2e-10  Score=99.50  Aligned_cols=154  Identities=21%  Similarity=0.252  Sum_probs=103.5

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc--cccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR--KENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~--~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++||||+|.||..+++.|+++|. +|+++.|.....  .......+  ....+.+..+|+.++.            ...
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999986 899999973211  11111111  2457889999997742            135


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeC-cccccCCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS-~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ++.|||+||...+...    .+.....+..-+.|+.++.++...... .||++|| ++++|..++               
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq---------------  146 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ---------------  146 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB---------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch---------------
Confidence            8999999997644332    223566778889999999999988776 7888899 457776554               


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCce
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT  289 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i  289 (340)
                        ..|+..-...+.+.+.... .|.++..|.-+..
T Consensus       147 --~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 --SAYAAANAFLDALARQRRS-RGLPAVSINWGAW  178 (181)
T ss_dssp             --HHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred             --HhHHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence              6899888888888776543 5888888876643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=4.7e-10  Score=100.52  Aligned_cols=160  Identities=23%  Similarity=0.221  Sum_probs=115.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc---ccCCCceEEeeCcccc-----c---cc----CCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPNFELIRHDVVE-----P---LL----LEV  181 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~-----~---~~----~~~  181 (340)
                      ..|+||||+..||..++.++..+|++|.++.|+.+...+...+   ......+.+..+|+.+     .   .+    ..+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            4899999999999999999999999999999975443222111   1122235577777732     1   12    358


Q ss_pred             CEEEEcccCCCCCCCcC----ChhhHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeCcc-cccCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRV----G-A-RFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~----~~~~~~~~Nv~g~~~ll~~a~~~----~-~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~  250 (340)
                      |.+|||||...+...++    ..+..+++|..|+.++++++...    . . +|+.+||.. -++               
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~---------------  178 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG---------------  178 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC---------------
Confidence            99999999876665444    35678999999999998877443    1 1 788888843 222               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        +...+.|..+|.+.-.+...+.+|   +|+.++..-|+.+-.|+
T Consensus       179 --i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG  222 (331)
T KOG1210|consen  179 --IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG  222 (331)
T ss_pred             --cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence              122267999999988887777665   58999999999888875

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.18  E-value=3.7e-11  Score=102.73  Aligned_cols=161  Identities=17%  Similarity=0.075  Sum_probs=111.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-ccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      .++.+||||++.+||..+++.+.+++.+.....+..... .+.+..... .......+|+++..            -.+-
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            345799999999999999999999987544433322211 111111111 23333444444332            1257


Q ss_pred             CEEEEcccCCCCCC-------CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      |.||||||..++..       ..+.|.++++.|+.+...+.+.+...    .  .-++++||.+..              
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav--------------  149 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV--------------  149 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh--------------
Confidence            99999999766543       22358899999999988888777443    2  258999996543              


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh-h-CCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG-A-GVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-~-gi~~~ivRp~~i~G~  292 (340)
                        .|+..+..|+.+|++-+.+.+.++.| . ++++..++||.|=.+
T Consensus       150 --~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~  193 (253)
T KOG1204|consen  150 --RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQ  193 (253)
T ss_pred             --ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccch
Confidence              56666789999999999999998855 3 889999999987544

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.15  E-value=1.5e-10  Score=103.74  Aligned_cols=180  Identities=14%  Similarity=0.095  Sum_probs=124.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc---------cC--CCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL---------LL--EVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~---------~~--~~D~  183 (340)
                      .=.+|||||.+||++.+++|+++|.+|+.+.|+.++...-..+..  ....+.++..|..+..         +.  ++-+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            458999999999999999999999999999998665432222111  1245666666665543         22  4679


Q ss_pred             EEEcccCCC--CCCCc----CChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPAS--PVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       184 Vih~Ag~~~--~~~~~----~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|||+|...  +....    ....+.+.+|+.++..+.+..    .+.+. .++++||....                .|
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~----------------~p  193 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL----------------IP  193 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----------------cc
Confidence            999999865  22211    134567788988877766655    33333 79999996522                34


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccH----HHHHHHHHHhC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRV----VSNFVAQALRK  312 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~----~~~~~~~~~~~  312 (340)
                      ....+.|+.+|...+.+.+.+.+|+   |+.+-.+-|..|-++.......++    -+.|.+..++.
T Consensus       194 ~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~sl~~ps~~tfaksal~t  260 (312)
T KOG1014|consen  194 TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKPSLFVPSPETFAKSALNT  260 (312)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCCCCCcCcCHHHHHHHHHhh
Confidence            4445789999999999888887664   899999999999887544333221    24577777764

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.99  E-value=5e-09  Score=96.88  Aligned_cols=171  Identities=12%  Similarity=0.023  Sum_probs=113.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCccc-ccccccCCCceEEeeC---cccccccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKE-NVMHHFGNPNFELIRH---DVVEPLLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~---D~~~~~~~~~D~Vih~  187 (340)
                      .+|+||.|+|++|.||..++..|+.++  .++..+|+....... .+.+...  ...+...   +...+++.++|+||++
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~gaDvVVit   83 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYADGELWEKALRGADLVLIC   83 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecCCCchHHHhCCCCEEEEC
Confidence            577899999999999999999998665  589999982211111 1111111  2233321   1124678899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCC--CCCCCCCCCCCCCCCCChHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH--PQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~--~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      ||...  ....+..+.+..|+..+.++++++++++. ++|+++|-.+-....-.  ...+.     ..+.+...||.+-.
T Consensus        84 aG~~~--~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~-----sg~p~~~viG~g~L  156 (321)
T PTZ00325         84 AGVPR--KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKA-----GVYDPRKLFGVTTL  156 (321)
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhc-----cCCChhheeechhH
Confidence            99643  22346788999999999999999999997 89999885543211000  00011     33445567777744


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCC
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~  294 (340)
                      -.-++-...++..++....+. ++|+|...
T Consensus       157 Ds~R~r~~la~~l~v~~~~V~-~~VlGeHG  185 (321)
T PTZ00325        157 DVVRARKFVAEALGMNPYDVN-VPVVGGHS  185 (321)
T ss_pred             HHHHHHHHHHHHhCcChhheE-EEEEeecC
Confidence            444555555667788888888 88999764

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.88  E-value=5.9e-10  Score=91.27  Aligned_cols=161  Identities=23%  Similarity=0.285  Sum_probs=114.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~~  181 (340)
                      .++...+||||...+|...++.|.++|..|..+|.-..+- +...+.+. .++.+...|++.+            .+...
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg-~~vakelg-~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-ADVAKELG-GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-hHHHHHhC-CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            3566899999999999999999999999999998743322 22222322 4677888887654            23468


Q ss_pred             CEEEEcccCCCCCC----------CcCChhhHHHHHHHHHHHHHHHHHHc---------CC--eEEEEeCcccccCCCCC
Q 019470          182 DQIYHLACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKRV---------GA--RFLLTSTSEVYGDPLQH  240 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----------~~~~~~~~~~~Nv~g~~~ll~~a~~~---------~~--~~i~~SS~~v~g~~~~~  240 (340)
                      |..+||||+.....          ..++.+..+++|+.||.|+++.....         |-  .+|++.|...|+...  
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~--  162 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT--  162 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc--
Confidence            99999999753221          22356778999999999998865321         22  377777766663321  


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                                    ....|..||.+.-.+..-.++.   .|++++.+.||.+-.|
T Consensus       163 --------------gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tp  203 (260)
T KOG1199|consen  163 --------------GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP  203 (260)
T ss_pred             --------------chhhhhcccCceEeeechhhhhcccCceEEEeecccccCCh
Confidence                          1267999999888876666554   3899999999987555

>PLN00106 malate dehydrogenase

Probab=98.87  E-value=1.4e-08  Score=94.12  Aligned_cols=169  Identities=10%  Similarity=-0.020  Sum_probs=112.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccccccc-CCCceEEe---eCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHF-GNPNFELI---RHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~-~~~~~~~~---~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .||.|+|++|.||..++..|+.++.  ++..+|+.+ ...+ ..+.. ......+.   ..+...+++.++|+|||+||.
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~-a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~   96 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGV-AADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV   96 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCee-EchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence            4899999999999999999987765  899999866 2111 11100 01112222   222234678999999999996


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ...  ...+..+.+..|...+.++.+.+++.+. .+++++|=-+-+..  .....- ......+.+...||.++.-.+++
T Consensus        97 ~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~--~i~t~~-~~~~s~~p~~~viG~~~LDs~Rl  171 (323)
T PLN00106         97 PRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTV--PIAAEV-LKKAGVYDPKKLFGVTTLDVVRA  171 (323)
T ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccH--HHHHHH-HHHcCCCCcceEEEEecchHHHH
Confidence            432  2356788999999999999999999997 67777762221000  000000 00113445567899998888888


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCC
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                      -..+++..++....+. ++|+|..
T Consensus       172 ~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        172 NTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHHhCCChhheE-EEEEEeC
Confidence            8888888898887774 5666765

>PRK06720 hypothetical protein; Provisional

Probab=98.83  E-value=2.9e-08  Score=83.72  Aligned_cols=120  Identities=16%  Similarity=0.074  Sum_probs=74.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCccccc------------ccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      .+++++++||||+++||..+++.|+++|++|++++|+.+...+..... .....+..+.+|+.+.            .+.
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G   92 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS   92 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            457789999999999999999999999999999998654321111111 0123456778887553            134


Q ss_pred             CCCEEEEcccCCCCCC-CcC-ChhhHHHHHHHHHHHHHHHH----HHcC--------CeEEEEeCcc
Q 019470          180 EVDQIYHLACPASPVH-YKF-NPVKTIKTNVVGTLNMLGLA----KRVG--------ARFLLTSTSE  232 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-~~~-~~~~~~~~Nv~g~~~ll~~a----~~~~--------~~~i~~SS~~  232 (340)
                      ++|++|||||...... .++ ..+....+|+.++......+    ++.+        .||..+||.+
T Consensus        93 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         93 RIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             CCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            6999999999754322 111 21122244555444433333    2222        2788888855

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.76  E-value=2.2e-08  Score=85.69  Aligned_cols=195  Identities=15%  Similarity=0.053  Sum_probs=116.2

Q ss_pred             CCCeEEEEcCchHHHHHHHH-----HHHhCC----CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVD-----RLIARG----DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~-----~Ll~~G----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vi  185 (340)
                      +++..++-+++|+|+..|..     ++-+.+    |+|+++.|.+.+..... ..+....+           -..||.++
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw-~el~~~Gi-----------p~sc~a~v   78 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITW-PELDFPGI-----------PISCVAGV   78 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCccccc-chhcCCCC-----------ceehHHHH
Confidence            34467788999999988876     444444    79999999764432211 11111111           01356666


Q ss_pred             EcccCCCCCCCcCChhhHHHHHH-----HHHHHHHHHHHHcCC---eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC
Q 019470          186 HLACPASPVHYKFNPVKTIKTNV-----VGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS  257 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv-----~g~~~ll~~a~~~~~---~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~  257 (340)
                      |.+|.... .....|...+..|+     ..+..+.++..++..   .+|++|..++|-.......+|++     +.+...
T Consensus        79 na~g~n~l-~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~-----~~qgfd  152 (315)
T KOG3019|consen   79 NAVGNNAL-LPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKI-----VHQGFD  152 (315)
T ss_pred             hhhhhhcc-CchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccc-----ccCChH
Confidence            65553211 11113334444444     457888999988873   59999999999776666666763     222212


Q ss_pred             hHHHHHHHHHH--HHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHH--HHHhCCCeEEecCCceeEccccHHHH
Q 019470          258 CYDEGKRTAET--LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVA--QALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       258 ~Y~~sK~~~E~--~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      ..  ++...|.  ..+.  .....+++++|.|.|.|.+.     ..+..++.  ++-.|.+   +|+|+|++.|||++|+
T Consensus       153 ~~--srL~l~WE~aA~~--~~~~~r~~~iR~GvVlG~gG-----Ga~~~M~lpF~~g~GGP---lGsG~Q~fpWIHv~DL  220 (315)
T KOG3019|consen  153 IL--SRLCLEWEGAALK--ANKDVRVALIRIGVVLGKGG-----GALAMMILPFQMGAGGP---LGSGQQWFPWIHVDDL  220 (315)
T ss_pred             HH--HHHHHHHHHHhhc--cCcceeEEEEEEeEEEecCC-----cchhhhhhhhhhccCCc---CCCCCeeeeeeehHHH
Confidence            22  2222222  2111  12258999999999999763     22222222  3334555   4789999999999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      +..+..
T Consensus       221 ~~li~~  226 (315)
T KOG3019|consen  221 VNLIYE  226 (315)
T ss_pred             HHHHHH
Confidence            998764

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.63  E-value=9.5e-08  Score=81.11  Aligned_cols=154  Identities=10%  Similarity=0.027  Sum_probs=94.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      |+++|||||||+|. +++.|+++|++|++++|+................+..+.+|+.++.            ..++|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            47999999998876 9999999999999999864332221111111245777778886642            1246777


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe-----EEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-----FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~-----~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      |+.                  +++.++.++..+|++.|++     |+++=.+.+...                       
T Consensus        80 v~~------------------vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------------  118 (177)
T PRK08309         80 VAW------------------IHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------------  118 (177)
T ss_pred             EEe------------------ccccchhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------------
Confidence            764                  4556788999999999865     887654433100                       


Q ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCC-CCCC-CCccHHHHHHHHHHhCCCeEEecC
Q 019470          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP-RMCI-DDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                         +...+...    . ....+.=|..|++.-. +..+ ++..+-...+..+..+.+..+.|.
T Consensus       119 ---~~~~~~~~----~-~~~~~~~i~lgf~~~~~~~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 ---RIPSEKIG----P-ARCSYRRVILGFVLEDTYSRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             ---hhhhhhhh----h-cCCceEEEEEeEEEeCCccccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence               01111111    1 2556777888886643 2211 334455556666666665555543

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.62  E-value=5.2e-07  Score=83.81  Aligned_cols=163  Identities=13%  Similarity=0.065  Sum_probs=113.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCC--cccccccccC-----CCceEEeeCcccccccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKENVMHHFG-----NPNFELIRHDVVEPLLLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~--~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~  181 (340)
                      .+||.|+|++|.||..++..|+.+|.       ++..+|+....  ......+...     ...+.+..  -..+.+.++
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~~da   79 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD--DPNVAFKDA   79 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec--CcHHHhCCC
Confidence            45899999999999999999998875       68888885432  1111111100     01233332  224678899


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEeCcc---cccCCCCCCCCCCCCCCCCC-CC
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTSTSE---VYGDPLQHPQKETYWGNVNP-IG  254 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~SS~~---v~g~~~~~~~~E~~~~~~~~-~~  254 (340)
                      |+||.+||....  ...+-.+++..|+.-...+.+..++.+ .  .+|.+|--.   +|-..      +     ..+ +.
T Consensus        80 DivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~------k-----~sg~~p  146 (322)
T cd01338          80 DWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM------K-----NAPDIP  146 (322)
T ss_pred             CEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH------H-----HcCCCC
Confidence            999999996432  234566788999999999999998876 3  566666310   11000      0     021 34


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                      +...|+.++...+++...+++..+++...+|..+|||+.
T Consensus       147 ~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         147 PDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             hHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            446899999999999999999999999999999999986

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.59  E-value=5.9e-07  Score=83.65  Aligned_cols=112  Identities=15%  Similarity=0.119  Sum_probs=74.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC-------CeEEEEeCCCCCc-ccccccccCC----CceEEeeCcccccccCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG-------DSVIVVDNFFTGR-KENVMHHFGN----PNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G-------~~V~~l~r~~~~~-~~~~~~~~~~----~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      .+|+||||+|+||.+++..|+.++       .+|+++|+..... .+.....+..    ...++...+...+++.++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            489999999999999999999854       5899999864321 0111001100    000111122234567899999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEeC
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~SS  230 (340)
                      ||+||....  ...+-.+.++.|+.-...+.+..+++. .  .+|.+|.
T Consensus        83 I~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          83 ILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            999996432  234557889999999999998888873 2  5666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.52  E-value=3.1e-06  Score=79.42  Aligned_cols=164  Identities=13%  Similarity=0.106  Sum_probs=97.6

Q ss_pred             CCCCeEEEEcCchHHHHH--HHHHHHhCCCeEEEEeCCCCCccc-----------ccccccC--CCceEEeeCccccc--
Q 019470          114 RKGLRIVVTGGAGFVGSH--LVDRLIARGDSVIVVDNFFTGRKE-----------NVMHHFG--NPNFELIRHDVVEP--  176 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~--l~~~Ll~~G~~V~~l~r~~~~~~~-----------~~~~~~~--~~~~~~~~~D~~~~--  176 (340)
                      ..+|++||||+++.+|.+  +++.| +.|.+|+++++.......           .......  ...+..+.+|+.++  
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            346799999999999999  89999 999999998853221110           1111111  12356778888764  


Q ss_pred             ----------ccCCCCEEEEcccCCCCCC-----------------Cc------------------CCh-hhHHHHHHHH
Q 019470          177 ----------LLLEVDQIYHLACPASPVH-----------------YK------------------FNP-VKTIKTNVVG  210 (340)
Q Consensus       177 ----------~~~~~D~Vih~Ag~~~~~~-----------------~~------------------~~~-~~~~~~Nv~g  210 (340)
                                .+.++|++||++|.....+                 ..                  ... +-...+.++|
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMg  197 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMG  197 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhc
Confidence                      2346999999999653211                 00                  000 1112334455


Q ss_pred             HHHH---HHHHHHc-----CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CC
Q 019470          211 TLNM---LGLAKRV-----GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GV  279 (340)
Q Consensus       211 ~~~l---l~~a~~~-----~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi  279 (340)
                      ....   +++....     |.++|-.|..+   .....|+           -....-|..|+..|..++.++.+.   |+
T Consensus       198 gedw~~Wi~al~~a~lla~g~~~va~TY~G---~~~t~p~-----------Y~~g~mG~AKa~LE~~~r~La~~L~~~gi  263 (398)
T PRK13656        198 GEDWELWIDALDEAGVLAEGAKTVAYSYIG---PELTHPI-----------YWDGTIGKAKKDLDRTALALNEKLAAKGG  263 (398)
T ss_pred             cchHHHHHHHHHhcccccCCcEEEEEecCC---cceeecc-----------cCCchHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            4332   2233333     23566555422   1111111           111357899999999999988754   88


Q ss_pred             cEEEEEeCceeCC
Q 019470          280 EVRIARIFNTYGP  292 (340)
Q Consensus       280 ~~~ivRp~~i~G~  292 (340)
                      +++++-.+.+...
T Consensus       264 ran~i~~g~~~T~  276 (398)
T PRK13656        264 DAYVSVLKAVVTQ  276 (398)
T ss_pred             EEEEEecCcccch
Confidence            9999988876653

>PRK09620 hypothetical protein; Provisional

Probab=98.39  E-value=4.4e-07  Score=80.18  Aligned_cols=74  Identities=22%  Similarity=0.510  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCc----------------hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeC--cccc-
Q 019470          115 KGLRIVVTGGA----------------GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH--DVVE-  175 (340)
Q Consensus       115 ~~~~vlVtGat----------------G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~--D~~~-  175 (340)
                      ++|+||||+|.                ||+|.+|+++|+++|++|+++++..........   ....+..+..  |+.+ 
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~~   78 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQDK   78 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHHH
Confidence            57899999875                999999999999999999999864321111111   0122223333  3332 


Q ss_pred             --ccc--CCCCEEEEcccCC
Q 019470          176 --PLL--LEVDQIYHLACPA  191 (340)
Q Consensus       176 --~~~--~~~D~Vih~Ag~~  191 (340)
                        +.+  .++|+|||+||..
T Consensus        79 l~~~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         79 MKSIITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HHHHhcccCCCEEEECcccc
Confidence              233  3689999999974

>PRK05086 malate dehydrogenase; Provisional

Probab=98.31  E-value=1e-05  Score=74.99  Aligned_cols=110  Identities=17%  Similarity=0.149  Sum_probs=74.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHh---CCCeEEEEeCCCCCcccccccccCC-C-ceEEee--CcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKENVMHHFGN-P-NFELIR--HDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~l~r~~~~~~~~~~~~~~~-~-~~~~~~--~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |+|+|+||+|.+|.+++..|..   .++++.++++++. .. .....+.. . ...+..  .+...+.+.++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~-g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TP-GVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Cc-ceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCC
Confidence            5899999999999999988855   2457888888643 21 11111111 1 122221  2322456788999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS  230 (340)
                      ....  ...+..+.+..|.....++++.+++.+. .+|.+.|
T Consensus        79 ~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         79 VARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            6432  2335677889999999999999999986 5666655

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.28  E-value=2.2e-06  Score=74.76  Aligned_cols=170  Identities=15%  Similarity=0.142  Sum_probs=110.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-----eEEEEeCCCCCcccc---ccccc--CCCceEEeeCccccc---------
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-----SVIVVDNFFTGRKEN---VMHHF--GNPNFELIRHDVVEP---------  176 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-----~V~~l~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~---------  176 (340)
                      .|.++|||++.+||..|+++|++...     .++...|+-++..+.   +....  ....++++..|+.+-         
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            45799999999999999999999865     355556765444322   11111  135788999998652         


Q ss_pred             ---ccCCCCEEEEcccCCCCCC-------------------------------CcCChhhHHHHHHHHHHHHHHHHHHc-
Q 019470          177 ---LLLEVDQIYHLACPASPVH-------------------------------YKFNPVKTIKTNVVGTLNMLGLAKRV-  221 (340)
Q Consensus       177 ---~~~~~D~Vih~Ag~~~~~~-------------------------------~~~~~~~~~~~Nv~g~~~ll~~a~~~-  221 (340)
                         -+...|.|+-|||..-...                               ..+.....+++||.|..-+++..... 
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence               2346899999999642111                               12345578899999988777655332 


Q ss_pred             ---C-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          222 ---G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       222 ---~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                         . .++|++||...-.   ...-.|+    ........+|..||....-+--...+.   .|+.-.++.||.....
T Consensus       163 ~~~~~~~lvwtSS~~a~k---k~lsleD----~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARK---KNLSLED----FQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             hcCCCCeEEEEeeccccc---ccCCHHH----HhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence               2 3899999954211   1111121    133344467999999998876555443   3677778888865543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.26  E-value=1.3e-06  Score=82.25  Aligned_cols=93  Identities=24%  Similarity=0.319  Sum_probs=68.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~Ag  189 (340)
                      ||+|+|.|+ |+||+.++..|+++| .+|++.+|+......-...  ...+++....|..+     +.+.+.|+|||++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~--~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL--IGGKVEALQVDAADVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh--ccccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence            578999998 999999999999999 7999999975443322211  11256666666654     45678899999986


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                      +.              .    ..+++++|.+.|+.++=+|
T Consensus        78 ~~--------------~----~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          78 PF--------------V----DLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             ch--------------h----hHHHHHHHHHhCCCEEEcc
Confidence            42              1    2278999999998887666

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.22  E-value=4.1e-06  Score=74.17  Aligned_cols=69  Identities=22%  Similarity=0.373  Sum_probs=46.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-------cccCCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-------PLLLEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-------~~~~~~D~Vih~Ag~  190 (340)
                      |++=-.+|||+|.+|+++|+++|++|++++|......      ....+++++..+..+       ..+.++|+|||+||.
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAv   91 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAV   91 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCcc
Confidence            4444478999999999999999999999987532111      011234444433322       234579999999997


Q ss_pred             CC
Q 019470          191 AS  192 (340)
Q Consensus       191 ~~  192 (340)
                      ..
T Consensus        92 sd   93 (229)
T PRK06732         92 SD   93 (229)
T ss_pred             CC
Confidence            53

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.21  E-value=1.2e-05  Score=65.64  Aligned_cols=109  Identities=14%  Similarity=0.128  Sum_probs=76.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccc---ccc--cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHH--FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~---~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |||.|+|++|.+|.+++..|+..+.  +++.+|+.+.......   .+.  .......+..  -..+.+.++|+||.+||
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~~~aDivvitag   78 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEALKDADIVVITAG   78 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGGTTESEEEETTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccccccccEEEEecc
Confidence            5899999999999999999999875  8999998744222111   111  1111223333  34456889999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....+-.++++.|..-...+.+..++.+.  .++.+|
T Consensus        79 ~~~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   79 VPR--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             TSS--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             ccc--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            642  23345777889999999999999988874  566665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd00704 MDH Malate dehydrogenase

Probab=98.09  E-value=4.4e-05  Score=71.00  Aligned_cols=108  Identities=14%  Similarity=0.097  Sum_probs=74.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCC--CCcccccccccC-----CCceEEeeCcccccccCCCCE
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFF--TGRKENVMHHFG-----NPNFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~--~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~D~  183 (340)
                      +|.|+||+|.||..++..|+.+|.       +++.+|+..  +.......+...     ...+.+.  +-..+.+.++|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~~~~~~~~~aDi   79 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--TDPEEAFKDVDV   79 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--cChHHHhCCCCE
Confidence            799999999999999999988663       488888865  222111111000     0122222  223467889999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEe
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTS  229 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~S  229 (340)
                      |||+||...  ....+-.+++..|+.-.+.+....++.. .  .+|.+|
T Consensus        80 VVitAG~~~--~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          80 AILVGAFPR--KPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             EEEeCCCCC--CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            999999642  2334667789999999999999998883 4  566665

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.02  E-value=1.4e-05  Score=71.67  Aligned_cols=69  Identities=17%  Similarity=0.321  Sum_probs=45.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcc----ccccc--CCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV----VEPLL--LEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~----~~~~~--~~~D~Vih~Ag~  190 (340)
                      |+|||+||||. |+.|++.|.++|++|++..+...........    ....++.+.+    ....+  .++|+||+.+.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~----g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH----QALTVHTGALDPQELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc----CCceEEECCCCHHHHHHHHHhcCCCEEEEcCCH
Confidence            58999999999 9999999999999999998875533221111    1112222222    11222  359999998753

This enzyme was found to be a monomer by gel filtration.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.97  E-value=7.7e-05  Score=69.43  Aligned_cols=111  Identities=15%  Similarity=0.104  Sum_probs=73.5

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCCc-ccccccccCCCc----eEEeeCcccccccCCCCEEE
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGR-KENVMHHFGNPN----FELIRHDVVEPLLLEVDQIY  185 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~~-~~~~~~~~~~~~----~~~~~~D~~~~~~~~~D~Vi  185 (340)
                      +|.|+|++|.+|..++..|+.+|.       +++.+|+.+... .+.....+....    ..++..+-..+.+.++|+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            589999999999999999988553       588898854431 111111111100    01111112246788999999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEeC
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~SS  230 (340)
                      ++||....  ...+..+.+..|+.-...+.+..++.. .  .+|.+|-
T Consensus        81 itAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        81 LVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             EcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            99996432  234578899999999999999998873 4  5666663

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.94  E-value=1.3e-05  Score=69.11  Aligned_cols=76  Identities=18%  Similarity=0.222  Sum_probs=50.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC-CCceEEeeCccc-----ccccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVV-----EPLLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~D~Vih  186 (340)
                      +.++++++|+||+|.+|+.+++.|++.|++|++++|+.+...+ +...+. .....+...|..     ...+.++|+||+
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQK-AADSLRARFGEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            4567899999999999999999999999999999986432221 111111 111222222322     245678999998


Q ss_pred             ccc
Q 019470          187 LAC  189 (340)
Q Consensus       187 ~Ag  189 (340)
                      +..
T Consensus       104 at~  106 (194)
T cd01078         104 AGA  106 (194)
T ss_pred             CCC
Confidence            654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.93  E-value=0.00019  Score=66.57  Aligned_cols=111  Identities=12%  Similarity=0.062  Sum_probs=74.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCC--CCcccccc---ccc--CCCceEEeeCcccccccCCCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFF--TGRKENVM---HHF--GNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~--~~~~~~~~---~~~--~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      |+|.|+|++|.+|..++..|+..|.  +|+++++..  +.......   +.+  .....++...+. ...+.++|+||-+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence            5899999999999999999999987  599999843  21111111   110  011123332211 2358899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      +|...  ....+-.+.+..|+.-...+++...+...  ++|.+++
T Consensus        80 ag~p~--~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          80 AGVPR--KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             cCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            98532  22233467788999999999998887753  6777776

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.91  E-value=3.6e-05  Score=75.09  Aligned_cols=77  Identities=23%  Similarity=0.289  Sum_probs=57.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ++++|+|+|+|+++ +|..+++.|+++|++|++.++......+.....+...+++++..|..+....++|+||+++|.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~   78 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV   78 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence            35678999999877 999999999999999999998642221111112222356777788777666789999999875

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.88  E-value=0.00024  Score=65.59  Aligned_cols=109  Identities=14%  Similarity=0.065  Sum_probs=76.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc--cccccCCCceEEee--C-cccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN--VMHHFGNPNFELIR--H-DVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~--~-D~~~~~~~~~D~Vih~Ag  189 (340)
                      |||.|+|++|.+|.+++..|+.+|.  ++..+|++ ....+.  +.+..  ....+..  . |...+.+.++|+||-+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g~alDL~~~~--~~~~i~~~~~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPGVAADLSHIN--TPAKVTGYLGPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccceeehHhHhCC--CcceEEEecCCCchHHhcCCCCEEEEeCC
Confidence            4899999999999999999998884  88999886 211111  11111  1223332  2 223467889999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ...  ....+-.+++..|..-...+.+..++.+.  .+|.+|-
T Consensus        78 ~~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          78 VPR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            642  23345677889999999999999988874  6776664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.86  E-value=2.5e-05  Score=74.63  Aligned_cols=74  Identities=22%  Similarity=0.245  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcC----------------chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccc--
Q 019470          113 KRKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV--  174 (340)
Q Consensus       113 ~~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~--  174 (340)
                      ++++++|+||||                +|.+|.+++++|.++|++|+++++.....   .  ......+++...+..  
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~---~--~~~~~~~dv~~~~~~~~  259 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP---T--PAGVKRIDVESAQEMLD  259 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc---C--CCCcEEEccCCHHHHHH
Confidence            468899999999                89999999999999999999998754211   0  000011222221111  


Q ss_pred             --ccccCCCCEEEEcccCC
Q 019470          175 --EPLLLEVDQIYHLACPA  191 (340)
Q Consensus       175 --~~~~~~~D~Vih~Ag~~  191 (340)
                        ...+.++|++||+||+.
T Consensus       260 ~v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        260 AVLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHhcCCCCEEEEccccc
Confidence              12345699999999975

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.85  E-value=3.8e-05  Score=73.50  Aligned_cols=91  Identities=27%  Similarity=0.296  Sum_probs=61.9

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~  191 (340)
                      |+|.|+ |++|+.+++.|++++.  +|++.+|+......... .+...+++....|..+.     .+.++|+|||++++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAE-KLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHh-hccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 9999999999999974  89999997544332222 12456888888888664     467899999999852


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                                        ....++++|.+.|+++|-+|
T Consensus        79 ------------------~~~~v~~~~i~~g~~yvD~~   98 (386)
T PF03435_consen   79 ------------------FGEPVARACIEAGVHYVDTS   98 (386)
T ss_dssp             ------------------GHHHHHHHHHHHT-EEEESS
T ss_pred             ------------------hhHHHHHHHHHhCCCeeccc
Confidence                              12367888888888777643

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.83  E-value=2e-05  Score=73.40  Aligned_cols=73  Identities=21%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-C-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-G-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++++|+||||+|+||+.+++.|+++ | .+++++.|+.... ..+...+..  .++.  | .+..+.++|+|||+++.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl-~~La~el~~--~~i~--~-l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERL-QELQAELGG--GKIL--S-LEEALPEADIVVWVASM  225 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHH-HHHHHHhcc--ccHH--h-HHHHHccCCEEEECCcC
Confidence            467889999999999999999999865 5 4888888864322 222222111  1111  1 33567789999999985


Q ss_pred             C
Q 019470          191 A  191 (340)
Q Consensus       191 ~  191 (340)
                      .
T Consensus       226 ~  226 (340)
T PRK14982        226 P  226 (340)
T ss_pred             C
Confidence            4

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.82  E-value=0.00027  Score=65.59  Aligned_cols=112  Identities=19%  Similarity=0.229  Sum_probs=78.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccc---cccC-CCceEEeeCcccccccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVM---HHFG-NPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~---~~~~-~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      +..++||.|+|+ |.+|..++..|+.+|.  ++..+|++.+.......   +... .....+...|  .+.+.++|+||.
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~--~~~~~~adivIi   79 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGD--YSDCKDADLVVI   79 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCC--HHHhCCCCEEEE
Confidence            345679999997 9999999999999987  89999986554332111   1110 0134444333  245889999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +||...  ....+-.+.+..|..-.+.+++.+++.+.  .+|.+|
T Consensus        80 tag~~~--k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         80 TAGAPQ--KPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             ecCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            998642  22345567888999999999999888764  666666

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.77  E-value=0.00019  Score=67.27  Aligned_cols=94  Identities=20%  Similarity=0.186  Sum_probs=60.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      +++|+|.||||++|.+|++.|.++||   ++..+.+..... +.+.  +.  ..++...|.....+.++|+||.+++.. 
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g-~~l~--~~--g~~i~v~d~~~~~~~~vDvVf~A~g~g-   74 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAG-KELS--FK--GKELKVEDLTTFDFSGVDIALFSAGGS-   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCC-Ceee--eC--CceeEEeeCCHHHHcCCCEEEECCChH-
Confidence            46899999999999999999999887   457776643222 1111  11  124444455444557899999877521 


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                       -+..+.....+.|+++|=.|+..
T Consensus        75 -----------------~s~~~~~~~~~~G~~VIDlS~~~   97 (334)
T PRK14874         75 -----------------VSKKYAPKAAAAGAVVIDNSSAF   97 (334)
T ss_pred             -----------------HHHHHHHHHHhCCCEEEECCchh
Confidence                             13334555556677777667643

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.76  E-value=0.00051  Score=59.53  Aligned_cols=157  Identities=14%  Similarity=0.070  Sum_probs=97.3

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC-CceEEeeCccccc------------c
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEP------------L  177 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~------------~  177 (340)
                      .+++|++||+|-.  .-|+..|++.|.++|.++......+ .....+.+.... ...-++.+|+.+.            .
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            4688999999864  5699999999999999988776543 112222111111 1234678888654            2


Q ss_pred             cCCCCEEEEcccCCCCCCCc--------CChhhHHHHHHHHHHHHHHHHHHc---CCeEE---EEeCcccccCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVHYK--------FNPVKTIKTNVVGTLNMLGLAKRV---GARFL---LTSTSEVYGDPLQHPQK  243 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~--------~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i---~~SS~~v~g~~~~~~~~  243 (340)
                      ..+.|.+||+.|...-....        +.+...+++-..+...+.++|+..   |..+|   |..|.-+.         
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~v---------  152 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVV---------  152 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeec---------
Confidence            34699999999865311111        123333344444444555555432   22333   33332221         


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCce
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i  289 (340)
                                ..-+..+..|+..|.-++.++.+.   |++++.|..|.|
T Consensus       153 ----------PnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPI  191 (259)
T COG0623         153 ----------PNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPI  191 (259)
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccch
Confidence                      112678999999999999988753   899999888865

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.73  E-value=0.00035  Score=55.40  Aligned_cols=95  Identities=16%  Similarity=0.226  Sum_probs=57.4

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccccccc----CCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      ||.|+||||++|+.|++.|++.-+ ++..+..........+....    ....+.+..  .....+.++|+||.+.+.  
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~~--   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALPH--   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SCH--
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCch--
Confidence            689999999999999999999643 55544433332222221111    112233333  333446889999987641  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                      .....+...+.+.|+++|=.|+..
T Consensus        77 ----------------~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   77 ----------------GASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             ----------------HHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             ----------------hHHHHHHHHHhhCCcEEEeCCHHH
Confidence                            223456677788888777777644

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.73  E-value=0.00023  Score=67.70  Aligned_cols=102  Identities=16%  Similarity=0.125  Sum_probs=63.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCccccccccc-CCCceEEeeC-cccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHF-GNPNFELIRH-DVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~-D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ++++|.|.||||++|.+|++.|.++ +.+|..+.+.... .+.+.... .....+.... ++....+.++|+||.+.+. 
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~-  114 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPH-  114 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCH-
Confidence            5569999999999999999999998 5699988875322 11111110 0001111111 1222235789999986641 


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                                       .....++..+ +.|+++|-.|+..-+.+
T Consensus       115 -----------------~~s~~i~~~~-~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        115 -----------------GTTQEIIKAL-PKDLKIVDLSADFRLRD  141 (381)
T ss_pred             -----------------HHHHHHHHHH-hCCCEEEEcCchhccCC
Confidence                             1445566665 45789999999876654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.72  E-value=5.3e-05  Score=61.37  Aligned_cols=76  Identities=26%  Similarity=0.350  Sum_probs=57.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++++++|.|+ |..|+.++..|.+.|.+ |+++.|+.+.. +.+.+.+....+.+...+.....+.++|+||++.+.
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra-~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERA-EALAEEFGGVNIEAIPLEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHH-HHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHH-HHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCC
Confidence            457789999995 99999999999999985 99999865433 233333344567788877777778899999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.70  E-value=0.00065  Score=62.87  Aligned_cols=108  Identities=14%  Similarity=0.038  Sum_probs=75.5

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc--cccccCCCceEEee--Cc-ccccccCCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN--VMHHFGNPNFELIR--HD-VVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~--~D-~~~~~~~~~D~Vih~Ag~  190 (340)
                      ||.|+|++|.||.+++..|+.+|.  ++.++|+.+ ...+.  +.+..  ....+..  .| ...+++.++|+||-+||.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~DL~~~~--~~~~i~~~~~~~~~~~~~~daDivvitaG~   77 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAADLSHIP--TAASVKGFSGEEGLENALKGADVVVIPAGV   77 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEchhhcCC--cCceEEEecCCCchHHHcCCCCEEEEeCCC
Confidence            589999999999999999998875  788898865 22111  11111  1223332  12 234678999999999996


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ...  ...+-.+.+..|..-...+.+..++.+.  .+|.+|-
T Consensus        78 ~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        78 PRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            432  2345667889999999999998888874  5666664

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.67  E-value=0.00036  Score=64.58  Aligned_cols=109  Identities=17%  Similarity=0.207  Sum_probs=75.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccccc---c--CCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHH---F--GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~---~--~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++|.|.|+ |.+|..++..|+.+|  ++|.+++++.+.......+.   .  ......+...+  ...+.++|+||+++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~--~~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGD--YSDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCC--HHHhCCCCEEEEccC
Confidence            37999995 999999999999999  58999999765433221111   0  01122333222  234789999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ....  ...+-.+.+..|..-...+.+..++.+.  .+|.+|-
T Consensus        78 ~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          78 APQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            6432  2345567888999999999999988874  6776663

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.57  E-value=5.4e-05  Score=72.05  Aligned_cols=112  Identities=15%  Similarity=0.233  Sum_probs=67.8

Q ss_pred             CCCCCeEEEEcC----------------chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccc-c
Q 019470          113 KRKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-E  175 (340)
Q Consensus       113 ~~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~  175 (340)
                      ++++++|+||||                +|.+|.+++++|.++|++|+++.+.....   ...  ....+++...+.. +
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~--~~~~~~v~~~~~~~~  256 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPP--GVKSIKVSTAEEMLE  256 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCC--CcEEEEeccHHHHHH
Confidence            478899999998                46799999999999999999988643221   100  1112333333222 2


Q ss_pred             ----cccCCCCEEEEcccCCCCCCCcC---C---hhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          176 ----PLLLEVDQIYHLACPASPVHYKF---N---PVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       176 ----~~~~~~D~Vih~Ag~~~~~~~~~---~---~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                          ....++|++|++||+......+.   .   ....+..|+.-+..+++..++.....+.++
T Consensus       257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~lvg  320 (390)
T TIGR00521       257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQVIVG  320 (390)
T ss_pred             HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcEEEE
Confidence                12346899999999753322111   0   112334666777778877766543333343

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.55  E-value=0.0005  Score=64.29  Aligned_cols=95  Identities=21%  Similarity=0.220  Sum_probs=60.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      +++|.|+||||++|..|++.|.++++   ++..+... ....+.+.  +....+++...|..  .+.++|+||-+++.  
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~--~~~~~l~~~~~~~~--~~~~vD~vFla~p~--   76 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVP--FAGKNLRVREVDSF--DFSQVQLAFFAAGA--   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeec--cCCcceEEeeCChH--HhcCCCEEEEcCCH--
Confidence            46899999999999999999998777   44444332 22222221  11223444444432  35789999986631  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV  233 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v  233 (340)
                                      .-...+++.+.+.|+++|=.|+..=
T Consensus        77 ----------------~~s~~~v~~~~~~G~~VIDlS~~fR  101 (336)
T PRK05671         77 ----------------AVSRSFAEKARAAGCSVIDLSGALP  101 (336)
T ss_pred             ----------------HHHHHHHHHHHHCCCeEEECchhhc
Confidence                            1123377777888888888887654

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.54  E-value=0.001  Score=61.01  Aligned_cols=109  Identities=16%  Similarity=0.140  Sum_probs=74.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc---ccccc--CCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHHF--GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +||.|+|+ |+||+.++-.|+.++.  ++..+|+......-.   +.+..  .....++.. |-..+.+.++|+|+-.||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~-~~~y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG-DGDYEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEec-CCChhhhcCCCEEEEeCC
Confidence            48999999 9999999999988854  899999873332211   11111  111223322 112467889999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....+-.++++.|..-...+.+...+.+.  .|+.++
T Consensus        79 ~pr--KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          79 VPR--KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             CCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            643  23345667889999999999999888875  455554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.49  E-value=0.0011  Score=63.90  Aligned_cols=111  Identities=8%  Similarity=0.057  Sum_probs=78.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-------CC--eEEEEeCCCCCcccccccccCC-----CceEEeeCcccccccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-------GD--SVIVVDNFFTGRKENVMHHFGN-----PNFELIRHDVVEPLLLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-------G~--~V~~l~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~  181 (340)
                      .-+|.|+|++|.+|.+++-.|+..       |.  +++.++++.+.......+....     ..+.+...  ..+.+.++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~--~ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID--PYEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC--CHHHhCcC
Confidence            458999999999999999999988       55  7888888765544322211110     12222222  24568899


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHH-cCC--eEEEEeC
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR-VGA--RFLLTST  230 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~-~~~--~~i~~SS  230 (340)
                      |+||-+||...  ....+-.++++.|+.-...+.+...+ ++.  ++|.+|-
T Consensus       178 DiVVitAG~pr--kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        178 EWALLIGAKPR--GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            99999999642  23345677899999999999999999 554  6777764

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.46  E-value=0.00058  Score=54.42  Aligned_cols=96  Identities=21%  Similarity=0.297  Sum_probs=57.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHh-CCCeEEE-EeCCCCC-cccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIA-RGDSVIV-VDNFFTG-RKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~-l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      ++|.|.|++|-+|+.+++.+.+ .|.++.+ +++.... ......+........+.-.+..+..+..+|++|.+.     
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT-----   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT-----   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC-----
Confidence            4899999999999999999999 5777555 4554311 111111111111222222344455666699999864     


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                                   +-..+...++.|.++|+.+|.-+|
T Consensus        76 -------------~p~~~~~~~~~~~~~g~~~ViGTT   99 (124)
T PF01113_consen   76 -------------NPDAVYDNLEYALKHGVPLVIGTT   99 (124)
T ss_dssp             --------------HHHHHHHHHHHHHHT-EEEEE-S
T ss_pred             -------------ChHHhHHHHHHHHhCCCCEEEECC
Confidence                         335566788889998877665443

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.44  E-value=0.0016  Score=60.55  Aligned_cols=110  Identities=15%  Similarity=0.075  Sum_probs=75.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCC--cccc---ccccc--CCCceEEeeCcccccccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKEN---VMHHF--GNPNFELIRHDVVEPLLLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~--~~~~---~~~~~--~~~~~~~~~~D~~~~~~~~~  181 (340)
                      +.||.|+|++|++|..++..|+.+|.       ++..+|+....  ....   +.+..  ......+. .+ ..+.+.++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~~-~~~~~~da   80 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-TD-PEEAFKDV   80 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-cC-hHHHhCCC
Confidence            34899999999999999999998874       78888885421  1111   11110  00122222 22 23568899


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC---eEEEEe
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTS  229 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~---~~i~~S  229 (340)
                      |+||.+||...  ....+-.+++..|..-...+.+.+++...   .++.+|
T Consensus        81 DvVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        81 DAALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             CEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            99999999642  23456678899999999999999988753   455555

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.41  E-value=0.00072  Score=63.36  Aligned_cols=105  Identities=21%  Similarity=0.304  Sum_probs=68.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc-------------------c-----cccccccCCCceE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-------------------K-----ENVMHHFGNPNFE  167 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~-------------------~-----~~~~~~~~~~~~~  167 (340)
                      ..+.++|+|.|+ |.+|.++++.|.+.|. +++++|+..-..                   +     +.+.+......++
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            456779999995 7899999999999998 888888763110                   0     0011111123445


Q ss_pred             EeeCccc----ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          168 LIRHDVV----EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       168 ~~~~D~~----~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      .+..|+.    +..+.++|+||.+..                 |...-..+-++|.+.++.+|+.+..+.+|
T Consensus       100 ~~~~~~~~~~~~~~~~~~DlVid~~D-----------------~~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        100 PVVTDVTVEELEELVKEVDLIIDATD-----------------NFDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             EEeccCCHHHHHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            5555544    234567999998652                 22223346688899998888887766555

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.41  E-value=0.00071  Score=65.99  Aligned_cols=77  Identities=17%  Similarity=0.104  Sum_probs=50.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC-CCCEEEEcccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHLACPA  191 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vih~Ag~~  191 (340)
                      +.++++++|||++| +|..+++.|+++|++|.+.++......... ..+....+++..++.....+. ++|.||.+.|+.
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~-~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEA-QELLEEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHH-HHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            34678999999987 999999999999999999987543222111 112222444443332222233 389999999863

>PRK05442 malate dehydrogenase; Provisional

Probab=97.39  E-value=0.0026  Score=59.34  Aligned_cols=112  Identities=12%  Similarity=0.031  Sum_probs=75.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCC--cccc---ccccc--CCCceEEeeCcccccccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTG--RKEN---VMHHF--GNPNFELIRHDVVEPLLLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~--~~~~---~~~~~--~~~~~~~~~~D~~~~~~~~  180 (340)
                      +++||.|+|++|.+|..++-.|+..|.       ++..+|+.+..  ....   +.+..  ....+.+..  -..+.+.+
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~y~~~~d   80 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITD--DPNVAFKD   80 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEec--ChHHHhCC
Confidence            345999999999999999999988764       68888885422  1111   11111  001233332  22356889


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeC
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTST  230 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS  230 (340)
                      +|+||-+||...  ....+-.+++..|..-...+.+..++..   ..+|.+|-
T Consensus        81 aDiVVitaG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         81 ADVALLVGARPR--GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             CCEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            999999998632  2334667888999999999999998843   26666663

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.38  E-value=0.0013  Score=61.72  Aligned_cols=98  Identities=17%  Similarity=0.135  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ..++|.|.||||++|..|++.|.+++|   ++..+..... ..+....  .  ..++...++....+.++|+||.+++..
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rs-aGk~~~~--~--~~~~~v~~~~~~~~~~~D~vf~a~p~~   80 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARS-AGKKVTF--E--GRDYTVEELTEDSFDGVDIALFSAGGS   80 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCC-CCCeeee--c--CceeEEEeCCHHHHcCCCEEEECCCcH
Confidence            446899999999999999999999887   4444432211 1111111  1  123333333334567899999877521


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                                        ....+...+.+.|+++|=.|+..=+.
T Consensus        81 ------------------~s~~~~~~~~~~g~~VIDlS~~fR~~  106 (344)
T PLN02383         81 ------------------ISKKFGPIAVDKGAVVVDNSSAFRME  106 (344)
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCchhhcC
Confidence                              13344555666788888888865443

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.37  E-value=0.0025  Score=58.97  Aligned_cols=107  Identities=21%  Similarity=0.226  Sum_probs=74.9

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccc---ccccC---CCceEEeeCcccccccCCCCEEEEccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHHFG---NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~---~~~~~---~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ||.|.|+ |.+|..++..|+.+|.  ++..+|...+......   .+...   ...+.+...|  .+.+.++|+||-+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~--y~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD--YDDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC--HHHhCCCCEEEECCC
Confidence            5789997 9999999999998875  7999998654433221   11111   1234555444  357889999999999


Q ss_pred             CCCCCCCcCC--hhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFN--PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~--~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      .....  ..+  -.+++..|..-...+.+..++.+.  .++.+|
T Consensus        78 ~~~kp--g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          78 PSIDP--GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             CCCCC--CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            64321  222  367888999999999999998875  555555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.34  E-value=0.001  Score=62.43  Aligned_cols=106  Identities=22%  Similarity=0.310  Sum_probs=69.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc-------------------c-----cccccccCCCceE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-------------------K-----ENVMHHFGNPNFE  167 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~-------------------~-----~~~~~~~~~~~~~  167 (340)
                      .++..+|+|.|+ |++|.++++.|.+.|. +++++|...-..                   +     +.+...-....++
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            456679999995 9999999999999998 899998752110                   0     0010001112344


Q ss_pred             EeeCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          168 LIRHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       168 ~~~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      ....++..    +.+.++|+||.+.                 -|...-..+.++|.+.++.+|+.+..+.+|.
T Consensus       100 ~~~~~~~~~~~~~~~~~~DlVid~~-----------------Dn~~~r~~ln~~~~~~~iP~i~~~~~g~~G~  155 (339)
T PRK07688        100 AIVQDVTAEELEELVTGVDLIIDAT-----------------DNFETRFIVNDAAQKYGIPWIYGACVGSYGL  155 (339)
T ss_pred             EEeccCCHHHHHHHHcCCCEEEEcC-----------------CCHHHHHHHHHHHHHhCCCEEEEeeeeeeeE
Confidence            45445433    3456789999864                 2333444677899999999999887766653

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.34  E-value=0.0015  Score=61.62  Aligned_cols=97  Identities=13%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccccccc--------CC--CceEEeeCcccccccCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF--------GN--PNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~--------~~--~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +++|+|+||||++|++|++.|++... ++.++.++............        ..  ..+.+...|.  ..+.++|+|
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~DvV   80 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDP--EAVDDVDIV   80 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCH--HHhcCCCEE
Confidence            46999999999999999999998755 88887554332222221110        00  1122222221  223579999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      +.+...                +  -...+.+.+.+.|+++|-.|+..
T Consensus        81 f~a~p~----------------~--~s~~~~~~~~~~G~~vIDls~~f  110 (349)
T PRK08664         81 FSALPS----------------D--VAGEVEEEFAKAGKPVFSNASAH  110 (349)
T ss_pred             EEeCCh----------------h--HHHHHHHHHHHCCCEEEECCchh
Confidence            876431                1  12344567777888777777643

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.33  E-value=0.0036  Score=58.27  Aligned_cols=112  Identities=13%  Similarity=0.134  Sum_probs=74.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccc---ccc--CCCceEEeeCcccccccCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVM---HHF--GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~---~~~--~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +.++|.|+|| |.+|..++..|+..| .+|..+|++.+.......   +..  ......+...+..+ ++.++|+||.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            4569999996 999999999999888 689999987543321111   110  11122333222223 778999999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      |....  ...+-.+.+..|..-...+.+.+.+...  .+|++|-
T Consensus        82 g~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         82 GVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            86432  2334566778888888888888887764  4666654

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.33  E-value=0.0017  Score=60.03  Aligned_cols=110  Identities=13%  Similarity=0.086  Sum_probs=72.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccccc---cc--CCCceEEee-CcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMH---HF--GNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~---~~--~~~~~~~~~-~D~~~~~~~~~D~Vih~A  188 (340)
                      |+||.|.|+ |.+|..++..|+..|. +|+++|++++.......+   ..  ......+.. .|.  ..+.++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEECC
Confidence            479999998 9999999999998875 999999966543221111   10  011123322 232  3578999999998


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      |...  ....+-.+.+..|+.-...+++...+...  .+|.++-
T Consensus        79 ~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         79 GVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            8532  22234456667888888888888877653  5666653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.32  E-value=0.00067  Score=59.97  Aligned_cols=90  Identities=14%  Similarity=0.215  Sum_probs=52.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-------ccCCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-------LLLEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~~D~Vih~Ag~  190 (340)
                      |++=-.++|+||.+|+++|+++|++|+++++....     .. .....+++.+.+..+.       .+.++|++|||||.
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-----~~-~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRAL-----KP-EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhc-----cc-ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            44444669999999999999999999998763111     00 0112345554433332       23469999999996


Q ss_pred             CCCCC-CcCChhhHHHHHHHHHHH
Q 019470          191 ASPVH-YKFNPVKTIKTNVVGTLN  213 (340)
Q Consensus       191 ~~~~~-~~~~~~~~~~~Nv~g~~~  213 (340)
                      ..... ...+.+++.+++..++..
T Consensus        91 ~d~~~~~~~s~e~~~~~~~~~~~~  114 (227)
T TIGR02114        91 SDYTPVYMTDLEQVQASDNLNEFL  114 (227)
T ss_pred             ccccchhhCCHHHHhhhcchhhhh
Confidence            43222 222344444444443333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.32  E-value=0.00078  Score=57.50  Aligned_cols=61  Identities=25%  Similarity=0.319  Sum_probs=37.7

Q ss_pred             cCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-------ccCCCCEEEEcccCC
Q 019470          123 GGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-------LLLEVDQIYHLACPA  191 (340)
Q Consensus       123 GatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~~D~Vih~Ag~~  191 (340)
                      -.||-.|.+|++++..+|++|+.+.....-.        ....++.++.+..++       .+.++|++||+|++.
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSSLP--------PPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcccc--------ccccceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            4679999999999999999999998642110        023556666554332       345689999999974

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.32  E-value=0.00084  Score=62.98  Aligned_cols=67  Identities=18%  Similarity=0.198  Sum_probs=44.0

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEE---EEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVI---VVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~---~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +|+|.||||++|..|++.|.++++.+.   .+.+.... ...+.  +.  ..++...|+....+.++|+||-+++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~-g~~~~--~~--~~~~~~~~~~~~~~~~~D~v~~a~g   70 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSA-GRKVT--FK--GKELEVNEAKIESFEGIDIALFSAG   70 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC-CCeee--eC--CeeEEEEeCChHHhcCCCEEEECCC
Confidence            589999999999999999999888543   33343221 11111  11  2345555544455678999998876

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.29  E-value=0.0035  Score=51.06  Aligned_cols=99  Identities=16%  Similarity=0.146  Sum_probs=63.6

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEeeCccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIRHDVV  174 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~~~D~~  174 (340)
                      +|+|.|+ |.+|.++++.|...|. +++++|...-....                      .+........++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5889995 9999999999999998 78888765211100                      0000001123334443333


Q ss_pred             c----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          175 E----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       175 ~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                      .    ..+.++|+||.+..                 |......+.+.|++.++.+|..++.+..
T Consensus        80 ~~~~~~~~~~~diVi~~~d-----------------~~~~~~~l~~~~~~~~i~~i~~~~~g~~  126 (143)
T cd01483          80 EDNLDDFLDGVDLVIDAID-----------------NIAVRRALNRACKELGIPVIDAGGLGLG  126 (143)
T ss_pred             hhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCCCcE
Confidence            2    34567999998752                 2344556789999999899988876533

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.28  E-value=0.0018  Score=60.95  Aligned_cols=98  Identities=12%  Similarity=0.181  Sum_probs=60.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccc---cCCC-ceEEeeCcccccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHH---FGNP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~---~~~~-~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +++|+|+||||++|..+++.|.+. +.++.++.+... ..+.+...   +... ...+.+.|.  ....++|+||-+...
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~--~~~~~vD~Vf~alP~   78 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDVHPHLRGLVDLVLEPLDP--EILAGADVVFLALPH   78 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccc-cCcchHHhCcccccccCceeecCCH--HHhcCCCEEEECCCc
Confidence            469999999999999999999987 568777665322 11111111   1100 112222222  134679999986531


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                                        .....++..+.+.|+++|=.|+..-+
T Consensus        79 ------------------~~~~~~v~~a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         79 ------------------GVSMDLAPQLLEAGVKVIDLSADFRL  104 (343)
T ss_pred             ------------------HHHHHHHHHHHhCCCEEEECCcccCC
Confidence                              12345666677788889988886544

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.28  E-value=0.0033  Score=58.30  Aligned_cols=109  Identities=17%  Similarity=0.126  Sum_probs=74.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccc---ccccCC-CceEEee-CcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHHFGN-PNFELIR-HDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~---~~~~~~-~~~~~~~-~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +||.|+|+ |.+|..++..|+..|.  ++..+|++.+......   .+.... ....+.. .|.  +.+.++|+||.+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy--~~~~~adivvitaG   80 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY--SVTANSKVVIVTAG   80 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH--HHhCCCCEEEECCC
Confidence            48999995 9999999999988875  7899998654332111   111100 1123333 332  24789999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ....  ...+-.+++..|..-.+.+.+..++.+.  .+|.+|-
T Consensus        81 ~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          81 ARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            6432  2344567889999999999999988874  5666663

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.26  E-value=0.0055  Score=57.07  Aligned_cols=113  Identities=13%  Similarity=0.126  Sum_probs=75.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccc---cc--cCCCceEEee-CcccccccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVM---HH--FGNPNFELIR-HDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~---~~--~~~~~~~~~~-~D~~~~~~~~~D~Vih~  187 (340)
                      +.+||.|.| +|.+|..++..++..|. +|+.+|++++.......   +.  .......+.. .|.  +++.++|+||.+
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~t   81 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIVT   81 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEEC
Confidence            346899999 59999999999999995 89999987654321111   11  1112234443 343  468899999999


Q ss_pred             ccCCCCCCC---cCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          188 ACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       188 Ag~~~~~~~---~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      +|.......   +.+-.+.+..|+.-.+.+.+.+.+...  .+|.+|-
T Consensus        82 ag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         82 AGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            986432111   114456778888888888888887764  5666664

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.25  E-value=0.0052  Score=56.93  Aligned_cols=108  Identities=18%  Similarity=0.201  Sum_probs=73.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccc---ccccc-CCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKEN---VMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |+|.|.|+ |.+|..++..|+.+|  .+|.++|++.......   +.+.. ......+...|.  +.+.++|+||.+++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~   77 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA   77 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence            47999997 999999999999999  5899999875433211   11110 001223333332  457899999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  ....+..++...|+.-...+++..++.+.  .++.++
T Consensus        78 ~~--~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          78 NQ--KPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            32  22345667788899999999988888764  455554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.23  E-value=0.0041  Score=56.23  Aligned_cols=109  Identities=16%  Similarity=0.082  Sum_probs=75.0

Q ss_pred             EEEEcCchHHHHHHHHHHHhCC----CeEEEEeCCCCCccccc---ccccCC-CceEEeeCcccccccCCCCEEEEcccC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARG----DSVIVVDNFFTGRKENV---MHHFGN-PNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G----~~V~~l~r~~~~~~~~~---~~~~~~-~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |.|+||+|.+|..++..|+..|    .+|..+|+++.......   .+.... ...++...+-..+++.++|+||..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            4799999999999999999998    69999998764432211   111111 123444344345678899999999986


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....-......|+.-.+.+.+..++...  .+|.+|
T Consensus        81 ~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            432  2234456777899999999999988764  566665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.20  E-value=0.0018  Score=52.27  Aligned_cols=102  Identities=22%  Similarity=0.323  Sum_probs=64.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc----------------------cccccCCCceEEeeCc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN----------------------VMHHFGNPNFELIRHD  172 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~----------------------~~~~~~~~~~~~~~~D  172 (340)
                      .++|+|.| .|.+|.++++.|...|. +++++|...-.....                      +.+......++.+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            35899999 69999999999999998 788887652111100                      0001111234444444


Q ss_pred             ccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          173 VVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       173 ~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      +.+    ..+.++|+||.+..                 |......+.+.|++.++.+|+.+..+.+|
T Consensus        81 ~~~~~~~~~~~~~d~vi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDCVD-----------------SLAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEESS-----------------SHHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             cccccccccccCCCEEEEecC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            422    34458999998752                 23344567789999999999888765544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.19  E-value=0.0045  Score=59.82  Aligned_cols=161  Identities=12%  Similarity=0.042  Sum_probs=93.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC---CC----eEEEEeCC--CCCcccc---ccccc-C-CCceEEeeCcccccccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR---GD----SVIVVDNF--FTGRKEN---VMHHF-G-NPNFELIRHDVVEPLLLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~---G~----~V~~l~r~--~~~~~~~---~~~~~-~-~~~~~~~~~D~~~~~~~~~D  182 (340)
                      .+|+||||+|.||.+|+-.+++=   |.    .++.+|..  .+...-.   +.+.. . ...+.+...  ...++.++|
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~--~~ea~~daD  201 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTD--LDVAFKDAH  201 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEEC--CHHHhCCCC
Confidence            48999999999999999877652   32    35556652  1111111   11100 0 012444432  346788999


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcc------cccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSE------VYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~------v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||-+||...  ....+-.+++..|..-...+.++..+..   .+++.+.|=-      +.-...            ..+
T Consensus       202 vvIitag~pr--k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~a------------pgi  267 (452)
T cd05295         202 VIVLLDDFLI--KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYA------------PSI  267 (452)
T ss_pred             EEEECCCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHc------------CCC
Confidence            9999998642  2334566788999999999999888776   3666666410      110000            011


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                      .+....+.+.....++...+++..++....|+-.+|+|..
T Consensus       268 P~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeH  307 (452)
T cd05295         268 PRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNI  307 (452)
T ss_pred             CHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEcc
Confidence            1112333333443444445556668887777777787864

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.17  E-value=0.00043  Score=63.55  Aligned_cols=76  Identities=14%  Similarity=0.161  Sum_probs=49.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCC--CcccccccccC--CCceEEeeCcccc-----cccCCCCE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFT--GRKENVMHHFG--NPNFELIRHDVVE-----PLLLEVDQ  183 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~--~~~~~~~~~~~--~~~~~~~~~D~~~-----~~~~~~D~  183 (340)
                      .++++++|+|| |++|++++..|++.|.+ |++++|+..  .+.+.+.+.+.  ...+.+...|+.+     ..+.++|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            46789999998 89999999999999985 999999752  12222222111  1122333344332     23456899


Q ss_pred             EEEcccC
Q 019470          184 IYHLACP  190 (340)
Q Consensus       184 Vih~Ag~  190 (340)
                      |||+...
T Consensus       203 lINaTp~  209 (289)
T PRK12548        203 LVNATLV  209 (289)
T ss_pred             EEEeCCC
Confidence            9997644

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.13  E-value=0.0074  Score=55.81  Aligned_cols=109  Identities=15%  Similarity=0.144  Sum_probs=72.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccccccc-----CCCceEEee-CcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF-----GNPNFELIR-HDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~-----~~~~~~~~~-~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |+|.|.|+ |++|..++..|+.+|. +|+++|+.+...........     ......+.. .|. + .+.++|+||-++|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~-~-~~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNY-A-DTANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCH-H-HhCCCCEEEEcCC
Confidence            48999995 9999999999999887 89999986443221111000     011122322 333 2 3688999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ...  ....+-.+.+..|..-...+++...+.+.  .+|.+|-
T Consensus        79 ~p~--~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        79 LPR--KPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            532  22234456788999999999998877753  5776664

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=97.12  E-value=0.0018  Score=59.10  Aligned_cols=105  Identities=15%  Similarity=0.219  Sum_probs=70.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~~  170 (340)
                      +...+|||.| .|.+|.++++.|+..|. +|+++|...-...                      +.+.+.-....++...
T Consensus        17 L~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~   95 (286)
T cd01491          17 LQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST   95 (286)
T ss_pred             HhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence            4556899999 68999999999999998 7777775421110                      0011111123555666


Q ss_pred             CcccccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          171 HDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       171 ~D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      .++....+.+.|+||.+..                 |......+-++|++.++.||...+.+.+|.
T Consensus        96 ~~~~~~~l~~fdvVV~~~~-----------------~~~~~~~in~~c~~~~ipfI~a~~~G~~G~  144 (286)
T cd01491          96 GPLTTDELLKFQVVVLTDA-----------------SLEDQLKINEFCHSPGIKFISADTRGLFGS  144 (286)
T ss_pred             ccCCHHHHhcCCEEEEecC-----------------CHHHHHHHHHHHHHcCCEEEEEeccccEEE
Confidence            6655667778998887642                 333444577899999999999988777663

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK04148 hypothetical protein; Provisional

Probab=97.12  E-value=0.0023  Score=51.34  Aligned_cols=89  Identities=22%  Similarity=0.275  Sum_probs=64.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc---CCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL---LEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~D~Vih~Ag~~  191 (340)
                      +++++++.| +| -|.+++..|.+.|++|+++|.++......     ....++++..|++++.+   .++|.|+..=   
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-----~~~~~~~v~dDlf~p~~~~y~~a~liysir---   85 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-----KKLGLNAFVDDLFNPNLEIYKNAKLIYSIR---   85 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-----HHhCCeEEECcCCCCCHHHHhcCCEEEEeC---
Confidence            456899999 56 88899999999999999999976532211     12356899999988754   4789988642   


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEE
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL  227 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~  227 (340)
                                    .-.+-...+++.+++.++.+++
T Consensus        86 --------------pp~el~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         86 --------------PPRDLQPFILELAKKINVPLII  107 (134)
T ss_pred             --------------CCHHHHHHHHHHHHHcCCCEEE
Confidence                          1223345789999999985443

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.11  E-value=0.004  Score=59.16  Aligned_cols=111  Identities=11%  Similarity=0.079  Sum_probs=73.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-e----EEE--E--eCCCCCcccccccccC-----CCceEEeeCcccccccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-S----VIV--V--DNFFTGRKENVMHHFG-----NPNFELIRHDVVEPLLLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~----V~~--l--~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~  181 (340)
                      ..+|.|+|++|.+|.+++-.|+..|. .    |.+  +  +++.+.......+...     ...+.+...  ....+.++
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~--~y~~~kda  121 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID--PYEVFEDA  121 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC--CHHHhCCC
Confidence            34999999999999999999998864 2    333  3  5544433221111110     012222222  23668899


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEeC
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST  230 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~SS  230 (340)
                      |+||.+||...  ....+-.+++..|+.-...+.+..++.. .  ++|.+|-
T Consensus       122 DIVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       122 DWALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             CEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            99999999642  2334567788999999999999998843 3  6666663

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.10  E-value=0.0024  Score=55.42  Aligned_cols=105  Identities=15%  Similarity=0.202  Sum_probs=66.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.| .|.+|.++++.|...|. +++++|...-...                      +.+........++.+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            45667899999 79999999999999997 8888887521100                      001011011233333


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ..++..    ..+.++|+||.+..                 |...-..+.+.|++.++.+|+.+..+.+|
T Consensus        97 ~~~i~~~~~~~~~~~~D~Vi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356        97 KERVTAENLELLINNVDLVLDCTD-----------------NFATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             hhcCCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            333322    34567999998652                 22333457788999998899888765554

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.08  E-value=0.0047  Score=55.68  Aligned_cols=67  Identities=15%  Similarity=0.251  Sum_probs=41.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++|.|+|++|.+|+.+++.+.+. +.++.++...........      ...++...+..+..+.++|+||+++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc------CCCCccccCCHHHhccCCCEEEECCC
Confidence            68999999999999999988875 667776543222211111      11122222223334457999998763

>PLN02602 lactate dehydrogenase

Probab=97.07  E-value=0.0062  Score=57.31  Aligned_cols=108  Identities=15%  Similarity=0.154  Sum_probs=74.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccc---cccC-CCceEEee-CcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVM---HHFG-NPNFELIR-HDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~---~~~~-~~~~~~~~-~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +||.|+|+ |.+|..++-.|+.+|.  ++..+|++.........   +... .....+.. .|  -+.+.++|+||-+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d--y~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD--YAVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC--HHHhCCCCEEEECCC
Confidence            69999995 9999999999998875  79999986543322111   1110 01133433 23  234789999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ....  ...+-.+++..|+.-...+.+..++.+.  .+|.+|
T Consensus       115 ~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        115 ARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            6432  2334567888999999999999988864  677666

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.04  E-value=0.0033  Score=54.34  Aligned_cols=105  Identities=16%  Similarity=0.309  Sum_probs=64.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~~  170 (340)
                      .+..+|+|.|+.| +|.++++.|...|. +++++|...-....                      .+.+.-....++...
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~   97 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT   97 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence            4566899999655 99999999999998 68888765211100                      011110112333333


Q ss_pred             Cccc---ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          171 HDVV---EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       171 ~D~~---~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      ..+.   ...+.++|+||.+..                 |...-..+-+.|++.++.+|+.++.+.+|.
T Consensus        98 ~~~~~~~~~~~~~~dvVi~~~~-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  149 (197)
T cd01492          98 DDISEKPEEFFSQFDVVVATEL-----------------SRAELVKINELCRKLGVKFYATGVHGLFGF  149 (197)
T ss_pred             cCccccHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecCCEEE
Confidence            3222   123567899997542                 223334566889999999999988766653

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.04  E-value=0.0041  Score=58.59  Aligned_cols=98  Identities=12%  Similarity=0.162  Sum_probs=59.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEE-eCCCCCccccccccc---CCC-ceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGRKENVMHHF---GNP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l-~r~~~~~~~~~~~~~---~~~-~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ++|.|.||||++|..+++.|.+. +.++..+ +.... ..+.+....   ... ...+...|. +..+.++|+||.+...
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~s-agk~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRES-AGKPVSEVHPHLRGLVDLNLEPIDE-EEIAEDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchh-cCCChHHhCccccccCCceeecCCH-HHhhcCCCEEEECCCc
Confidence            48999999999999999999987 5577754 43321 111111111   111 122222232 2233479999987642


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                                        .....++..+.+.|+++|-.|+..=+
T Consensus        79 ------------------~~s~~~~~~~~~~G~~VIDlS~~fR~  104 (346)
T TIGR01850        79 ------------------GVSAELAPELLAAGVKVIDLSADFRL  104 (346)
T ss_pred             ------------------hHHHHHHHHHHhCCCEEEeCChhhhc
Confidence                              13445667777788899999986543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.03  E-value=0.0042  Score=54.96  Aligned_cols=105  Identities=19%  Similarity=0.190  Sum_probs=65.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.| .|.+|.++++.|...|. +++++|...-....                      .+........++.+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            34567999999 79999999999999998 77777654211000                      00000011234444


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ..++..    +.+.++|+||.+..                 |...-..+.++|.+.++.+|+.+..+.+|
T Consensus        97 ~~~i~~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757          97 NERLDAENAEELIAGYDLVLDCTD-----------------NFATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             cceeCHHHHHHHHhCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            433322    34567999998763                 22233457788999998888887665444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.02  E-value=0.0059  Score=56.34  Aligned_cols=108  Identities=20%  Similarity=0.200  Sum_probs=72.5

Q ss_pred             EEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccc---cccCC-CceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVM---HHFGN-PNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~---~~~~~-~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      |.|.|+ |++|..++..|+..|  .++.++|++.+.......   +.... ....+...+. .+.+.++|+||.++|...
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence            467885 889999999999988  589999987543322111   11110 1223332222 357889999999998532


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                        ....+-.+.+..|+.-.+.+.+..++.+.  .+|.+|-
T Consensus        79 --~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          79 --KPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence              22345567788999999999999988864  6666663

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.01  E-value=0.006  Score=57.38  Aligned_cols=98  Identities=13%  Similarity=0.170  Sum_probs=57.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccC--------C--CceEEeeCcccccccCCCCEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFG--------N--PNFELIRHDVVEPLLLEVDQIY  185 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~--------~--~~~~~~~~D~~~~~~~~~D~Vi  185 (340)
                      ++|.|+|++|++|++|++.|.+++ .+|..+..+.............        .  ..+.+...+  ...+.++|+|+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~DvVf   78 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPE--PVASKDVDIVF   78 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCC--HHHhccCCEEE
Confidence            479999999999999999888876 4887774432222111111100        0  111111122  22346799999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                      .+..                .++  ...+.+.+.+.|+++|..|+..=+
T Consensus        79 ~a~p----------------~~~--s~~~~~~~~~~G~~VIDlsg~fR~  109 (341)
T TIGR00978        79 SALP----------------SEV--AEEVEPKLAEAGKPVFSNASNHRM  109 (341)
T ss_pred             EeCC----------------HHH--HHHHHHHHHHCCCEEEECChhhcc
Confidence            8763                121  223346667788888888876543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.99  E-value=0.0033  Score=56.02  Aligned_cols=105  Identities=15%  Similarity=0.119  Sum_probs=65.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.| .|.+|.++++.|...|. +++++|...-....                      .+.+......++.+
T Consensus        21 ~L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            45667899999 69999999999999997 77777765221100                      00000011223333


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ...+..    +.+.++|+||.+..                 |......+-++|.+.++.+|+.++.+.+|
T Consensus       100 ~~~i~~~~~~~~~~~~DlVvd~~D-----------------~~~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       100 NAKLDDAELAALIAEHDIVVDCTD-----------------NVEVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             eccCCHHHHHHHhhcCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            322222    24567899998652                 23334556789999999899877655444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.98  E-value=0.0085  Score=51.79  Aligned_cols=105  Identities=15%  Similarity=0.278  Sum_probs=65.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc------------------------cccccCCCceEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN------------------------VMHHFGNPNFEL  168 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~------------------------~~~~~~~~~~~~  168 (340)
                      .+..+|+|.|++| +|.++++.|+..|. +++++|...-.....                        +.+.-...+++.
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            4556899999655 99999999999997 688887652110000                        000001123344


Q ss_pred             eeCccc------ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          169 IRHDVV------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       169 ~~~D~~------~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      +..+..      ...+.++|+||.+..                 +......+-+.|++.++.+|+.++.+.+|.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G~  152 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEE-----------------NYERTAKVNDVCRKHHIPFISCATYGLIGY  152 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEEE
Confidence            333332      123457888886531                 233344567899999999999998776654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.98  E-value=0.0024  Score=55.43  Aligned_cols=76  Identities=17%  Similarity=0.287  Sum_probs=53.4

Q ss_pred             CCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       109 p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |.-.+.++++|+|.|| |-+|...++.|++.|++|+++.+....   .+........+.+...+.....+.++|.||-+.
T Consensus         3 Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~---~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT   78 (202)
T PRK06718          3 PLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTE---NLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT   78 (202)
T ss_pred             ceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCH---HHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence            3345678899999996 999999999999999999999753221   111122223456655555566678899888654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=96.97  E-value=0.00044  Score=63.51  Aligned_cols=75  Identities=17%  Similarity=0.210  Sum_probs=53.6

Q ss_pred             eEEEEcCchHHHHHHHHHHHh----CCCeEEEEeCCCCCcccccccccC-----CCceEEeeCccccc-----ccCCCCE
Q 019470          118 RIVVTGGAGFVGSHLVDRLIA----RGDSVIVVDNFFTGRKENVMHHFG-----NPNFELIRHDVVEP-----LLLEVDQ  183 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~----~G~~V~~l~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~-----~~~~~D~  183 (340)
                      .++|.||+||-|.++++++++    .|...-+..|++++..+.+.+...     -...-++.+|..++     ....+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            589999999999999999999    677888888886654433322111     01222667777554     4567999


Q ss_pred             EEEcccCCC
Q 019470          184 IYHLACPAS  192 (340)
Q Consensus       184 Vih~Ag~~~  192 (340)
                      |+||+|+..
T Consensus        87 ivN~vGPyR   95 (423)
T KOG2733|consen   87 IVNCVGPYR   95 (423)
T ss_pred             EEeccccce
Confidence            999999753

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.96  E-value=0.0039  Score=55.79  Aligned_cols=105  Identities=18%  Similarity=0.139  Sum_probs=64.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.|+ |.+|.++++.|+..|. +++++|...-...                      +.+.+......++.+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            456779999996 9999999999999997 7777766421100                      000001111233444


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ...+.+    ..+.++|+||.+..                 |...-..+.++|.+.++.+|+.+..+.+|
T Consensus       108 ~~~i~~~~~~~~~~~~DiVi~~~D-----------------~~~~r~~ln~~~~~~~ip~v~~~~~g~~G  160 (245)
T PRK05690        108 NARLDDDELAALIAGHDLVLDCTD-----------------NVATRNQLNRACFAAKKPLVSGAAIRMEG  160 (245)
T ss_pred             eccCCHHHHHHHHhcCCEEEecCC-----------------CHHHHHHHHHHHHHhCCEEEEeeeccCCc
Confidence            433332    23567999998752                 22333457788999988888866544333

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.92  E-value=0.0016  Score=59.35  Aligned_cols=74  Identities=22%  Similarity=0.351  Sum_probs=49.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++++++|+|+ |.+|+.++..|.+.| .+|++++|+.+... .+...+... .+.+ ..+ ....+.++|+||++...
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~-~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~  195 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAE-ELAKLFGALGKAEL-DLE-LQEELADFDLIINATSA  195 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhccceee-ccc-chhccccCCEEEECCcC
Confidence            456789999996 999999999999999 69999999754332 222222111 1222 112 12445679999998754

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.92  E-value=0.003  Score=58.48  Aligned_cols=34  Identities=21%  Similarity=0.248  Sum_probs=31.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++|.|+| .|.+|..++..|+++|++|+++++++.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~   36 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPA   36 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHH
Confidence            4799999 899999999999999999999999753

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.83  E-value=0.0042  Score=58.74  Aligned_cols=105  Identities=16%  Similarity=0.083  Sum_probs=66.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      .++..+|+|.| .|.+|.++++.|+..|. +++++|...-....                      .+.+.-....++.+
T Consensus        25 ~L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            45667999999 59999999999999998 78887765211000                      00001011234444


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ...+..    ..+.++|+||.+..                 |...-..+.++|.+.++.||+.+..+.+|
T Consensus       104 ~~~i~~~~~~~~~~~~DvVvd~~d-----------------~~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        104 VRRLTWSNALDELRDADVILDGSD-----------------NFDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             EeecCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            444432    34568999998762                 23333446788999998888887655444

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.81  E-value=0.0056  Score=56.56  Aligned_cols=101  Identities=15%  Similarity=0.279  Sum_probs=64.9

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEeeCccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIRHDVV  174 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~~~D~~  174 (340)
                      +|+|.| .|.+|.++++.|+..|. +++++|...-....                      .+.+.-....++....++.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            589999 59999999999999997 77777764211100                      0000001123444444444


Q ss_pred             c-----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          175 E-----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       175 ~-----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      +     ..+.+.|+||.+.                 -|...-..+-+.|...++.||..++.+.+|.
T Consensus        80 ~~~~~~~f~~~~DvVv~a~-----------------Dn~~ar~~in~~c~~~~ip~I~~gt~G~~G~  129 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNAL-----------------DNLAARRHVNKMCLAADVPLIESGTTGFLGQ  129 (312)
T ss_pred             CccchHHHHhcCCEEEECC-----------------CCHHHHHHHHHHHHHCCCCEEEEecCcceeE
Confidence            3     3456789998764                 2444455677889999888998887766553

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.75  E-value=0.01  Score=55.45  Aligned_cols=98  Identities=18%  Similarity=0.192  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      +.++|.|.||||++|..|++.|.++.+   ++..+.... .....+.  +....+.+.  +..+..+.++|+||.+++. 
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~-saG~~~~--~~~~~~~v~--~~~~~~~~~~Dvvf~a~p~-   76 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEE-SAGETLR--FGGKSVTVQ--DAAEFDWSQAQLAFFVAGR-   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccC-cCCceEE--ECCcceEEE--eCchhhccCCCEEEECCCH-
Confidence            456899999999999999999988644   666664331 1112221  222223333  3333334679999987642 


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                                       .....++..+.+.|+++|=.|+..=+.
T Consensus        77 -----------------~~s~~~~~~~~~~g~~VIDlS~~fRl~  103 (336)
T PRK08040         77 -----------------EASAAYAEEATNAGCLVIDSSGLFALE  103 (336)
T ss_pred             -----------------HHHHHHHHHHHHCCCEEEECChHhcCC
Confidence                             123345666666788888888765443

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.74  E-value=0.0086  Score=52.05  Aligned_cols=74  Identities=12%  Similarity=0.087  Sum_probs=55.2

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      -.+.++++|+|.| .|-+|..-++.|++.|.+|++++....   +.+.......++.++..+.....+.++|.||-+.
T Consensus         4 ~l~l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at   77 (205)
T TIGR01470         4 FANLEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELE---SELTLLAEQGGITWLARCFDADILEGAFLVIAAT   77 (205)
T ss_pred             EEEcCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECC
Confidence            3457788999999 599999999999999999999976433   2222222334788888887777788899988543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08328 hypothetical protein; Provisional

Probab=96.72  E-value=0.0064  Score=53.91  Aligned_cols=106  Identities=21%  Similarity=0.247  Sum_probs=65.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------c-------------cccccCCCceEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------N-------------VMHHFGNPNFEL  168 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------~-------------~~~~~~~~~~~~  168 (340)
                      ..+..+|+|.| .|.+|.++++.|...|. +++++|...-....          .             +...-....++.
T Consensus        24 ~L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            34566899999 69999999999999997 78888754211000          0             000001122333


Q ss_pred             eeCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          169 IRHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       169 ~~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      ....+.+    ..+.++|+||.+..                 |...-..+.++|++.++.+|+.++.+.+|.
T Consensus       103 ~~~~~~~~~~~~~l~~~D~Vid~~d-----------------~~~~r~~l~~~~~~~~ip~i~g~~~g~~G~  157 (231)
T PRK08328        103 FVGRLSEENIDEVLKGVDVIVDCLD-----------------NFETRYLLDDYAHKKGIPLVHGAVEGTYGQ  157 (231)
T ss_pred             EeccCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeeccCEEE
Confidence            3332222    23567888887652                 222333456789999999999888776664

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.72  E-value=0.0085  Score=52.90  Aligned_cols=69  Identities=19%  Similarity=0.316  Sum_probs=50.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~Ag  189 (340)
                      |+++|.| .|-+|..+++.|.++|++|+++++.+....+...   ....+..+.+|-+++.      +.++|+++-..+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~---~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLA---DELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh---hhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            5788888 6999999999999999999999986544333221   1245677777776652      457899996654

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.71  E-value=0.00078  Score=61.44  Aligned_cols=74  Identities=15%  Similarity=0.258  Sum_probs=50.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC--CCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      .++|-|||||.|..++++|+.+|.+-....|+..+.. .+...+.  ...+.+...+..++.+.+.++|+||+|+..
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~-~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt   83 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLD-ALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT   83 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHH-HHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccc
Confidence            6899999999999999999999988766666543322 1111111  112222224455666778999999999753

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.70  E-value=0.014  Score=52.08  Aligned_cols=114  Identities=19%  Similarity=0.151  Sum_probs=74.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeE---EEEeCCC-CCcccccccccCCCceEEee-CcccccccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSV---IVVDNFF-TGRKENVMHHFGNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V---~~l~r~~-~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~D~Vih~A  188 (340)
                      .++.+|.|.||.|+||+-|.. |++....|   ...|... +.-...+.+.-....+.-+. .|..+.++.++|+||--|
T Consensus        26 ~~~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPA  104 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPA  104 (345)
T ss_pred             cCcceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecC
Confidence            345589999999999999975 55565533   3333322 22222333322233333333 455667889999999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      |..+  .....-++++++|..-...+..++.++-.  .+.++|-
T Consensus       105 GVPR--KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  105 GVPR--KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             CCCC--CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            9643  33445678899999999999988877653  5666663

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.70  E-value=0.0061  Score=58.41  Aligned_cols=106  Identities=21%  Similarity=0.175  Sum_probs=66.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      .++..+|+|.| .|.+|.++++.|...|. +++++|...-....                      .+.+.-...+++.+
T Consensus        39 ~L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            34667899999 69999999999999998 77777654211000                      00000011233334


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      ...+..    ..+.++|+||.+..                 |...-..+-++|.+.++.||+.+..+.+|.
T Consensus       118 ~~~i~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~G~  171 (392)
T PRK07878        118 EFRLDPSNAVELFSQYDLILDGTD-----------------NFATRYLVNDAAVLAGKPYVWGSIYRFEGQ  171 (392)
T ss_pred             eccCChhHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEEE
Confidence            433332    24567899997652                 333344577889999988998887766653

>PRK08223 hypothetical protein; Validated

Probab=96.69  E-value=0.0073  Score=54.93  Aligned_cols=104  Identities=13%  Similarity=0.048  Sum_probs=63.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      .++..+|+|.| .|++|.++++.|+..|. ++.++|...-....                      .+.+.-...+++.+
T Consensus        24 kL~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            45667899999 69999999999999997 77777664211100                      00000011234444


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      ...+.+    +.+.++|+||.+.-         +      .++..-..+.++|.+.++.+|+.+..+
T Consensus       103 ~~~l~~~n~~~ll~~~DlVvD~~D---------~------~~~~~r~~ln~~c~~~~iP~V~~~~~g  154 (287)
T PRK08223        103 PEGIGKENADAFLDGVDVYVDGLD---------F------FEFDARRLVFAACQQRGIPALTAAPLG  154 (287)
T ss_pred             ecccCccCHHHHHhCCCEEEECCC---------C------CcHHHHHHHHHHHHHcCCCEEEEeccC
Confidence            443433    34567899986541         1      122334567789999998888876543

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.69  E-value=0.0032  Score=57.18  Aligned_cols=73  Identities=19%  Similarity=0.286  Sum_probs=48.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC-CceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .++++++|+|+ |.+|+.++..|++.|++|++++|+..... .+.+.+.. ..+.....+  +....++|+||++.+.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~-~la~~~~~~~~~~~~~~~--~~~~~~~DivInatp~  188 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAE-ELAERFQRYGEIQAFSMD--ELPLHRVDLIINATSA  188 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhcCceEEechh--hhcccCccEEEECCCC
Confidence            35679999997 89999999999999999999988654322 22211111 112222222  2234579999998865

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.66  E-value=0.0027  Score=54.63  Aligned_cols=66  Identities=23%  Similarity=0.183  Sum_probs=41.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      |++.| ||+|.||..|+++|.+.||+|++-.|+.+...+.....+.. .   +.+-....+.+.+|+||-.
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~-~---i~~~~~~dA~~~aDVVvLA   67 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP-L---ITGGSNEDAAALADVVVLA   67 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc-c---cccCChHHHHhcCCEEEEe
Confidence            45555 55999999999999999999999977655443333222211 1   2222223344567877753

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.66  E-value=0.043  Score=45.24  Aligned_cols=135  Identities=19%  Similarity=0.110  Sum_probs=74.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcc-ccc-----------c--cCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-VEP-----------L--LLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~-----------~--~~~~D  182 (340)
                      .+|+|-||-|-+|+.+++.+.+++|-|.-+|..+....+.         -.+++.+- +.+           .  -+++|
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~---------sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADS---------SILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccc---------eEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            3799999999999999999999999998887653221110         11112111 111           1  23699


Q ss_pred             EEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeC-cccccCCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTST-SEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       183 ~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS-~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      .|+..||-.....     ..++.+-+++-.+...-.-...+..+ +. -++-+.. -...+.                ..
T Consensus        75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~g----------------TP  138 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGG----------------TP  138 (236)
T ss_pred             eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCC----------------CC
Confidence            9999887432221     11233333333333222222333222 11 2333332 222221                11


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG  276 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~  276 (340)
                      ..-+||..|.+..++.+.++.+
T Consensus       139 gMIGYGMAKaAVHqLt~SLaak  160 (236)
T KOG4022|consen  139 GMIGYGMAKAAVHQLTSSLAAK  160 (236)
T ss_pred             cccchhHHHHHHHHHHHHhccc
Confidence            2257999999999999998754

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.65  E-value=0.01  Score=51.93  Aligned_cols=105  Identities=19%  Similarity=0.213  Sum_probs=63.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc---ccc------------------cccccCCCceEEee
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR---KEN------------------VMHHFGNPNFELIR  170 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~---~~~------------------~~~~~~~~~~~~~~  170 (340)
                      .++..+|+|.| .|.+|.++++.|.+.|. +++++|...-..   ...                  +........++.+.
T Consensus        25 ~L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            34666899999 69999999999999998 688887752110   000                  00000112333333


Q ss_pred             Ccccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CCeEEEEeCccccc
Q 019470          171 HDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GARFLLTSTSEVYG  235 (340)
Q Consensus       171 ~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~~~i~~SS~~v~g  235 (340)
                      ..+.+    ..+.++|+||.+.                 -|......+.+.|.+. ++.+|+.+...-|+
T Consensus       104 ~~i~~~~~~~~~~~~DvVI~a~-----------------D~~~~r~~l~~~~~~~~~~p~I~~~~~~~~~  156 (212)
T PRK08644        104 EKIDEDNIEELFKDCDIVVEAF-----------------DNAETKAMLVETVLEHPGKKLVAASGMAGYG  156 (212)
T ss_pred             eecCHHHHHHHHcCCCEEEECC-----------------CCHHHHHHHHHHHHHhCCCCEEEeehhhccC
Confidence            33322    3355789999764                 1333344567888887 88888886554444

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.60  E-value=0.0089  Score=57.01  Aligned_cols=105  Identities=22%  Similarity=0.270  Sum_probs=64.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc-----------------c-ccccccc----CCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-----------------K-ENVMHHF----GNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~-----------------~-~~~~~~~----~~~~~~~~  169 (340)
                      ..+.++|+|.| .|.+|.++++.|+..|. +++++|+..-..                 + +...+.+    ....++..
T Consensus       132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            35677899998 58999999999999998 788888752100                 0 0000111    11222333


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ...+.+    ..+.++|+||++..                 |...-..+.++|.+.++.+|+.+..+.+|
T Consensus       211 ~~~~~~~~~~~~~~~~D~Vv~~~d-----------------~~~~r~~ln~~~~~~~ip~i~~~~~g~~g  263 (376)
T PRK08762        211 QERVTSDNVEALLQDVDVVVDGAD-----------------NFPTRYLLNDACVKLGKPLVYGAVFRFEG  263 (376)
T ss_pred             eccCChHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            322221    24567999998762                 22223346788999999899887654443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.60  E-value=0.0039  Score=51.31  Aligned_cols=74  Identities=23%  Similarity=0.368  Sum_probs=47.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .++++++|+|+ |.+|..+++.|.+.| ++|++++|+.....+ ....+....++....|. .+.+.++|+||++...
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~Dvvi~~~~~   91 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKA-LAERFGELGIAIAYLDL-EELLAEADLIINTTPV   91 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH-HHHHHhhcccceeecch-hhccccCCEEEeCcCC
Confidence            45679999996 999999999999996 789999886443322 11111111011111122 2336789999998864

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.57  E-value=0.0058  Score=51.34  Aligned_cols=57  Identities=21%  Similarity=0.267  Sum_probs=45.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++++|+|+|+++.+|..+++.|.++|.+|+++.|..                     +.....+.++|+||.+.+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCCC
Confidence            57888999999877789999999999999999988742                     1122356779999987763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.55  E-value=0.019  Score=52.92  Aligned_cols=105  Identities=18%  Similarity=0.159  Sum_probs=71.9

Q ss_pred             EEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccc-----cCCCceEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          121 VTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHH-----FGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       121 VtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      |.| .|.||..++..|+.++.  ++..+|++.+.......+.     +....+.+...|  .+.+.++|+||-+||....
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daDivVitag~~rk   77 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGD--YSDCKDADLVVITAGAPQK   77 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCC--HHHHCCCCEEEECCCCCCC
Confidence            346 59999999999998875  7999998654433221111     111234444322  3578899999999996432


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                        ...+-.+.+..|+.-...+.+.+++++.  .+|.+|-
T Consensus        78 --~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        78 --PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence              2345567889999999999999988874  6777664

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.54  E-value=0.013  Score=52.05  Aligned_cols=100  Identities=17%  Similarity=0.202  Sum_probs=63.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----c------------------ccccccCCCceEEeeCccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----E------------------NVMHHFGNPNFELIRHDVV  174 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----~------------------~~~~~~~~~~~~~~~~D~~  174 (340)
                      +|+|.| .|.+|.++++.|+..|. +++++|...-...    .                  .+.+.....+++....++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            488998 79999999999999997 7777776521100    0                  0000001123334444331


Q ss_pred             ------ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          175 ------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       175 ------~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                            +..+.++|+||.+.                 -|+..-..+-+.|.+.++.+|..++.+-+|
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~-----------------Dn~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNAL-----------------DNIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             hhhhchHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence                  22456789998764                 345556667888999888888887766554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.53  E-value=0.019  Score=43.98  Aligned_cols=89  Identities=24%  Similarity=0.258  Sum_probs=57.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      +.++++|+|+|| |-+|..=++.|++.|.+|+++....    +...     ..+++..-+. +..+.++|.||-+.+   
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~----~~~~-----~~i~~~~~~~-~~~l~~~~lV~~at~---   69 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI----EFSE-----GLIQLIRREF-EEDLDGADLVFAATD---   69 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE----HHHH-----TSCEEEESS--GGGCTTESEEEE-SS---
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch----hhhh-----hHHHHHhhhH-HHHHhhheEEEecCC---
Confidence            567889999996 9999999999999999999998743    1111     3444555544 356788998885432   


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                                    |-.....+.+.|++.+ .++++..
T Consensus        70 --------------d~~~n~~i~~~a~~~~-i~vn~~D   92 (103)
T PF13241_consen   70 --------------DPELNEAIYADARARG-ILVNVVD   92 (103)
T ss_dssp             ---------------HHHHHHHHHHHHHTT-SEEEETT
T ss_pred             --------------CHHHHHHHHHHHhhCC-EEEEECC
Confidence                          1112245677887765 5555554

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.52  E-value=0.0049  Score=52.69  Aligned_cols=34  Identities=38%  Similarity=0.525  Sum_probs=27.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      |+|.|.| .||+|..++..|++.|++|+++|.+..
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~   34 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEE   34 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChH
Confidence            6899997 899999999999999999999998743

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.50  E-value=0.01  Score=56.40  Aligned_cols=105  Identities=16%  Similarity=0.235  Sum_probs=66.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.| .|.+|.++++.|...|. +++++|...-....                      .+.......+++.+
T Consensus        38 ~l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            45667899999 69999999999999997 88888765211000                      00000011233333


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ...+..    +.+.++|+||.+.                 -|...-..+-++|.+.++.+|+.+..+-+|
T Consensus       117 ~~~i~~~~~~~~~~~~DlVid~~-----------------Dn~~~r~~in~~~~~~~iP~v~~~~~g~~G  169 (370)
T PRK05600        117 RERLTAENAVELLNGVDLVLDGS-----------------DSFATKFLVADAAEITGTPLVWGTVLRFHG  169 (370)
T ss_pred             eeecCHHHHHHHHhCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEEecCEE
Confidence            333332    3456799999876                 234444566788999988888777654443

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.49  E-value=0.0047  Score=53.51  Aligned_cols=70  Identities=23%  Similarity=0.289  Sum_probs=46.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++++|+++|+|. |.+|+++++.|.+.|++|++.+++.....+ ....+   ....+..+  +....++|+++.+|.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~-~~~~~---g~~~v~~~--~l~~~~~Dv~vp~A~   94 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVAR-AAELF---GATVVAPE--EIYSVDADVFAPCAL   94 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHc---CCEEEcch--hhccccCCEEEeccc
Confidence            568889999996 789999999999999999988876432211 11111   12222221  111236999998764

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.45  E-value=0.0091  Score=59.47  Aligned_cols=74  Identities=18%  Similarity=0.194  Sum_probs=47.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-ccCCCCEEEEcccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-LLLEVDQIYHLACPA  191 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~D~Vih~Ag~~  191 (340)
                      ..++++++|+|+ |++|+.++..|++.|++|++++|+.+... .+...+..   ..+..+.... ...+.|+|||+....
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~-~la~~l~~---~~~~~~~~~~~~~~~~diiINtT~vG  450 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAK-ELADAVGG---QALTLADLENFHPEEGMILANTTSVG  450 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHhCC---ceeeHhHhhhhccccCeEEEecccCC
Confidence            456789999998 89999999999999999999988643222 22222211   1222221111 123578888877543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.45  E-value=0.022  Score=52.56  Aligned_cols=106  Identities=14%  Similarity=0.091  Sum_probs=68.6

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc---ccccc--CCCceEEee-CcccccccCCCCEEEEcccCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN---VMHHF--GNPNFELIR-HDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~---~~~~~--~~~~~~~~~-~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      |.|.|+ |.+|..++..|+.+|. +|+++|++++.....   +.+..  ......+.. .|  ...+.++|+||.++|..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d--~~~l~dADiVIit~g~p   77 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTND--YEDIAGSDVVVITAGIP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCC--HHHhCCCCEEEEecCCC
Confidence            468897 9999999999998876 999999975532211   11110  111223332 33  24578999999999853


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  ...+-.+.+..|+.-...+++...+...  .+|.+|
T Consensus        78 ~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          78 RK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            22  2233345667788888888888877763  455555

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.44  E-value=0.019  Score=53.76  Aligned_cols=97  Identities=18%  Similarity=0.213  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHh-CCCe---EEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIA-RGDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++|.|.||||++|..+++.|.+ ....   +..+..... ..+.+  .+....+.+...|.  ..+.++|+||.+++.
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~s-aGk~~--~~~~~~l~v~~~~~--~~~~~~Divf~a~~~   78 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRS-AGKTV--QFKGREIIIQEAKI--NSFEGVDIAFFSAGG   78 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECccc-CCCCe--eeCCcceEEEeCCH--HHhcCCCEEEECCCh
Confidence            446899999999999999998885 4555   555543211 11111  22222344444432  345789999987742


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                                        .-...+...+.+.|+.+|=.||..=+
T Consensus        79 ------------------~~s~~~~~~~~~~G~~VID~Ss~fR~  104 (347)
T PRK06728         79 ------------------EVSRQFVNQAVSSGAIVIDNTSEYRM  104 (347)
T ss_pred             ------------------HHHHHHHHHHHHCCCEEEECchhhcC
Confidence                              12334566666778788878876544

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.41  E-value=0.039  Score=48.82  Aligned_cols=102  Identities=13%  Similarity=0.146  Sum_probs=61.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~~  170 (340)
                      ++..+|+|.| .|.+|+++++.|++.|. +++++|...-....                      .+........++.+.
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            4556899999 69999999999999997 78887754211000                      000000012233333


Q ss_pred             Cccc----cccc-CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccc
Q 019470          171 HDVV----EPLL-LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV  233 (340)
Q Consensus       171 ~D~~----~~~~-~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v  233 (340)
                      ..+.    +..+ .++|+||.+..                 |...-..+.+.|++.++.||...+.+-
T Consensus        88 ~~i~~~~~~~l~~~~~D~VvdaiD-----------------~~~~k~~L~~~c~~~~ip~I~s~g~g~  138 (231)
T cd00755          88 EFLTPDNSEDLLGGDPDFVVDAID-----------------SIRAKVALIAYCRKRKIPVISSMGAGG  138 (231)
T ss_pred             eecCHhHHHHHhcCCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeCCcC
Confidence            3222    1222 35899998652                 233345678999999888887766543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.40  E-value=0.0041  Score=54.64  Aligned_cols=36  Identities=31%  Similarity=0.476  Sum_probs=32.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      |+|.|+||+|.+|..+++.|.+.|++|.+.+|+++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHH
Confidence            479999999999999999999999999999886543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.36  E-value=0.011  Score=49.18  Aligned_cols=73  Identities=18%  Similarity=0.219  Sum_probs=51.4

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEc
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .|.-.+.++++|+|.| .|-+|...++.|++.|++|++++..   ..+.+.. +  ..+.+......+..+.++|.||-+
T Consensus         5 ~P~~l~l~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp~---~~~~l~~-l--~~i~~~~~~~~~~dl~~a~lViaa   77 (157)
T PRK06719          5 YPLMFNLHNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSPE---ICKEMKE-L--PYITWKQKTFSNDDIKDAHLIYAA   77 (157)
T ss_pred             cceEEEcCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCc---cCHHHHh-c--cCcEEEecccChhcCCCceEEEEC
Confidence            4555678899999999 5999999999999999999998532   1122221 1  234455555555667788988864

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.35  E-value=0.024  Score=47.96  Aligned_cols=101  Identities=20%  Similarity=0.161  Sum_probs=59.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc---c--------------c----ccccccCCCceEEeeCcccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR---K--------------E----NVMHHFGNPNFELIRHDVVE  175 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~---~--------------~----~~~~~~~~~~~~~~~~D~~~  175 (340)
                      +|+|.| .|.+|.++++.|.+.|. +++++|...-..   .              +    .+.+.....+++.+...+..
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            588999 69999999999999998 688888753100   0              0    00000011233333333322


Q ss_pred             ----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CCeEEEEeCcccccC
Q 019470          176 ----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GARFLLTSTSEVYGD  236 (340)
Q Consensus       176 ----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~~~i~~SS~~v~g~  236 (340)
                          ..+.++|+||.+.                 -|...-..+.+.|.+. ++.||+.+...-|+.
T Consensus        80 ~~~~~~l~~~DlVi~~~-----------------d~~~~r~~i~~~~~~~~~ip~i~~~~~~~~~~  128 (174)
T cd01487          80 NNLEGLFGDCDIVVEAF-----------------DNAETKAMLAESLLGNKNKPVVCASGMAGFGD  128 (174)
T ss_pred             hhHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHHCCCCEEEEehhhccCC
Confidence                3456799999864                 1333334566777666 778887765544443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.29  E-value=0.028  Score=51.96  Aligned_cols=26  Identities=35%  Similarity=0.451  Sum_probs=23.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD  141 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~  141 (340)
                      +++|.|.||||-+|+.+++.|.++..
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            35899999999999999999999754

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.26  E-value=0.007  Score=55.47  Aligned_cols=70  Identities=17%  Similarity=0.180  Sum_probs=49.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ...+++++|+|. |.+|+.+++.|...|.+|++.+|+...... ..    ......+..+...+.+.++|+||++.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~----~~g~~~~~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR-IT----EMGLIPFPLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH----HCCCeeecHHHHHHHhccCCEEEECC
Confidence            567889999995 889999999999999999999986432111 11    11222333333345667899999975

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07411 hypothetical protein; Validated

Probab=96.25  E-value=0.014  Score=55.83  Aligned_cols=105  Identities=16%  Similarity=0.111  Sum_probs=65.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.| .|.+|.++++.|...|. +++++|...-....                      .+.+.-...+++.+
T Consensus        35 ~L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            45667999999 69999999999999997 77777654211000                      00000111234444


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ...+..    ..+.++|+||.+..                 |...-..+-++|.+.++.+|+.+..+-+|
T Consensus       114 ~~~~~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        114 ETRLSSENALDILAPYDVVVDGTD-----------------NFPTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             ecccCHHhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            444433    24567999998762                 33333446688888888888777655444

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.25  E-value=0.0088  Score=54.75  Aligned_cols=73  Identities=18%  Similarity=0.188  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccC--CCceEEeeCcccccccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG--NPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      .++++|+|.| +|+.|++++..|.+.|. +|++++|+...... +...+.  .....+...+.....+.++|+|||+.
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~-la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAA-LADELNARFPAARATAGSDLAAALAAADGLVHAT  200 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence            4567999999 58899999999999997 89999987543322 222211  11233333333334567899999984

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.24  E-value=0.012  Score=53.67  Aligned_cols=57  Identities=19%  Similarity=0.286  Sum_probs=44.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      .+.++++|+|.|++|.+|+.++..|+++|..|+++.+..    ..+                 ...+.++|+||++.|
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----~~L-----------------~~~~~~aDIvI~AtG  211 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----QNL-----------------PELVKQADIIVGAVG  211 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----hhH-----------------HHHhccCCEEEEccC
Confidence            467899999999999999999999999999998887621    111                 122357899999886

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.22  E-value=0.14  Score=49.95  Aligned_cols=121  Identities=13%  Similarity=0.029  Sum_probs=71.1

Q ss_pred             EEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCCCcCCh
Q 019470          121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNP  200 (340)
Q Consensus       121 VtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~  200 (340)
                      |+||+|.+|..+++.|...|.+|++..+.....     ....               ..+++.+++-+.      .....
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~-----~~~~---------------~~~~~~~~~d~~------~~~~~   96 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW-----AAGW---------------GDRFGALVFDAT------GITDP   96 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc-----ccCc---------------CCcccEEEEECC------CCCCH
Confidence            888899999999999999999999875532210     0000               113443333221      01122


Q ss_pred             hhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh--C
Q 019470          201 VKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA--G  278 (340)
Q Consensus       201 ~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--g  278 (340)
                      +.+... .......++.... +.+||+++|.....                   ....|+.+|+..+.+++.+++|.  +
T Consensus        97 ~~l~~~-~~~~~~~l~~l~~-~griv~i~s~~~~~-------------------~~~~~~~akaal~gl~rsla~E~~~g  155 (450)
T PRK08261         97 ADLKAL-YEFFHPVLRSLAP-CGRVVVLGRPPEAA-------------------ADPAAAAAQRALEGFTRSLGKELRRG  155 (450)
T ss_pred             HHHHHH-HHHHHHHHHhccC-CCEEEEEccccccC-------------------CchHHHHHHHHHHHHHHHHHHHhhcC
Confidence            221111 1112222222222 23899999865321                   01359999999999999998874  7


Q ss_pred             CcEEEEEeCc
Q 019470          279 VEVRIARIFN  288 (340)
Q Consensus       279 i~~~ivRp~~  288 (340)
                      ++++.+.|+.
T Consensus       156 i~v~~i~~~~  165 (450)
T PRK08261        156 ATAQLVYVAP  165 (450)
T ss_pred             CEEEEEecCC
Confidence            8888887764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.20  E-value=0.0072  Score=63.37  Aligned_cols=157  Identities=18%  Similarity=0.186  Sum_probs=98.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCcc-ccccccc---CCCceEEeeCccccc-----------cc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRK-ENVMHHF---GNPNFELIRHDVVEP-----------LL  178 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~-~~~~~~~---~~~~~~~~~~D~~~~-----------~~  178 (340)
                      ..|.++|+||-|+.|.+|+.-|.+||.+-.++ .|+.-... ..+.-..   ....+.+-..|++..           .+
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence            45789999999999999999999999965555 44321111 1111111   112333333444332           23


Q ss_pred             CCCCEEEEcccCCCCCCCcC----ChhhHHHHHHHHHHHHHHHHHHcCC---eEEEEeCcc-cccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYKF----NPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~~----~~~~~~~~Nv~g~~~ll~~a~~~~~---~~i~~SS~~-v~g~~~~~~~~E~~~~~~  250 (340)
                      ..+--|||+|..-.+.-.++    +..+.-+.-+.||.|+=+..++.-.   .||..||.+ --|+.++           
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ----------- 1915 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ----------- 1915 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc-----------
Confidence            34678899888655443332    3444555567788888777777642   688888854 3333332           


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCce
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT  289 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i  289 (340)
                            ++||.+-...|+++++-. ..|++-+.|-=|.|
T Consensus      1916 ------tNYG~aNS~MERiceqRr-~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1916 ------TNYGLANSAMERICEQRR-HEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ------cccchhhHHHHHHHHHhh-hcCCCcceeeeecc
Confidence                  789999999999987753 34777666665543

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.19  E-value=0.051  Score=49.14  Aligned_cols=36  Identities=28%  Similarity=0.302  Sum_probs=30.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      .++..+|+|.| .|.+|.++++.|++.|. +++++|..
T Consensus        27 kL~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            34666899999 69999999999999995 88888764

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.19  E-value=0.039  Score=51.96  Aligned_cols=93  Identities=20%  Similarity=0.200  Sum_probs=55.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHH-hCCCe---EEEEeCCCCCcccccccccCCCceEEeeCcccc-cccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLI-ARGDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-PLLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll-~~G~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~D~Vih~Ag~~  191 (340)
                      ++|.|.||||-+|+.+++.|. ++...   ++.+.-.....+   ...+......+.  ++.+ ..+.++|+++.++|- 
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~---~~~f~~~~~~v~--~~~~~~~~~~vDivffa~g~-   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQA---APSFGGTTGTLQ--DAFDIDALKALDIIITCQGG-   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCC---cCCCCCCcceEE--cCcccccccCCCEEEEcCCH-
Confidence            479999999999999999999 55553   444433211111   111222222333  3333 256789999998862 


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcc
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSE  232 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~  232 (340)
                                       ..+..+...+.++|.  .+|=-||..
T Consensus        75 -----------------~~s~~~~p~~~~aG~~~~VIDnSSa~  100 (366)
T TIGR01745        75 -----------------DYTNEIYPKLRESGWQGYWIDAASSL  100 (366)
T ss_pred             -----------------HHHHHHHHHHHhCCCCeEEEECChhh
Confidence                             134567777888884  455444443

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.18  E-value=0.052  Score=53.47  Aligned_cols=76  Identities=24%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++++|+|.|+ |++|..+++.|.++|++|+++++............+...++++...+... ...++|.||...|.
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi   88 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGW   88 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCc
Confidence            346779999995 88999999999999999999987543222222222333355555444332 34568999988875

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.16  E-value=0.056  Score=42.62  Aligned_cols=29  Identities=24%  Similarity=0.579  Sum_probs=25.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhC-CCeEEEE
Q 019470          118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVV  146 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l  146 (340)
                      ++.|+|++|.+|..+++.|.+. +.++.++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av   30 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVAL   30 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEE
Confidence            4789999999999999999995 7788877

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.14  E-value=0.022  Score=55.80  Aligned_cols=75  Identities=19%  Similarity=0.206  Sum_probs=51.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+++|+|.| .|..|..+++.|.++|++|.+.|+............+...++.+...+.....+.++|.||...|+
T Consensus        13 ~~~~i~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi   87 (458)
T PRK01710         13 KNKKVAVVG-IGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM   87 (458)
T ss_pred             cCCeEEEEc-ccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence            456899999 688999999999999999999997643221111111222345565554434445779999998765

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.11  E-value=0.044  Score=50.67  Aligned_cols=82  Identities=18%  Similarity=0.228  Sum_probs=52.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~  194 (340)
                      +.+|.|.||||++|..|++.|.++.+ ++..+..+...              +.   +..+..+.++|+||-+...    
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~---~~~~~~~~~~DvvFlalp~----   60 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DA---AARRELLNAADVAILCLPD----   60 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cc---cCchhhhcCCCEEEECCCH----
Confidence            45899999999999999998888864 55555432111              00   1122334578999976531    


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                    .-...++..+.+.|+++|=.|+..
T Consensus        61 --------------~~s~~~~~~~~~~g~~VIDlSadf   84 (313)
T PRK11863         61 --------------DAAREAVALIDNPATRVIDASTAH   84 (313)
T ss_pred             --------------HHHHHHHHHHHhCCCEEEECChhh
Confidence                          113344555556778888888754

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.04  E-value=0.0066  Score=56.70  Aligned_cols=73  Identities=23%  Similarity=0.211  Sum_probs=48.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc---c--CCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL---L--LEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~--~~~D~Vih~Ag  189 (340)
                      +.+|||+||+|.+|...++-+...|+.++++..+..+.. .+.......-+++.+.|+.++.   .  .++|+|+...|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            779999999999999999988888976666655432222 2222222233445555554432   2  25999999876

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.01  E-value=0.03  Score=51.91  Aligned_cols=67  Identities=16%  Similarity=0.203  Sum_probs=48.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ...+++|.|.| .|-||+.+++.|...|.+|++.++...... .        ...+...+..++.+.++|+|+.+..
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~-~--------~~~~~~~~~l~e~l~~aDvvv~~lP  199 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP-G--------VQSFAGREELSAFLSQTRVLINLLP  199 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC-C--------ceeecccccHHHHHhcCCEEEECCC
Confidence            46788999999 899999999999999999999987432210 0        0011223445667788999997763

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.01  E-value=0.01  Score=54.19  Aligned_cols=75  Identities=13%  Similarity=0.030  Sum_probs=47.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCC-CceEEeeC-cccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGN-PNFELIRH-DVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~-D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .++++++|.| +|..|+.++..|.+.|. +|+++.|+.+... .+...+.. ..+..+.. +.....+.++|+|||+...
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~-~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLS-RLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            4677999999 59999999999999997 7999998754332 22222211 11111111 1122344679999998654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.00  E-value=0.012  Score=56.12  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      ..++|.|.||.|.+|..+++.|.+.|++|++.++.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            44689999999999999999999999999999974

>TIGR01408 Ube1 ubiquitin-activating enzyme E1

Probab=95.97  E-value=0.019  Score=61.10  Aligned_cols=104  Identities=12%  Similarity=0.096  Sum_probs=70.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~~  170 (340)
                      +...+|||.|. |++|.++++.|...|. +|+++|...-...                      +.+.+.-....++...
T Consensus        22 L~~s~VLIiG~-gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~  100 (1008)
T TIGR01408        22 MAKSNVLISGM-GGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSSS  100 (1008)
T ss_pred             HhhCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEec
Confidence            45568999995 7799999999999998 7777775421100                      0111111123455666


Q ss_pred             CcccccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC--CeEEEEeCccccc
Q 019470          171 HDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYG  235 (340)
Q Consensus       171 ~D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~--~~~i~~SS~~v~g  235 (340)
                      .++.+..+.++|+||.+-                 .+......+-++|++.+  +.||+.++.+.||
T Consensus       101 ~~l~~e~l~~fdvVV~t~-----------------~~~~~~~~in~~cr~~~~~I~fI~~~~~G~~G  150 (1008)
T TIGR01408       101 VPFNEEFLDKFQCVVLTE-----------------MSLPLQKEINDFCHSQCPPIAFISADVRGLFG  150 (1008)
T ss_pred             ccCCHHHHcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCeEEEEEeecceEE
Confidence            566666778899999753                 23344456779999999  6899988877776

This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.95  E-value=0.059  Score=53.29  Aligned_cols=167  Identities=18%  Similarity=0.248  Sum_probs=97.4

Q ss_pred             CCCCCCCCeEEEEcCc-hHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc------CCCceEEeeCcccc-------
Q 019470          110 LGLKRKGLRIVVTGGA-GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF------GNPNFELIRHDVVE-------  175 (340)
Q Consensus       110 ~~~~~~~~~vlVtGat-G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~------~~~~~~~~~~D~~~-------  175 (340)
                      .+.....+.++||||+ |-||..++..|++-|.+|++..-+...........+      ....+-++..++..       
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            3445567889999986 679999999999999999988654332221111100      01112222222211       


Q ss_pred             -------------------cccCCCCEEEEcccCCCCCCCcC-C--hhhHHHHHHHHHHHHHHHHHHcC----C----eE
Q 019470          176 -------------------PLLLEVDQIYHLACPASPVHYKF-N--PVKTIKTNVVGTLNMLGLAKRVG----A----RF  225 (340)
Q Consensus       176 -------------------~~~~~~D~Vih~Ag~~~~~~~~~-~--~~~~~~~Nv~g~~~ll~~a~~~~----~----~~  225 (340)
                                         ......|.+|-+|++.......+ .  -+..+++-+....+++-..++.+    +    ++
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence                               01123688898888643332111 2  23345555566667766665543    2    56


Q ss_pred             EEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh----CCcEEEEEeCceeCCC
Q 019470          226 LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA----GVEVRIARIFNTYGPR  293 (340)
Q Consensus       226 i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~----gi~~~ivRp~~i~G~~  293 (340)
                      |+..|-.      .           -.++....|+.+|...+.++.++..+.    .+.++-.++|.+-|-+
T Consensus       550 VLPgSPN------r-----------G~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         550 VLPGSPN------R-----------GMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG  604 (866)
T ss_pred             EecCCCC------C-----------CccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence            6666521      0           112223679999999999998887654    3556666777766654

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.93  E-value=0.019  Score=55.84  Aligned_cols=66  Identities=23%  Similarity=0.228  Sum_probs=44.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|.||+|.+|..+++.|.+.|++|++++|+.+...+ ....   .++..  .+...+.+.++|+||-+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~-~a~~---~gv~~--~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE-VAKE---LGVEY--ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH-HHHH---cCCee--ccCHHHHhccCCEEEEec
Confidence            489999999999999999999999999999986433211 1111   11211  112223456789999765

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.91  E-value=0.042  Score=53.09  Aligned_cols=36  Identities=28%  Similarity=0.277  Sum_probs=32.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      +++|.|.| .|++|..++..|+++|++|+++++++..
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~   38 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHA   38 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHH
Confidence            57899998 7999999999999999999999987543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.89  E-value=0.0047  Score=52.42  Aligned_cols=68  Identities=21%  Similarity=0.183  Sum_probs=46.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ...+++|.|.| .|-||+.+++.|..-|.+|++.+|....... .    ....+   ..+..++.+.++|+|+.+.-
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~----~~~~~---~~~~l~ell~~aDiv~~~~p  100 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEG-A----DEFGV---EYVSLDELLAQADIVSLHLP  100 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHH-H----HHTTE---EESSHHHHHHH-SEEEE-SS
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhh-c----ccccc---eeeehhhhcchhhhhhhhhc
Confidence            67889999999 7999999999999999999999996543220 0    01122   22334456778999997664

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.86  E-value=0.0068  Score=50.62  Aligned_cols=65  Identities=18%  Similarity=0.116  Sum_probs=44.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |++|.+.| .|-+|..+++.|+++|++|++.+|+++...+...     ..  ....+...+...++|+|+-+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-----~g--~~~~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-----AG--AEVADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-----TT--EEEESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-----hh--hhhhhhhhhHhhcccceEeec
Confidence            56899999 6999999999999999999999986433222111     12  334444555667789999765

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.84  E-value=0.072  Score=49.12  Aligned_cols=95  Identities=14%  Similarity=0.100  Sum_probs=61.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      ++|.| ||||-+|+.+.+.|.+++.   +++.+..........+  .+.  +-++...++.+..+.++|+++. +|.   
T Consensus         4 ~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i--~f~--g~~~~V~~l~~~~f~~vDia~f-ag~---   74 (322)
T PRK06901          4 LNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGI--RFN--NKAVEQIAPEEVEWADFNYVFF-AGK---   74 (322)
T ss_pred             ceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEE--EEC--CEEEEEEECCccCcccCCEEEE-cCH---
Confidence            47999 9999999999999998887   4555543211111111  122  2244444555667789999998 752   


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                                     .........+.+.|+.+|=-||..-+.
T Consensus        75 ---------------~~s~~~ap~a~~aG~~VIDnSsa~Rmd  101 (322)
T PRK06901         75 ---------------MAQAEHLAQAAEAGCIVIDLYGICAAL  101 (322)
T ss_pred             ---------------HHHHHHHHHHHHCCCEEEECChHhhCC
Confidence                           123456667788888888888766444

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.83  E-value=0.023  Score=51.74  Aligned_cols=58  Identities=21%  Similarity=0.278  Sum_probs=46.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.++++++|+|.++.+|+.++..|+++|..|+++.+..                     +-....+.++|+||...|.
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEECCCC
Confidence            367899999999999999999999999999999987631                     0122345678999988874

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.80  E-value=0.016  Score=53.44  Aligned_cols=70  Identities=19%  Similarity=0.178  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ...+++++|+|. |.+|..+++.|.+.|.+|++.+|+..... .. ..   ..++.+..+...+.+.++|+||++.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~-~~-~~---~G~~~~~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA-RI-TE---MGLSPFHLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH-HH-HH---cCCeeecHHHHHHHhCCCCEEEECC
Confidence            346789999995 88999999999999999999999743211 11 11   1233333333445567899999975

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.79  E-value=0.015  Score=61.79  Aligned_cols=72  Identities=24%  Similarity=0.315  Sum_probs=45.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC-Ce-------------EEEEeCCCCCcccccccccCCCceEEeeCcccc----
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DS-------------VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE----  175 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~-------------V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~----  175 (340)
                      .++++|+|.|+ |++|+.+++.|.+.+ .+             |.+.++...... .+....  .+++.+..|..+    
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~-~la~~~--~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK-ETVEGI--ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH-HHHHhc--CCCceEEeecCCHHHH
Confidence            35779999995 999999999998763 23             666666533222 121111  134445554433    


Q ss_pred             -cccCCCCEEEEccc
Q 019470          176 -PLLLEVDQIYHLAC  189 (340)
Q Consensus       176 -~~~~~~D~Vih~Ag  189 (340)
                       ..+.++|+||++..
T Consensus       643 ~~~v~~~DaVIsalP  657 (1042)
T PLN02819        643 LKYVSQVDVVISLLP  657 (1042)
T ss_pred             HHhhcCCCEEEECCC
Confidence             33467999999875

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.78  E-value=0.11  Score=46.26  Aligned_cols=35  Identities=17%  Similarity=0.292  Sum_probs=27.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-CeE-EEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSV-IVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V-~~l~r~~  150 (340)
                      +++|.|.|++|-+|+.|++.+.+.. .++ -+++|..
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            5799999999999999999999886 344 3455543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.76  E-value=0.035  Score=51.84  Aligned_cols=37  Identities=22%  Similarity=0.220  Sum_probs=32.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..+.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~  186 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD  186 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3567999999999999999998888899999888754

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.75  E-value=0.059  Score=52.54  Aligned_cols=71  Identities=23%  Similarity=0.294  Sum_probs=50.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~  187 (340)
                      ..+++++|.|+ |.+|..+++.|.+.|++|++++++++... .+...  ...+.++.+|..++      .+.++|.||-+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~-~~~~~--~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~  304 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAE-ELAEE--LPNTLVLHGDGTDQELLEEEGIDEADAFIAL  304 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHHH--CCCCeEEECCCCCHHHHHhcCCccCCEEEEC
Confidence            45678999996 99999999999999999999998654222 11111  13456788887654      34578988854


Q ss_pred             c
Q 019470          188 A  188 (340)
Q Consensus       188 A  188 (340)
                      .
T Consensus       305 ~  305 (453)
T PRK09496        305 T  305 (453)
T ss_pred             C
Confidence            4

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.73  E-value=0.05  Score=53.05  Aligned_cols=67  Identities=18%  Similarity=0.319  Sum_probs=48.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----c-cCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----L-LLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~-~~~~D~Vih~A  188 (340)
                      |+|+|+|+ |.+|.++++.|.++|++|+++++++..... ..   ....++++.+|..++     . +.++|.||-+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~-~~---~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRR-LQ---DRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HH---hhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            47999996 999999999999999999999985443211 11   113567777777553     2 56789988764

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.73  E-value=0.087  Score=46.23  Aligned_cols=78  Identities=14%  Similarity=0.248  Sum_probs=56.8

Q ss_pred             CCCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEE
Q 019470          107 KIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       107 ~~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      .+|.....++++|||.|| |-++..=++.|++.|.+|+++.-...   +.+........+.+..-+.....+.+++.||-
T Consensus        16 ~~pi~l~~~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~---~el~~l~~~~~i~~~~r~~~~~dl~g~~LVia   91 (223)
T PRK05562         16 YMFISLLSNKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFS---KEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVI   91 (223)
T ss_pred             EeeeEEECCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCC---HHHHHHHhCCCEEEEeCCCChHHhCCCcEEEE
Confidence            455566778899999995 88998888999999999999975322   22222233456788887777677888988885


Q ss_pred             cc
Q 019470          187 LA  188 (340)
Q Consensus       187 ~A  188 (340)
                      +.
T Consensus        92 AT   93 (223)
T PRK05562         92 AT   93 (223)
T ss_pred             CC
Confidence            43

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.69  E-value=0.014  Score=54.91  Aligned_cols=76  Identities=22%  Similarity=0.204  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccc----cCCCCEEEEc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----LLEVDQIYHL  187 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~D~Vih~  187 (340)
                      -.+++.|||.||+|.+|.+.++-+...| ..|++....  ...+.....-...-+++.+.|..+..    ..++|+|+.|
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~--e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~  232 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK--EKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDC  232 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc--chHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEEC
Confidence            3467899999999999999998888888 455554432  11222222212233555555554433    3369999999


Q ss_pred             ccC
Q 019470          188 ACP  190 (340)
Q Consensus       188 Ag~  190 (340)
                      .|-
T Consensus       233 vg~  235 (347)
T KOG1198|consen  233 VGG  235 (347)
T ss_pred             CCC
Confidence            974

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.66  E-value=0.035  Score=52.00  Aligned_cols=67  Identities=19%  Similarity=0.146  Sum_probs=48.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ..+.+++|.|.| .|.||+.+++.|...|.+|++.+|......   ...   ..+.   .+..++.+.++|+|+.+.
T Consensus       146 ~~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~---~~~~---~~~l~ell~~aDiV~l~l  212 (333)
T PRK13243        146 YDVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEA---EKE---LGAE---YRPLEELLRESDFVSLHV  212 (333)
T ss_pred             cCCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhh---HHH---cCCE---ecCHHHHHhhCCEEEEeC
Confidence            467899999999 699999999999999999999998543211   101   1112   123445677899999765

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.63  E-value=0.021  Score=52.80  Aligned_cols=34  Identities=21%  Similarity=0.486  Sum_probs=28.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      ++||.|.||+|+-|.+|++.|.++.+ +++.++-+
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~   36 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSR   36 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeech
Confidence            56999999999999999999999854 76665543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.62  E-value=0.11  Score=50.75  Aligned_cols=74  Identities=15%  Similarity=0.085  Sum_probs=50.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-ccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.+++|+|+|+ |..|..+++.|.++|++|.+.+...... ...+..  ...++.+..+...+..+.++|.||...|+
T Consensus         3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~--~~~gi~~~~g~~~~~~~~~~d~vv~spgi   77 (445)
T PRK04308          3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPERVAQIGK--MFDGLVFYTGRLKDALDNGFDILALSPGI   77 (445)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhh--ccCCcEEEeCCCCHHHHhCCCEEEECCCC
Confidence            45679999996 6899999999999999999998754321 111111  01245555544333344679999998876

>PRK07574 formate dehydrogenase; Provisional

Probab=95.57  E-value=0.033  Score=53.08  Aligned_cols=70  Identities=19%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..+.+|+|.|.| .|-||+.+++.|...|.+|++.+|.....  .....   ..  +...+..++.+.++|+|+.+..
T Consensus       188 ~~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~--~~~~~---~g--~~~~~~l~ell~~aDvV~l~lP  257 (385)
T PRK07574        188 YDLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPE--EVEQE---LG--LTYHVSFDSLVSVCDVVTIHCP  257 (385)
T ss_pred             eecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCch--hhHhh---cC--ceecCCHHHHhhcCCEEEEcCC
Confidence            457889999999 69999999999999999999999864221  11111   11  1122335566788999987653

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=95.55  E-value=0.06  Score=51.95  Aligned_cols=101  Identities=16%  Similarity=0.187  Sum_probs=63.5

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC------eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD------SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~------~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      +|+|.| .|.||.++++.|+..|.      +++++|...-....                      .+...-...+++..
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~   79 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL   79 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence            588999 79999999999999987      78888764211100                      00000011133333


Q ss_pred             eCccc--------ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          170 RHDVV--------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       170 ~~D~~--------~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      ...+.        +..+.+.|+||++.                 -|+..-..+-+.|...++.+|..++.+.+|.
T Consensus        80 ~~~v~~~~~~~~~~~f~~~~DvVi~al-----------------Dn~~aR~~vn~~C~~~~iPli~~gt~G~~G~  137 (435)
T cd01490          80 QNRVGPETEHIFNDEFWEKLDGVANAL-----------------DNVDARMYVDRRCVYYRKPLLESGTLGTKGN  137 (435)
T ss_pred             ecccChhhhhhhhHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHhCCCEEEEecccceeE
Confidence            33221        12345688888754                 3556666788899999888888887766653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.55  E-value=0.19  Score=45.69  Aligned_cols=71  Identities=20%  Similarity=0.256  Sum_probs=42.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +++++|.|.| .|.||..+++.|.+.  +++|.++....+...+.....+...  .  ..+..++.+.++|+|+-++.
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~--~--~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRP--P--PVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCC--c--ccCCHHHHhcCCCEEEECCC
Confidence            3457999999 799999999999874  6787755432222222221111100  1  11223344567899998875

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.54  E-value=0.06  Score=49.32  Aligned_cols=36  Identities=22%  Similarity=0.255  Sum_probs=32.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      .++|.|.|+ |.+|..|+..|+..|++|++.+++++.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~   40 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEEL   40 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            358999995 999999999999999999999997654

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.51  E-value=0.022  Score=54.88  Aligned_cols=75  Identities=13%  Similarity=0.193  Sum_probs=52.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      +..+++|+|.|+ |.+|+.+++.|.+.|. +|++..|+.... +.+...+..  ...+..|.....+.++|+||++.+..
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra-~~La~~~~~--~~~~~~~~l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKA-QKITSAFRN--ASAHYLSELPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHhcC--CeEecHHHHHHHhccCCEEEECcCCC
Confidence            356789999995 9999999999999996 788888864332 333322211  23444444455677899999988753

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.47  E-value=0.081  Score=48.72  Aligned_cols=80  Identities=18%  Similarity=0.193  Sum_probs=50.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHY  196 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~~  196 (340)
                      +|.|.||+||.|.+|++.|.+..+ ++..+.-...              ++  ..| .+..+.++|+||.+...      
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~--~~~-~~~~~~~~D~vFlalp~------   59 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KD--AAE-RAKLLNAADVAILCLPD------   59 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cC--cCC-HhHhhcCCCEEEECCCH------
Confidence            799999999999999999998854 5655542111              00  001 12334678999976531      


Q ss_pred             cCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          197 KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       197 ~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                  .....++..+.+.|+++|=.|+..
T Consensus        60 ------------~~s~~~~~~~~~~g~~VIDlSadf   83 (310)
T TIGR01851        60 ------------DAAREAVSLVDNPNTCIIDASTAY   83 (310)
T ss_pred             ------------HHHHHHHHHHHhCCCEEEECChHH
Confidence                        112344555556777888888754

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.44  E-value=0.078  Score=50.10  Aligned_cols=94  Identities=18%  Similarity=0.181  Sum_probs=54.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-CCe---EEEEeCCCCCcccccccccCCCceEEeeCccc-ccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDS---VIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~---V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~D~Vih~Ag~  190 (340)
                      |++|.|.||||++|..|++.|+++ ...   +..+.........   ..+......+.  +.. ...+.++|+||.+++.
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~---~~f~g~~~~v~--~~~~~~~~~~~Divf~a~~~   75 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAA---PSFGGKEGTLQ--DAFDIDALKKLDIIITCQGG   75 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcc---cccCCCcceEE--ecCChhHhcCCCEEEECCCH
Confidence            368999999999999999966665 444   5555443211111   11222222222  222 2345689999988752


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe--EEEEeCcc
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTSE  232 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~--~i~~SS~~  232 (340)
                                        .-...+...+.+.|.+  +|=.||..
T Consensus        76 ------------------~~s~~~~~~~~~aG~~~~VID~Ss~f  101 (369)
T PRK06598         76 ------------------DYTNEVYPKLRAAGWQGYWIDAASTL  101 (369)
T ss_pred             ------------------HHHHHHHHHHHhCCCCeEEEECChHH
Confidence                              1234556666677854  56555544

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.43  E-value=0.034  Score=50.93  Aligned_cols=59  Identities=25%  Similarity=0.224  Sum_probs=46.6

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..+.+||+|.|.|.+|.+|..++..|+++|+.|++..+...                    + ..+...++|+||-+.|.
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------------~-l~e~~~~ADIVIsavg~  212 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------------D-AKALCRQADIVVAAVGR  212 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------------C-HHHHHhcCCEEEEecCC
Confidence            34778999999999999999999999999999999876421                    1 12234568999987763

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.42  E-value=0.052  Score=53.01  Aligned_cols=71  Identities=20%  Similarity=0.261  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcC----------------chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc
Q 019470          113 KRKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP  176 (340)
Q Consensus       113 ~~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~  176 (340)
                      +++|++||||+|                ||-.|.+|++++..+|++|+.+.-..  .   +.   ....++++..+...+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~--~---~~---~p~~v~~i~V~ta~e  324 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV--D---LA---DPQGVKVIHVESARQ  324 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc--C---CC---CCCCceEEEecCHHH
Confidence            479999999954                79999999999999999999986311  1   10   112345555444332


Q ss_pred             ------ccCCCCEEEEcccCC
Q 019470          177 ------LLLEVDQIYHLACPA  191 (340)
Q Consensus       177 ------~~~~~D~Vih~Ag~~  191 (340)
                            ...+.|++|++|++.
T Consensus       325 M~~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        325 MLAAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHHHhhCCCCEEEEecccc
Confidence                  112479999999974

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.40  E-value=0.33  Score=38.03  Aligned_cols=84  Identities=18%  Similarity=0.179  Sum_probs=48.6

Q ss_pred             CeEEEEcCc---hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGA---GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      |+|.|.|++   +-.|..+.+.|.++|++|+.+.-..    ....      +.. .-.++.+ .-..+|.++.+.     
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~----~~i~------G~~-~y~sl~e-~p~~iDlavv~~-----   63 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG----GEIL------GIK-CYPSLAE-IPEPIDLAVVCV-----   63 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTC----SEET------TEE--BSSGGG-CSST-SEEEE-S-----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCc----eEEC------cEE-eeccccC-CCCCCCEEEEEc-----
Confidence            479999988   6689999999999999999985421    1110      111 1112222 235688888754     


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeC
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS  230 (340)
                                   +-.-+..+++.|.+.|+ .+++.++
T Consensus        64 -------------~~~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   64 -------------PPDKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             --------------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             -------------CHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                         33445678888888888 5666664

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=95.38  E-value=0.13  Score=46.51  Aligned_cols=32  Identities=25%  Similarity=0.508  Sum_probs=26.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN  148 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r  148 (340)
                      ++|.|.|++|.+|+.+++.+.+. +.++.++..
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            58999999999999999999875 677776543

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=95.36  E-value=0.077  Score=51.38  Aligned_cols=75  Identities=19%  Similarity=0.118  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      .+|+|+|.| -|--|..+++.|.++|++|++.|.++........ ......+++..+.........+|.||-+-|+.
T Consensus         6 ~~~kv~V~G-LG~sG~a~a~~L~~~G~~v~v~D~~~~~~~~~~~-~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~   80 (448)
T COG0771           6 QGKKVLVLG-LGKSGLAAARFLLKLGAEVTVSDDRPAPEGLAAQ-PLLLEGIEVELGSHDDEDLAEFDLVVKSPGIP   80 (448)
T ss_pred             cCCEEEEEe-cccccHHHHHHHHHCCCeEEEEcCCCCccchhhh-hhhccCceeecCccchhccccCCEEEECCCCC
Confidence            478999999 7888999999999999999999976544211111 22234556666555446677899999988763

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=95.36  E-value=0.069  Score=51.61  Aligned_cols=105  Identities=10%  Similarity=0.122  Sum_probs=63.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~~  170 (340)
                      ++..+|+|.|+ |.+|.++++.|+..|. +++++|...-....                      .+.+.-....++.+.
T Consensus        18 L~~s~VlliG~-gglGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~   96 (425)
T cd01493          18 LESAHVCLLNA-TATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVE   96 (425)
T ss_pred             HhhCeEEEEcC-cHHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEe
Confidence            34558999985 5599999999999998 78888754211000                      011110112334443


Q ss_pred             Cccc------ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          171 HDVV------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       171 ~D~~------~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      .+..      ...+.+.|+||.+-.                 +......+.+.|.+.++.+|+++|.+.||.
T Consensus        97 e~~~~ll~~~~~f~~~fdiVI~t~~-----------------~~~~~~~L~~~c~~~~iPlI~~~s~G~~G~  151 (425)
T cd01493          97 ESPEALLDNDPSFFSQFTVVIATNL-----------------PESTLLRLADVLWSANIPLLYVRSYGLYGY  151 (425)
T ss_pred             cccchhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEecccCEEE
Confidence            3321      123456788874321                 122233477889999999999999988873

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PRK07877 hypothetical protein; Provisional

Probab=95.31  E-value=0.058  Score=55.47  Aligned_cols=100  Identities=17%  Similarity=0.134  Sum_probs=64.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCc--cc-------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGR--KE-------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~--~~-------------------~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.|. | +|++++..|...|.  +++++|...-..  -.                   .+...-...+++.+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~  181 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF  181 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence            456779999999 7 99999999999994  788877642110  00                   00000011244555


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~  231 (340)
                      ...+..    ..+.++|+||.+.                 -|+..-..+.++|.+.++-+|+-++.
T Consensus       182 ~~~i~~~n~~~~l~~~DlVvD~~-----------------D~~~~R~~ln~~a~~~~iP~i~~~~~  230 (722)
T PRK07877        182 TDGLTEDNVDAFLDGLDVVVEEC-----------------DSLDVKVLLREAARARRIPVLMATSD  230 (722)
T ss_pred             eccCCHHHHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence            544432    3456799999876                 24444445678999999888887753

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.28  E-value=0.075  Score=48.66  Aligned_cols=34  Identities=26%  Similarity=0.303  Sum_probs=30.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++|.|.| +|.+|..++..|++.|++|++++++.+
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~   37 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDE   37 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHH
Confidence            5899998 599999999999999999999998754

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.24  E-value=0.11  Score=50.13  Aligned_cols=34  Identities=35%  Similarity=0.427  Sum_probs=30.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      |+|.|.| .|++|..++..|++.|++|++++++..
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~   34 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQE   34 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHH
Confidence            4788998 799999999999999999999998654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.24  E-value=0.027  Score=54.43  Aligned_cols=72  Identities=18%  Similarity=0.435  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..+++|+|.|+ |.+|..+++.|...| .+|++++|+..... .+...+..   ..+..+.....+.++|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~-~la~~~g~---~~i~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAE-DLAKELGG---EAVKFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHcCC---eEeeHHHHHHHHhhCCEEEECCCC
Confidence            56789999995 999999999999999 68999998654322 12222211   223333334556789999998653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.23  E-value=0.2  Score=45.38  Aligned_cols=67  Identities=18%  Similarity=0.269  Sum_probs=39.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC--CeEEE-EeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIV-VDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +++|.|.| .|.||..+++.|.+.+  .++.+ ++++.+. .+.....   .....  .+..++.+.++|+|+.++.
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~-a~~~a~~---~~~~~--~~~~~ell~~~DvVvi~a~   70 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEK-AENLASK---TGAKA--CLSIDELVEDVDLVVECAS   70 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHH-HHHHHHh---cCCee--ECCHHHHhcCCCEEEEcCC
Confidence            36899999 6999999999998864  56554 4443221 1111111   11111  1222334468999999874

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=95.22  E-value=0.048  Score=51.14  Aligned_cols=102  Identities=14%  Similarity=0.041  Sum_probs=65.6

Q ss_pred             cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          176 PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       176 ~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +.+.+++.+|.+-|....... ........+..+-...+++...    +.+ +++|.++|...                 
T Consensus       199 P~l~~i~t~is~LGsts~~a~-~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~-----------------  260 (410)
T PF08732_consen  199 PSLDDIKTMISTLGSTSAQAK-SSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNN-----------------  260 (410)
T ss_pred             CchhhhhhheecCCCChhhcc-ccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCc-----------------
Confidence            345578899998886542221 1111222344455555666655    444 48998888642                 


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC  295 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~  295 (340)
                      .......+|..+|...|.-+...-...--.++|+|||.+.|.++.
T Consensus       261 ~~~s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  261 NAISSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             chhhhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence            122334689999999999987664432347999999999998765

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.20  E-value=0.025  Score=51.67  Aligned_cols=99  Identities=18%  Similarity=0.195  Sum_probs=60.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEe-eCcccccccCCCCEEEEcccCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI-RHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      .++.+.|+|+.| ||.-=++-..+-|++|+++++....+.+.....-...-++.. +.|..+....--|.++|++-... 
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a-  258 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLA-  258 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeecc-
Confidence            678999999988 987777766667999999999765554444322222334444 55666555444555555442100 


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                      .           .+   ...++.+++..| ++|+++-
T Consensus       259 ~-----------~~---~~~~~~~lk~~G-t~V~vg~  280 (360)
T KOG0023|consen  259 E-----------HA---LEPLLGLLKVNG-TLVLVGL  280 (360)
T ss_pred             c-----------cc---hHHHHHHhhcCC-EEEEEeC
Confidence            0           11   123455666555 7888874

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.19  E-value=0.12  Score=50.89  Aligned_cols=73  Identities=21%  Similarity=0.188  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ...+++|+|.| .|..|..+++.|+++|++|.+.|+...... .+   +...++.+...+-....+.++|.||...|+
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~-~~---l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi   84 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETARH-KL---IEVTGVADISTAEASDQLDSFSLVVTSPGW   84 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHHH-HH---HHhcCcEEEeCCCchhHhcCCCEEEeCCCC
Confidence            45667899999 788999999999999999999997533221 11   111244554443222345678999998875

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.17  E-value=0.071  Score=43.31  Aligned_cols=57  Identities=21%  Similarity=0.266  Sum_probs=45.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++++|+|.|.+.-+|..++..|.++|..|+.+.+...                    | .++...++|+||-..|.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~--------------------~-l~~~v~~ADIVvsAtg~   81 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI--------------------Q-LQSKVHDADVVVVGSPK   81 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc--------------------C-HHHHHhhCCEEEEecCC
Confidence            678999999999999999999999999999999875321                    1 12245678888877763

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.08  E-value=0.14  Score=48.12  Aligned_cols=97  Identities=15%  Similarity=0.171  Sum_probs=56.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCC-------------CceEEeeCcccccccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGN-------------PNFELIRHDVVEPLLLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~~  181 (340)
                      +++|.|.|. |-||+.+++.+.++ +.+|.++..........+......             ....+...+..+..+.++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v   79 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA   79 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence            358999998 99999999988876 457777764322111111000000             000111122233345679


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCc
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~  231 (340)
                      |+||.+.+..                  .....++.+.++|+++|+-++.
T Consensus        80 DVVIdaT~~~------------------~~~e~a~~~~~aGk~VI~~~~~  111 (341)
T PRK04207         80 DIVVDATPGG------------------VGAKNKELYEKAGVKAIFQGGE  111 (341)
T ss_pred             CEEEECCCch------------------hhHHHHHHHHHCCCEEEEcCCC
Confidence            9999987631                  1234567778888888777764

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.07  E-value=0.082  Score=48.42  Aligned_cols=35  Identities=23%  Similarity=0.296  Sum_probs=31.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      ++|.|.|+ |.+|..++..|+++|++|++++++++.
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~   36 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQ   36 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHH
Confidence            47999995 999999999999999999999987543

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.05  E-value=0.023  Score=54.08  Aligned_cols=73  Identities=16%  Similarity=0.226  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceE--EeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFE--LIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~--~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.+|+|+|+ |-+|...++.|...|.+|++++|+.... +.+...+.. .+.  ..+.+...+.+.++|+||++++.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-~~l~~~~g~-~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-RQLDAEFGG-RIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHhcCc-eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            4567999986 8999999999999999999999864321 111111111 111  11112233456789999998753

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.01  E-value=0.048  Score=47.03  Aligned_cols=28  Identities=25%  Similarity=0.321  Sum_probs=26.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVI  144 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~  144 (340)
                      |++.|.||+|.+|+++++.|.+.|+.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            4899999999999999999999999986

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.01  E-value=0.087  Score=43.79  Aligned_cols=36  Identities=28%  Similarity=0.527  Sum_probs=29.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r  148 (340)
                      +.++|+++|.|.+..+|..|+..|.++|..|+....
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~   68 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS   68 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccC
Confidence            578999999999999999999999999999998765

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones]

Probab=95.00  E-value=0.21  Score=45.55  Aligned_cols=35  Identities=34%  Similarity=0.407  Sum_probs=27.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      ..+.-|+|.| .|.+|+|++..|++.|. ++.++|..
T Consensus        72 l~~syVVVVG-~GgVGSwv~nmL~RSG~qKi~iVDfd  107 (430)
T KOG2018|consen   72 LTNSYVVVVG-AGGVGSWVANMLLRSGVQKIRIVDFD  107 (430)
T ss_pred             hcCcEEEEEe-cCchhHHHHHHHHHhcCceEEEechh
Confidence            3444677777 69999999999999998 67776653

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.00  E-value=0.035  Score=53.78  Aligned_cols=72  Identities=22%  Similarity=0.349  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..+++|+|.|+ |.+|..+++.|...|. +|++.+|+..... .+...+.   .+.+..+.....+.++|+||.+.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~-~la~~~g---~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAE-ELAEEFG---GEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHH-HHHHHcC---CcEeeHHHHHHHhccCCEEEECCCC
Confidence            56789999995 9999999999999997 7888888643322 1222221   1233333334456789999988763

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.97  E-value=0.28  Score=42.42  Aligned_cols=36  Identities=28%  Similarity=0.302  Sum_probs=31.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      .++.++|+|.|+ |.+|+.+++.|.+.|. +++++|..
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            345668999995 8899999999999998 79998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.96  E-value=0.13  Score=39.93  Aligned_cols=64  Identities=25%  Similarity=0.408  Sum_probs=45.3

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      |+|.|. |-+|..+++.|.+.+.+|+++++++.....     +....+.++.+|..++.      +.+++.||-+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~-----~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE-----LREEGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH-----HHHTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH-----HHhcccccccccchhhhHHhhcCccccCEEEEcc
Confidence            578885 789999999999977799999985433211     11234778899987753      45788888665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.95  E-value=0.078  Score=46.19  Aligned_cols=94  Identities=18%  Similarity=0.195  Sum_probs=61.6

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEc
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      +|.-.+.++++|+|+| +|-+|..=++.|++.|.+|+++....   .+.+.......++++++.+.....+.+++.||-+
T Consensus         4 lPl~~~l~~k~VlvvG-gG~va~rKa~~ll~~ga~v~Vvs~~~---~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaA   79 (210)
T COG1648           4 LPLFLDLEGKKVLVVG-GGSVALRKARLLLKAGADVTVVSPEF---EPELKALIEEGKIKWIEREFDAEDLDDAFLVIAA   79 (210)
T ss_pred             cceEEEcCCCEEEEEC-CCHHHHHHHHHHHhcCCEEEEEcCCc---cHHHHHHHHhcCcchhhcccChhhhcCceEEEEe
Confidence            4555678899999999 58999999999999999999997654   2233222333445666644444455566777643


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG  222 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~  222 (340)
                      .                 .|-.--..+.++|++.+
T Consensus        80 t-----------------~d~~ln~~i~~~a~~~~   97 (210)
T COG1648          80 T-----------------DDEELNERIAKAARERR   97 (210)
T ss_pred             C-----------------CCHHHHHHHHHHHHHhC
Confidence            2                 12222345778887764

>PRK14852 hypothetical protein; Provisional

Probab=94.94  E-value=0.12  Score=54.56  Aligned_cols=106  Identities=14%  Similarity=0.050  Sum_probs=64.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~  169 (340)
                      .++..+|+|.| .|++|.++++.|...|. +++++|...-...                      +.+.+.-...+++.+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            45677999999 79999999999999997 6777665411100                      000000011244445


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                      ...+..    ..+.++|+||.+.-.               ..+.....+.+.|.+.++.+|..++.+-+
T Consensus       408 ~~~I~~en~~~fl~~~DiVVDa~D~---------------~~~~~rr~l~~~c~~~~IP~I~ag~~G~~  461 (989)
T PRK14852        408 PEGVAAETIDAFLKDVDLLVDGIDF---------------FALDIRRRLFNRALELGIPVITAGPLGYS  461 (989)
T ss_pred             ecCCCHHHHHHHhhCCCEEEECCCC---------------ccHHHHHHHHHHHHHcCCCEEEeeccccC
Confidence            444422    345689999976521               11223345677888888888887775443

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=94.91  E-value=0.043  Score=54.04  Aligned_cols=71  Identities=11%  Similarity=0.196  Sum_probs=46.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..++++++|+|+ |.+|+.++..|.+.|++|++.+|+..... .+......   .....+.. ..+.++|+||++..
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~-~la~~~~~---~~~~~~~~-~~l~~~DiVInatP  399 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAE-ALASRCQG---KAFPLESL-PELHRIDIIINCLP  399 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhcc---ceechhHh-cccCCCCEEEEcCC
Confidence            456789999995 89999999999999999998888643222 12111111   11111111 12467999999874

>PLN02928 oxidoreductase family protein

Probab=94.91  E-value=0.063  Score=50.59  Aligned_cols=77  Identities=18%  Similarity=0.169  Sum_probs=49.8

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cc-cCCCceEEeeCcccccccCCCCEEEEc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HH-FGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~-~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      ....++++.|.| .|-||+.+++.|...|.+|++.+|..........   .. ...........+..++.+.++|+|+.+
T Consensus       155 ~~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        155 DTLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence            457899999999 7999999999999999999999886322111000   00 000000011233455677889999976


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      ..
T Consensus       234 lP  235 (347)
T PLN02928        234 CT  235 (347)
T ss_pred             CC
Confidence            63

>cd08293 PTGR2 Prostaglandin reductase

Probab=94.88  E-value=0.03  Score=52.29  Aligned_cols=34  Identities=26%  Similarity=0.129  Sum_probs=30.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      .+|+|+||+|.+|..+++.+...|. +|+++++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence            7999999999999999988888898 799988754

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN00203 glutamyl-tRNA reductase

Probab=94.87  E-value=0.047  Score=54.09  Aligned_cols=75  Identities=20%  Similarity=0.303  Sum_probs=51.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..+++|+|.|+ |.+|..+++.|...|. +|++++|+..... .+...+....+.+...+.....+.++|+||.+.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~-~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVA-ALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHH-HHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCC
Confidence            56789999996 9999999999999997 7999988654332 22222221223333444444567789999987653

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.85  E-value=0.063  Score=49.21  Aligned_cols=57  Identities=21%  Similarity=0.271  Sum_probs=45.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEe-CCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.++++|+|.|-++.+|..++..|+++|+.|++.. |..                     | .++....+|+||-+.|-
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~---------------------~-l~e~~~~ADIVIsavg~  211 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR---------------------D-LPAVCRRADILVAAVGR  211 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC---------------------C-HHHHHhcCCEEEEecCC
Confidence            367899999999999999999999999999999984 421                     0 13345678999987763

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.85  E-value=0.16  Score=37.36  Aligned_cols=35  Identities=34%  Similarity=0.548  Sum_probs=29.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN  148 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r  148 (340)
                      +.++++++|.|. |.+|..++..|.+. +.+|.+.+|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            456779999997 99999999999998 567777765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.71  E-value=0.06  Score=51.92  Aligned_cols=68  Identities=25%  Similarity=0.205  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ...+++|+|+| .|.||..+++.|...|.+|+++++.+....+...     ..+++..   .++.+.++|+||.+.|
T Consensus       209 ~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-----~G~~v~~---l~eal~~aDVVI~aTG  276 (425)
T PRK05476        209 LIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-----DGFRVMT---MEEAAELGDIFVTATG  276 (425)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-----cCCEecC---HHHHHhCCCEEEECCC
Confidence            35788999999 5999999999999999999999886543221111     1223221   2345668999998765

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.70  E-value=0.07  Score=49.38  Aligned_cols=35  Identities=31%  Similarity=0.242  Sum_probs=31.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +|+|.|.| +|.+|..+++.|.+.|++|++.+|+..
T Consensus         4 ~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          4 PKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            45899998 799999999999999999999998643

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.70  E-value=0.038  Score=50.50  Aligned_cols=74  Identities=16%  Similarity=0.144  Sum_probs=46.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccC-C-C--ceEEeeCcccccccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-N-P--NFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-~-~--~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      .++++++|.|+ |+.|++++-.|++.|. +|++++|..+...+ +...+. . .  .+.....+..+..+.++|+|||+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~-La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQA-LADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH-HHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcC
Confidence            45679999995 9999999999999997 78888886543322 222211 1 0  112211111122345789999876


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      .
T Consensus       203 p  203 (283)
T PRK14027        203 P  203 (283)
T ss_pred             C
Confidence            4

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.69  E-value=0.057  Score=44.78  Aligned_cols=69  Identities=26%  Similarity=0.290  Sum_probs=43.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ...+|+++|+| -|.+|+-+++.|...|.+|++.++.+-..-+...     ..+++..   .++++..+|++|.+.|.
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-----dGf~v~~---~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-----DGFEVMT---LEEALRDADIFVTATGN   88 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-----TT-EEE----HHHHTTT-SEEEE-SSS
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-----cCcEecC---HHHHHhhCCEEEECCCC
Confidence            45788999999 8999999999999999999999885433222221     2344432   34567789999987764

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14851 hypothetical protein; Provisional

Probab=94.69  E-value=0.15  Score=52.21  Aligned_cols=102  Identities=12%  Similarity=0.077  Sum_probs=62.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc-c---------------------cccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-K---------------------ENVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~-~---------------------~~~~~~~~~~~~~~~  169 (340)
                      ..+..+|+|.| .|++|+++++.|...|. +++++|...-.. +                     +.+.+.-...+++.+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            45677999999 79999999999999997 677766431100 0                     000000011244555


Q ss_pred             eCcccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          170 RHDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       170 ~~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                      ...+..    ..+.++|+||.+.-         +      ..+..-..+.+.|.+.++.+|+.+.
T Consensus       119 ~~~i~~~n~~~~l~~~DvVid~~D---------~------~~~~~r~~l~~~c~~~~iP~i~~g~  168 (679)
T PRK14851        119 PAGINADNMDAFLDGVDVVLDGLD---------F------FQFEIRRTLFNMAREKGIPVITAGP  168 (679)
T ss_pred             ecCCChHHHHHHHhCCCEEEECCC---------C------CcHHHHHHHHHHHHHCCCCEEEeec
Confidence            544433    34568999997541         1      1122233567789998888887664

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=94.65  E-value=0.036  Score=51.17  Aligned_cols=71  Identities=27%  Similarity=0.247  Sum_probs=46.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc---ccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~D~Vih~Ag  189 (340)
                      .+.+++|+||+|.+|..+++.+...|.+|+++++..... +.+. .+..  -.++..+....   .+.++|+|++++|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-~~~~-~~~~--~~~~~~~~~~~~~~~~~~~d~v~~~~g  235 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-KILK-ELGA--DYVIDGSKFSEDVKKLGGADVVIELVG  235 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHH-HcCC--cEEEecHHHHHHHHhccCCCEEEECCC
Confidence            456899999999999999999999999999988754322 1111 1111  12222211111   1237999999986

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=94.64  E-value=0.6  Score=42.22  Aligned_cols=70  Identities=17%  Similarity=0.140  Sum_probs=39.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |++|.|.|. |.||+.+++.|.+. +.++.++...... .+.....+.. .+.+ ..|+ +....++|+|+-+++.
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~-~~~~~~~~~~-~~~~-~~d~-~~l~~~~DvVve~t~~   71 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHS-IDAVRRALGE-AVRV-VSSV-DALPQRPDLVVECAGH   71 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCC-HHHHhhhhcc-CCee-eCCH-HHhccCCCEEEECCCH
Confidence            468999997 99999999999876 4566555432211 1111111111 1111 1222 1123568999998863

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=94.58  E-value=0.16  Score=48.05  Aligned_cols=34  Identities=32%  Similarity=0.424  Sum_probs=30.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      |+|.|.| +||+|....--|.+.||+|+++|..+.
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~   34 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDES   34 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHH
Confidence            5899999 899999999999999999999998743

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.54  E-value=0.12  Score=48.04  Aligned_cols=35  Identities=29%  Similarity=0.326  Sum_probs=31.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      -++|.|.| +|-+|..++..|+..|++|++.++.+.
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~   41 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPG   41 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence            35899999 699999999999999999999998754

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.54  E-value=0.1  Score=47.38  Aligned_cols=105  Identities=17%  Similarity=0.135  Sum_probs=68.2

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc----ccCCCCEEEE
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP----LLLEVDQIYH  186 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~D~Vih  186 (340)
                      +.+.++.+|+|+||+|-+|+-..+-..-+|++|+++.-.+++.+-.....--...+|+...|+.+.    .-.++|+.|-
T Consensus       146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence            445678999999999999998876655679999999765443322221111223455555555432    2247999998


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCC
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDP  237 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~  237 (340)
                      |.|-                      .+++++-..   ..|++.++-++-|.++
T Consensus       226 NVGg----------------------~v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         226 NVGG----------------------EVLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             cCCc----------------------hHHHHHHHhhccccceeeeeehhhcCCC
Confidence            8872                      234444322   2489999988888664

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=94.49  E-value=0.13  Score=47.50  Aligned_cols=36  Identities=25%  Similarity=0.248  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++.+++|+|+++.+|..+++.+...|.+|++++++.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~  201 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE  201 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence            467899999999999999999999999999888754

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.47  E-value=0.063  Score=48.94  Aligned_cols=65  Identities=20%  Similarity=0.243  Sum_probs=42.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|.| .|.+|..++..|.++|++|++++++..........    ..++....+.  ..+.++|+||-+.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~----g~~~~~~~~~--~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIER----GLVDEASTDL--SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC----CCcccccCCH--hHhcCCCEEEEcC
Confidence            4789998 79999999999999999999999864332211110    1111111111  2456799999765

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=94.43  E-value=0.091  Score=47.86  Aligned_cols=34  Identities=21%  Similarity=0.366  Sum_probs=28.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      .++|+|.| .|.||+++++.|.++|+.|.++++..
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~   36 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDR   36 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecC
Confidence            34677777 99999999999999999887777654

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.40  E-value=0.16  Score=47.05  Aligned_cols=36  Identities=22%  Similarity=0.367  Sum_probs=31.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      .++|.|.| .|.+|..|+..|++.|++|++++++.+.
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~   39 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGA   39 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            35799998 5999999999999999999999986543

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=94.40  E-value=0.11  Score=51.83  Aligned_cols=69  Identities=25%  Similarity=0.270  Sum_probs=48.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..+.+++|.|.| .|-||+.+++.|...|.+|++.++.......   ..   ..+.  ..+..++.+.++|+|+.+..
T Consensus       134 ~~l~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~---~~---~g~~--~~~~l~ell~~aDvV~l~lP  202 (525)
T TIGR01327       134 TELYGKTLGVIG-LGRIGSIVAKRAKAFGMKVLAYDPYISPERA---EQ---LGVE--LVDDLDELLARADFITVHTP  202 (525)
T ss_pred             cccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHH---Hh---cCCE--EcCCHHHHHhhCCEEEEccC
Confidence            467889999999 7999999999999999999999874321111   01   1122  22345566778999886653

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=94.34  E-value=0.059  Score=50.03  Aligned_cols=34  Identities=29%  Similarity=0.277  Sum_probs=30.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ||+|.|.| .|.+|..++..|++.|++|.+++|++
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~   34 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDP   34 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCH
Confidence            46899999 59999999999999999999999864

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.33  E-value=0.17  Score=43.33  Aligned_cols=40  Identities=30%  Similarity=0.386  Sum_probs=35.9

Q ss_pred             CCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q 019470          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (340)
Q Consensus       109 p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r  148 (340)
                      |...+.++|+|+|.|-+.-+|+-|+..|+++|..|++++.
T Consensus        55 ~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~   94 (197)
T cd01079          55 PYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDI   94 (197)
T ss_pred             ccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEec
Confidence            3455789999999999999999999999999999999864

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.32  E-value=0.093  Score=49.11  Aligned_cols=64  Identities=16%  Similarity=0.246  Sum_probs=46.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ...+++|.|.| .|.||+.+++.|...|.+|++.++.......         ...  ..+..++.+.++|+|+-+.
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~---------~~~--~~~~l~ell~~aDiVil~l  206 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD---------FLT--YKDSVKEAIKDADIISLHV  206 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh---------hhh--ccCCHHHHHhcCCEEEEeC
Confidence            56888999999 7999999999999999999999986432110         011  1223445677899988655

>PRK10637 cysG siroheme synthase; Provisional

Probab=94.31  E-value=0.26  Score=48.29  Aligned_cols=76  Identities=17%  Similarity=0.148  Sum_probs=55.6

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEc
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .|.-.++++++|||.|| |-++..=++.|++.|.+|+++.....   +.+.......++++..-+.....+.+++.||-+
T Consensus         4 ~P~~~~l~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~~~---~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~a   79 (457)
T PRK10637          4 LPIFCQLRDRDCLLVGG-GDVAERKARLLLDAGARLTVNALAFI---PQFTAWADAGMLTLVEGPFDESLLDTCWLAIAA   79 (457)
T ss_pred             eceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHHHHhCCCEEEEeCCCChHHhCCCEEEEEC
Confidence            34455788999999995 88888888999999999999864322   222222234577888877777778888887754

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=94.30  E-value=0.13  Score=37.23  Aligned_cols=34  Identities=32%  Similarity=0.553  Sum_probs=29.9

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      +|+|.| +|++|..++..|.+.|.+|+++.+.+..
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            477888 6999999999999999999999987543

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK08618 ornithine cyclodeaminase; Validated

Probab=94.27  E-value=0.085  Score=49.26  Aligned_cols=73  Identities=16%  Similarity=0.173  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHh-CCC-eEEEEeCCCCCcccccccccC-CCceEEeeCcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIA-RGD-SVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~-~V~~l~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..++++|.| +|.+|++.+..++. ++. +|.+.+|+++...+ +...+. ...+++...+..++.+.++|+||++..
T Consensus       126 ~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~  201 (325)
T PRK08618        126 DAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYA-FAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTN  201 (325)
T ss_pred             CCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHH-HHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccC
Confidence            456899999 79999988888764 454 78888887544322 222111 112344444445566788999998764

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.27  E-value=0.087  Score=48.03  Aligned_cols=76  Identities=21%  Similarity=0.243  Sum_probs=47.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCc--eEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPN--FELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..++++++|.| +|+.+++++..|++.|. +|+++.|+.+... .+.+.+....  +.....+..+. ....|+|||+..
T Consensus       123 ~~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~-~La~~~~~~~~~~~~~~~~~~~~-~~~~dliINaTp  199 (283)
T COG0169         123 DVTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAE-ELADLFGELGAAVEAAALADLEG-LEEADLLINATP  199 (283)
T ss_pred             ccCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHHHhhhccccccccccccccc-ccccCEEEECCC
Confidence            34578999999 69999999999999995 8999998755433 2222222111  11222211111 115899999765


Q ss_pred             CC
Q 019470          190 PA  191 (340)
Q Consensus       190 ~~  191 (340)
                      ..
T Consensus       200 ~G  201 (283)
T COG0169         200 VG  201 (283)
T ss_pred             CC
Confidence            43

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.26  E-value=0.074  Score=50.86  Aligned_cols=73  Identities=16%  Similarity=0.271  Sum_probs=55.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      .+++++||.| .|=+|.-++++|.++|. +|+++.|...... .+...   .+.+++..|.....+.++|+||.+.|..
T Consensus       176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~-~La~~---~~~~~~~l~el~~~l~~~DvVissTsa~  249 (414)
T COG0373         176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAE-ELAKK---LGAEAVALEELLEALAEADVVISSTSAP  249 (414)
T ss_pred             cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHH-HHHHH---hCCeeecHHHHHHhhhhCCEEEEecCCC
Confidence            6788999999 59999999999999995 7888887544332 22222   2367777777778888999999877643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	340
4ef7_B	337	Udp-Xylose Synthase Length = 337		5e-93
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		3e-90
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-26
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		1e-20
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		3e-20
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		3e-20
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		5e-20
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		1e-18
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		5e-16
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		1e-15
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		1e-15
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-15
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		2e-15
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		3e-15
2c5e_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-14
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		1e-14
2c59_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		2e-14
2c54_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		4e-14
2c5a_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		5e-14
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		2e-13
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		2e-13
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-13
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		3e-13
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-13
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-13
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		1e-12
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		1e-12
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		1e-12
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		1e-12
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		1e-12
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		1e-12
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		2e-12
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-12
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		2e-12
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		2e-12
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-12
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		3e-12
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-12
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-12
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		5e-12
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-12
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		5e-12
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		7e-12
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		9e-12
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		4e-11
3slg_A	372	Crystal Structure Of Pbgp3 Protein From Burkholderi		8e-11
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		9e-11
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		9e-11
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		2e-10
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		3e-09
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		1e-08
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		1e-08
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		3e-08
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		6e-08
4b8w_A	319	Crystal Structure Of Human Gdp-L-Fucose Synthase Wi		2e-06
4b8z_A	320	Crystal Structure Of Human Gdp-l-fucose Synthase Wi		2e-06
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		3e-06
1wvg_A	359	Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal		4e-06
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		2e-05
2z1m_A	345	Crystal Structure Of Gdp-D-Mannose Dehydratase From		8e-04
3m2p_A	311	The Crystal Structure Of Udp-N-Acetylglucosamine 4-		8e-04

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score =  328 bits (840), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 156/217 (71%), Positives = 176/217 (81%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L   G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 29  RILITGGAGFVGSHLTDKLXXDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 88
Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLN LGLAKRVGAR LL STSEVYGDP
Sbjct: 89  YIEVDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAKRVGARLLLASTSEVYGDP 148
Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET    Y +  GVEVR+ARIFNT+GPR   +
Sbjct: 149 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEGVEVRVARIFNTFGPRXHXN 208
Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV
Sbjct: 209 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 245

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 118/229 (51%), Gaps = 24/229 (10%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +RIVVTGGAGF+GSHLVD+L+  G  V+VVDN  +GR+E     F NP+ EL   D+ + 
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRRE-----FVNPSAELHVRDLKDY 55
Query: 177 LL---LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSE 232
                ++ D ++H A           P+     NVV T N+L  A++ G R  +  S+S 
Sbjct: 56  SWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 115
Query: 233 VYGDP--LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
           VYGD   +  P++E Y     PI   S Y   K   E +   Y R  GV     R  N  
Sbjct: 116 VYGDADVIPTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVV 168
Query: 291 GPRMCIDDGRVVSNFVAQALRKEP--LTVYGDGKQTRSFQFVSDLVRLT 337
           GPR+      V+ +F+ + LR+ P  L V GDG Q +S+ +V D V  T
Sbjct: 169 GPRL---RHGVIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEAT 213

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 111/229 (48%), Gaps = 28/229 (12%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +RIVVTGGAGF+GSHLVD+L+  G  V+VVD         ++      + EL   D+ + 
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVD---------IVQRDTGGSAELHVRDLKDY 51
Query: 177 LL---LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSE 232
                ++ D ++H A           P+     NVV T N+L  A++ G R  +  S+S 
Sbjct: 52  SWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 111
Query: 233 VYGDP--LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
           VYGD   +  P++E Y     PI   S Y   K   E +   Y R  GV     R  N  
Sbjct: 112 VYGDADVIPTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVV 164
Query: 291 GPRMCIDDGRVVSNFVAQALRKEP--LTVYGDGKQTRSFQFVSDLVRLT 337
           GPR+      V+ +F+ + LR+ P  L V GDG Q +S+ +V D V  T
Sbjct: 165 GPRL---RHGVIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEAT 209

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARG------DSVIVVDNF-FTGRKENVMHHFGNPNFELI 169
           +R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 170 RHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A 223
             D+ +  LL      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 224 RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           R +  ST EVYG           W   +P+   S Y   K  ++ +   YHR  G++VRI
Sbjct: 121 RVVHVSTDEVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
            R  N YGP    +  +++  FV   L    L +YGDG   R +    D  R
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 20/222 (9%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV----V 174
           IVVTGGAGF+GSH+VD+L +  + ++V+DN  +G +E     F N    L++ D+    +
Sbjct: 4   IVVTGGAGFIGSHVVDKL-SESNEIVVIDNLSSGNEE-----FVNEAARLVKADLAADDI 57
Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEV 233
           +  L   ++++H+A          NP +  + NV+ T  +L   ++ G +R + TSTS V
Sbjct: 58  KDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTV 117
Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YG+    P  E Y    +PI   S Y   K   E L   Y     ++  I R  N  G R
Sbjct: 118 YGEAKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRR 172
Query: 294 MCIDDGRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLV 334
                  V+ +F+ +  R  E L + G+G+Q +S+ ++SD V
Sbjct: 173 ST---HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV 211

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 106/232 (45%), Gaps = 20/232 (8%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARG------DSVIVVDNF-FTGRKENVMHHFGNPNFELI 169
           +R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 170 RHDVVEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A 223
             D+ +  LL      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 224 RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           R +  ST++VYG           W   +P+   S Y   K  ++ +   YHR  G++VRI
Sbjct: 121 RVVHVSTNQVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
            R  N YGP    +  +++  FV   L    L +YGDG   R +    D  R
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---RKENVMHHFGNPNFELIRHDVV 174
           RI++TGGAGF+G HL   L+A G+ V V+D+         E        P  EL   D  
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERD-- 66
Query: 175 EPLLLEVDQIYHLACPAS-PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
              L +V  +YHLA   S P  +K  P+  +  NV    ++L L   VG  + ++ ST E
Sbjct: 67  ---LSDVRLVYHLASHKSVPRSFK-QPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCE 121
Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYG 291
           VYG     P  E      +P+  RS Y   K   E +   + R +   EV I R FN YG
Sbjct: 122 VYGQADTLPTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYG 176
Query: 292 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
           P    D   +V    A  L +  L V GDG+Q R F +++D+V
Sbjct: 177 PGERPD--ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVV 217

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
           +I++TGGAGF+GS LV  +I    D+V+VVD   + G   ++     +  F   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 176 PLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA---------- 218
              L       + D + HLA  +        P   I+TN+VGT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG 278
           K+   RF   ST EVYGD       + ++    P    S Y   K +++ L   + R  G
Sbjct: 123 KKSAFRFHHISTDEVYGDL---HSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 279 VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           +   I    N YGP    +  +++   +  AL  + L VYG+G+Q R + +V D  R
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHAR 234

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 27/246 (10%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDV--- 173
           ++++TGG GF+GS+L    +++G  +IV DN       + +H   +  NFE +  D+   
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62
Query: 174 --VEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLL 227
             V  L+ +   D  +HLA   +      NP    + NV GTLN+L   ++  +    + 
Sbjct: 63  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 122
Query: 228 TSTSEVYGDPLQHPQKETY-----------WGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
           +ST++VYGD  Q+   ET            +     +   S Y   K  A+   +DY R 
Sbjct: 123 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 182
Query: 277 AGVEVRIARIFNTYGPR-MCIDDGRVVSNFVAQALR-----KEPLTVYGDGKQTRSFQFV 330
            G+   + R  + YG R     D   V  F  +A+       +P T+ G+GKQ R     
Sbjct: 183 FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 242
Query: 331 SDLVRL 336
            D++ L
Sbjct: 243 EDMISL 248

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 19/239 (7%)
Query: 106 GKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF----FTGRKENVMHHF 161
           G   L  +     I+VTGGAGF+GS+ V   +   ++  ++ NF    ++G   NV    
Sbjct: 14  GTENLYFQSNAXNILVTGGAGFIGSNFVHYXLQSYETYKII-NFDALTYSGNLNNVKSIQ 72
Query: 162 GNPNFELIRHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNM 214
            +PN+  ++ ++    LLE       V  I + A  +       NP+    TNV+GT+ +
Sbjct: 73  DHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTL 132
Query: 215 LGLAKRV-GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY 273
           L L K+    + +  ST EVYG       K   +    P+   S Y   K +A+ + + Y
Sbjct: 133 LELVKKYPHIKLVQVSTDEVYGSL----GKTGRFTEETPLAPNSPYSSSKASADXIALAY 188
Query: 274 HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
           ++   + V + R  N YGP    +  +++   V  AL  + L +YGDG   R +  V+D
Sbjct: 189 YKTYQLPVIVTRCSNNYGPYQYPE--KLIPLXVTNALEGKKLPLYGDGLNVRDWLHVTD 245

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSV--IVVDNF-FTGRKENVMHHFGNPNFELIRHDV- 173
            I+VTGGAGF+GS+ V  +      V   V+D   + G K N+    G+   EL+  D+ 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGD-RVELVVGDIA 64
Query: 174 ----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
               V+ L  + D I H A  +   +   +P   I TN +GT  +L  A++   RF   S
Sbjct: 65  DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 124
Query: 230 TSEVYGD-PLQHP---------QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
           T EVYGD PL+           +K T   N NP    S Y   K  ++ +   + R  GV
Sbjct: 125 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP---SSPYSSTKAASDLIVKAWVRSFGV 181
Query: 280 EVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
           +  I+   N YGP   I+    R ++N +A    K    +YG+GK  R +   +D
Sbjct: 182 KATISNCSNNYGPYQHIEKFIPRQITNILAGIKPK----LYGEGKNVRDWIHTND 232

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 17/235 (7%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHD 172
            ++++VTGG GF+GS+ +  ++ +     VI +D    G    N+     +P +  ++ D
Sbjct: 3   SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGD 62
Query: 173 V-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARF 225
           V     V+ L+ +VD + HLA  +       +P   + +NV+GT  +L   +R     RF
Sbjct: 63  VADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRF 122
Query: 226 LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
           +  ST EVYGD L+    E      + +   S Y   K  ++ L + + R   +   I R
Sbjct: 123 VHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKAASDMLVLGWTRTYNLNASITR 177
Query: 286 IFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI 340
             N YGP    +  +++   + +A     + +YG GK  R + +V D VR  E +
Sbjct: 178 CTNNYGPYQFPE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELV 230

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 28/244 (11%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVV 174
           ++I++TGGAGF+GS +V  +I    D+V+ +D   + G  E++     +  +     D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 175 EPLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---- 223
           +   +       + D + HLA  +        P   I+TN+VGT  +L +A++  +    
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 224 ------RFLLTSTSEVYGDPLQHPQKET------YWGNVNPIGVRSCYDEGKRTAETLTM 271
                 RF   ST EVYGD L HP +         +         S Y   K +++ L  
Sbjct: 121 DKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 331
            + R  G+   +    N YGP    +  +++   +  AL  +PL +YG G Q R + +V 
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237
Query: 332 DLVR 335
           D  R
Sbjct: 238 DHAR 241

>pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           ++ +Y +   L+         +  P   +  Y   K   E L   Y++  G+E RI R  
Sbjct: 145 SACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFH 204
Query: 288 NTYGPRMCIDDGRVV--SNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLV----RLTET 339
           N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + V    RLT++
Sbjct: 205 NIYGPFGTWKGGREAAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 18/231 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF--ELIRHDVV 174
           +R++VTGGAGF+GSH+V+ L+ARG  V V+DN  TG++ENV    G P F  +L   + V
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPK--GVPFFRVDLRDKEGV 58
Query: 175 EPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS- 231
           E    E     + H A  AS      +PV   + N++G LN+L   ++ G   L+ +++ 
Sbjct: 59  ERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTG 118
Query: 232 -EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
             +YG+  +  + E  W    P   +S Y   K   E     Y +  G++    R  N Y
Sbjct: 119 GAIYGEVPEGERAEETW----PPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVY 174
Query: 291 GPRMCID-DGRVVSNFVAQALRKEPLTVY-----GDGKQTRSFQFVSDLVR 335
           GPR     +  VV+ F  + L+  P+T+Y     GD    R + +V D+  
Sbjct: 175 GPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225

>pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           ++ +Y +   L+         +  P   +  Y   K   E L   Y++  G+E RI R  
Sbjct: 145 SACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFH 204
Query: 288 NTYGPRMCIDDGR--VVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLV----RLTET 339
           N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + V    RLT++
Sbjct: 205 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263

>pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           ++ +Y +   L+         +  P   +  Y   +   E L   Y++  G+E RI R  
Sbjct: 145 SACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLERLATEELCKHYNKDFGIECRIGRFH 204
Query: 288 NTYGPRMCIDDGR--VVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLV----RLTET 339
           N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + V    RLT++
Sbjct: 205 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263

>pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 28  ENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRVM 84
Query: 175 EPLLL---EVDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L     VD +++LA     + + + N    +  N + + NM+  A+  G  RF   S
Sbjct: 85  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 144
Query: 230 TSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           ++ +Y +   L+         +  P   +  +   K   E L   Y++  G+E RI R  
Sbjct: 145 SACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFH 204
Query: 288 NTYGPRMCIDDGR--VVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLV----RLTET 339
           N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + V    RLT++
Sbjct: 205 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS 263

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 107/241 (44%), Gaps = 31/241 (12%)
Query: 106 GKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN 165
           G +P G   K  ++ +TG  G +GSH+ + L+ RGD V+ +DNF TGR+E++  H   PN
Sbjct: 13  GLVPRGSHMK--KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH---PN 67
Query: 166 FELIR-----HDVVEPLL--LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
              +      H +V  L+  L+ D + H A         +N      TN VG  N++  A
Sbjct: 68  LTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYN---DTLTNCVGGSNVVQAA 124
Query: 219 KRVG-ARFLLTSTSEVYG-DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG 276
           K+    RF+   T+  YG  P+Q P +  +  N       S Y   K   E    DY   
Sbjct: 125 KKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNP----ANSSYAISKSANE----DYLEY 176
Query: 277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL 336
           +G++    R+ N  GPR     G +   F   +  K+        K  R F FV DL R 
Sbjct: 177 SGLDFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFVT----KARRDFVFVKDLARA 230
Query: 337 T 337
           T
Sbjct: 231 T 231

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 101
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 102 RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 161
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            ++S  YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R F
Sbjct: 162 AASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYF 216
Query: 288 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
           N +G R   +     V+  + A  L+ + + + GDG+ +R F ++ +++++ 
Sbjct: 217 NVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN 268

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 19/231 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 88
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 89  RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 148
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            ++S  YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R F
Sbjct: 149 AASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYF 203
Query: 288 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL 336
           N +G R   +     V+  + A  L+ + + + GDG+ +R F ++ +++++
Sbjct: 204 NVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM 254

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 28/233 (12%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
           +R ++TG AGFVG +L + L  +      V+ F T R          PN E+I  D+   
Sbjct: 13  MRALITGVAGFVGKYLANHLTEQN-----VEVFGTSRNNEAKL----PNVEMISLDIMDS 63
Query: 174 --VEPLLLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK--RVGARFLL 227
             V+ ++ ++  D I+HLA  +S      N   T  TNV GTL++L   +   +  R L 
Sbjct: 64  QRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILT 123
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
             +SE YG  L      +    + P+   S Y   K +   L   Y +  G+++   R F
Sbjct: 124 IGSSEEYGMILPEESPVSEENQLRPM---SPYGVSKASVGMLARQYVKAYGMDIIHTRTF 180
Query: 288 NTYGPRMCIDDGRVVSNFVAQAL-----RKEPLTVYGDGKQTRSFQFVSDLVR 335
           N  GP   +  G V  +F  Q +     ++EP+   G+ +  R F  V D+V+
Sbjct: 181 NHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQ 231

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 88
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 89  RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 148
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            ++S  YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R F
Sbjct: 149 AASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYF 203
Query: 288 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
           N +G R   +     V+  + A  L+ + + + GDG+ +R F ++ +++++ 
Sbjct: 204 NVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN 255

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 19/232 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L+++L+     VI +DNF TG + N      ++       F  I  D+
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI 82
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                 E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    + F  
Sbjct: 83  RDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTY 142
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            ++S  YGD    P+ E   G  NP+   S Y   K   E     Y R  G +    R F
Sbjct: 143 AASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYGFKTIGLRYF 197
Query: 288 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT 337
           N +G R   +     V+  + A  L+ + + + GDG+ +R F ++ +++++ 
Sbjct: 198 NVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN 249

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +ST+ VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSTATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRG 276
            +   R +  STSEVYG        E +    V P+   R  Y   K+  + +   Y   
Sbjct: 119 VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 178
Query: 277 AGVEVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
            G++  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  +
Sbjct: 179 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 238
Query: 331 SD 332
            D
Sbjct: 239 RD 240

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRG 276
            +   R +  STSEVYG        E +    V P+   R  Y   K+  + +   Y   
Sbjct: 119 VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 178
Query: 277 AGVEVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
            G++  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  +
Sbjct: 179 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 238
Query: 331 SD 332
            D
Sbjct: 239 RD 240

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRG 276
            +   R +  STSEVYG        E +    V P+   R  Y   K+  + +   Y   
Sbjct: 119 VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 178
Query: 277 AGVEVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
            G++  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  +
Sbjct: 179 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 238
Query: 331 SD 332
            D
Sbjct: 239 RD 240

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRG 276
            +   R +  STSEVYG        E +    V P+   R  Y   K+  + +   Y   
Sbjct: 119 VKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 178
Query: 277 AGVEVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
            G++  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  +
Sbjct: 179 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 238
Query: 331 SD 332
            D
Sbjct: 239 RD 240

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 17/238 (7%)
Query: 109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFEL 168
           P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P+F  
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---PHFHF 364
Query: 169 IRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
           +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +  
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRGAGVE 280
            R +  STSEVYG        E +    V P+   R  Y   K+  + +   Y    G++
Sbjct: 425 KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQ 484
Query: 281 VRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
             + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 485 FTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 542

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 19/230 (8%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHFGNPNFELIRHDV 173
           ++TG AGF+GS+L++ L+     V+ +DNF TG + N      ++      NF+ I+ D+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 174 -----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLL 227
                       VD + H A   S      +P+ +  TN+ G LNML  A+    + F  
Sbjct: 91  RNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTY 150
Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            ++S  YGD    P+ E   G   P+   S Y   K   E     + R  G      R F
Sbjct: 151 AASSSTYGDHPGLPKVEDTIG--KPL---SPYAVTKYVNELYADVFSRCYGFSTIGLRYF 205
Query: 288 NTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           N +G R   +     V+  + +  ++ + + + GDG+ +R F ++ + V+
Sbjct: 206 NVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 255

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S++ VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S++ VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S++ VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S + VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSAATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 17/242 (7%)
Query: 105 GGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP 164
           G   P    R+  R+++ G  GF+G+HL +RL+      +   +  +      ++H   P
Sbjct: 2   GMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---P 58
Query: 165 NFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
           +F  +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++   
Sbjct: 59  HFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYC 118
Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRG 276
            +   R +  ST+EVYG        E +    V P+   R  Y   K+  + +   Y   
Sbjct: 119 VKYRKRIIFPSTAEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK 178
Query: 277 AGVEVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
            G++  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  +
Sbjct: 179 EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 238
Query: 331 SD 332
            D
Sbjct: 239 RD 240

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S + VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSVATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S + VYGD  + P  E++     P G  +S Y + K   E +  D  +      + + 
Sbjct: 121 FSSAATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 17/230 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
           +R+++ G  GF+G+HL +RL+      +   +  +      ++H   P+F  +  D+   
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNH---PHFHFVEGDISIH 57
Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  ST
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 117
Query: 231 SEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           SEVYG        E +    V P+   R  Y   K+  + +   Y    G++  + R FN
Sbjct: 118 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 177
Query: 289 TYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
             GPR+       I   R ++  +   +   P+ +   GKQ R F  + D
Sbjct: 178 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S++ VYGD  + P  E++     P G  +S + + K   E +  D  +      + + 
Sbjct: 121 FSSSATVYGDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 104/258 (40%), Gaps = 26/258 (10%)
Query: 100 GAVNSGGKIPLGLKRKGL---RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKE 155
           G V  G  +P+ +    L    ++V GGAGFVGS+LV RL+  G + V VVDN  +  K 
Sbjct: 13  GLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI 72
Query: 156 NVMHHFGNPNFELIRHDVVEPLLL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVG 210
           NV  H   P        + +  LL     E D ++HLA          +P+   + N + 
Sbjct: 73  NVPDH---PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLT 129
Query: 211 TLNM---LGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE 267
           TL +   L   KR+       +   +        +       V+     S Y   K   E
Sbjct: 130 TLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189
Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR-----------VVSNFVAQALRKEPLT 316
             ++ YH+   +    AR  N YGP   +  GR           V   F+ +AL+  PL 
Sbjct: 190 FYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP 249
Query: 317 VYGDGKQTRSFQFVSDLV 334
           +   G  TR F FV D+ 
Sbjct: 250 LENGGVATRDFIFVEDVA 267

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S + VYGD  + P  E++     P G  +S + + K   E +  D  +      + + 
Sbjct: 121 FSSAATVYGDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 32/245 (13%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDV- 173
           +R++VTGG+G++GSH   +L+  G  VI++DN    ++    V+   G  +   +  D+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 174 VEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FL 226
            E L+ E      +D + H A   +       P++    NV GTL ++   +    + F+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 227 LTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAETLTMDYHRGA-GVEVRIA 284
            +S + VYGD  + P  E++     P G  +S + + K   E +  D  +      + + 
Sbjct: 121 FSSAATVYGDNPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 285 RIFNTYGPRMCIDDGR----VVSN---FVAQAL--RKEPLTVYG------DGKQTRSFQF 329
           R FN  G     D G     + +N   ++AQ    R++ L ++G      DG   R +  
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 330 VSDLV 334
           V DL 
Sbjct: 236 VMDLA 240

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I++ GGAG++GSH V +L+  G SV+VVDN  TG ++ +       N +L     +  + 
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF 63
Query: 179 LE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG 235
            +  ++ + H A  +        P++    NV G L +L +       +F+ +ST+  YG
Sbjct: 64  TQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYG 123
Query: 236 D-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG--P 292
           +  +    +ET     NP    + Y E K   E +   Y + + +  +I R FN  G  P
Sbjct: 124 EVDVDLITEETM---TNPT---NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATP 177
Query: 293 RMCI-DDGRVVSNFVAQAL-----RKEPLTVYGDGKQT------RSFQFVSDLV 334
              I +D R  ++ +   L     ++E + ++GD   T      R +  V DLV
Sbjct: 178 NGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLV 231

>pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFE---LIRH 171
           K  ++++ G  GF+G HL  R++   D  +   +  T R  +++ H     FE    I  
Sbjct: 23  KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINK 82
Query: 172 DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 231
           + VE  + + D I  L   A+P  Y   P++  + +    L ++  A + G   +  STS
Sbjct: 83  EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTS 142
Query: 232 EVYG---DPLQHPQKETY-WGNVN-PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           EVYG   D    P      +G +N P  + +C    K+  + +   Y    G+   + R 
Sbjct: 143 EVYGMCADEQFDPDASALTYGPINKPRWIYAC---SKQLMDRVIWGYGM-EGLNFTLFRP 198
Query: 287 FNTYGPRMCI------DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
           FN  GP +           RVV+ F+   +R E +++   G Q R+F +V D
Sbjct: 199 FNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDD 250

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 32/246 (13%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-------HHFGNPNFELIRH 171
           ++VTGGAG++GSH V  LI  G   +V DN      ++V        HH      +L   
Sbjct: 14  VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 73
Query: 172 DVVEPLLLE--VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
             +E +  E  +D + H A   +       P++    N++GT+ +L L ++   ++F+ +
Sbjct: 74  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 133
Query: 229 STSEVYGDPLQHPQ-----KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           S++ VYGD  + P      +E   G  NP      Y   K   E +  D +       + 
Sbjct: 134 SSATVYGDATRFPNMIPIPEECPLGPTNP------YGHTKYAIENILNDLYNSDKKSWKF 187
Query: 284 A--RIFNTYGPR---MCIDDGRVVSN----FVAQAL--RKEPLTVYGDGKQTRSFQFVSD 332
           A  R FN  G     +  +D   + N    ++AQ    R+E L ++GD   +R    + D
Sbjct: 188 AILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRD 247
Query: 333 LVRLTE 338
            + + +
Sbjct: 248 YIHVVD 253

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 36/239 (15%)
Query: 119 IVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-----FTGRKENVMHHFGNP---NFEL 168
           I++TGGAGFVGS+L            V+V+D F     F+  + + + HF N      E+
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72
Query: 169 IRHDVVEPL------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
           I  D+  PL       L  D ++H A  +       N    +KTN    LN+L +A+   
Sbjct: 73  IAADINNPLDLRRLEKLHFDYLFHQAAVSDTT--MLNQELVMKTNYQAFLNLLEIARSKK 130
Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV----RSCYDEGKRTAETLTMDYHRGAG 278
           A+ +  S++ VYG+            N +P  V    + C DE   +        H    
Sbjct: 131 AKVIYASSAGVYGNT---KAPNVVGKNESPENVYGFSKLCMDEFVLS--------HSNDN 179
Query: 279 VEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           V+V + R FN YGPR    +    +V      A+  + + ++  G+Q R F ++ D+++
Sbjct: 180 VQVGL-RYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQ 237

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 25/196 (12%)
Query: 111 GLKRKG--LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFEL 168
           GL  +G  +RI++TGGAG +GS+L++  + +G  ++V+DNF TG++E +    G     +
Sbjct: 13  GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAG---LSV 69
Query: 169 IRHDVVEPLLLEVDQIYHLACPASPVH----YKFNP---VKTIKTNVVGTLNMLGLAKRV 221
           I   V +  LLE  + +    P   VH    YK +P    +   TNV G++N+   A + 
Sbjct: 70  IEGSVTDAGLLE--RAFDSFKPTHVVHSAAAYK-DPDDWAEDAATNVQGSINVAKAASKA 126
Query: 222 GARFLLT-STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE 280
           G + LL   T+  YG P   P         +P    + Y   K   E   M     + V 
Sbjct: 127 GVKRLLNFQTALCYGRPATVPIPID-----SPTAPFTSYGISKTAGEAFLM----MSDVP 177
Query: 281 VRIARIFNTYGPRMCI 296
           V   R+ N  GPR+ I
Sbjct: 178 VVSLRLANVTGPRLAI 193

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENVMH--HFGNPNFELIRHDV 173
           ++TG  G  GS+L + L+ +G  V  +     +F T R +++    H  NP F L   D+
Sbjct: 5   LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 64
Query: 174 VEP-----LLLEV--DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNML------GLAK 219
            +      +L EV  D++Y+L    S V   F +P  T   + +GTL +L      GL K
Sbjct: 65  SDTSNLTRILREVQPDEVYNLGA-MSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123
Query: 220 RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
           +   RF   STSE+YG   + PQKET      P   RS Y   K  A  +T++Y    G+
Sbjct: 124 KT--RFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGM 176
Query: 280 EVRIARIFNTYGPR-----MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
                 +FN   PR     +     R ++N +AQ L  E     G+    R +    D V
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIAN-IAQGL--ESCLYLGNMDSLRDWGHAKDYV 233
Query: 335 RL 336
           ++
Sbjct: 234 KM 235

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 40/252 (15%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +      E++  +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLL-TSTSEVYGDPLQHPQKETY--WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
            + L+ +S++ VYG+P   P  E +   G  NP      Y + K   E +  D  +    
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADKT 177
Query: 280 -EVRIARIFNTYGPRM--CI-DDGRVVSN----FVAQAL--RKEPLTVYG------DGKQ 323
             V + R FN  G     CI +D + + N    +V+Q    R+E L V+G      DG  
Sbjct: 178 WNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 324 TRSFQFVSDLVR 335
            R +  V DL +
Sbjct: 238 VRDYIHVVDLAK 249

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 40/252 (15%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +      E++  +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLL-TSTSEVYGDPLQHPQKETY--WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
            + L+ +S++ VYG+P   P  E +   G  NP      Y + K   E +  D  +    
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADKT 177
Query: 280 -EVRIARIFNTYGPRM--CI-DDGRVVSN----FVAQAL--RKEPLTVYG------DGKQ 323
             V + R FN  G     CI +D + + N    +V+Q    R+E L V+G      DG  
Sbjct: 178 WNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 324 TRSFQFVSDLVR 335
            R +  V DL +
Sbjct: 238 VRDYIHVVDLAK 249

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 110/252 (43%), Gaps = 40/252 (15%)
Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------ENV--MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +      E++  +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 170 RHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123
Query: 223 ARFLL-TSTSEVYGDPLQHPQKETY--WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
            + L+ +S++ VYG+P   P  E +   G  NP      Y + K   E +  D  +    
Sbjct: 124 VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADKT 177
Query: 280 -EVRIARIFNTYGPRM--CI-DDGRVVSN----FVAQAL--RKEPLTVYG------DGKQ 323
               + R FN  G     CI +D + + N    +V+Q    R+E L V+G      DG  
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237
Query: 324 TRSFQFVSDLVR 335
            R +  V DL +
Sbjct: 238 VRDYIHVVDLAK 249

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVEP 176
           I+VTGGAG++GSH    L+A G  V++ DN    ++E +  +             DV + 
Sbjct: 8   ILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE 67
Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG------------LAKRVGAR 224
             L   +I+      + +H  F  +K +  +V   +                + +R   R
Sbjct: 68  RALA--RIFDAHPITAAIH--FAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKR 123
Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
            + +S++ VYG P + P  ET+     P+   + Y + K  AE +  D    A    R+A
Sbjct: 124 IVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVE-AADPSWRVA 177
Query: 285 --RIFNTYGPR---MCIDDGRVVSN----FVAQAL--RKEPLTVYG------DGKQTRSF 327
             R FN  G     +  +D   + N    +VAQ    + E L V+G      DG   R +
Sbjct: 178 TLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDY 237
Query: 328 QFVSDLVR 335
             V DL R
Sbjct: 238 IHVVDLAR 245

>pdb|4B8W|A Chain A, Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Nadp And Gdp, Tetragonal Crystal Form Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 23/233 (9%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + +RI+VTGG+G VG   + +++A G  +   D  F   K+           +L      
Sbjct: 5   QSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDA----------DLTDTAQT 53
Query: 175 EPLLLEVD--QIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
             L  +V    + HLA     +  + K+N +   + NV    N+L  A  VGAR +++  
Sbjct: 54  RALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVSCL 112
Query: 231 SE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           S  ++ D   +P  ET   N  P      Y   KR  +     Y +  G         N 
Sbjct: 113 STCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNV 172
Query: 290 YGP--RMCIDDGRVVSNFVAQA-LRK---EPLTVYGDGKQTRSFQFVSDLVRL 336
           +GP     I+DG V+   + +  L K     LTV+G G   R F +  DL +L
Sbjct: 173 FGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL 225

>pdb|4B8Z|A Chain A, Crystal Structure Of Human Gdp-l-fucose Synthase With Bound Nadp And Gdp, Rhombohedral Crystal Form Length = 320

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 97/233 (41%), Gaps = 23/233 (9%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + +RI+VTGG+G VG   + +++A G  +   D  F   K+           +L      
Sbjct: 6   QSMRILVTGGSGLVGK-AIQKVVADGAGLPGEDWVFVSSKDA----------DLTDTAQT 54
Query: 175 EPLLLEVD--QIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
             L  +V    + HLA     +  + K+N +   + NV    N+L  A  VGAR +++  
Sbjct: 55  RALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVSCL 113
Query: 231 SE-VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           S  ++ D   +P  ET   N  P      Y   KR  +     Y +  G         N 
Sbjct: 114 STCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNV 173
Query: 290 YGP--RMCIDDGRVVSNFVAQA-LRK---EPLTVYGDGKQTRSFQFVSDLVRL 336
           +GP     I+DG V+   + +  L K     LTV+G G   R F +  DL +L
Sbjct: 174 FGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL 226

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVV----DNFFTGRKENVMHHFGNP------NFELI 169
           ++TG  G  GS+L + L+ +G  V  +     +F TGR E   H + NP      N +L 
Sbjct: 28  LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIE---HLYKNPQAHIEGNMKLH 84
Query: 170 RHDVVEPLLL-----EVD--QIYHLACPASPVHYKFNPVK-TIKTNVVGTLNMLGLAKRV 221
             D+ +   L     EV   +IY+L    S V   F+  + T   + VGTL +L   K  
Sbjct: 85  YGDLTDSTCLVKIINEVKPTEIYNLGAQ-SHVKISFDLAEYTADVDGVGTLRLLDAVKTC 143
Query: 222 G----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 277
           G     +F   STSE+YG   + PQKET      P   RS Y   K  A  + +++    
Sbjct: 144 GLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAY 198
Query: 278 GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY 318
            +      +FN   PR         +NFV + + +    +Y
Sbjct: 199 NLFAVNGILFNHESPRRG-------ANFVTRKISRSVAKIY 232

>pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 23/167 (13%)
Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARG--------DSVIVVDNFFTGRKENVMH-HFGN-P 164
           +G R+ VTG  GF GS L   L   G        D+  V   F   R  ++M  H G+  
Sbjct: 8   QGKRVFVTGHTGFKGSWLSLWLTEMGAIVKGYALDAPTVPSLFEIVRLNDLMESHIGDIR 67
Query: 165 NFELIRHDVVEPLLLEVDQIYHLAC-PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
           +FE +R  + E    + + ++H+A  P   + Y+  P+KT  TNV+GT+++L   K+VG 
Sbjct: 68  DFEKLRSSIAE---FKPEIVFHMAAQPLVRLSYE-QPIKTYSTNVMGTVHLLETVKQVGN 123
Query: 224 -RFLLTSTSEVYGDPLQHPQKETYWG--NVNPIGVRSCYDEGKRTAE 267
            + ++  TS+   D      +E  WG     P+G    Y   K  AE
Sbjct: 124 IKAVVNITSDKCYD-----NREWVWGYRENEPMGGYDPYSNSKGCAE 165

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVV 174
           +R++V GGAG++GSH V  L+   + SV++VD+   T  K + +    N   +L + D  
Sbjct: 3   MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62
Query: 175 EP------LLLEV-------------------DQIYHLACPASPVHYKFNPVKTIKTNVV 209
           +P        LEV                   D + H+    +      +P+K    NVV
Sbjct: 63  KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122
Query: 210 GTLNML-GLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV------RSCYDEG 262
           G L +L  +      + + +S++ ++G+P       +   N  PI +       S Y E 
Sbjct: 123 GILRLLQAMLLHKCDKIIFSSSAAIFGNPTM----GSVSTNAEPIDINAKKSPESPYGES 178
Query: 263 KRTAETLTMDYHRGAGVEVRIARIFNTYG 291
           K  AE +  D     G++    R FN  G
Sbjct: 179 KLIAERMIRDCAEAYGIKGICLRYFNACG 207

>pdb|2Z1M|A Chain A, Crystal Structure Of Gdp-D-Mannose Dehydratase From Aquifex Aeolicus Vf5 Length = 345

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 25/197 (12%)
Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD----NFFTGRKENVMHHFGNPN-FELIR 170
           G R ++TG  G  G++L   L+ +G  V   D     F + R    +   G  N  ++I 
Sbjct: 3   GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWR----LKELGIENDVKIIH 58
Query: 171 HDVVE-------PLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRV- 221
            D++E          ++ D++Y+LA   S V   F  P+ T + + +G L +L   + V 
Sbjct: 59  MDLLEFSNIIRTIEKVQPDEVYNLAA-QSFVGVSFEQPILTAEVDAIGVLRILEALRTVK 117
Query: 222 -GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE 280
              +F   STSE++G   + PQ E       P   RS Y   K     +T++Y     + 
Sbjct: 118 PDTKFYQASTSEMFGKVQEIPQTEK-----TPFYPRSPYAVAKLFGHWITVNYREAYNMF 172
Query: 281 VRIARIFNTYGPRMCID 297
                +FN   P   I+
Sbjct: 173 ACSGILFNHESPLRGIE 189

>pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 16/220 (7%)
Query: 117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           L+I VTGG GF+G ++V+ +   G++ I++     G K    + +   ++ L   D++  
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSI-GNKAINDYEYRVSDYTL--EDLINQ 59
Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYG 235
            L +VD + HLA            +     N + T N+         +  +  ST   Y 
Sbjct: 60  -LNDVDAVVHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114
Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
           D    P     W           Y   K   E +   Y R  G+ ++  R  + YG    
Sbjct: 115 DETSLP-----WNEKELPLPDLXYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNE- 168
Query: 296 IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
             +   ++ F  QA   E LT++ +    R F +  D  +
Sbjct: 169 -KNNYXINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK 207

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	340
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	1e-158
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	1e-139
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-137
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-126
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-115
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-104
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	2e-90
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-68
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	8e-63
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-62
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	9e-57
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-55
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	9e-55
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-53
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-51
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	9e-51
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	4e-50
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	5e-48
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	8e-48
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	4e-47
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-46
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	3e-41
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	4e-41
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-39
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-38
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	2e-37
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	4e-29
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	6e-29
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	6e-28
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	1e-27
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	5e-26
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	6e-24
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	5e-20
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-16
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	4e-15
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	5e-15
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	9e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	4e-14
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	2e-13
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-13
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	3e-13
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	7e-13
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	7e-13
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	7e-13
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-11
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	3e-11
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	4e-11
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-09
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-09
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	3e-09
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	1e-08
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	3e-08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	7e-08
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-08
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	1e-07
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	1e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-07
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	2e-07
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	6e-07
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	1e-06
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	5e-06
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	6e-06
1xq6_A	253	Unknown protein; structural genomics, protein stru	8e-06
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	1e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-04
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	4e-04
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	7e-04

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  444 bits (1144), Expect = e-158
 Identities = 161/244 (65%), Positives = 189/244 (77%), Gaps = 4/244 (1%)

Query: 96  RVGFGAVNSGGKIPL----GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT 151
                  +S G+  L     +++   RI++TGGAGFVGSHL D+L+  G  V VVDNFFT
Sbjct: 3   SSHHHHHHSSGRENLYFQGHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT 62

Query: 152 GRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGT 211
           GRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GT
Sbjct: 63  GRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGT 122

Query: 212 LNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM 271
           LNMLGLAKRVGAR LL STSEVYGDP  HPQ E YWG+VNPIG R+CYDEGKR AET+  
Sbjct: 123 LNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCY 182

Query: 272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS 331
            Y +  GVEVR+ARIFNT+GPRM ++DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VS
Sbjct: 183 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 242

Query: 332 DLVR 335
           DLV 
Sbjct: 243 DLVN 246

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  398 bits (1025), Expect = e-139
 Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 19/234 (8%)

Query: 117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-- 173
           +R+++ G  GF+G+HL +RL+      V  +D       + +     +P+F  +  D+  
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 174 ----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
               +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 230 TSEVYGDPLQHPQKETYWG-NVNPIGV-RSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           TSEVYG        E +    V P+   R  Y   K+  + +   Y    G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176

Query: 288 NTYGPRM------CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           N  GPR+       I   R ++  +   +   P+ +   GKQ R F  + D + 
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE 230

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  393 bits (1012), Expect = e-137
 Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 24/260 (9%)

Query: 92  AYNPRVGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT 151
           A++     G + +  + P  +K K  ++++ G  GF+G HL  R++   D  +   +  T
Sbjct: 2   AHHHHHHMGTLEAQTQGPGSMKAK--KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT 59

Query: 152 GRKENVMHHFGNPNFELIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIK 205
            R  +++ H           D+      VE  + + D I  L   A+P  Y   P++  +
Sbjct: 60  DRLGDLVKH---ERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFE 116

Query: 206 TNVVGTLNMLGLAKRVGARFLLTSTSEVYG---DPLQHPQKETY-WGNVNPIGVRSCYDE 261
            +    L ++  A + G   +  STSEVYG   D    P      +G +N    R  Y  
Sbjct: 117 LDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP--RWIYAC 174

Query: 262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPL 315
            K+  + +   Y    G+   + R FN  GP +           RVV+ F+   +R E +
Sbjct: 175 SKQLMDRVIWGYGM-EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENI 233

Query: 316 TVYGDGKQTRSFQFVSDLVR 335
           ++   G Q R+F +V D + 
Sbjct: 234 SLVDGGSQKRAFTYVDDGIS 253

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  366 bits (942), Expect = e-126
 Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 13/232 (5%)

Query: 114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV 173
            + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V
Sbjct: 27  SENLKISITGAGGFIASHIARRLKHEGHYVIASD---WKKNEHMTEDMFCDEFHLVDLRV 83

Query: 174 VE---PLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
           +E    +   VD +++LA     + +   N    +  N + + NM+  A+  G  RF   
Sbjct: 84  MENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYA 143

Query: 229 STSEVYGDPLQHPQKETY--WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
           S++ +Y +  Q           +  P   +  +   K   E L   Y++  G+E RI R 
Sbjct: 144 SSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRF 203

Query: 287 FNTYGPRMCIDDGR--VVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVR 335
            N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + V 
Sbjct: 204 HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 255

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  337 bits (867), Expect = e-115
 Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 26/259 (10%)

Query: 100 GAVNSGGKIPLGLKRKGL---RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKE 155
           G V  G  +P+ +    L    ++V GGAGFVGS+LV RL+  G + V VVDN  +  K 
Sbjct: 13  GLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI 72

Query: 156 NVMHHFGNPNFELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVG 210
           NV  H   P        +     +  L  E D ++HLA          +P+   + N + 
Sbjct: 73  NVPDH---PAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLT 129

Query: 211 TLNMLGLAKRVGA--RFLLTSTSEVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAE 267
           TL +    K      + + ++      +      +       V+     S Y   K   E
Sbjct: 130 TLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189

Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGR-----------VVSNFVAQALRKEPLT 316
             ++ YH+   +    AR  N YGP   +  GR           V   F+ +AL+  PL 
Sbjct: 190 FYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP 249

Query: 317 VYGDGKQTRSFQFVSDLVR 335
           +   G  TR F FV D+  
Sbjct: 250 LENGGVATRDFIFVEDVAN 268

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  308 bits (791), Expect = e-104
 Identities = 70/223 (31%), Positives = 99/223 (44%), Gaps = 18/223 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVV 174
           RI++TGGAGF+G HL   L+A G+ V V+D+                  P  EL   D+ 
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS 68

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
                +V  +YHLA   S       P+  +  NV    ++L L   VG  + ++ ST EV
Sbjct: 69  -----DVRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGSTCEV 122

Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE-VRIARIFNTYGP 292
           YG     P  E      +P+  RS Y   K   E +   + R +    V I R FN YGP
Sbjct: 123 YGQADTLPTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGP 177

Query: 293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
                   +V    A  L +  L V GDG+Q R F +++D+V 
Sbjct: 178 GE--RPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVD 218

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  272 bits (697), Expect = 2e-90
 Identities = 79/223 (35%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RIVVTGGAGF+GSHLVD+L+  G  V+VVDN  +GR+E V     NP+ EL   D+ +  
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS 56

Query: 178 LLE---VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
                  D ++H A           P+     NVV T N+L  A++ G    +  S+S V
Sbjct: 57  WGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTV 116

Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           YGD    P  E       P    S Y   K   E +   Y R  GV     R  N  GPR
Sbjct: 117 YGDADVIPTPEEE-----PYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPR 171

Query: 294 MCIDDGRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVR 335
           +      V+ +F+ +  R    L V GDG Q +S+ +V D V 
Sbjct: 172 L---RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVE 211

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  216 bits (553), Expect = 1e-68
 Identities = 48/223 (21%), Positives = 82/223 (36%), Gaps = 24/223 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I VTGG GF+G ++V+ +   G++ I++      +  N        ++E    D     
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAIN--------DYEYRVSDYTLED 55

Query: 178 LLE----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSE 232
           L+     VD + HLA            +     N + T N+         +  +  ST  
Sbjct: 56  LINQLNDVDAVVHLAATRG-SQG---KISEFHDNEILTQNLYDACYENNISNIVYASTIS 111

Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            Y D    P  E       P      Y   K   E +   Y R  G+ ++  R  + YG 
Sbjct: 112 AYSDETSLPWNEKEL--PLPD---LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF 166

Query: 293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
                +  +++ F  QA   E LT++ +    R F +  D  +
Sbjct: 167 NE--KNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK 207

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  202 bits (517), Expect = 8e-63
 Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 19/238 (7%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPN 165
           L  +    ++TG AGF+GS+L++ L+     V+ +DNF TG + N+             N
Sbjct: 23  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 82

Query: 166 FELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR 220
           F+ I+ D+            VD + H A   S      +P+ +  TN+ G LNML  A+ 
Sbjct: 83  FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 142

Query: 221 VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
                F   ++S  YGD    P+ E   G   P+   S Y   K   E     + R  G 
Sbjct: 143 AKVQSFTYAASSSTYGDHPGLPKVEDTIG--KPL---SPYAVTKYVNELYADVFSRCYGF 197

Query: 280 EVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
                R FN +G R   +     V+  + +  ++ + + + GDG+ +R F ++ + V+
Sbjct: 198 STIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 255

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  201 bits (513), Expect = 1e-62
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 26/227 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            IVVTGGAGF+GSH+VD+L    + ++V+DN  +G +E V     N    L++ D+    
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFV-----NEAARLVKADLAADD 56

Query: 178 LLE----VDQIYHLAC----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT 228
           + +     ++++H+A              NP +  + NV+ T  +L   ++ G  R + T
Sbjct: 57  IKDYLKGAEEVWHIAANPDVRIGAE----NPDEIYRNNVLATYRLLEAMRKAGVSRIVFT 112

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           STS VYG+    P  E Y    +PI   S Y   K   E L   Y     ++  I R  N
Sbjct: 113 STSTVYGEAKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFAN 167

Query: 289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
             G R     G +    +      E L + G+G+Q +S+ ++SD V 
Sbjct: 168 VIGRRS--THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVD 212

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  187 bits (476), Expect = 9e-57
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 21/239 (8%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH------HFGNPN 165
           L       ++TG AGF+GS+L+++L+     VI +DNF TG + N+              
Sbjct: 21  LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSR 80

Query: 166 FELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAK 219
           F  I  D+      E ++  VD + H A   S V     +P+ T  TN+ G LN+L  AK
Sbjct: 81  FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGS-VPRSIVDPITTNATNITGFLNILHAAK 139

Query: 220 RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG 278
                 F   ++S  YGD    P+ E   G  NP+   S Y   K   E     Y R  G
Sbjct: 140 NAQVQSFTYAASSSTYGDHPALPKVEENIG--NPL---SPYAVTKYVNEIYAQVYARTYG 194

Query: 279 VEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
            +    R FN +G R   +     V+  + A  L+ + + + GDG+ +R F ++ ++++
Sbjct: 195 FKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score =  190 bits (485), Expect = 2e-55
 Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 19/241 (7%)

Query: 109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFE 167
           P    R+  R+++ G  GF+G+HL +RL+      V  +D       + +     +P+F 
Sbjct: 308 PACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFH 363

Query: 168 LIRHDV------VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV 221
            +  D+      +E  + + D +  L   A+P+ Y  NP++  + +    L ++    + 
Sbjct: 364 FVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKY 423

Query: 222 GARFLLTSTSEVYGDPLQHPQKETYWGNV-NPIG-VRSCYDEGKRTAETLTMDYHRGAGV 279
             R +  STSEVYG        E +   +  P+   R  Y   K+  + +   Y    G+
Sbjct: 424 RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGL 483

Query: 280 EVRIARIFNTYGPRM------CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
           +  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  + D 
Sbjct: 484 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 543

Query: 334 V 334
           +
Sbjct: 544 I 544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score =  182 bits (463), Expect = 9e-55
 Identities = 49/219 (22%), Positives = 76/219 (34%), Gaps = 43/219 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
            IV+TG  GFVG +L   L +  D  +  V                       + + +E 
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELES 42

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD 236
            LL+ D I HLA    P     +  +    NV    ++L +  R   +  +  +S +   
Sbjct: 43  ALLKADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQAT 98

Query: 237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI 296
                         NP      Y E K   E L  +Y    G  V I R  N +G     
Sbjct: 99  QD------------NP------YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKP 140

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           +   V++ F  +  R E + V  D     +  +V D+V 
Sbjct: 141 NYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVA 178

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  178 bits (453), Expect = 1e-53
 Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 31/241 (12%)

Query: 104 SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN 163
           S G +P G   K  ++ +TG  G +GSH+ + L+ RGD V+ +DNF TGR+E++  H   
Sbjct: 11  SSGLVPRGSHMK--KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--- 65

Query: 164 PNFELIRHDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG 216
           PN   +   + +  L+         D + H A          +      TN VG  N++ 
Sbjct: 66  PNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPD---DWYNDTLTNCVGGSNVVQ 122

Query: 217 LAKRVGA-RFLLTSTSEVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 274
            AK+    RF+   T+  YG  P+Q P +  +    NP    S Y   K   E     Y 
Sbjct: 123 AAKKNNVGRFVYFQTALCYGVKPIQQPVRLDH--PRNPA--NSSYAISKSANED----YL 174

Query: 275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
             +G++    R+ N  GPR        +  F  +    +   V    K  R F FV DL 
Sbjct: 175 EYSGLDFVTFRLANVVGPRNVSG---PLPIFFQRLSEGKKCFV---TKARRDFVFVKDLA 228

Query: 335 R 335
           R
Sbjct: 229 R 229

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  174 bits (442), Expect = 1e-51
 Identities = 56/241 (23%), Positives = 99/241 (41%), Gaps = 32/241 (13%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDS--VIVVDNFFTGRKENVMH--------HFGNP 164
           +   I++TGGAGFVGS+L            V+V+D F +    +           +    
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 165 NFELIRHDVVEPLLLE------VDQIYHL-ACPASPVHYKFNPVKTIKTNVVGTLNMLGL 217
             E+I  D+  PL L        D ++H  A   + +    N    +KTN    LN+L +
Sbjct: 69  KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTML---NQELVMKTNYQAFLNLLEI 125

Query: 218 AKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 277
           A+   A+ +  S++ VYG+  + P       N +P    + Y   K   +   + +    
Sbjct: 126 ARSKKAKVIYASSAGVYGNT-KAPNVVGK--NESPE---NVYGFSKLCMDEFVLSHS--N 177

Query: 278 GVEVRIARIFNTYGPRMCIDDGR---VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 334
                  R FN YGPR      +   +V      A+  + + ++  G+Q R F ++ D++
Sbjct: 178 DNVQVGLRYFNVYGPRE-FYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236

Query: 335 R 335
           +
Sbjct: 237 Q 237

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  171 bits (436), Expect = 9e-51
 Identities = 51/230 (22%), Positives = 87/230 (37%), Gaps = 17/230 (7%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDV 173
           +G  I+VTGGAGF+GS++V  L  +G + ++VVDN   G K   +    N    + + D 
Sbjct: 45  EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDF 103

Query: 174 VEPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLT 228
           +  ++       V+ I+H    +S   +    +  +  N   +  +L         FL  
Sbjct: 104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLYA 161

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           S++  YG       +        P+   + +   K   +         A  ++   R FN
Sbjct: 162 SSAATYGGRTSDFIESRE--YEKPL---NVFGYSKFLFDEYVRQILPEANSQIVGFRYFN 216

Query: 289 TYGPRMCIDD--GRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVR 335
            YGPR         V  +   Q    + P    G     R F +V D+  
Sbjct: 217 VYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD 266

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  168 bits (428), Expect = 4e-50
 Identities = 51/226 (22%), Positives = 85/226 (37%), Gaps = 17/226 (7%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTGGAGF+GS++V  L  +G + ++VVDN   G K   +    N    + + D +  +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 232
           +       V+ I+H    +S   +    +  +  N   +  +L         FL  S++ 
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLYASSAA 118

Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            YG       +        P+   + Y   K   +         A  ++   R FN YGP
Sbjct: 119 TYGGRTSDFIESR--EYEKPL---NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGP 173

Query: 293 RMCIDD--GRVVSNFVAQALR-KEPLTVYGDGKQTRSFQFVSDLVR 335
           R         V  +   Q    + P    G     R F +V D+  
Sbjct: 174 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD 219

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  163 bits (414), Expect = 5e-48
 Identities = 47/228 (20%), Positives = 86/228 (37%), Gaps = 25/228 (10%)

Query: 119 IVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTG +G +G+ LV  L  + G   ++  +                  + I  DV    
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD---------TGGIKFITLDVSNRD 52

Query: 178 LLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS 229
            ++       +D I+HLA   S    + +P    K N+ GT N+L  AK+    + ++ S
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILS-AKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPS 111

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT 289
           T  V+G      +      ++     R+ +   K  AE L   Y+   G++VR  R    
Sbjct: 112 TIGVFGPETPKNKVP----SITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI 167

Query: 290 YGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
              +     G           A+++E    Y    +     ++ D ++
Sbjct: 168 ISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALK 215

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  162 bits (412), Expect = 8e-48
 Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 22/229 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +I++ G  G +G+ L  +L    G   ++  +      + V       +      + ++ 
Sbjct: 4   KILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV------NSGPFEVVNALDF 57

Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLT 228
             +E       +  IY +A   S    + NP      N+    ++L LAK     +    
Sbjct: 58  NQIEHLVEVHKITDIYLMAALLS-ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWP 116

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           S+  V+G                 +   + Y   K+  E     YH   GV+VR  R   
Sbjct: 117 SSIAVFGPTTPKENTP----QYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPG 172

Query: 289 TYGPRMCIDDGR--VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
                     G      +   +A+  +    +   +      ++ D + 
Sbjct: 173 LISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAID 221

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  160 bits (408), Expect = 4e-47
 Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 34/238 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           R++VTGGAGF+GSH+V+ L+ARG  V V+DN  TG++ENV            R D+ +  
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKE 56

Query: 178 LLE-------VDQIYHLAC----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RF 225
            +E          + H A       S V    +PV   + N++G LN+L   ++ G  + 
Sbjct: 57  GVERAFREFRPTHVSHQAAQASVKVS-VE---DPVLDFEVNLLGGLNLLEACRQYGVEKL 112

Query: 226 LLTSTSE-VYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
           +  ST   +YG+ P     +ET+     P    S Y   K   E     Y +  G++   
Sbjct: 113 VFASTGGAIYGEVPEGERAEETW--PPRPK---SPYAASKAAFEHYLSVYGQSYGLKWVS 167

Query: 284 ARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYG-----DGKQTRSFQFVSDLVR 335
            R  N YGPR     +  VV+ F  + L+  P+T+Y      D    R + +V D+  
Sbjct: 168 LRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  158 bits (401), Expect = 1e-46
 Identities = 52/229 (22%), Positives = 82/229 (35%), Gaps = 39/229 (17%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           R++VTG AG VGS +   L      V + D    G  E         + E++  D+    
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEA--------HEEIVACDLADAQ 55

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPV-KTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
            V  L+ + D I HL   +        P    ++ N++G  N+   A+ +G  R +  S+
Sbjct: 56  AVHDLVKDCDGIIHLGGVSVE-----RPWNDILQANIIGAYNLYEAARNLGKPRIVFASS 110

Query: 231 SEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
           +   G   +  + +T      P    S Y   K   E L   Y+    +E    RI + +
Sbjct: 111 NHTIGYYPRTTRIDTEVP-RRPD---SLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCF 166

Query: 291 GPRMCIDDGR----VVSNFVAQALRKEPL--------TVYGDGKQTRSF 327
                  D R     +S      L K            VYG    T S+
Sbjct: 167 PKPK---DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASANTESW 212

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  146 bits (370), Expect = 3e-41
 Identities = 63/245 (25%), Positives = 97/245 (39%), Gaps = 40/245 (16%)

Query: 103 NSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG 162
           +S G +P G     +RI++TGGAG +GS+L++  + +G  ++V+DNF TG++E +     
Sbjct: 10  HSSGLVPRG---SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-- 64

Query: 163 NPNFELIRHDVVEPLLLE-------VDQIYHLA----CPASPVHYKFNPVKTIKTNVVGT 211
                +I   V +  LLE          + H A     P               TNV G+
Sbjct: 65  -AGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAED-------AATNVQGS 116

Query: 212 LNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT 270
           +N+   A + G  R L   T+  YG P   P          P    + Y   K   E   
Sbjct: 117 INVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDS-----PTAPFTSYGISKTAGEAFL 171

Query: 271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
           M       V V   R+ N  GPR+ I  G  +  F  +    +    +      R F  +
Sbjct: 172 MMS----DVPVVSLRLANVTGPRLAI--G-PIPTFYKRLKAGQK--CFCSD-TVRDFLDM 221

Query: 331 SDLVR 335
           SD + 
Sbjct: 222 SDFLA 226

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  145 bits (368), Expect = 4e-41
 Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 32/245 (13%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARG-------DSVIVVDNFFTGRKENVMHHFGNP 164
           L  +G+ I + G AG VG  L  RL+  G       +   ++D F             + 
Sbjct: 10  LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-----SG 64

Query: 165 NFELIRHDVVEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA 218
             +    D+  P   E       D I+HLA   S      +  K  + N+ GT  +    
Sbjct: 65  AVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAEL-DFDKGYRINLDGTRYLFDAI 123

Query: 219 KRVGA------RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD 272
           +          R + TS+  V+G PL +P  + +     P+   + Y   K   E L  D
Sbjct: 124 RIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH--TTPL---TSYGTQKAICELLLSD 178

Query: 273 YHRGAGVEVRIARIFNTYGPRMCIDDGR--VVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
           Y R    +    R+          +       SN + + L  +   +             
Sbjct: 179 YSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASP 238

Query: 331 SDLVR 335
              V 
Sbjct: 239 RSAVG 243

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  142 bits (359), Expect = 3e-39
 Identities = 57/279 (20%), Positives = 83/279 (29%), Gaps = 59/279 (21%)

Query: 113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-------------- 158
              G R++V GG G+ G      L  +   V +VDN      ++ +              
Sbjct: 8   HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDR 67

Query: 159 ----HHFGNPNFELIRHDVVEPLLLE-------VDQIYHLACPASP-----VHYKFNPVK 202
                     + EL   D+ +   L         D + H            +  +   V 
Sbjct: 68  ISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFG--EQRSAPYSMIDRSRAVY 125

Query: 203 TIKTNVVGTLNMLGLAKR--VGARFLLTSTSEVYGDPLQHPQKETY---------WGNVN 251
           T   NV+GTLN+L   K        +   T   YG P     +E Y              
Sbjct: 126 TQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTP-NIDIEEGYITITHNGRTDTLPY 184

Query: 252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM---------------CI 296
           P    S Y   K           +  G+          YG +                  
Sbjct: 185 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244

Query: 297 DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
             G  ++ F  QA    PLTVYG G QTR +  + D V+
Sbjct: 245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQ 283

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  137 bits (346), Expect = 1e-38
 Identities = 44/226 (19%), Positives = 74/226 (32%), Gaps = 33/226 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           R++VTG AG +G  + +RL    + + + D         +      PN E ++ D+    
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADL------SPLDPA--GPNEECVQCDLADAN 56

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            V  ++   D I HL      V   F  +  ++ N++G  N+   A+  G  R +  S++
Sbjct: 57  AVNAMVAGCDGIVHLG--GISVEKPFEQI--LQGNIIGLYNLYEAARAHGQPRIVFASSN 112

Query: 232 EVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
              G  P              P      Y   K   E L   Y    G E  + RI +  
Sbjct: 113 HTIGYYPQTERLGPDV-----PARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCT 167

Query: 291 GPRM------CIDDGRVVSNFVAQALRKEPL---TVYGDGKQTRSF 327
                              + +    R   L    V+G       +
Sbjct: 168 PEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGW 213

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  136 bits (344), Expect = 2e-37
 Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 35/249 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDV--- 173
           ++++TGG GF+GS+L    +++G  +IV DN    G  +N+       NFE +  D+   
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62

Query: 174 --VEPLLLE--VDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR--VGAR 224
             V  L+ +   D  +HL   A  V       NP    + NV GTLN+L   ++      
Sbjct: 63  NDVTRLITKYMPDSCFHL---AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 119

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEG------------KRTAETLTMD 272
            + +ST++VYGD L+  +          +   + YDE             K  A+   +D
Sbjct: 120 IIYSSTNKVYGD-LEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 178

Query: 273 YHRGAGVEVRIARIFNTYGPR-MCIDDGRVVSNFVAQALRK-----EPLTVYGDGKQTRS 326
           Y R  G+   + R  + YG R     D   V  F  +A+       +P T+ G+GKQ R 
Sbjct: 179 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 238

Query: 327 FQFVSDLVR 335
                D++ 
Sbjct: 239 VLHAEDMIS 247

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score =  113 bits (285), Expect = 4e-29
 Identities = 73/233 (31%), Positives = 106/233 (45%), Gaps = 30/233 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG------DSVIVVDNF-FTGRKENVMHHFGNPNFELIR 170
           R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    + 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 171 HDV-----VEPLLLEVDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNMLGLAKR 220
            D+     +   L  VD I H A  A S V              +TNV GT  +L  A  
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFA--AESHVDRSIA---GASVFTETNVQGTQTLLQCAVD 116

Query: 221 VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
            G  R +  ST++VYG  +        W   +P+   S Y   K  ++ +   YHR  G+
Sbjct: 117 AGVGRVVHVSTNQVYGS-IDSG----SWTESSPLEPNSPYAASKAGSDLVARAYHRTYGL 171

Query: 280 EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
           +VRI R  N YGP    +  +++  FV   L    L +YGDG   R +    D
Sbjct: 172 DVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  113 bits (284), Expect = 6e-29
 Identities = 37/225 (16%), Positives = 69/225 (30%), Gaps = 22/225 (9%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +  V G  G +G H    + A G  +++       R  + +        E    ++++  
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVL-----IHRPSSQIQRLAYLEPECRVAEMLDHA 69

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            LE     +D +   A             + + + +  T        +    R L   ++
Sbjct: 70  GLERALRGLDGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSA 127

Query: 232 EVYG-DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
                 P   P  E  + +  P G +S Y   K   +    +  R  G+ V I       
Sbjct: 128 YAMPRHPQGLPGHEGLFYDSLPSG-KSSYVLCKWALDEQAREQAR-NGLPVVIGIPGMVL 185

Query: 291 GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           G     D G      +      E +T Y  G   R+    ++  R
Sbjct: 186 GEL---DIGPTTGRVITAIGNGE-MTHYVAG--QRNVIDAAEAGR 224

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score =  110 bits (278), Expect = 6e-28
 Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 46/244 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV- 173
            I+VTGGAGF+GS+ V  +        V V+D   + G K N+         EL+  D+ 
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIA 64

Query: 174 ----VEPLLLEVDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 224
               V+ L  + D I H A  A S      +   +P   I TN +GT  +L  A++   R
Sbjct: 65  DAELVDKLAAKADAIVHYA--AESHNDNSLN---DPSPFIHTNFIGTYTLLEAARKYDIR 119

Query: 225 FLLTSTSEVYGD-PLQHPQKETYWGNV------NPIGVRSCYDEGKRTAETLTMDYHRGA 277
           F   ST EVYGD PL+        G              S Y   K  ++ +   + R  
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 179

Query: 278 GVEVRIARIFNTYG---------PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ 328
           GV+  I+   N YG         PR            +   L      +YG+GK  R + 
Sbjct: 180 GVKATISNCSNNYGPYQHIEKFIPRQ-----------ITNILAGIKPKLYGEGKNVRDWI 228

Query: 329 FVSD 332
             +D
Sbjct: 229 HTND 232

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score =  109 bits (275), Expect = 1e-27
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 47/240 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV- 173
           +++VTGG GF+GS+ +  ++ +     VI +D   +     N+     +P +  ++ DV 
Sbjct: 5   KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVA 64

Query: 174 ----VEPLLLEVDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNMLGLAKR--VG 222
               V+ L+ +VD + HLA  A S V        +P   + +NV+GT  +L   +R    
Sbjct: 65  DYELVKELVRKVDGVVHLA--AESHVDRSIS---SPEIFLHSNVIGTYTLLESIRRENPE 119

Query: 223 ARFLLTSTSEVYGDPLQHPQ-KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
            RF+  ST EVYGD +      E      + +   S Y   K  ++ L + + R   +  
Sbjct: 120 VRFVHVSTDEVYGD-ILKGSFTEN-----DRLMPSSPYSATKAASDMLVLGWTRTYNLNA 173

Query: 282 RIARIFNTYG---------PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
            I R  N YG         P+  I           +A     + +YG GK  R + +V D
Sbjct: 174 SITRCTNNYGPYQFPEKLIPKTII-----------RASLGLKIPIYGTGKNVRDWLYVED 222

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score =  105 bits (264), Expect = 5e-26
 Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 43/253 (16%)

Query: 104 SGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNF-FTGRKENVMHH 160
             G   L  +   + I+VTGGAGF+GS+ V  ++       +I  D   ++G   NV   
Sbjct: 12  DLGTENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI 71

Query: 161 FGNPNFELIRHDV-----VEPLLLE--VDQIYHLACPA-SPV----HYKFNPVKTIKTNV 208
             +PN+  ++ ++     +E ++ E  V  I + A  A S V        NP+    TNV
Sbjct: 72  QDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNFA--AESHVDRSIE---NPIPFYDTNV 126

Query: 209 VGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE 267
           +GT+ +L L K+    + +  ST EVYG  L        +    P+   S Y   K +A+
Sbjct: 127 IGTVTLLELVKKYPHIKLVQVSTDEVYGS-LGK---TGRFTEETPLAPNSPYSSSKASAD 182

Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPR--------MCIDDGRVVSNFVAQALRKEPLTVYG 319
            + + Y++   + V + R  N YGP         + +            AL  + L +YG
Sbjct: 183 MIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMV----------TNALEGKKLPLYG 232

Query: 320 DGKQTRSFQFVSD 332
           DG   R +  V+D
Sbjct: 233 DGLNVRDWLHVTD 245

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score = 99.5 bits (249), Expect = 6e-24
 Identities = 68/253 (26%), Positives = 104/253 (41%), Gaps = 54/253 (21%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDV-- 173
           +I++TGGAGF+GS +V  +I    D+V+ +D   + G  E++     +  +     D+  
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 174 ---VEPLLLE--VDQIYHLACPA-SPV----HYKFNPVKTIKTNVVGTLNML-------- 215
              +  +  +   D + HLA  A S V         P   I+TN+VGT  +L        
Sbjct: 62  SAEITRIFEQYQPDAVMHLA--AESHVDRSIT---GPAAFIETNIVGTYALLEVARKYWS 116

Query: 216 --GLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVN------PIGVRSCYDEGKRTAE 267
             G  K+   RF   ST EVYGD L HP +      +            S Y   K +++
Sbjct: 117 ALGEDKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSD 175

Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPR--------MCIDDGRVVSNFVAQALRKEPLTVYG 319
            L   + R  G+   +    N YGP         + I            AL  +PL +YG
Sbjct: 176 HLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVI----------LNALEGKPLPIYG 225

Query: 320 DGKQTRSFQFVSD 332
            G Q R + +V D
Sbjct: 226 KGDQIRDWLYVED 238

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 88.3 bits (220), Expect = 5e-20
 Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 44/227 (19%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           I++ GGAG++GSH V +L+  G SV+VVDN  TG ++ +         +    D+ +   
Sbjct: 4   ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI-----TEGAKFYNGDLRDKAF 58

Query: 179 LE-------VDQIYHLACPAS---------PVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
           L        ++ + H A  A          P+ Y  N       NV G L +L +     
Sbjct: 59  LRDVFTQENIEAVMHFA--ADSLVGVSMEKPLQYYNN-------NVYGALCLLEVMDEFK 109

Query: 223 A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEV 281
             +F+ +ST+  YG+       E            + Y E K   E +   Y + + +  
Sbjct: 110 VDKFIFSSTAATYGEVDVDLITEET-----MTNPTNTYGETKLAIEKMLHWYSQASNLRY 164

Query: 282 RIARIFNTYG--PRMCI-DDGRVVSN---FVAQAL--RKEPLTVYGD 320
           +I R FN  G  P   I +D R  ++    V Q    ++E + ++GD
Sbjct: 165 KIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGD 211

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 78.4 bits (194), Expect = 1e-16
 Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 25/187 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-----FELIRHD 172
           R ++TG AGFVG +L + L  +   V         +  NV     +        ++I   
Sbjct: 14  RALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISD- 72

Query: 173 VVEPLLLEVDQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--ARFLLT 228
            ++P     D I+HLA  A S V   + N   T  TNV GTL++L   +      R L  
Sbjct: 73  -IKP-----DYIFHLA--AKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTI 124

Query: 229 STSEVYG--DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
            +SE YG   P + P  E      N +   S Y   K +   L   Y +  G+++   R 
Sbjct: 125 GSSEEYGMILPEESPVSEE-----NQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRT 179

Query: 287 FNTYGPR 293
           FN  GP 
Sbjct: 180 FNHIGPG 186

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 74.4 bits (184), Expect = 4e-15
 Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 41/231 (17%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
            I+VTGGAG++GSH    L+A G  V++ DN    ++E +  +             DV +
Sbjct: 7   TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD 66

Query: 176 PLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV 221
              L        +    H A         A P+ Y  N       N+   L++L + +  
Sbjct: 67  ERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRN-------NLDSLLSLLRVMRER 119

Query: 222 GARFLLTSTS-EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE 280
             + ++ S+S  VYG P + P  ET+     P+   + Y + K  AE +  D    A   
Sbjct: 120 AVKRIVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVEA-ADPS 173

Query: 281 VRIA--RIFNTYG--PRMCI-DDGRVVSN----FVAQ-AL-RKEPLTVYGD 320
            R+A  R FN  G      I +D   + N    +VAQ A+ + E L V+G 
Sbjct: 174 WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGS 224

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 73.9 bits (182), Expect = 5e-15
 Identities = 38/177 (21%), Positives = 61/177 (34%), Gaps = 26/177 (14%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNPNFELIRHD 172
           +G  ++VTG  GFV SH+V++L+  G  V           +  N+   +           
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS---ASKLANLQKRWDAKYPGRFETA 66

Query: 173 VVEPLLLE---------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
           VVE +L +            + H+   AS V +     + +   + GTLN L  A    +
Sbjct: 67  VVEDMLKQGAYDEVIKGAAGVAHI---ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS 123

Query: 224 --RFLLT-STSEVYGDPLQHPQK---ETYWGNVNPIGVRSCYDEGKRTAETLTMDYH 274
             RF+LT ST                E  W   N   +       +   +     Y 
Sbjct: 124 VKRFVLTSSTVSALIPKPNVEGIYLDEKSW---NLESIDKAKTLPESDPQKSLWVYA 177

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 73.3 bits (180), Expect = 9e-15
 Identities = 51/244 (20%), Positives = 90/244 (36%), Gaps = 36/244 (14%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-------DNFFT--GRKENVMHHFGN-P 164
           +G R+ VTG  GF G  L   L   G +V           + F      + +    G+  
Sbjct: 8   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 67

Query: 165 NFELIRHDVVEPLLLEVDQIYHLACPASP-VH--YKFNPVKTIKTNVVGTLNMLGLAKRV 221
           +   +   + E    + + ++H+A  A P V   Y   PV+T  TNV+GT+ +L   + V
Sbjct: 68  DQNKLLESIRE---FQPEIVFHMA--AQPLVRLSYS-EPVETYSTNVMGTVYLLEAIRHV 121

Query: 222 G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY------ 273
           G     +  ++ + Y +                +G    Y   K  AE +T  Y      
Sbjct: 122 GGVKAVVNITSDKCYDNKEWIWGYREN----EAMGGYDPYSNSKGCAELVTSSYRNSFFN 177

Query: 274 ---HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
              +   G  V   R  N  G        R+V + +    + +P+ +  +    R +Q V
Sbjct: 178 PANYGQHGTAVATVRAGNVIGGGD-WALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHV 235

Query: 331 SDLV 334
            + +
Sbjct: 236 LEPL 239

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 71.7 bits (175), Expect = 4e-14
 Identities = 34/236 (14%), Positives = 66/236 (27%), Gaps = 22/236 (9%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---- 176
           + G  G +G+ L + L            +   R+        +     ++ D+ +P    
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA-WHEDNPINYVQCDISDPDDSQ 64

Query: 177 -LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSE 232
             L  +  + H+              +  + N     N+L              L +  +
Sbjct: 65  AKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 233 VYGDPLQHPQK----ETYWGNVNPIGVRSCYDEGKRTAET-LTMDYHRGAGVEVRIARIF 287
            Y  P +   K    +  +    P   R  Y       E  +  +  +  G+   + R  
Sbjct: 123 HYMGPFESYGKIESHDPPYTEDLP---RLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPG 179

Query: 288 NTYGPRMCIDDGRVVSNFVAQALRKE---PLTVYGDGKQTRSFQFVSDLVRLTETI 340
           N +G         V +  V  A+ K     L   G       +   SD   + E  
Sbjct: 180 NIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 69.0 bits (170), Expect = 2e-13
 Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 42/232 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
           R++VTGG+G++GSH   +L+  G  VI++DN    ++  +  +   G  +   +  D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 176 PLLLE-------VDQIYHLAC-------PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV 221
             L+        +D + H A           P+ Y  N       NV GTL ++   +  
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLISAMRAA 114

Query: 222 GARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG-VRSCYDEGKRTAETLTMDYHRGAGV 279
             +  + S+S  VYGD  + P  E++     P G  +S Y + K   E +  D  + A  
Sbjct: 115 NVKNFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQK-AQP 168

Query: 280 EVRIA--RIFNTYG--PRMCI-DDGRVVSN----FVAQ-AL-RKEPLTVYGD 320
           +  IA  R FN  G  P   + +D + + N    ++AQ A+ R++ L ++G+
Sbjct: 169 DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN 220

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 70.1 bits (172), Expect = 2e-13
 Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 44/240 (18%)

Query: 113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIR 170
           +     ++VTGGAG++GSH V  LI  G   +V DN      ++V  +      +     
Sbjct: 8   ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYE 67

Query: 171 HDVVEPLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTLNMLG 216
            D+ +   LE       +D + H A           P+ Y  N       N++GT+ +L 
Sbjct: 68  VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHN-------NILGTVVLLE 120

Query: 217 LAKRVGARFLLTSTSE-VYGDPLQHPQK----ETYWGNVNPIGVRSCYDEGKRTAETLTM 271
           L ++      + S+S  VYGD  + P      E       P+G  + Y   K   E +  
Sbjct: 121 LMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC-----PLGPTNPYGHTKYAIENILN 175

Query: 272 DYHRGAGVEVRIA--RIFNTYG--PRMCI-DDGRVVSN----FVAQ-AL-RKEPLTVYGD 320
           D +       + A  R FN  G  P   I +D   + N    ++AQ A+ R+E L ++GD
Sbjct: 176 DLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGD 235

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 68.4 bits (168), Expect = 3e-13
 Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 28/154 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
              V GG GFV S LV  L+ +G +V   V D      ++ V H         ++  +  
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRD---PDNQKKVSHLLELQELGDLK--IFR 65

Query: 176 PLLLE----------VDQIYHLACPASPVHYKF-NPVK-TIKTNVVGTLNMLGLAKRVGA 223
             L +           D ++H+   A+PVH+   +P    IK  + G +N++    R  +
Sbjct: 66  ADLTDELSFEAPIAGCDFVFHV---ATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKS 122

Query: 224 --RFLLT-STSEVYGDPLQHPQK---ETYWGNVN 251
             R +LT S + V  + L        E  W ++ 
Sbjct: 123 VKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE 156

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 66.3 bits (162), Expect = 7e-13
 Identities = 30/183 (16%), Positives = 55/183 (30%), Gaps = 24/183 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +IV+ G +GFVGS L++  + RG  V         R    +    N + ++ + DV    
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTA-----VVRHPEKI-KIENEHLKVKKADVSSLD 59

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            V  +    D +     P        N        +   L ++   K+ G  RFL+   +
Sbjct: 60  EVCEVCKGADAVISAFNPGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113

Query: 232 EVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG 291
                       ++     N           K   E       +   ++           
Sbjct: 114 GSLFIAPGLRLMDSGEVPENI------LPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR 167

Query: 292 PRM 294
           P +
Sbjct: 168 PGV 170

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 67.5 bits (166), Expect = 7e-13
 Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 48/238 (20%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--------MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +           +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 170 RHDVVEPLLLE-------VDQIYHLA-------CPASPVHYKFNPVKTIKTNVVGTLNML 215
             D+++   L+          + H A           P+ Y          N+ GT+ +L
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRV-------NLTGTIQLL 116

Query: 216 GLAKRVGARFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSC-YDEGKRTAETLTMDY 273
            + K  G + L+ S+S  VYG+P   P  E +     P G  +  Y + K   E +  D 
Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDL 171

Query: 274 HRGAGVEVRIA--RIFNTYG--PRMCI-DDGRVVSN----FVAQ-AL-RKEPLTVYGD 320
            + A         R FN  G     CI +D + + N    +V+Q A+ R+E L V+G+
Sbjct: 172 CQ-ADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN 228

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 67.7 bits (166), Expect = 7e-13
 Identities = 45/221 (20%), Positives = 73/221 (33%), Gaps = 70/221 (31%)

Query: 118 RIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHHFGNPNF---------- 166
           R++V GGAG++GSH V  L+     SV++VD+      ++                    
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 167 --------ELIRHDVVEPLLLE--------VDQIYHLACPAS---------PVHYKFNPV 201
                    L   DV     L         +D + H+   A          P+ Y  N  
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMC--AFLAVGESVRDPLKYYDN-- 119

Query: 202 KTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQ-------------HPQKETYW 247
                NVVG L +L         + + +S++ ++G+P                 +     
Sbjct: 120 -----NVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPE-- 172

Query: 248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
              +P      Y E K  AE +  D     G++    R FN
Sbjct: 173 ---SP------YGESKLIAERMIRDCAEAYGIKGICLRYFN 204

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 63.8 bits (155), Expect = 2e-11
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 45/211 (21%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV------DNFFTGRKENVMHHFGNPNFEL 168
           +   +++TG  GF+G +LV  L+ R D    +      ++    R   +   F + + EL
Sbjct: 72  ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPEL 130

Query: 169 IRH--------------DVVEP-----------LLLEVDQIYHLACPASPVHYKFNP-VK 202
           +RH              D  EP           L   VD I   A   + V+    P  +
Sbjct: 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSA---AMVN--AFPYHE 185

Query: 203 TIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYG-DPLQHPQKETYWGNVNP-----IGV 255
               NV GT  ++ +A       F   ST++V          ++     ++P      G 
Sbjct: 186 LFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGW 245

Query: 256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARI 286
              Y   K   E L  + +    + V + R 
Sbjct: 246 AGGYGTSKWAGEVLLREANDLCALPVAVFRC 276

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 22/151 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNP----NFELIRH 171
           R+ VTGG GF+GS ++  L+  G SV   +  +    RK +V      P           
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRAD--PERKRDVSFLTNLPGASEKLHFFNA 60

Query: 172 DVVEPLLLE-----VDQIYHLACPASPVHYKF--NPVKTIKTNVVGTLNMLGLAKRVGA- 223
           D+  P            I+H    ASP+ +          K  V G L +L         
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHT---ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTV 117

Query: 224 -RFLLTST--SEVYGDPLQHPQKETYWGNVN 251
            RF+ TS+  +  +    +    E+ W +V+
Sbjct: 118 KRFIYTSSGSAVSFNGKDKDVLDESDWSDVD 148

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 23/154 (14%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI--VVDNFFTGRKENVMHHFGNP----NFEL 168
           +   + VTG +GF+GS LV RL+ RG +V   V D       + V H    P    +  L
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRD---PTNVKKVKHLLDLPKAETHLTL 60

Query: 169 IRHDVVEPLLLE-----VDQIYHLACPASPVHYKF-NPVK-TIKTNVVGTLNMLGLAKRV 221
            + D+ +    +        ++H+   A+P+ ++  +P    IK  + G L ++      
Sbjct: 61  WKADLADEGSFDEAIKGCTGVFHV---ATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA 117

Query: 222 GA--RFLLT-STSEVYGDPLQ-HPQKETYWGNVN 251
               R + T S   V     Q     E+ W ++ 
Sbjct: 118 KTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDME 151

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 13/134 (9%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH 171
           L  +G+R++V G  G V  +L+  L  +G   +         +E           +++  
Sbjct: 17  LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVA----MVRNEEQGPELRERGASDIVVA 72

Query: 172 DVVEPL---LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 227
           ++ E        +D +   A  + P        KTI  ++ G +  +  A++ G  RF++
Sbjct: 73  NLEEDFSHAFASIDAVVFAAG-SGP---HTGADKTILIDLWGAIKTIQEAEKRGIKRFIM 128

Query: 228 TSTSEVYGDPLQHP 241
            S+     DP Q P
Sbjct: 129 VSSVGT-VDPDQGP 141

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 56.1 bits (135), Expect = 2e-09
 Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 15/175 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I + G  G  GS +++    RG  V  +      R    +    + +  +++ D+ +  
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIV-----RNAGKITQT-HKDINILQKDIFDLT 55

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
           L        L+     V          + +V    +++ +     +  LL          
Sbjct: 56  LS------DLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQI 109

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
            +          +        Y   +  A+ L       A            + P
Sbjct: 110 DEDGNTLLESKGLRE---APYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEP 161

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 20/140 (14%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           VTG  G  G++L   L+ +G  V  +V    +    R           + +    D+ + 
Sbjct: 19  VTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR---ELGIEGDIQYEDGDMADA 75

Query: 177 -----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--ARF 225
                 +++    ++Y+LA  A S V   +  PV T   + +G  ++L   ++     RF
Sbjct: 76  CSVQRAVIKAQPQEVYNLA--AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 133

Query: 226 LLTSTSEVYGDPLQHPQKET 245
              STSE++G      Q E 
Sbjct: 134 YQASTSEMFGLIQAERQDEN 153

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 52.3 bits (126), Expect = 3e-08
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 18/130 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +I + G  G  G   + + +  G  V V+      R  + +   G     ++  DV    
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVL-----VRDSSRLPSEGPRPAHVVVGDVLQAA 59

Query: 174 -VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 231
            V+  +   D +  L           N +        G  N++   K  G  + +  +++
Sbjct: 60  DVDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112

Query: 232 EVYGDPLQHP 241
            +  DP + P
Sbjct: 113 FLLWDPTKVP 122

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 51.6 bits (123), Expect = 7e-08
 Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 16/129 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHD---VV 174
           +I V G  G  GS +V     RG  V+ V      R               +  +   + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAV-----VRDPQKAADRLGATVATLVKEPLVLT 56

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV 233
           E  L  VD +             +        ++    +++ L +        +  ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRGY-------LHLDFATHLVSLLRNSDTLAVFILGSASL 109

Query: 234 YGDPLQHPQ 242
                 HP 
Sbjct: 110 AMPGADHPM 118

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 51.2 bits (123), Expect = 8e-08
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 22/120 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
           +I + G  G VG  L+  L      +         RK   +  +   N + +  DV    
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAG-----ARKVEQVPQY--NNVKAVHFDVDWTP 54

Query: 174 --VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST 230
             +   L  +D I +++               +K ++ G + ++  A++    RF+L ST
Sbjct: 55  EEMAKQLHGMDAIINVS--------GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 375

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 28/167 (16%)

Query: 101 AVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKEN 156
           +     K   G  R     ++TG  G  GS+L + L+ +G  V  IV    +F TGR E+
Sbjct: 11  SSGRENKYFQGHMRN--VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEH 68

Query: 157 VM---HHFGNPNFELIRHDVVEP-----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTI 204
           +          N +L   D+ +      ++ EV   +IY+L   A S V   F     T 
Sbjct: 69  LYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLG--AQSHVKISFDLAEYTA 126

Query: 205 KTNVVGTLNML------GLAKRVGARFLLTSTSEVYGDPLQHPQKET 245
             + VGTL +L      GL   V  +F   STSE+YG   + PQKET
Sbjct: 127 DVDGVGTLRLLDAVKTCGLINSV--KFYQASTSELYGKVQEIPQKET 171

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 23/131 (17%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVV---DNFFTGRKENVM-HHFGNPNFELI 169
               I++TGG G  G   V +++   +   I+V   D      K++ M   F +P     
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDEL----KQSEMAMEFNDPRMRFF 75

Query: 170 RHDV-----VEPLLLEVDQIYHLAC----PASPVHYKFNPVKTIKTNVVGTLNMLGLAKR 220
             DV     +   L  VD   H A     P +    ++NP++ IKTN++G  N++    +
Sbjct: 76  IGDVRDLERLNYALEGVDICIHAAALKHVPIA----EYNPLECIKTNIMGASNVINACLK 131

Query: 221 VG-ARFLLTST 230
              ++ +  ST
Sbjct: 132 NAISQVIALST 142

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 10/71 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            + +TG  G VG  L  +L   G  VI +      ++      F +P            L
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQL----VRKEPKPGKRFWDPLNPASD------L 198

Query: 178 LLEVDQIYHLA 188
           L   D + HLA
Sbjct: 199 LDGADVLVHLA 209

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 20/140 (14%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMHHFGNPNFELIRHDVVEP 176
           +TG  G  G++L   L+ +G  V         F + R +         + ++I  D++E 
Sbjct: 8   ITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK---ELGIENDVKIIHMDLLEF 64

Query: 177 -----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG--ARF 225
                 + +V  D++Y+LA  A S V   F  P+ T + + +G L +L   + V    +F
Sbjct: 65  SNIIRTIEKVQPDEVYNLA--AQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKF 122

Query: 226 LLTSTSEVYGDPLQHPQKET 245
              STSE++G   + PQ E 
Sbjct: 123 YQASTSEMFGKVQEIPQTEK 142

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 Length = 372

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 25/146 (17%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVMH--HFGNPNFELIRHDVV 174
           +TG  G  GS+L + L+ +G  V  I     +F T R +++    H  NP F L   D+ 
Sbjct: 6   ITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLS 65

Query: 175 EP-----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNML------GLAK 219
           +      +L EV  D++Y+L   A S V   F +P  T   + +GTL +L      GL K
Sbjct: 66  DTSNLTRILREVQPDEVYNLG--AMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123

Query: 220 RVGARFLLTSTSEVYGDPLQHPQKET 245
           +   RF   STSE+YG   + PQKET
Sbjct: 124 KT--RFYQASTSELYGLVQEIPQKET 147

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* Length = 381

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 25/147 (17%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSV--IV--VDNFFTGRKENVM---HHFGNPNFELIRHDV 173
           +TG  G  GS+L + L+ +G  V  ++    NF T R  ++    H+      +L   D+
Sbjct: 33  ITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADL 92

Query: 174 VEP-----LLLEV--DQIYHLACPA-SPVHYKF-NPVKTIKTNVVGTLNML------GLA 218
            +       +  +  D++Y+LA  A S V   F  P  T      G L +L       + 
Sbjct: 93  TDASSLRRWIDVIKPDEVYNLA--AQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTID 150

Query: 219 KRVGARFLLTSTSEVYGDPLQHPQKET 245
                ++    +SE++G     PQ ET
Sbjct: 151 SGRTVKYYQAGSSEMFGS-TPPPQSET 176

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 35/205 (17%), Positives = 59/205 (28%), Gaps = 40/205 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT----GRKENVMHHFGNPNFELIRHDV 173
           +I++ G  G +G  L  RL A+G  V  +              V     +    + R D 
Sbjct: 5   KILIAG-CGDLGLELARRLTAQGHEVTGL----RRSAQPMPAGVQTLIAD----VTRPDT 55

Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE 232
           +  ++    +I      AS    +++      + V G  N L   +          S++ 
Sbjct: 56  LASIVHLRPEILVYCVAAS----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG 111

Query: 233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP 292
           VYG  ++    E                +    AE L       A     I R    YGP
Sbjct: 112 VYGQEVEEWLDEDTP--PIAKDFSG---KRMLEAEAL------LAAYSSTILRFSGIYGP 160

Query: 293 -----------RMCIDDGRVVSNFV 306
                                +N +
Sbjct: 161 GRLRMIRQAQTPEQWPARNAWTNRI 185

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 16/124 (12%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHD 172
           +   + + G +G  G  L+  ++ +G    V ++     GR++         N      D
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLI-----GRRKLTFDEEAYKNVNQEVVD 71

Query: 173 V-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFL 226
                         D  +           K      ++ +    L    LAK  G   F 
Sbjct: 72  FEKLDDYASAFQGHDVGFCCLG---TTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFN 128

Query: 227 LTST 230
           L S+
Sbjct: 129 LLSS 132

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 45.6 bits (108), Expect = 8e-06
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 23/132 (17%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            ++VTG +G  G  +  +L    D  +        R        G    ++   D+ +  
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKG---LVRSAQGKEKIG-GEADVFIGDITDAD 61

Query: 178 LLE-----VDQIYHLA-------------CPASPVHYKFNPVKTIKTNVVGTLNMLGLAK 219
            +      +D +  L                  P     +     + + +G  N +  AK
Sbjct: 62  SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121

Query: 220 RVG-ARFLLTST 230
             G    ++  +
Sbjct: 122 VAGVKHIVVVGS 133

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 42/238 (17%), Positives = 78/238 (32%), Gaps = 48/238 (20%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVD--NFFTGRKENVMHHFGNPNFELIRHDVVE 175
           R++VTG  G +G  +           +           ++            L+  + V 
Sbjct: 4   RVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQ----------VNLLDSNAVH 53

Query: 176 PLLLEV--DQIYHLACPASPVHYKF------NPVKTIKTNVVGTLNMLGLAKRVGARFLL 227
            ++ +     I H  C A     +        P    + NV  + N+   A  VGA  + 
Sbjct: 54  HIIHDFQPHVIVH--CAA----ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIY 107

Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            S+  V+ D    P +E       P+ +   Y + K   E   ++ + GA V +RI  + 
Sbjct: 108 ISSDYVF-DGTNPPYREE--DIPAPLNL---YGKTKLDGEKAVLENNLGAAV-LRIPIL- 159

Query: 288 NTYGPRMCIDDGRVVSNFVAQALRK-----EPLTVYGDGKQTRSFQFVSDLVRLTETI 340
             YG        ++  + V     K     +   +     Q R    V D+  +   +
Sbjct: 160 --YGEV-----EKLEESAVTVMFDKVQFSNKSANMDHW--QQRFPTHVKDVATVCRQL 208

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 11/60 (18%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
           R+++ G  G  G HL+DR+++      VI        RK    H    P  +     + E
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAKVIAP-----ARKALAEH----PRLDNPVGPLAE 57

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 17/126 (13%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            +++ G  G +  H++++L  +      +      R+   +H     N ++I  DV+   
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTL----FARQPAKIHKPYPTNSQIIMGDVLNHA 80

Query: 178 LLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTS 231
            L+      D +Y                 T +   +   +++   K     R +   + 
Sbjct: 81  ALKQAMQGQDIVYANL--------------TGEDLDIQANSVIAAMKACDVKRLIFVLSL 126

Query: 232 EVYGDP 237
            +Y + 
Sbjct: 127 GIYDEV 132

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 40/199 (20%), Positives = 56/199 (28%), Gaps = 43/199 (21%)

Query: 124 GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQ 183
           G G+    L   L  +G  +I      T R  + M        E +     EP L  V  
Sbjct: 12  GHGYTARVLSRALAPQGWRIIG-----TSRNPDQMEAIRASGAEPLLWPGEEPSLDGVT- 65

Query: 184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQ 239
             HL    +P     +PV          L  LG      A         ST+ VYGD   
Sbjct: 66  --HLLISTAPDSGG-DPV----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDG 112

Query: 240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGP------- 292
               ET    + P   R       R        +     + + + R+   YGP       
Sbjct: 113 AWVDETTP--LTPTAARG------RWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSK 164

Query: 293 -----RMCIDDGRVVSNFV 306
                   I     V + +
Sbjct: 165 LGKGGIRRIIKPGQVFSRI 183

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 23/176 (13%), Positives = 46/176 (26%), Gaps = 37/176 (21%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVV 174
            I + G AG +   L   L+   D  I +     GR+           +    +I     
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL----YGRQLKTRIPPEIIDHERVTVIEGSFQ 62

Query: 175 EPLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS 229
            P  LE      + ++                     +     +++    R   R ++  
Sbjct: 63  NPGXLEQAVTNAEVVFV----------------GAMESGSDMASIVKALSRXNIRRVIGV 106

Query: 230 TSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIAR 285
           +                        +   Y +G+R A     +  R + +   I R
Sbjct: 107 SMAGLSGEFPVA-----LEKWTFDNLPISYVQGERQAR----NVLRESNLNYTILR 153

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	340
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.98
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.98
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.98
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.97
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.97
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.97
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.97
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.97
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.97
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.97
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.97
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.97
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.97
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.97
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.96
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.96
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.96
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.96
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.96
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.96
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.95
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.95
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.95
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.95
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.95
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.93
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.92
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.91
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.91
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.91
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.9
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.9
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.9
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.9
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.9
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.9
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.89
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.89
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.89
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.89
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.89
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.89
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.89
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.88
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.88
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.88
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.88
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.88
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.88
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.88
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.88
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.88
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.88
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.88
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.88
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.88
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.88
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.88
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.88
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.88
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.88
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.88
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.88
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.88
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.87
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.87
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.87
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.87
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.87
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.87
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.87
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.87
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.87
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.87
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.87
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.87
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.87
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.87
1spx_A	278	Short-chain reductase family member (5L265); paral	99.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.87
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.87
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.87
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.87
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.87
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.87
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.87
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.87
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.87
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.87
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.87
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.87
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.87
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.87
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.87
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.87
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.87
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.87
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.87
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.86
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.86
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.86
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.86
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.86
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.86
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.86
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.86
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.86
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.86
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.86
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.86
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.86
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.86
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.86
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.86
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.86
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.86
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.86
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.86
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.86
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.86
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.86
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.86
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.86
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.86
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.86
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.86
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.86
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.86
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.86
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.86
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.86
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.86
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.86
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.86
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.86
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.86
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.86
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.86
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.86
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.86
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.85
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.85
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.85
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.85
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.85
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.85
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.85
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.85
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.85
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.85
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.85
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.85
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.85
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.85
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.85
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.85
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.85
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.85
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.85
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.85
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.85
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.85
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.85
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.85
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.85
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.85
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.85
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.85
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.85
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.85
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.85
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.85
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.84
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.84
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.84
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.84
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.84
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.84
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.84
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.84
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.84
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.84
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.84
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.84
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.84
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.83
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.83
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.83
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.83
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.83
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.83
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.83
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.83
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.83
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.83
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.83
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.83
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.82
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.82
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.82
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.82
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.82
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.82
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.81
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.81
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.81
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.81
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.81
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.81
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.81
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.81
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.81
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.81
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.81
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.8
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.8
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.79
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.79
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.79
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.78
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.78
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.77
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.77
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.77
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.77
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.76
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.73
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.72
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.71
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.68
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.68
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.67
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.64
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.62
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.61
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.58
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.55
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.54
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.52
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.49
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.46
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.45
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.43
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.43
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.15
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.13
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.11
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.9
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.86
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.84
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.8
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.48
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.48
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.45
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.45
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.4
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.35
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.3
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.2
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.11
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.08
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.07
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.06
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.96
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.89
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.87
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.84
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.84
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.79
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.79
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.78
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.76
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.76
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.74
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.7
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.7
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.69
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.66
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.65
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.63
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.63
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.62
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.6
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.56
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.54
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.45
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.45
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.45
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.42
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.41
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.41
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.4
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.4
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.39
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.39
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.38
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.37
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.36
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.35
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.34
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.34
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.33
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.29
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.29
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.29
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.28
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.26
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.26
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.24
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.24
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.23
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.22
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.22
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.2
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.19
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.17
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.17
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.16
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.13
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.12
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.12
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.12
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.11
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.06
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.04
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.04
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.04
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.03
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.02
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.01
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.0
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.98
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.97
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.97
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.97
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.96
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.93
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.93
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.88
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.83
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.82
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.8
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.8
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.76
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	96.74
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.69
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.69
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.69
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.68
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.63
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.63
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.62
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.6
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.6
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.59
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.55
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.54
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.54
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.5
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.5
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.5
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.49
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.44
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.42
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.41
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.4
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.37
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.34
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.33
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	96.33
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.32
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.28
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.27
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.26
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.25
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.25
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.23
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.21
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.21
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	96.13
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.11
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.1
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.09
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.09
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.08
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.06
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	96.04
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.04
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.03
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.01
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.01
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.98
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.97
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.95
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.94
3cmm_A	1015	Ubiquitin-activating enzyme E1 1; UBA1, protein tu	95.93
1tt5_A	531	APPBP1, amyloid protein-binding protein 1; cell cy	95.91
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	95.91
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.89
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	95.88
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	95.88
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.85
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.85
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.84
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	95.83
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	95.81
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	95.77
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.75
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.74
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.74
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.7
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.69
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	95.68
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.67
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.65
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	95.61
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.6
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.56
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	95.56
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.53
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.53
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	95.49
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	95.48
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.47
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.46
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	95.44
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.44
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.44
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.4

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=8e-36  Score=278.44  Aligned_cols=227  Identities=70%  Similarity=1.141  Sum_probs=192.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      .+++|+|||||||||||++|+++|+++|++|++++|................+++++.+|+.++.+.++|+|||+||...
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~  103 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPAS  103 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCS
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECccccC
Confidence            35678999999999999999999999999999999975443333322223457899999999998999999999999754


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD  272 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~  272 (340)
                      ...+..++...+++|+.++.+++++|++.+++|||+||.++||.....+.+|++|....+..+.+.|+.+|+.+|.+++.
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  183 (343)
T 2b69_A          104 PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYA  183 (343)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHH
Confidence            33344567888999999999999999998889999999999998777788998877666777778999999999999999


Q ss_pred             HHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          273 YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       273 ~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++++.+++++++||+++||++.......++..++..+++++++.+++++++.++|+|++|+|++++.
T Consensus       184 ~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          184 YMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            9888899999999999999986444456788888889999999889999999999999999999865

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2.6e-35  Score=275.55  Aligned_cols=222  Identities=28%  Similarity=0.410  Sum_probs=187.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC------CceEEeeCccccc-----ccCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN------PNFELIRHDVVEP-----LLLEV  181 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~------~~~~~~~~D~~~~-----~~~~~  181 (340)
                      .+++|+|||||||||||++|+++|+++|++|++++|...............      .+++++.+|+.+.     .+.++
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV  101 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence            456789999999999999999999999999999999765443322211111      5788999998764     45689


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHH
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |+|||+||.........++...+++|+.++.+++++|++.++ +|||+||+++||.....+++|+     .+..|.+.|+
T Consensus       102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~  176 (351)
T 3ruf_A          102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEE-----NIGNPLSPYA  176 (351)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHH
T ss_pred             CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccC-----CCCCCCChhH
Confidence            999999996543334557788999999999999999999997 9999999999998888888888     5667779999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      .+|+.+|.+++.++++.+++++++||++|||++....  ...++..++..+.+++++.+++++++.++|+|++|+|++++
T Consensus       177 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~  256 (351)
T 3ruf_A          177 VTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNI  256 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHH
Confidence            9999999999999988899999999999999975432  12678889999999999999999999999999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       257 ~  257 (351)
T 3ruf_A          257 L  257 (351)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=1.7e-34  Score=269.56  Aligned_cols=220  Identities=28%  Similarity=0.449  Sum_probs=178.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCc-ccccccccCCCceEEeeCcccccc-----cCC--CC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPL-----LLE--VD  182 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~-----~~~--~D  182 (340)
                      .+++|+|||||||||||++|+++|+++|  ++|++++|..... ...+.......+++++.+|+.+..     +.+  +|
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            4567899999999999999999999999  6888888865322 223332333468899999997752     334  99


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCC-CCCCCCCCCCCCCCCCCCCChHH
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~-~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      +|||+||.........++...+++|+.++.+++++|++.++ +|||+||.++|+.. ...+++|+     .+..|.+.|+
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~-----~~~~p~~~Y~  175 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-----TPLAPNSPYS  175 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT-----SCCCCCSHHH
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC-----CCCCCCChhH
Confidence            99999997655545667888999999999999999999997 79999999999986 45577777     5667789999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|+.+|.+++.++++.+++++++||++|||++.  ....++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       176 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  252 (346)
T 4egb_A          176 SSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ--YPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDV  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC--CTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC--CccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHH
Confidence            9999999999999988899999999999999975  3346788899999999999999999999999999999999875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3.7e-34  Score=263.32  Aligned_cols=209  Identities=38%  Similarity=0.594  Sum_probs=174.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc----cCCCCEEEEcccCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----LLEVDQIYHLACPAS  192 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----~~~~D~Vih~Ag~~~  192 (340)
                      |+|||||||||||++|+++|+++|++|++++|......+..     ...++++.+|+.+..    +.+ |+|||+||...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~   74 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPE   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHHHHhhcCC-CEEEECCCCCC
Confidence            58999999999999999999999999999999765433222     346778888887653    334 99999999755


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                      ......++...+++|+.++.+++++|++.++ +|||+||.++||.....+.+|+     .+..+.+.|+.+|+.+|.+++
T Consensus        75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE-----EPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC-----CCCCCCChHHHHHHHHHHHHH
Confidence            5556677889999999999999999999987 8999999999998887788887     566778999999999999999


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhC-CCeEEecCCceeEccccHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .++++.+++++++||+++||++.   ...++..++..+.++ ..+.+++++++.++|+|++|+|++++.
T Consensus       150 ~~~~~~g~~~~~lrp~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  215 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANVVGPRL---RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLA  215 (312)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTC---CSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHH
T ss_pred             HHHHHhCCCEEEEeeccccCcCC---CCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHH
Confidence            99988899999999999999974   345677788888877 566788999999999999999999875

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.1e-33  Score=260.43  Aligned_cols=205  Identities=24%  Similarity=0.352  Sum_probs=175.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccc----ccccCCCCEEEEcccCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV----EPLLLEVDQIYHLACPA  191 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~----~~~~~~~D~Vih~Ag~~  191 (340)
                      +|+|||||||||||++|+++|+++|++|++++|. +.... +      .+++++.+|+.    ...+.++|+|||+|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~-~------~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~   73 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNKA-I------NDYEYRVSDYTLEDLINQLNDVDAVVHLAATR   73 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCCHHHHHHHTTTCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCccc-C------CceEEEEccccHHHHHHhhcCCCEEEEccccC
Confidence            4699999999999999999999999999999997 22222 2      16778888876    22466899999999975


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                      ...    ++...+++|+.++.+++++|++.++ +|||+||.++||.....+++|+     .+..|.+.|+.+|+.+|.++
T Consensus        74 ~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~  144 (311)
T 3m2p_A           74 GSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEK-----ELPLPDLMYGVSKLACEHIG  144 (311)
T ss_dssp             CSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTT-----SCCCCSSHHHHHHHHHHHHH
T ss_pred             CCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCchhHHHHHHHHHHH
Confidence            432    6777889999999999999999997 7999999999998887888888     56677899999999999999


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +.++++.+++++++||+++||++..  ...++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       145 ~~~~~~~g~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~  211 (311)
T 3m2p_A          145 NIYSRKKGLCIKNLRFAHLYGFNEK--NNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIY  211 (311)
T ss_dssp             HHHHHHSCCEEEEEEECEEECSCC----CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHcCCCEEEEeeCceeCcCCC--CCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHH
Confidence            9998888999999999999999753  226788899999999999998999999999999999999875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.4e-34  Score=265.20  Aligned_cols=214  Identities=34%  Similarity=0.526  Sum_probs=178.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC---CcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT---GRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .++|+|||||||||||++|+++|+++|++|++++|...   .....+.......+++++.+|+.     ++|+|||+||.
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~d~vi~~a~~   79 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----DVRLVYHLASH   79 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----TEEEEEECCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----cCCEEEECCcc
Confidence            45789999999999999999999999999999999765   22222322223345666666665     79999999997


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ........++...++ |+.++.+++++|++.++ +|||+||.++|+.....+.+|+     .+..+.+.|+.+|+.+|.+
T Consensus        80 ~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           80 KSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPED-----SPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             CCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHH
T ss_pred             CChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHHHHH
Confidence            543334455666777 99999999999999996 9999999999998877788887     5667789999999999999


Q ss_pred             HHHHHHhhCC-cEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          270 TMDYHRGAGV-EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       270 v~~~~~~~gi-~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      ++.+++++++ +++++||+++||++..  ...++..++..+.+++++.+++++++.++|+|++|+|++++.+
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~  223 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGER--PDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVAL  223 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCC--TTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHG
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCC--CCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHH
Confidence            9999988899 9999999999999753  3567888999999999999999999999999999999998753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=7.4e-34  Score=261.72  Aligned_cols=210  Identities=32%  Similarity=0.505  Sum_probs=174.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc----ccCCCCEEEEcccCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP----LLLEVDQIYHLACPA  191 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~D~Vih~Ag~~  191 (340)
                      ||+|||||||||||++|+++|+++| .|+++++......+..     ...++++.+|+.+.    .+.++|+|||+|+..
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~   74 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAADDIKDYLKGAEEVWHIAANP   74 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTTSCCHHHHTTCSEEEECCCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCChHHHHHHhcCCCEEEECCCCC
Confidence            4689999999999999999999999 5666665433322221     34677888888663    345899999999975


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                      .......++...+++|+.++.+++++|++.++ +|||+||.++||.....+.+|+     .+..+.+.|+.+|+.+|.++
T Consensus        75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e~~~  149 (313)
T 3ehe_A           75 DVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED-----YPTHPISLYGASKLACEALI  149 (313)
T ss_dssp             CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHHH
T ss_pred             ChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCC-----CCCCCCCHHHHHHHHHHHHH
Confidence            54456678899999999999999999999987 9999999999998877788887     56677789999999999999


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhC-CCeEEecCCceeEccccHHHHHHHHHh
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +.++.+++++++++||++|||++.   ...++..++..+.++ .++.+++++++.++|+|++|+|++++.
T Consensus       150 ~~~~~~~g~~~~ilRp~~v~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  216 (313)
T 3ehe_A          150 ESYCHTFDMQAWIYRFANVIGRRS---THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLF  216 (313)
T ss_dssp             HHHHHHTTCEEEEEECSCEESTTC---CCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHhcCCCEEEEeeccccCcCC---CcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHH
Confidence            999988999999999999999974   346777888888877 567788999999999999999999875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=6e-34  Score=268.51  Aligned_cols=222  Identities=23%  Similarity=0.374  Sum_probs=183.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCccc-cc-----ccCCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-EP-----LLLEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~-----~~~~~D~Vi  185 (340)
                      .+++|+|||||||||||++|+++|+++ |++|++++|........    ....+++++.+|+. +.     .+.++|+||
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vi   96 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL----VKHERMHFFEGDITINKEWVEYHVKKCDVIL   96 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG----GGSTTEEEEECCTTTCHHHHHHHHHHCSEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh----ccCCCeEEEeCccCCCHHHHHHHhccCCEEE
Confidence            357789999999999999999999998 99999999975433221    12357899999998 53     345799999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCC-CCCCC-CCCChHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWG-NVNPI-GVRSCYDEGK  263 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~-~~~~~-~~~~~Y~~sK  263 (340)
                      |+||.........++...+++|+.++.+++++|++.+.+|||+||.++||.....+..|+++. ...+. .|.+.|+.+|
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK  176 (372)
T 3slg_A           97 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSK  176 (372)
T ss_dssp             ECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHH
T ss_pred             EcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHH
Confidence            999976544445677889999999999999999998889999999999998877788887532 11222 4567899999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCC------CCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHH
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI------DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      +.+|.+++.+.++ +++++++||++|||++...      ....++..++..+.+++++.+++++++.++|+|++|+|+++
T Consensus       177 ~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  255 (372)
T 3slg_A          177 QLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISAL  255 (372)
T ss_dssp             HHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHH
Confidence            9999999999887 9999999999999997532      13457888999999999999999999999999999999998


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      +.
T Consensus       256 ~~  257 (372)
T 3slg_A          256 MK  257 (372)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=4.7e-33  Score=259.82  Aligned_cols=217  Identities=26%  Similarity=0.372  Sum_probs=177.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~A  188 (340)
                      ||+||||||+||||++|+++|+++  |++|++++|............+...+++++.+|+.++     .+.++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            579999999999999999999999  8999999996532221111222235788899998764     456899999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCC------------CCCCCCCCCCCCCCCCC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQ------------HPQKETYWGNVNPIGVR  256 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~------------~~~~E~~~~~~~~~~~~  256 (340)
                      |.........++...+++|+.++.+++++|++.+++|||+||.++||....            .+++|+     .+..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-----~~~~~~  158 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-----TNYNPS  158 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-----SCCCCC
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCC-----CCCCCC
Confidence            964322233467789999999999999999998889999999999986532            455565     456677


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      +.|+.+|+.+|.+++.++.+++++++++||+++||++.  ....++..++..+.+++++.+++++++.++|+|++|+|++
T Consensus       159 ~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~  236 (348)
T 1oc2_A          159 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ--HIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG  236 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC--CTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCC--CccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHH
Confidence            89999999999999999888899999999999999975  2345777888888899888888999999999999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       237 ~~~  239 (348)
T 1oc2_A          237 VWA  239 (348)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=5.3e-33  Score=258.22  Aligned_cols=218  Identities=28%  Similarity=0.483  Sum_probs=175.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCC-cccccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      ++|+||||||+||||++|+++|+++|  ++|++++|.... ..+.+.......+++++.+|+.+.     .+.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            35789999999999999999999997  899999986422 222222111235788899998774     3458999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      +||.........++...+++|+.++.+++++|++.+.  +|||+||.++||.....+.+|+     .+..+.+.|+.+|+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~  156 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKA  156 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTT-----BCCCCCSHHHHHHH
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCC-----CCCCCCCccHHHHH
Confidence            9996432223346778999999999999999998873  9999999999998766677777     45566789999999


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++.++.+++++++++||++|||++.  ....++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       157 ~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  229 (336)
T 2hun_A          157 ASDMLVLGWTRTYNLNASITRCTNNYGPYQ--FPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIEL  229 (336)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEECEEESTTC--CTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEeeeeeeCcCC--CcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHH
Confidence            999999999888899999999999999975  2345677888888888888888999999999999999999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=5.9e-33  Score=260.97  Aligned_cols=218  Identities=25%  Similarity=0.377  Sum_probs=180.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHh--CCCeEEEEeCCCCCcc------c--ccccccCCCceEEeeCccccc-----
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIA--RGDSVIVVDNFFTGRK------E--NVMHHFGNPNFELIRHDVVEP-----  176 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~--~G~~V~~l~r~~~~~~------~--~~~~~~~~~~~~~~~~D~~~~-----  176 (340)
                      +.+++|+||||||+||||++|+++|++  +|++|++++|......      +  .........++.++.+|+.++     
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            356788999999999999999999999  9999999999654110      0  011112334678899999774     


Q ss_pred             c-cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          177 L-LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       177 ~-~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      . ..++|+|||+||....  ...++...+++|+.++.+++++|++.+++|||+||+++||.... +.+|+     .+..|
T Consensus        86 ~~~~~~D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~~~E~-----~~~~p  157 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-PNVVG-----KNESP  157 (362)
T ss_dssp             HTTSCCSEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-SBCTT-----SCCCC
T ss_pred             hhccCCCEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-CCCCC-----CCCCC
Confidence            2 5689999999995432  45678999999999999999999999989999999999998766 77887     56677


Q ss_pred             CChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEecCCceeEccccHHHH
Q 019470          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      .+.|+.+|+.+|.+++.++.+  ++++++||+++|||+.....  ..++..++..+.++.++.+++++++.++|+|++|+
T Consensus       158 ~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  235 (362)
T 3sxp_A          158 ENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDV  235 (362)
T ss_dssp             SSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHH
T ss_pred             CChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHH
Confidence            899999999999999988765  89999999999999864322  26788899999999988888999999999999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |++++.
T Consensus       236 a~ai~~  241 (362)
T 3sxp_A          236 IQANVK  241 (362)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.4e-32  Score=255.71  Aligned_cols=216  Identities=32%  Similarity=0.510  Sum_probs=177.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC---C---CeEEEEeCCCCC-cccccccccCCCceEEeeCccccc-----ccCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR---G---DSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~---G---~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~V  184 (340)
                      |+|||||||||||++|+++|+++   |   ++|++++|.... ..+.+.......+++++.+|+.++     .+.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            58999999999999999999997   8   999999996432 122222111235788899998764     35689999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      ||+||.........++...+++|+.++.+++++|++.++ +|||+||.++||.....+.+|+     .+..+.+.|+.+|
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASK  155 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCC-----CCCCCCCchHHHH
Confidence            999986432223346778999999999999999999987 9999999999997766677776     4556778999999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +.+|.+++.++++++++++++||+++||++.  ....++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  229 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQ--HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL  229 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTC--CTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCC--CCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHH
Confidence            9999999999888899999999999999975  2345777888888888888888999999999999999999865

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=4.2e-33  Score=260.88  Aligned_cols=222  Identities=27%  Similarity=0.370  Sum_probs=181.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccC---CCceEEeeCccccc-----ccCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFG---NPNFELIRHDVVEP-----LLLEV  181 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~---~~~~~~~~~D~~~~-----~~~~~  181 (340)
                      .+++|+|||||||||||++|+++|+++|++|++++|......+.+.   ..+.   ..+++++.+|+.+.     .+.++
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  103 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV  103 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence            4567899999999999999999999999999999997543222111   1111   24678889998764     45689


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHH
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |+|||+||.........++...+++|+.++.+++++|++.++ +|||+||.++|+.....+.+|+     .+..+.+.|+
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~-----~~~~~~~~Y~  178 (352)
T 1sb8_A          104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYA  178 (352)
T ss_dssp             SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHH
T ss_pred             CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCC-----CCCCCCChhH
Confidence            999999996432223356788999999999999999999986 8999999999998766677877     4556678999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      .+|+.+|.+++.++++.+++++++||++|||++....  ...++..++..+.+++++.+++++++.++|+|++|+|++++
T Consensus       179 ~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~  258 (352)
T 1sb8_A          179 VTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL  258 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHH
Confidence            9999999999999888899999999999999975322  12567788888889998888899999999999999999876


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       259 ~  259 (352)
T 1sb8_A          259 L  259 (352)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=3.3e-33  Score=260.91  Aligned_cols=210  Identities=27%  Similarity=0.328  Sum_probs=173.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .+.++|+|||||||||||++|+++|+++|++|++++|....           .++.++.+|+.+.     .+.++|+|||
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLH   83 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence            45678899999999999999999999999999999997543           3556777887664     4678999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccC--CCCCCCCCCCCCCCCCCCCCChHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGD--PLQHPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~--~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      +|+....  ....+...+++|+.++.+++++|++.++ +|||+||.++||.  ....+++|+     .+..+.+.|+.+|
T Consensus        84 ~A~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~-----~~~~~~~~Y~~sK  156 (347)
T 4id9_A           84 LGAFMSW--APADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED-----HPLCPNSPYGLTK  156 (347)
T ss_dssp             CCCCCCS--SGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT-----SCCCCCSHHHHHH
T ss_pred             CCcccCc--chhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC-----CCCCCCChHHHHH
Confidence            9986532  2234588999999999999999999997 9999999999998  556677777     5667779999999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCcee-------------CCCCCCC---------CccHHHHHHHHHHhCCCeEEecCC
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTY-------------GPRMCID---------DGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~-------------G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                      +.+|.+++.++++.+++++++||+++|             |++....         ...++..++..+..++++.+++++
T Consensus       157 ~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (347)
T 4id9_A          157 LLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN  236 (347)
T ss_dssp             HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC
T ss_pred             HHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC
Confidence            999999999998889999999999999             7753211         245677788888888898999999


Q ss_pred             ceeEcc----ccHHHHHHHHHh
Q 019470          322 KQTRSF----QFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~----v~v~Dva~a~~~  339 (340)
                      ++.++|    +|++|+|++++.
T Consensus       237 ~~~~~~~~~~i~v~Dva~ai~~  258 (347)
T 4id9_A          237 ENGRPFRMHITDTRDMVAGILL  258 (347)
T ss_dssp             TTCCBCEECEEEHHHHHHHHHH
T ss_pred             CcccCCccCcEeHHHHHHHHHH
Confidence            999999    999999999875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=2.1e-32  Score=252.58  Aligned_cols=210  Identities=30%  Similarity=0.407  Sum_probs=172.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih  186 (340)
                      .++|+||||||+||||++|+++|+++|++|++++|.... ..     +   +++++.+|+.++     .+.  ++|+|||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   80 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----P---NVEMISLDIMDSQRVKKVISDIKPDYIFH   80 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----T---TEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----c---eeeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            466799999999999999999999999999999997543 11     1   678888998764     233  3899999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccccCC--CCCCCCCCCCCCCCCCCCCChHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDP--LQHPQKETYWGNVNPIGVRSCYDEG  262 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~g~~--~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (340)
                      +||.........++...+++|+.++.+++++|++. ++ +|||+||.++|+..  ...+++|+     .+..+.+.|+.+
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~-----~~~~~~~~Y~~s  155 (321)
T 2pk3_A           81 LAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEE-----NQLRPMSPYGVS  155 (321)
T ss_dssp             CCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTT-----SCCBCCSHHHHH
T ss_pred             cCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCC-----CCCCCCCccHHH
Confidence            99975433344578889999999999999999876 44 99999999999876  56677777     455667899999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHh---C--CCeEEecCCceeEccccHHHHHHHH
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALR---K--EPLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      |+++|.+++.+++++|++++++||+++||++..  ...++..++..+.+   +  +++..++++++.++|+|++|+|+++
T Consensus       156 K~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~  233 (321)
T 2pk3_A          156 KASVGMLARQYVKAYGMDIIHTRTFNHIGPGQS--LGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAY  233 (321)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCC--TTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCC--CCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHH
Confidence            999999999998888999999999999999753  23466677777766   6  5778888889999999999999998


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      +.
T Consensus       234 ~~  235 (321)
T 2pk3_A          234 WL  235 (321)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=9.6e-33  Score=261.08  Aligned_cols=222  Identities=28%  Similarity=0.375  Sum_probs=172.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .+++|+|||||||||||++|+++|+++| ++|++++|......+.+.   ...+++++.+|+.++     .+.++|+|||
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih  105 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFH  105 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence            4578899999999999999999999999 999999997544322221   135788889998764     4568999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCcccccCCCCCCCC--CCCCCCCCCC-CCCChHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQK--ETYWGNVNPI-GVRSCYDE  261 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v~g~~~~~~~~--E~~~~~~~~~-~~~~~Y~~  261 (340)
                      +||.........++...+++|+.++.+++++|++. ++ +|||+||.++||.....+++  |++|.  .+. .+.+.|+.
T Consensus       106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~--~~~~~~~~~Y~~  183 (377)
T 2q1s_A          106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDI--VSLHNNDSPYSM  183 (377)
T ss_dssp             CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCC--CCSSCCCSHHHH
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccc--ccccCCCCchHH
Confidence            99864332233467889999999999999999998 76 99999999999987666777  77542  144 56689999


Q ss_pred             HHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC---------CCC--CccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM---------CID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      +|+.+|.+++.++++.+++++++||++|||++.         ...  ...++..++..+.+++++.+++++++.++|+|+
T Consensus       184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v  263 (377)
T 2q1s_A          184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFV  263 (377)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEH
Confidence            999999999999888899999999999999975         110  045778888888899888888888999999999


Q ss_pred             HHHHHH-HHh
Q 019470          331 SDLVRL-TET  339 (340)
Q Consensus       331 ~Dva~a-~~~  339 (340)
                      +|+|++ ++.
T Consensus       264 ~Dva~a~i~~  273 (377)
T 2q1s_A          264 EDVANGLIAC  273 (377)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            999999 764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=7e-33  Score=254.96  Aligned_cols=213  Identities=33%  Similarity=0.531  Sum_probs=173.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~Ag  189 (340)
                      |+||||||+||||++++++|+++|++|++++|......+.+    . .+++++.+|+.++     .+.  ++|+|||+|+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~----~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV----P-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS----C-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc----c-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            48999999999999999999999999999998543322211    1 3566778888764     234  7999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCc-ccccC-CCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGD-PLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~-~v~g~-~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      .........++...+++|+.|+.+++++|++.++ +||++||. ++||. ....+.+|+     .+..+.+.|+.+|+++
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~  150 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEET-----WPPRPKSPYAASKAAF  150 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCC-----CCCCCCChHHHHHHHH
Confidence            6432223456788999999999999999999886 99999998 89986 445566776     4555678999999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCCCeEEe-----cCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEPLTVY-----GDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |.+++.++++.+++++++||+++|||+..... ..++..++..+.++.++.++     +++++.++|+|++|+|++++.
T Consensus       151 e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  229 (311)
T 2p5y_A          151 EHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHAL  229 (311)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHH
Confidence            99999998888999999999999999754322 45677788888888888888     888899999999999999864

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.5e-32  Score=260.02  Aligned_cols=219  Identities=27%  Similarity=0.374  Sum_probs=177.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      +.++|+|||||||||||++|+++|+++|++|++++|........     ...+++++.+|+.+.     .+.++|+|||+
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~  100 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMENCLKVTEGVDHVFNL  100 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----ccCCceEEECCCCCHHHHHHHhCCCCEEEEC
Confidence            44678999999999999999999999999999999975432211     123578888888764     45689999999


Q ss_pred             ccCCCCCCC-cCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCC-----CCCCCCCCCCCCCCCCCChHH
Q 019470          188 ACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-----HPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       188 Ag~~~~~~~-~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~-----~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      ||......+ ..++...+++|+.++.+++++|++.++ +|||+||.++|+....     .+++|+++.   +..+.+.|+
T Consensus       101 A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~---~~~~~~~Y~  177 (379)
T 2c5a_A          101 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW---PAEPQDAFG  177 (379)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS---SBCCSSHHH
T ss_pred             ceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC---CCCCCChhH
Confidence            997543222 467888999999999999999999987 9999999999986432     335565321   445568999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHHHHH
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      .+|+.+|.+++.++++.+++++++||+++||++.....  ..++..++..+.++++ +.+++++++.++|+|++|+|+++
T Consensus       178 ~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai  257 (379)
T 2c5a_A          178 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV  257 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHH
Confidence            99999999999998888999999999999999754322  2367788888888876 88889999999999999999998


Q ss_pred             Hh
Q 019470          338 ET  339 (340)
Q Consensus       338 ~~  339 (340)
                      +.
T Consensus       258 ~~  259 (379)
T 2c5a_A          258 LR  259 (379)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.8e-32  Score=253.06  Aligned_cols=219  Identities=24%  Similarity=0.409  Sum_probs=177.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~Ag  189 (340)
                      |+|||||||||||++|+++|+++ |++|++++|.......    .....+++++.+|+.+.      .+.++|+|||+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~   76 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH----hhcCCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence            58999999999999999999998 8999999996543221    12235788999998762      2347999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCC-CCCC-CCCChHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN-VNPI-GVRSCYDEGKRTAE  267 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~-~~~~-~~~~~Y~~sK~~~E  267 (340)
                      ...+.....++...+++|+.++.+++++|++.+.+|||+||.++||.....+.+|+++.. ..+. .+.+.|+.+|+.+|
T Consensus        77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e  156 (345)
T 2bll_A           77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (345)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             ccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHH
Confidence            654322345677899999999999999999988899999999999987766777775431 1121 34568999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCC------CCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCI------DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+++.++++.+++++++||++|||++...      ....++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       157 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  234 (345)
T 2bll_A          157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR  234 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHH
Confidence            99999988889999999999999997532      1134677888888999999888999999999999999999875

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.1e-32  Score=251.14  Aligned_cols=210  Identities=24%  Similarity=0.309  Sum_probs=166.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCC--CCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLE--VDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~--~D~Vi  185 (340)
                      .+++|+|||||||||||++|+++|+++|+      +.  ..  .      ...++.+.+|+.+     ..+.+  +|+||
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~--~~--~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LP--GE--D------WVFVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CT--TC--E------EEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cc--cc--c------ccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            35788999999999999999999999998      11  00  0      0122333455544     34444  99999


Q ss_pred             EcccCCCCC-CCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC-hHHHH
Q 019470          186 HLACPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS-CYDEG  262 (340)
Q Consensus       186 h~Ag~~~~~-~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~-~Y~~s  262 (340)
                      |+||..... ....++...+++|+.++.+++++|++.++ +|||+||.++||.....+++|+++... +..+.+ .|+.+
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~-~~~p~~~~Y~~s  145 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG-PPHNSNFGYSYA  145 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS-CCCSSSHHHHHH
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC-CCCCCcchHHHH
Confidence            999974321 23457788999999999999999999997 899999999999988888888864322 334444 69999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHH----HHhCCCeEEecCCceeEccccHHHHHHH
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQ----ALRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      |+.+|.+++.++++.+++++++||+++||++....  ...++..++..    +.+++++.+++++++.++|+|++|+|++
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  225 (319)
T 4b8w_A          146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL  225 (319)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHH
Confidence            99999999999988899999999999999986432  24566777776    7889999999999999999999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       226 ~~~  228 (319)
T 4b8w_A          226 FIW  228 (319)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.6e-32  Score=251.80  Aligned_cols=220  Identities=26%  Similarity=0.400  Sum_probs=173.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc-----cC--CCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----LL--EVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----~~--~~D~Vi  185 (340)
                      ++|+||||||+||||++|+++|+++|++|++++|......+.....  ....++.++.+|+.++.     +.  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            3569999999999999999999999999999999765443322111  11346788889987642     33  799999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      |+||.........++...+++|+.++.+++++|++.++ +|||+||+++||.....+.+|+     .+..+.+.|+.+|+
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK~  158 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDET-----FPLSATNPYGQTKL  158 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTT-----SCCBCSSHHHHHHH
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCC-----CCCCCCChhHHHHH
Confidence            99997543334456778899999999999999999986 9999999999998888888887     56667789999999


Q ss_pred             HHHHHHHHHHHhhC-CcEEEEEeCceeCCCCCC------C--CccHHHHHHHHHHhC-CCeEEec------CCceeEccc
Q 019470          265 TAETLTMDYHRGAG-VEVRIARIFNTYGPRMCI------D--DGRVVSNFVAQALRK-EPLTVYG------DGKQTRSFQ  328 (340)
Q Consensus       265 ~~E~~v~~~~~~~g-i~~~ivRp~~i~G~~~~~------~--~~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~v  328 (340)
                      ++|.+++.++.+.+ ++++++||+++||++...      .  ...++..+......+ .++.+++      ++++.++|+
T Consensus       159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  238 (341)
T 3enk_A          159 MAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI  238 (341)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred             HHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence            99999999988775 999999999999995421      1  134555444433332 5667777      889999999


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      |++|+|++++.
T Consensus       239 ~v~Dva~a~~~  249 (341)
T 3enk_A          239 HVVDLARGHIA  249 (341)
T ss_dssp             EHHHHHHHHHH
T ss_pred             EHHHHHHHHHH
Confidence            99999999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-32  Score=251.19  Aligned_cols=221  Identities=22%  Similarity=0.244  Sum_probs=173.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCccccc-----ccC--CCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEP-----LLL--EVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~-----~~~--~~D~Vi  185 (340)
                      ..+|+||||||+||||++|+++|+++|++|++++|............+ ...+++++.+|+.+.     .+.  ++|+||
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi   91 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY   91 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence            356799999999999999999999999999999997554221111111 234678889998764     233  479999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC--CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      |+||.........++...+++|+.++.+++++|++.+  .+|||+||.++|+.....+.+|+     .+..+.+.|+.+|
T Consensus        92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK  166 (335)
T 1rpn_A           92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAK  166 (335)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHH
T ss_pred             ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcc-----cCCCCCChhHHHH
Confidence            9999644322345788899999999999999999987  38999999999998776677887     4556778999999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHHHHHHh
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +.+|.+++.++++++++++++||+++|||+...+. ...+..++..+.+++. ...++++++.++|+|++|+|++++.
T Consensus       167 ~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~  244 (335)
T 1rpn_A          167 LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL  244 (335)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHH
Confidence            99999999998888999999999999999753211 1235556666777763 4557888999999999999999875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=2e-32  Score=253.73  Aligned_cols=214  Identities=26%  Similarity=0.415  Sum_probs=170.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~A  188 (340)
                      ||+||||||+||||++|+++|+++|++|++++|......+.+    . .+++++.+|+.+.     .+.  ++|+|||+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a   75 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI----T-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA   75 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS----C-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhc----C-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence            479999999999999999999999999999998654332221    1 2678888888764     344  799999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      |.........++...+++|+.++.+++++|++.++ +|||+||.++|+.....+++|+     .+..+.+.|+.+|+.+|
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e  150 (330)
T 2c20_A           76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEE-----TMTNPTNTYGETKLAIE  150 (330)
T ss_dssp             CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCSSHHHHHHHHHH
T ss_pred             cccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcC-----CCCCCCChHHHHHHHHH
Confidence            86432223356788999999999999999999986 8999999999998777778887     45566789999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCC-------CCccHHHHHHHHHHhC-CCeEEec------CCceeEccccHHHH
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCI-------DDGRVVSNFVAQALRK-EPLTVYG------DGKQTRSFQFVSDL  333 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~------~g~~~~~~v~v~Dv  333 (340)
                      .+++.++++.+++++++||+++||++...       ....++..++.....+ ..+.+++      ++++.++|+|++|+
T Consensus       151 ~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dv  230 (330)
T 2c20_A          151 KMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDL  230 (330)
T ss_dssp             HHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHH
T ss_pred             HHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHH
Confidence            99999988889999999999999996321       1234556555544433 4567776      67889999999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |++++.
T Consensus       231 a~a~~~  236 (330)
T 2c20_A          231 VAAHFL  236 (330)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=2.1e-32  Score=260.43  Aligned_cols=225  Identities=27%  Similarity=0.330  Sum_probs=173.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc----------------cccc--ccCCCceEEeeCcccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE----------------NVMH--HFGNPNFELIRHDVVE  175 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~----------------~~~~--~~~~~~~~~~~~D~~~  175 (340)
                      .++++|||||||||||++|+++|+++|++|++++|.......                .+..  .....+++++.+|+.+
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            467899999999999999999999999999999985321100                0000  0112467888999876


Q ss_pred             cc-----cCC--CCEEEEcccCCCCCCCcCCh---hhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCC
Q 019470          176 PL-----LLE--VDQIYHLACPASPVHYKFNP---VKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQK  243 (340)
Q Consensus       176 ~~-----~~~--~D~Vih~Ag~~~~~~~~~~~---~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~  243 (340)
                      +.     +.+  +|+|||+||.........++   ...+++|+.|+.+++++|++.++  +||++||.++||... .+.+
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~  167 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIE  167 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBC
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCC
Confidence            42     344  99999999965322222233   34789999999999999999873  899999999998765 4667


Q ss_pred             CCCCCCC---------CCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC------------C---c
Q 019470          244 ETYWGNV---------NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID------------D---G  299 (340)
Q Consensus       244 E~~~~~~---------~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~------------~---~  299 (340)
                      |++|...         .+..+.+.|+.+|+++|.+++.++.+++++++++||++||||+....            +   .
T Consensus       168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  247 (404)
T 1i24_A          168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG  247 (404)
T ss_dssp             SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred             ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchh
Confidence            7644211         24566789999999999999999888899999999999999975311            0   3


Q ss_pred             cHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          300 RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .++..++..+.+++++.+++++++.++|+|++|+|++++.
T Consensus       248 ~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~  287 (404)
T 1i24_A          248 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEI  287 (404)
T ss_dssp             CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHH
Confidence            5778899999999998889999999999999999999875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-32  Score=254.05  Aligned_cols=224  Identities=30%  Similarity=0.444  Sum_probs=171.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-cccccccCCCceEEeeCccccc-----ccCC--CCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEP-----LLLE--VDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~-----~~~~--~D~Vih~  187 (340)
                      ||+|||||||||||++|+++|+++|++|++++|...... ..........+++++.+|+.++     .+.+  +|+|||+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL   80 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence            468999999999999999999999999999998532211 1111111123578888998764     3445  9999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCCC--C---------CCCCCCC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETY--W---------GNVNPIG  254 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~~--~---------~~~~~~~  254 (340)
                      ||.........++...+++|+.++.+++++|++.++  +|||+||.++|+.....+..|++  |         ....+..
T Consensus        81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            996432222346788999999999999999999885  79999999999876544432221  1         1114555


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCC-----CeEEecCCceeEccc
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKE-----PLTVYGDGKQTRSFQ  328 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~v  328 (340)
                      +.+.|+.+|+.+|.+++.++.+++++++++||++|||++.... ...++..++..+++++     ++..++++++.++|+
T Consensus       161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  240 (347)
T 1orr_A          161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVL  240 (347)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeE
Confidence            6789999999999999999888899999999999999975322 2346677777777765     788889999999999


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      |++|+|++++.
T Consensus       241 ~v~Dva~a~~~  251 (347)
T 1orr_A          241 HAEDMISLYFT  251 (347)
T ss_dssp             EHHHHHHHHHH
T ss_pred             EHHHHHHHHHH
Confidence            99999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1e-31  Score=251.94  Aligned_cols=218  Identities=22%  Similarity=0.302  Sum_probs=171.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC-----CCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-----EVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-----~~D~Vih~  187 (340)
                      +++|+|||||||||||++|+++|+++| ++|++++|.............. ...|+.+.+..+..+.     ++|+|||+
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            456899999999999999999999999 8999999975432111111111 2234443333333444     59999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      ||....  ...++...+++|+.++.+++++|++.+++|||+||.++|+.....+++|+     .+..+.+.|+.+|+.+|
T Consensus       123 A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E  195 (357)
T 2x6t_A          123 GACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVFGYSKFLFD  195 (357)
T ss_dssp             CSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSG-----GGCCCSSHHHHHHHHHH
T ss_pred             CcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCc-----CCCCCCChhHHHHHHHH
Confidence            997543  45578889999999999999999998889999999999998766677777     45566789999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCce-eEccccHHHHHHHHHh
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQ-TRSFQFVSDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v~v~Dva~a~~~  339 (340)
                      .+++.++.+.+++++++||++|||++....  ...++..++..+.+++++.+++++++ .++|+|++|+|++++.
T Consensus       196 ~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~  270 (357)
T 2x6t_A          196 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLW  270 (357)
T ss_dssp             HHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHH
Confidence            999999888899999999999999975321  13577788888888888888888888 9999999999999875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.3e-31  Score=251.19  Aligned_cols=216  Identities=29%  Similarity=0.486  Sum_probs=174.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCC-cccccccccCCCceEEeeCccccc-----ccC--CCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~  187 (340)
                      |+||||||+||||++|+++|+++ |++|++++|.... ..+.+.......+++++.+|+.+.     .+.  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999998 7999999986521 222222211235788999999774     234  89999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc--CC--------eEEEEeCcccccCCCC--C--------CCCCCCC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--GA--------RFLLTSTSEVYGDPLQ--H--------PQKETYW  247 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--~~--------~~i~~SS~~v~g~~~~--~--------~~~E~~~  247 (340)
                      ||.........++...+++|+.++.+++++|++.  ++        +|||+||.++||....  .        +++|+  
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~--  158 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET--  158 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT--
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC--
Confidence            9965322233567889999999999999999987  63        8999999999986542  1        55565  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .+..+.+.|+.+|+.+|.+++.++.+++++++++||++|||++.  ....++..++..+.+++++.+++++++.++|
T Consensus       159 ---~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (361)
T 1kew_A          159 ---TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH--FPEKLIPLVILNALEGKPLPIYGKGDQIRDW  233 (361)
T ss_dssp             ---SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC--CTTSHHHHHHHHHHHTCCEEEETTSCCEEEE
T ss_pred             ---CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCC--CcccHHHHHHHHHHcCCCceEcCCCceeEee
Confidence               45567789999999999999999888899999999999999975  2345677788888889888888999999999


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      +|++|+|++++.
T Consensus       234 i~v~Dva~a~~~  245 (361)
T 1kew_A          234 LYVEDHARALHM  245 (361)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             EEHHHHHHHHHH
Confidence            999999999875

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=9e-32  Score=246.85  Aligned_cols=214  Identities=22%  Similarity=0.306  Sum_probs=161.1

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC-----CCCEEEEcccCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-----EVDQIYHLACPA  191 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-----~~D~Vih~Ag~~  191 (340)
                      +|||||||||||++|+++|+++| ++|++++|.............. ...|+.+.+..+..+.     ++|+|||+||..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~   79 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence            58999999999999999999999 8999999975432111111111 2344444444444454     499999999975


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                      ..  ...++...+++|+.++.+++++|++.+++|||+||.++||.....+.+|+     .+..|.+.|+.+|+.+|.+++
T Consensus        80 ~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~~~e~~~~  152 (310)
T 1eq2_A           80 ST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLFDEYVR  152 (310)
T ss_dssp             CT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHHHHHHH
T ss_pred             cC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHHHHHHH
Confidence            43  45678889999999999999999998889999999999998766677777     455667899999999999999


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCce-eEccccHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQ-TRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v~v~Dva~a~~~  339 (340)
                      .++++++++++++||+++||++....  ...++..++..+.+++++.+++++++ .++|+|++|+|++++.
T Consensus       153 ~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~  223 (310)
T 1eq2_A          153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLW  223 (310)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHH
T ss_pred             HHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHH
Confidence            99888899999999999999975321  13577888888888888888888888 9999999999999875

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.98  E-value=1.2e-31  Score=251.47  Aligned_cols=219  Identities=21%  Similarity=0.238  Sum_probs=172.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----cC--CCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~--~~D~Vih  186 (340)
                      +++|+||||||+||||++|+++|+++|++|++++|................++.++.+|+.++.     +.  ++|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            4567999999999999999999999999999999975443221111111346788899987742     33  3899999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCC-CCCCCCCCCCCCCCCCCChHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQ-HPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      +||.........++...+++|+.++.+++++|++.+ + +|||+||.++||.... .+..|+     .+..+.+.|+.+|
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~-----~~~~~~~~Y~~sK  161 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNSK  161 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCC-----CCCCCCCccHHHH
Confidence            998532222345677899999999999999999886 5 8999999999987543 355665     4556678999999


Q ss_pred             HHHHHHHHHHHHhh---------CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHH
Q 019470          264 RTAETLTMDYHRGA---------GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV  334 (340)
Q Consensus       264 ~~~E~~v~~~~~~~---------gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva  334 (340)
                      +.+|.+++.++.++         +++++++||+++||++.. ....++..++..+.+++++.+ +++++.++|+|++|++
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~-~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva  239 (357)
T 1rkx_A          162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW-ALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPL  239 (357)
T ss_dssp             HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC-CSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCC-ccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHH
Confidence            99999999988754         999999999999999742 124678888888888887765 4567899999999999


Q ss_pred             HHHHh
Q 019470          335 RLTET  339 (340)
Q Consensus       335 ~a~~~  339 (340)
                      ++++.
T Consensus       240 ~a~~~  244 (357)
T 1rkx_A          240 SGYLL  244 (357)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.98  E-value=3.3e-31  Score=247.28  Aligned_cols=219  Identities=26%  Similarity=0.448  Sum_probs=170.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC------cccccccc--cCCCceEEeeCccccc-----ccC--C
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG------RKENVMHH--FGNPNFELIRHDVVEP-----LLL--E  180 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~------~~~~~~~~--~~~~~~~~~~~D~~~~-----~~~--~  180 (340)
                      +|+||||||+||||++|+++|+++|++|++++|....      ..+.....  ....+++++.+|+.+.     .+.  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4689999999999999999999999999999986443      11111100  0124678888998764     233  7


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CCh
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSC  258 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~  258 (340)
                      +|+|||+||.........++...+++|+.++.+++++|++.++ +|||+||.++||.....+++|+     .+..+ .+.
T Consensus        82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~-----~~~~p~~~~  156 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA-----HPTGGCTNP  156 (348)
T ss_dssp             EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSSH
T ss_pred             CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCC-----CCCCCCCCc
Confidence            9999999996432223456788999999999999999999886 8999999999998777778887     34445 689


Q ss_pred             HHHHHHHHHHHHHHHHHh-hCCcEEEEEeCceeCCCCC------CC--CccHHHHHHHHHH-hCCCeEEec------CCc
Q 019470          259 YDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPRMC------ID--DGRVVSNFVAQAL-RKEPLTVYG------DGK  322 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~-~gi~~~ivRp~~i~G~~~~------~~--~~~~~~~~~~~~~-~~~~~~~~~------~g~  322 (340)
                      |+.+|+.+|.+++.++++ .+++++++||+++||++..      ..  ...++..++..+. ++.++.+++      +++
T Consensus       157 Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  236 (348)
T 1ek6_A          157 YGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT  236 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCc
Confidence            999999999999999876 2399999999999998521      11  2346666666666 567777776      678


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      +.++|+|++|+|++++.
T Consensus       237 ~~~~~i~v~Dva~a~~~  253 (348)
T 1ek6_A          237 GVRDYIHVVDLAKGHIA  253 (348)
T ss_dssp             CEECEEEHHHHHHHHHH
T ss_pred             eEEeeEEHHHHHHHHHH
Confidence            89999999999999864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.98  E-value=8.4e-32  Score=248.55  Aligned_cols=210  Identities=22%  Similarity=0.345  Sum_probs=166.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPAS  192 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~  192 (340)
                      ++|+||||||+||||++|+++|+++|++|++++|..              .+|+.+.+.....+.  ++|+|||+||...
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   67 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVG   67 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence            356999999999999999999999999999988742              122223333334455  8999999998643


Q ss_pred             CC-CCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHH
Q 019470          193 PV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR-SCYDEGKRTAETL  269 (340)
Q Consensus       193 ~~-~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~~  269 (340)
                      .. ....++...+++|+.++.+++++|++.++ +|||+||.++||.....+++|+++.. .+..|. +.|+.+|+.+|.+
T Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~~E~~  146 (321)
T 1e6u_A           68 GIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQ-GTLEPTNEPYAIAKIAGIKL  146 (321)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTS-SCCCGGGHHHHHHHHHHHHH
T ss_pred             CcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCcccccc-CCCCCCCCccHHHHHHHHHH
Confidence            21 13346788999999999999999999987 99999999999987777788875432 133443 5899999999999


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHh----C-CCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALR----K-EPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~----~-~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.++++.+++++++||+.+||++....  ...++..++..+.+    + .++.+++++++.++|+|++|+|++++.
T Consensus       147 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~  223 (321)
T 1e6u_A          147 CESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  223 (321)
T ss_dssp             HHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHH
Confidence            9999888899999999999999975321  23567777777765    3 577778999999999999999999875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=4.8e-31  Score=250.64  Aligned_cols=219  Identities=25%  Similarity=0.405  Sum_probs=169.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHH-hCCCeEEEEeCCCCCc--------ccccc---ccc-C---CCc---eEEeeCccccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLI-ARGDSVIVVDNFFTGR--------KENVM---HHF-G---NPN---FELIRHDVVEP  176 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll-~~G~~V~~l~r~~~~~--------~~~~~---~~~-~---~~~---~~~~~~D~~~~  176 (340)
                      +|+||||||+||||++|+++|+ ++|++|++++|.....        .+.+.   ..+ .   ..+   +.++.+|+.++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4699999999999999999999 9999999999875432        11111   001 0   123   78889998764


Q ss_pred             -----ccC--C-CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCC-------CC
Q 019470          177 -----LLL--E-VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-------QH  240 (340)
Q Consensus       177 -----~~~--~-~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~-------~~  240 (340)
                           .+.  + +|+|||+||.........++...+++|+.++.+++++|++.++ +|||+||.++|+...       ..
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence                 233  5 9999999996532223356788999999999999999999987 899999999998765       46


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCC-------CCccHHHHHH----HHH
Q 019470          241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI-------DDGRVVSNFV----AQA  309 (340)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~-------~~~~~~~~~~----~~~  309 (340)
                      +++|+     .+..+.+.|+.+|+++|.+++.++.+++++++++||++|||++...       ....++..++    ..+
T Consensus       162 ~~~E~-----~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  236 (397)
T 1gy8_A          162 PIDIN-----AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (397)
T ss_dssp             CBCTT-----SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             CcCcc-----CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence            67777     4556678999999999999999988889999999999999996421       1244555554    244


Q ss_pred             HhCC------------CeEEec------CCceeEccccHHHHHHHHHh
Q 019470          310 LRKE------------PLTVYG------DGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       310 ~~~~------------~~~~~~------~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .++.            ++.+++      ++++.++|+|++|+|++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~  284 (397)
T 1gy8_A          237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHIL  284 (397)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHH
T ss_pred             HhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHH
Confidence            4443            467776      77899999999999999875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.97  E-value=3e-30  Score=242.95  Aligned_cols=220  Identities=27%  Similarity=0.335  Sum_probs=170.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-ccccccc-----CCCceEEeeCcccccc-----cC--CCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHF-----GNPNFELIRHDVVEPL-----LL--EVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~~~-----~~--~~D  182 (340)
                      ||+||||||+||||++|+++|+++|++|++++|...... +.+....     ...+++++.+|+.+..     +.  ++|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999754311 1111110     1246788889987642     33  479


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC----eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~----~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      +|||+||........+++...+++|+.++.+++++|++.++    +||++||.++|+.....+.+|+     .+..+.+.
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~-----~~~~~~~~  155 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP  155 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCSH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCcc-----CCCCCCCh
Confidence            99999997654445567888899999999999999999874    8999999999998766677777     45566789


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCC-CeEEecCCceeEccccHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      |+.+|+.+|.+++.++.++++.++++|++++|||+..... ...+..++..+.+++ +...++++++.++|+|++|+|++
T Consensus       156 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  235 (372)
T 1db3_A          156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHH
Confidence            9999999999999999888999999999999999753211 123455666666775 35567888999999999999999


Q ss_pred             HHhC
Q 019470          337 TETI  340 (340)
Q Consensus       337 ~~~~  340 (340)
                      ++.+
T Consensus       236 ~~~~  239 (372)
T 1db3_A          236 QWMM  239 (372)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            8753

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.97  E-value=5.3e-31  Score=245.14  Aligned_cols=205  Identities=13%  Similarity=0.056  Sum_probs=157.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag  189 (340)
                      .+|+|||||||||||++|+++|+++|++|++++|+...... +    ...+++++.+|+.+.     .+.++|+|||+||
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-L----AYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-G----GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-h----ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            34699999999999999999999999999999997543221 1    113578888888764     4668999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCC--CCCCCCCCCCCCCCCC----CChHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ--HPQKETYWGNVNPIGV----RSCYDEG  262 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~--~~~~E~~~~~~~~~~~----~~~Y~~s  262 (340)
                      ...  .+..++...+++|+.++.+++++|++.++ +|||+||.++|+....  .+ +|+     .+..|    .+.|+.+
T Consensus        87 ~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~-----~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           87 YYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEG-----LFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTT-----CCCSSCCTTSCHHHHH
T ss_pred             cCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCC-----CCCCccccccChHHHH
Confidence            643  23456788999999999999999999986 9999999999987544  33 666     44555    6899999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |+.+|.+++.++++ +++++++||+.+||++..  ... +..++..+.++....+   +++.++|+|++|+|++++.
T Consensus       159 K~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~--~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~  228 (342)
T 2x4g_A          159 KWALDEQAREQARN-GLPVVIGIPGMVLGELDI--GPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLM  228 (342)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEEECEEECSCCS--SCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhc-CCcEEEEeCCceECCCCc--ccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHH
Confidence            99999999998877 999999999999999741  112 4566777777776655   4678999999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=1.2e-31  Score=246.32  Aligned_cols=211  Identities=18%  Similarity=0.239  Sum_probs=166.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih  186 (340)
                      +|+|||||||||||++|+++|+++  |++|++++|.....  ...     .+++++.+|+.+.     .+.  ++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih   74 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT--DVV-----NSGPFEVVNALDFNQIEHLVEVHKITDIYL   74 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC--HHH-----HSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc--ccc-----CCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence            468999999999999999999999  89999999975432  111     2356778888664     344  7999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCC-CCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-HPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      +||.... ....++...+++|+.++.+++++|++.++ +|||+||.++|+.... .+.+|+     .+..+.+.|+.+|+
T Consensus        75 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~~~~~Y~~sK~  148 (312)
T 2yy7_A           75 MAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQY-----TIMEPSTVYGISKQ  148 (312)
T ss_dssp             CCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSS-----CBCCCCSHHHHHHH
T ss_pred             CCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCcccc-----CcCCCCchhHHHHH
Confidence            9986432 12356788999999999999999999987 9999999999987543 345555     45566789999999


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCc--cHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++.++++++++++++||+++||++..+...  .+...++...++++++..++++++.++|+|++|+|++++.
T Consensus       149 ~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  225 (312)
T 2yy7_A          149 AGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATIN  225 (312)
T ss_dssp             HHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHH
Confidence            99999999988889999999999999976432221  2333344445566667778888899999999999999875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.97  E-value=1.5e-31  Score=243.20  Aligned_cols=192  Identities=20%  Similarity=0.254  Sum_probs=160.5

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPVH  195 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~~  195 (340)
                      +|||||||||||++|+++|+++|++|++++|..               +|+.+.+..+..+.  ++|+|||+||......
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~   71 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQ   71 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhcCCCEEEECCcccChHH
Confidence            899999999999999999999999999999821               22223333334444  6999999999765444


Q ss_pred             CcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Q 019470          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR  275 (340)
Q Consensus       196 ~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~  275 (340)
                      ...++...+++|+.++.+++++|++.+++|||+||.++|+.....+++|+     ++..|.+.|+.+|+.+|.+++.+. 
T Consensus        72 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~~~~-  145 (287)
T 3sc6_A           72 AEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEF-----HNPAPINIYGASKYAGEQFVKELH-  145 (287)
T ss_dssp             HTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTT-----SCCCCCSHHHHHHHHHHHHHHHHC-
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCC-----CCCCCCCHHHHHHHHHHHHHHHhC-
Confidence            45678899999999999999999999999999999999998877888888     566778999999999999997763 


Q ss_pred             hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          276 GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       276 ~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                         .+++++||+.+||++.    ..++..++..+.+++++.++++  +.++|+|++|+|++++.
T Consensus       146 ---~~~~ilR~~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~  200 (287)
T 3sc6_A          146 ---NKYFIVRTSWLYGKYG----NNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINK  200 (287)
T ss_dssp             ---SSEEEEEECSEECSSS----CCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHH
T ss_pred             ---CCcEEEeeeeecCCCC----CcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHH
Confidence               4789999999999863    4577788888888888887765  78999999999999875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=2.2e-30  Score=244.52  Aligned_cols=218  Identities=25%  Similarity=0.258  Sum_probs=170.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-------CCCceEEeeCcccccc-----cC--CCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-------GNPNFELIRHDVVEPL-----LL--EVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~-----~~--~~D  182 (340)
                      |+||||||+||||++|+++|+++|++|++++|............+       ...+++++.+|+.++.     +.  ++|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999997543211111111       2246788899987642     33  479


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC----eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~----~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      +|||+||.........++...+++|+.++.+++++|++.++    +|||+||.++|+.....+++|+     .+..+.+.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~~~~~~  179 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSP  179 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCCSH
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc-----CCCCCCCh
Confidence            99999996432222456788999999999999999999874    8999999999998776677887     45566789


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCC-CeEEecCCceeEccccHHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      |+.+|+.+|.+++.++.+++++++++||+++|||+..... ...+..++..+.+++ ....++++++.++|+|++|+|++
T Consensus       180 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a  259 (375)
T 1t2a_A          180 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA  259 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHH
Confidence            9999999999999998888999999999999999742211 123445566666775 44567888999999999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       260 ~~~  262 (375)
T 1t2a_A          260 MWL  262 (375)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.97  E-value=5.2e-31  Score=244.93  Aligned_cols=222  Identities=20%  Similarity=0.199  Sum_probs=170.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEe-eCccccc-----ccCCCCE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELI-RHDVVEP-----LLLEVDQ  183 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~-~~D~~~~-----~~~~~D~  183 (340)
                      .+++|+||||||+||||++|+++|+++|++|++++|+..... .+...+   ...+++++ .+|+.+.     .+.++|+
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            356789999999999999999999999999999999643221 111110   11456777 6787653     4557999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHH-cCC-eEEEEeCcccccCCCC----CCCCCCCCCC--------
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR-VGA-RFLLTSTSEVYGDPLQ----HPQKETYWGN--------  249 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~-~~~-~~i~~SS~~v~g~~~~----~~~~E~~~~~--------  249 (340)
                      |||+||....   ..++...+++|+.++.+++++|++ .++ +|||+||.++|+....    .+++|++|.+        
T Consensus        87 vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            9999997542   246788999999999999999985 554 9999999999864322    4677776532        


Q ss_pred             ---CCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCc-cHHHHHHHHHHhCCCeEEecCCce
Q 019470          250 ---VNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDG-RVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       250 ---~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                         ..+..+.+.|+.+|+.+|.+++.+++++  +++++++||+++||+....... ..+..++..++++++..+++++ +
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-P  242 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-C
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-C
Confidence               1133455789999999999999998765  7899999999999997643322 3778888888888887766765 7


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      .++|+|++|+|++++.
T Consensus       243 ~~~~v~v~Dva~a~~~  258 (342)
T 1y1p_A          243 PQYYVSAVDIGLLHLG  258 (342)
T ss_dssp             SEEEEEHHHHHHHHHH
T ss_pred             cCCEeEHHHHHHHHHH
Confidence            7899999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.97  E-value=2.2e-30  Score=241.01  Aligned_cols=220  Identities=23%  Similarity=0.269  Sum_probs=171.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc-ccccccCCCceEEeeCccccc-----ccC--CCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-NVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih  186 (340)
                      ++|+||||||+||||++|+++|+++|++|++++|....... .+.......+++++.+|+.+.     .+.  ++|+|||
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            46799999999999999999999999999999997654321 111111224678888998764     233  4699999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC--CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      +||.........++...+++|+.++.+++++|++.+  .+||++||.++||.....+.+|+     .+..+.+.|+.+|+
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~~~~~Y~~sK~  156 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEK-----TPFYPRSPYAVAKL  156 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCcc-----CCCCCCChhHHHHH
Confidence            999753222345788899999999999999999887  48999999999998777777776     45566789999999


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++.++.+++++++++|++++|||+...+. ...+..++..+.+++. ...++++++.++|+|++|+|++++.
T Consensus       157 ~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~  233 (345)
T 2z1m_A          157 FGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWL  233 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHH
Confidence            9999999999888999999999999999753211 1223344555566653 3457888899999999999999875

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.97  E-value=3.2e-30  Score=239.74  Aligned_cols=218  Identities=26%  Similarity=0.494  Sum_probs=164.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccccc-----cC--CCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~-----~~--~~D~Vih~  187 (340)
                      |+||||||+||||++|+++|+++|++|++++|......+....  .....++.++.+|+.++.     +.  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            4899999999999999999999999999998754322211110  011235678888887642     22  59999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CChHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRT  265 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~~  265 (340)
                      ||.........++...+++|+.++.+++++|++.++ +||++||.++||.....+.+|+.     +..+ .+.|+.+|++
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~-----~~~~~~~~Y~~sK~~  155 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTS-----CCCCCSSHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCccc-----CCCCCCChHHHHHHH
Confidence            986432223345678899999999999999999886 89999999999877666777763     3333 5899999999


Q ss_pred             HHHHHHHHHHhh-CCcEEEEEeCceeCCCCC------CC--CccHHHHHHHHHH-hCCCeEEec------CCceeEcccc
Q 019470          266 AETLTMDYHRGA-GVEVRIARIFNTYGPRMC------ID--DGRVVSNFVAQAL-RKEPLTVYG------DGKQTRSFQF  329 (340)
Q Consensus       266 ~E~~v~~~~~~~-gi~~~ivRp~~i~G~~~~------~~--~~~~~~~~~~~~~-~~~~~~~~~------~g~~~~~~v~  329 (340)
                      +|.+++.++.+. +++++++||+++||+...      ..  ...++..+..... ++..+.+++      ++++.++|+|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~  235 (338)
T 1udb_A          156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEE
T ss_pred             HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEE
Confidence            999999998776 899999999999998421      11  2345555555444 345566655      5678999999


Q ss_pred             HHHHHHHHHh
Q 019470          330 VSDLVRLTET  339 (340)
Q Consensus       330 v~Dva~a~~~  339 (340)
                      ++|+|++++.
T Consensus       236 v~Dva~a~~~  245 (338)
T 1udb_A          236 VMDLADGHVV  245 (338)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.97  E-value=1.6e-29  Score=234.67  Aligned_cols=205  Identities=25%  Similarity=0.414  Sum_probs=162.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vi  185 (340)
                      .+++|+||||||+||||++|+++|+++|++|++++|......+.. ..+  .+++++.+|+.+.     .+.  ++|+||
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi   93 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-PPV--AGLSVIEGSVTDAGLLERAFDSFKPTHVV   93 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-CSC--TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-hcc--CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence            567889999999999999999999999999999999654332111 111  4678889998764     345  899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCC--CCCCCCCCCCCCCCCCChHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQH--PQKETYWGNVNPIGVRSCYDEG  262 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~--~~~E~~~~~~~~~~~~~~Y~~s  262 (340)
                      |+||..... ...++.  +++|+.++.+++++|++.++ +||++||.++|+.....  +++|++       .+.+.|+.+
T Consensus        94 h~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~-------~~~~~Y~~s  163 (330)
T 2pzm_A           94 HSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT-------APFTSYGIS  163 (330)
T ss_dssp             ECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC-------CCCSHHHHH
T ss_pred             ECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC-------CCCChHHHH
Confidence            999975432 223343  89999999999999999887 99999999999875443  666663       455899999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHH-HHHhC
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR-LTETI  340 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~-a~~~~  340 (340)
                      |+.+|.+++.+    +++++++||+++|||+.   ...++..++..+.++.  ..++++. .++|+|++|+|+ +++.+
T Consensus       164 K~~~e~~~~~~----~~~~~~iR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~  232 (330)
T 2pzm_A          164 KTAGEAFLMMS----DVPVVSLRLANVTGPRL---AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSL  232 (330)
T ss_dssp             HHHHHHHHHTC----SSCEEEEEECEEECTTC---CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHc----CCCEEEEeeeeeECcCC---CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHH
Confidence            99999998765    79999999999999983   3456677777777765  4456667 899999999999 88753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.97  E-value=1.6e-30  Score=237.68  Aligned_cols=196  Identities=19%  Similarity=0.135  Sum_probs=157.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCC--CCEEEEcccCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE--VDQIYHLACPASPV  194 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~D~Vih~Ag~~~~~  194 (340)
                      |+|||||||||||++|+++|+ +|++|++++|...           ...+|+.+.+..+..+.+  +|+|||+||.....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~   68 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD   68 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence            489999999999999999999 8999999998641           011222222222334444  99999999865432


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  274 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~  274 (340)
                      ....++...+++|+.++.+++++|++.+++|||+||.++|+.....+.+|+     .+..|.+.|+.+|+.+|.+++.+.
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~~~~  143 (299)
T 1n2s_A           69 KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEKALQDNC  143 (299)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHHHHHHHC
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCC-----CCCCCccHHHHHHHHHHHHHHHhC
Confidence            245678889999999999999999998889999999999998776777887     556677899999999999997763


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                          .+++++||+++||++.    ..++..++..+.+++++..+++  +.++|+|++|++++++.
T Consensus       144 ----~~~~ilRp~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~  198 (299)
T 1n2s_A          144 ----PKHLIFRTSWVYAGKG----NNFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAH  198 (299)
T ss_dssp             ----SSEEEEEECSEECSSS----CCHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHH
T ss_pred             ----CCeEEEeeeeecCCCc----CcHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHH
Confidence                4899999999999964    2577778888888887777664  78999999999999875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.97  E-value=1.1e-29  Score=256.73  Aligned_cols=222  Identities=24%  Similarity=0.398  Sum_probs=180.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih  186 (340)
                      .++|+|||||||||||++|+++|+++ |++|++++|+......    .....+++++.+|+.+.      .+.++|+|||
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            36789999999999999999999998 8999999997543221    12235788899998763      2347999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCC-CCC-CCCCChHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGN-VNP-IGVRSCYDEGKR  264 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~-~~~-~~~~~~Y~~sK~  264 (340)
                      +||......+..++...+++|+.++.+++++|++.+.+|||+||.++||.....+++|+++.. ..+ ..+.+.|+.+|+
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHH
Confidence            999755433445778899999999999999999988899999999999987777778875421 111 145568999999


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCC------CCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCI------DDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      .+|.+++.++++.+++++++||+++||++...      ....++..++..+.++.++.+++++++.++|+|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~  548 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  548 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHH
Confidence            99999999988889999999999999997531      124577888888999999988888899999999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       549 ~  549 (660)
T 1z7e_A          549 R  549 (660)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.97  E-value=1.3e-29  Score=239.57  Aligned_cols=217  Identities=22%  Similarity=0.261  Sum_probs=168.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc-ccccccC-----CC-ceEEeeCccccc-----ccC--CCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE-NVMHHFG-----NP-NFELIRHDVVEP-----LLL--EVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~-~~~~~~~-----~~-~~~~~~~D~~~~-----~~~--~~D  182 (340)
                      |+||||||+||||++|++.|+++|++|++++|....... .+.....     .. +++++.+|+.+.     .+.  ++|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999997543211 1111100     12 678889998764     233  479


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC------eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA------RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~------~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      +|||+||.........++...+++|+.++.+++++|++.++      +|||+||.++||.... +.+|+     .+..+.
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~-----~~~~~~  182 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSET-----TPFHPR  182 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTT-----SCCCCC
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCC-----CCCCCC
Confidence            99999996543223456788999999999999999988652      8999999999998765 77777     455667


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCCC-eEEecCCceeEccccHHHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKEP-LTVYGDGKQTRSFQFVSDLV  334 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~v~v~Dva  334 (340)
                      +.|+.+|+.+|.+++.++.++++.++++|++++|||+...+. ...+..++..+.++.. ...++++++.++|+|++|+|
T Consensus       183 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva  262 (381)
T 1n7h_A          183 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  262 (381)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHH
Confidence            899999999999999998888999999999999999753211 1234455666666754 44578889999999999999


Q ss_pred             HHHHh
Q 019470          335 RLTET  339 (340)
Q Consensus       335 ~a~~~  339 (340)
                      ++++.
T Consensus       263 ~a~~~  267 (381)
T 1n7h_A          263 EAMWL  267 (381)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.97  E-value=1.5e-29  Score=232.96  Aligned_cols=206  Identities=23%  Similarity=0.291  Sum_probs=162.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEEcc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLA  188 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~A  188 (340)
                      +||||||+||||++|+++|+++  |++|++++|......          +++++.+|+.++     .+.  ++|+|||+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            5899999999999999999999  899999998643221          346777887664     334  799999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCC-CCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-QHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~-~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      |.... ....++...+++|+.++.+++++|++.++ +||++||.++|+... ..+..|+     .+..+.+.|+.+|+.+
T Consensus        71 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~p~~~Y~~sK~~~  144 (317)
T 3ajr_A           71 GILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSI-----TITRPRTMFGVTKIAA  144 (317)
T ss_dssp             CCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSS-----SCCCCCSHHHHHHHHH
T ss_pred             cccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCcccc-----ccCCCCchHHHHHHHH
Confidence            86431 12346778999999999999999999987 999999999998643 2344454     4566778999999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |.+++.+.++++++++++||+.+||+...+..  ..+...++...++++.+..++++++.++|+|++|++++++.
T Consensus       145 e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          145 ELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHH
Confidence            99999998888999999999999997643221  13333344555666777777888889999999999999864

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.97  E-value=2.7e-29  Score=233.88  Aligned_cols=216  Identities=22%  Similarity=0.245  Sum_probs=173.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCC-------CeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----cc-C
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG-------DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL-L  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~-~  179 (340)
                      .+++|+||||||+||||++|+++|+++|       ++|++++|.......     ....+++++.+|+.++     .+ .
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~   85 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVEA   85 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHHT
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHhc
Confidence            3567899999999999999999999999       899999997543221     1234678888998764     23 4


Q ss_pred             CCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-----C-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-----A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-----~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      ++|+|||+||.... ....++...+++|+.|+.+++++|++.+     + +||++||.++|+.....+.+|+     .+.
T Consensus        86 ~~d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~  159 (342)
T 2hrz_A           86 RPDVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE-----FHT  159 (342)
T ss_dssp             CCSEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT-----CCC
T ss_pred             CCCEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC-----CCC
Confidence            79999999986431 1234678899999999999999998875     4 8999999999987655677777     455


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeC-CCCCCC-CccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG-PRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      .+.+.|+.+|+++|.+++.++++++++++++|++.+|| |+.... ...++..++..++++++..++++++...+++|++
T Consensus       160 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  239 (342)
T 2hrz_A          160 TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR  239 (342)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehH
Confidence            67789999999999999999888889999999999998 653211 1346777888888888877766767778899999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |++++++.
T Consensus       240 Dva~~~~~  247 (342)
T 2hrz_A          240 SAVGFLIH  247 (342)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.97  E-value=2.2e-29  Score=234.00  Aligned_cols=202  Identities=27%  Similarity=0.393  Sum_probs=158.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCC--CCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLE--VDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~--~D~Vi  185 (340)
                      ..+||+||||||+||||++|+++|+++|++|++++|......+.+..   ..+++++.+|+.+.     .+.+  +|+||
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi   94 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDAVV   94 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence            46788999999999999999999999999999999975433222221   14678889998774     3445  99999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCccccc----CCCCCCCCCCCCCCCCCCCCC-ChH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYG----DPLQHPQKETYWGNVNPIGVR-SCY  259 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g----~~~~~~~~E~~~~~~~~~~~~-~~Y  259 (340)
                      |+||..... ...++.  +++|+.++.+++++|++.++ +|||+||.++|+    .... +++|++       .+. +.|
T Consensus        95 h~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-------~p~~~~Y  163 (333)
T 2q1w_A           95 HTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR-------NPANSSY  163 (333)
T ss_dssp             ECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-------CCTTCHH
T ss_pred             ECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC-------CCCCCch
Confidence            999975432 222333  89999999999999999987 999999999998    5444 666663       455 789


Q ss_pred             HHHHHHHHHHHHH-HHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHH
Q 019470          260 DEGKRTAETLTMD-YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTE  338 (340)
Q Consensus       260 ~~sK~~~E~~v~~-~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~  338 (340)
                      +.+|+++|.+++. +.     +++++||+++||++   ....++..++..+.++.  .+++ +++.++|+|++|+|++++
T Consensus       164 ~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~---~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~  232 (333)
T 2q1w_A          164 AISKSANEDYLEYSGL-----DFVTFRLANVVGPR---NVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATV  232 (333)
T ss_dssp             HHHHHHHHHHHHHHTC-----CEEEEEESEEESTT---CCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhC-----CeEEEeeceEECcC---CcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHH
Confidence            9999999999876 53     89999999999997   23457777887777776  3455 678899999999999987


Q ss_pred             h
Q 019470          339 T  339 (340)
Q Consensus       339 ~  339 (340)
                      .
T Consensus       233 ~  233 (333)
T 2q1w_A          233 R  233 (333)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=1.4e-29  Score=230.63  Aligned_cols=194  Identities=20%  Similarity=0.250  Sum_probs=155.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPAS  192 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~  192 (340)
                      ..++|||||||||||++|+++|+++|++|++++|..               +|+.+.+..+..+.  ++|+|||+||...
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   75 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTA   75 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence            345899999999999999999999999999999841               12222222333444  7999999998643


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD  272 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~  272 (340)
                      ......++...+++|+.++.+++++|++.+++|||+||.++|+.....+.+|+     .+..+.+.|+.+|+.+|.+++.
T Consensus        76 ~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~E~~~~~  150 (292)
T 1vl0_A           76 VDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGENFVKA  150 (292)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCC-----CCCCCccHHHHHHHHHHHHHHh
Confidence            22234578889999999999999999998889999999999998766678887     4556678999999999999977


Q ss_pred             HHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          273 YHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       273 ~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +    +.+++++||+.+||++     ..++..++..+.++.++...+  ++.++|+|++|+|++++.
T Consensus       151 ~----~~~~~~lR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~  206 (292)
T 1vl0_A          151 L----NPKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLK  206 (292)
T ss_dssp             H----CSSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHH
T ss_pred             h----CCCeEEEeeeeeeCCC-----cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHH
Confidence            5    3479999999999982     246677777777787777665  478999999999999875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2.1e-29  Score=245.61  Aligned_cols=223  Identities=19%  Similarity=0.181  Sum_probs=168.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC---CCeEEEEeCCCCCcc--cccccccC--------------CCceEEeeCcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR---GDSVIVVDNFFTGRK--ENVMHHFG--------------NPNFELIRHDV  173 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~---G~~V~~l~r~~~~~~--~~~~~~~~--------------~~~~~~~~~D~  173 (340)
                      ..++|+|||||||||||++|+++|+++   |++|++++|......  +.+...+.              ..+++++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            356889999999999999999999999   899999999754321  11111111              25789999999


Q ss_pred             cccc-----------cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCC
Q 019470          174 VEPL-----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       174 ~~~~-----------~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~  241 (340)
                      .++.           +.++|+|||+||....    .++...+++|+.++.+++++|++.++ +|||+||.++|+.....+
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~  225 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSA  225 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTT
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCC
Confidence            7442           3479999999997543    56778889999999999999999986 899999999999877777


Q ss_pred             CCCCCCCC-CCC-----CCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCC---CCCccHHHHHHHHHHhC
Q 019470          242 QKETYWGN-VNP-----IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC---IDDGRVVSNFVAQALRK  312 (340)
Q Consensus       242 ~~E~~~~~-~~~-----~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~---~~~~~~~~~~~~~~~~~  312 (340)
                      ++|++... .++     ....+.|+.+|+.+|.+++.++++.+++++++|||+|||++..   .+...++..++......
T Consensus       226 ~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~  305 (478)
T 4dqv_A          226 FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMAT  305 (478)
T ss_dssp             CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHH
T ss_pred             cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHc
Confidence            77764211 011     1122569999999999999998878999999999999998531   12345666776666553


Q ss_pred             CCeE--Eec---C---CceeEccccHHHHHHHHHh
Q 019470          313 EPLT--VYG---D---GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       313 ~~~~--~~~---~---g~~~~~~v~v~Dva~a~~~  339 (340)
                      +..+  +++   +   ++..++|+|++|+|++++.
T Consensus       306 g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~  340 (478)
T 4dqv_A          306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAV  340 (478)
T ss_dssp             CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHH
T ss_pred             CcccccccccccccccccceeeeeeHHHHHHHHHH
Confidence            3322  111   1   2678899999999999874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.96  E-value=2.2e-29  Score=231.86  Aligned_cols=203  Identities=18%  Similarity=0.201  Sum_probs=137.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASP  193 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~  193 (340)
                      +|+|||||||||||++|+++|+++|++|++++|+...  .      ....+|+.+.+..+..+.  ++|+|||+||....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~------~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   73 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--P------KFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP   73 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--C------CeEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence            4699999999999999999999999999999985432  0      011223333333333444  48999999997554


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY  273 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~  273 (340)
                      .....++...+++|+.++.+++++|++.+++|||+||.++|+. ...+++|+     .+..+.+.|+.+|+.+|.+++.+
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~~~E~-----~~~~~~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPPYREE-----DIPAPLNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             --------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCSBCTT-----SCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCCCCCC-----CCCCCcCHHHHHHHHHHHHHHHh
Confidence            3345678889999999999999999998889999999999987 55667777     45566789999999999999765


Q ss_pred             HHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHH-hCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          274 HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL-RKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       274 ~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                          +++++++||+.|||+.... ...++..++..+. ++..+.+.  +++.++|+|++|+|++++.
T Consensus       148 ----~~~~~~lR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~  207 (315)
T 2ydy_A          148 ----NLGAAVLRIPILYGEVEKL-EESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQ  207 (315)
T ss_dssp             ----CTTCEEEEECSEECSCSSG-GGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHH
T ss_pred             ----CCCeEEEeeeeeeCCCCcc-cccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHH
Confidence                5778999999999997531 1134555666666 66666554  3578899999999999864

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.96  E-value=3.7e-30  Score=234.05  Aligned_cols=188  Identities=18%  Similarity=0.205  Sum_probs=150.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCC-CCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLE-VDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~-~D~Vih~A  188 (340)
                      ++|+||||| +||||++|+++|+++|++|++++|+....         ..+++++.+|+.+.     .+.+ +|+|||+|
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a   71 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYCV   71 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence            467999999 59999999999999999999999975431         24567777887654     3445 99999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      |..     ..++...+++|+.++.+++++|++.++ +|||+||.++||.....+++|+     .+..|.+.|+.+|+.+|
T Consensus        72 ~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E  141 (286)
T 3gpi_A           72 AAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDED-----TPPIAKDFSGKRMLEAE  141 (286)
T ss_dssp             HHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCC-----CCCCCCChhhHHHHHHH
Confidence            863     245667788999999999999999886 8999999999998877777887     56677899999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+ +.+     ++++++||+++||++..        .++..+.+ +.  .++++++.++|+|++|+|++++.
T Consensus       142 ~~-~~~-----~~~~ilR~~~v~G~~~~--------~~~~~~~~-~~--~~~~~~~~~~~i~v~Dva~~~~~  196 (286)
T 3gpi_A          142 AL-LAA-----YSSTILRFSGIYGPGRL--------RMIRQAQT-PE--QWPARNAWTNRIHRDDGAAFIAY  196 (286)
T ss_dssp             HH-GGG-----SSEEEEEECEEEBTTBC--------HHHHHTTC-GG--GSCSSBCEECEEEHHHHHHHHHH
T ss_pred             HH-Hhc-----CCeEEEecccccCCCch--------hHHHHHHh-cc--cCCCcCceeEEEEHHHHHHHHHH
Confidence            98 543     89999999999999741        34444444 22  24778899999999999999875

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=1e-28  Score=222.64  Aligned_cols=162  Identities=22%  Similarity=0.270  Sum_probs=138.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag  189 (340)
                      ++|+||||||+|+||++|+++|+++|++|++++|......        ..+++++.+|+.+.     .+.++|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            4678999999999999999999999999999999754322        35678889998764     4568999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCC-CCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~-~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      ..    ...+++..+++|+.|+.+++++|++.+. +||++||..+|+.. ...+++|+     .+..+.+.|+.+|+.+|
T Consensus        74 ~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           74 IS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD-----VPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             CC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             Cc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHH
Confidence            63    4557889999999999999999999986 99999999999743 34455665     56677799999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCC
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                      .+++.++++++++++++||+.|||+.
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~~v~~~~  170 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIGSCTPEP  170 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEECBCSSSC
T ss_pred             HHHHHHHHHhCCeEEEEEeecccCCC
Confidence            99999998899999999999999974

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=6.7e-29  Score=232.10  Aligned_cols=201  Identities=22%  Similarity=0.299  Sum_probs=163.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-CC-eEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vi  185 (340)
                      .+++|+||||||||+||++|+++|+++ |+ +|++++|.+..... +...+...++.++.+|+.+.     .+.++|+||
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi   96 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSE-MAMEFNDPRMRFFIGDVRDLERLNYALEGVDICI   96 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHH-HHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHH-HHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence            357789999999999999999999999 97 99999996432211 11222335788899998764     456899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      |+||.......+.++...+++|+.|+.+++++|.+.++ +||++||..++                   .|.+.|+.+|+
T Consensus        97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~-------------------~p~~~Y~~sK~  157 (344)
T 2gn4_A           97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA-------------------NPINLYGATKL  157 (344)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS-------------------SCCSHHHHHHH
T ss_pred             ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC-------------------CCccHHHHHHH
Confidence            99997542223456788999999999999999999997 89999997654                   12378999999


Q ss_pred             HHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCC-CeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++.++++   .+++++++|||+|||++     +.+++.+...+.+++ ++.+. +++..++|+|++|+|++++.
T Consensus       158 ~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~-----~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~  230 (344)
T 2gn4_A          158 CSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR-----GSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLK  230 (344)
T ss_dssp             HHHHHHHHGGGCCCSSCCEEEEECCCEETTCT-----TSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEEEeccEECCC-----CCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHH
Confidence            999999988754   58999999999999986     356778888888888 77764 77889999999999999875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.96  E-value=1.2e-29  Score=235.85  Aligned_cols=220  Identities=20%  Similarity=0.246  Sum_probs=149.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc--cccccCCCceEEeeCccccc-----ccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~A  188 (340)
                      +|+||||||+||||++|+++|+++|++|++++|+.......  +.......+++++.+|+.++     .+.++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            57999999999999999999999999999998865432110  00000123577888888764     456899999999


Q ss_pred             cCCCCCCCcCCh-hhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcc-cccCCC---CCCCCCCCCCCCCC---CCCC-C
Q 019470          189 CPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE-VYGDPL---QHPQKETYWGNVNP---IGVR-S  257 (340)
Q Consensus       189 g~~~~~~~~~~~-~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~-v~g~~~---~~~~~E~~~~~~~~---~~~~-~  257 (340)
                      +....  ...++ .+.+++|+.|+.+++++|++.+ + +|||+||.+ +|+...   ..+++|+.|.+.+.   ..+. .
T Consensus        89 ~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  166 (338)
T 2rh8_A           89 TPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW  166 (338)
T ss_dssp             SCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred             CccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence            86421  22233 3488999999999999999986 5 899999976 454321   13678887654322   2221 2


Q ss_pred             hHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCC------ceeEccccHH
Q 019470          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG------KQTRSFQFVS  331 (340)
Q Consensus       258 ~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~~v~v~  331 (340)
                      .|+.+|..+|.+++.+.+++|++++++||++||||+........+..+ ...+.++.. .+++.      ...++|+|++
T Consensus       167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~  244 (338)
T 2rh8_A          167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLA-MSLITGNEF-LINGMKGMQMLSGSVSIAHVE  244 (338)
T ss_dssp             CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHH-HHHHHTCHH-HHHHHHHHHHHHSSEEEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHH-HHHHcCCcc-ccccccccccccCcccEEEHH
Confidence            699999999999999887789999999999999997533222222222 222344332 12211      1234899999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+|++++.
T Consensus       245 Dva~a~~~  252 (338)
T 2rh8_A          245 DVCRAHIF  252 (338)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.96  E-value=2e-28  Score=227.68  Aligned_cols=219  Identities=20%  Similarity=0.265  Sum_probs=150.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc--ccccccC--CCceEEeeCccccc-----ccCCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--NVMHHFG--NPNFELIRHDVVEP-----LLLEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~--~~~~~~~--~~~~~~~~~D~~~~-----~~~~~D~Vi  185 (340)
                      ++++||||||+||||++|+++|+++|++|++++|+......  .+.. +.  ..+++++.+|+.++     .+.++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPKAETHLTLWKADLADEGSFDEAIKGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-cccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence            56799999999999999999999999999999986542111  1101 11  12577888888764     456899999


Q ss_pred             EcccCCCCCCCcCCh-hhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcc-cccCCC-CCCCCCCCCCCCCC----CCCC
Q 019470          186 HLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE-VYGDPL-QHPQKETYWGNVNP----IGVR  256 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~-~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~-v~g~~~-~~~~~E~~~~~~~~----~~~~  256 (340)
                      |+|+...  ....++ ...+++|+.|+.+++++|++.+ + +|||+||.+ +|+... ..+.+|+.|.+.+.    ..+.
T Consensus        83 h~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (337)
T 2c29_D           83 HVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTA  160 (337)
T ss_dssp             ECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCcc
Confidence            9998642  122333 4588999999999999999887 5 899999976 555432 23456665432110    0133


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      +.|+.+|..+|.+++.+.+++|++++++||++||||+........+...+ ..+.+... .++.+. ...|+|++|+|++
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~i~v~Dva~a  237 (337)
T 2c29_D          161 WMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITAL-SPITGNEA-HYSIIR-QGQFVHLDDLCNA  237 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHT-HHHHTCGG-GHHHHT-EEEEEEHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCCc-cccccC-CCCEEEHHHHHHH
Confidence            57999999999999998877899999999999999975322111111111 12334332 222222 3459999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       238 ~~~  240 (337)
T 2c29_D          238 HIY  240 (337)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=8.8e-29  Score=217.23  Aligned_cols=194  Identities=18%  Similarity=0.105  Sum_probs=146.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~  190 (340)
                      +|+|||||||||||++|+++|+++|++|++++|+.......      ..+++++.+|+.++     .+.++|+|||+||.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE------NEHLKVKKADVSSLDEVCEVCKGADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC------CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc------cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence            57999999999999999999999999999999975432211      15788899998764     46789999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ..      +....+++|+.++.+++++|++.++ +|||+||.++|+.....+ .|+     .+..+.+.|+.+|+.+|.+
T Consensus        78 ~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~-----~~~~p~~~Y~~sK~~~e~~  145 (227)
T 3dhn_A           78 GW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR-LMD-----SGEVPENILPGVKALGEFY  145 (227)
T ss_dssp             ------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEE-GGG-----TTCSCGGGHHHHHHHHHHH
T ss_pred             CC------CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCc-ccc-----CCcchHHHHHHHHHHHHHH
Confidence            31      1123677899999999999999997 899999988765433222 222     4456678999999999999


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.+.++.+++++++||+++||++....  .+        ..+....+. .++. ++|+|++|+|++++.
T Consensus       146 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~--~~--------~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~  203 (227)
T 3dhn_A          146 LNFLMKEKEIDWVFFSPAADMRPGVRTG--RY--------RLGKDDMIV-DIVG-NSHISVEDYAAAMID  203 (227)
T ss_dssp             HHTGGGCCSSEEEEEECCSEEESCCCCC--CC--------EEESSBCCC-CTTS-CCEEEHHHHHHHHHH
T ss_pred             HHHHhhccCccEEEEeCCcccCCCcccc--ce--------eecCCCccc-CCCC-CcEEeHHHHHHHHHH
Confidence            9988877899999999999999975321  11        122222222 2222 899999999999875

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.96  E-value=2.4e-28  Score=225.30  Aligned_cols=217  Identities=20%  Similarity=0.248  Sum_probs=146.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeC-CCCCc--ccccccccC--CCceEEeeCccccc-----ccCCCCEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN-FFTGR--KENVMHHFG--NPNFELIRHDVVEP-----LLLEVDQIY  185 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r-~~~~~--~~~~~~~~~--~~~~~~~~~D~~~~-----~~~~~D~Vi  185 (340)
                      +|+|||||||||||++|+++|+++|++|++++| .....  ...+. .+.  ..+++++.+|+.++     .+.++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            468999999999999999999999999999988 43211  11111 111  12467778887664     456899999


Q ss_pred             EcccCCCCCCCcCC-hhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCccc-ccCCC-CCCCCCCCCCCCC---CCCCCC
Q 019470          186 HLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEV-YGDPL-QHPQKETYWGNVN---PIGVRS  257 (340)
Q Consensus       186 h~Ag~~~~~~~~~~-~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~~v-~g~~~-~~~~~E~~~~~~~---~~~~~~  257 (340)
                      |+|+..  .....+ ....+++|+.|+.+++++|++. ++ +|||+||.++ |+... ..+.+|++|.+..   +..+..
T Consensus        80 h~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           80 HTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             ECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccc
Confidence            999753  112223 3458999999999999999988 65 8999999774 44322 2345666543211   112223


Q ss_pred             -hHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHH
Q 019470          258 -CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       258 -~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                       .|+.+|+.+|.+++++.+++|++++++||++|||+.........+..+ ...+.+.... +++  ..++|+|++|+|++
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~-~~~~~g~~~~-~~~--~~~~~i~v~Dva~a  233 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKA-LVLVLGKKEQ-IGV--TRFHMVHVDDVARA  233 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHH-THHHHSCGGG-CCE--EEEEEEEHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHH-HHHHhCCCcc-CcC--CCcCEEEHHHHHHH
Confidence             699999999999999887789999999999999997532211222222 2234454332 222  23489999999999


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       234 ~~~  236 (322)
T 2p4h_X          234 HIY  236 (322)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.96  E-value=2.7e-28  Score=221.49  Aligned_cols=188  Identities=17%  Similarity=0.101  Sum_probs=149.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~  194 (340)
                      .+|+|||||| ||||++|+++|+++|++|++++|+......     +...+++++.+|+.+..+.++|+|||+|+.....
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~   77 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-----IRASGAEPLLWPGEEPSLDGVTHLLISTAPDSGG   77 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-----HHHTTEEEEESSSSCCCCTTCCEEEECCCCBTTB
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-----HhhCCCeEEEecccccccCCCCEEEECCCccccc
Confidence            3579999998 999999999999999999999996533211     1124678888888775577899999999864321


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHH--cCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKR--VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~--~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                          +         ..+.+++++|++  .++ +|||+||.++||.....+.+|+     .+..|.+.|+.+|+.+|.+++
T Consensus        78 ----~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~~~  139 (286)
T 3ius_A           78 ----D---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET-----TPLTPTAARGRWRVMAEQQWQ  139 (286)
T ss_dssp             ----C---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT-----SCCCCCSHHHHHHHHHHHHHH
T ss_pred             ----c---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC-----CCCCCCCHHHHHHHHHHHHHH
Confidence                1         125688999988  565 8999999999998877778887     566777899999999999998


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+   .+++++++||+++||++...         +..+.++....+.++ ++.++|+|++|+|++++.
T Consensus       140 ~~---~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~  194 (286)
T 3ius_A          140 AV---PNLPLHVFRLAGIYGPGRGP---------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAA  194 (286)
T ss_dssp             HS---TTCCEEEEEECEEEBTTBSS---------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHH
T ss_pred             hh---cCCCEEEEeccceECCCchH---------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHH
Confidence            76   58999999999999997422         233456666676655 588999999999999875

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.96  E-value=5.5e-28  Score=221.06  Aligned_cols=197  Identities=17%  Similarity=0.180  Sum_probs=151.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC-
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH-  195 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~-  195 (340)
                      |||||||||||||++|+++|+++||+|++++|++...             ++...++....+.++|+|||+|+...... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------------~~~~~~~~~~~l~~~d~vihla~~~i~~~~   67 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------------RITWDELAASGLPSCDAAVNLAGENILNPL   67 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------EEEHHHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------------eeecchhhHhhccCCCEEEEeccCcccchh
Confidence            6899999999999999999999999999999964321             11112233456788999999998532111 


Q ss_pred             --C-cCChhhHHHHHHHHHHHHHHHHHHcCC---eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          196 --Y-KFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       196 --~-~~~~~~~~~~Nv~g~~~ll~~a~~~~~---~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                        + .......++.|+.++.+++++++..+.   +||++||+++||.....+.+|+     ++..+.+.|+..|...|..
T Consensus        68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~-----~p~~~~~~~~~~~~~~e~~  142 (298)
T 4b4o_A           68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDED-----SPGGDFDFFSNLVTKWEAA  142 (298)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTT-----CCCSCSSHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCccccc-----CCccccchhHHHHHHHHHH
Confidence              1 123456889999999999999999874   5899999999999888888888     5667778888888877765


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .  .....+++++++||+.|||++.     ..+..+......+. ...++++++.++|||++|++++++.
T Consensus       143 ~--~~~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~~-~~~~g~g~~~~~~ihv~Dva~a~~~  204 (298)
T 4b4o_A          143 A--RLPGDSTRQVVVRSGVVLGRGG-----GAMGHMLLPFRLGL-GGPIGSGHQFFPWIHIGDLAGILTH  204 (298)
T ss_dssp             H--CCSSSSSEEEEEEECEEECTTS-----HHHHHHHHHHHTTC-CCCBTTSCSBCCEEEHHHHHHHHHH
T ss_pred             H--HhhccCCceeeeeeeeEEcCCC-----CchhHHHHHHhcCC-cceecccCceeecCcHHHHHHHHHH
Confidence            3  2244689999999999999863     34455555554444 3446899999999999999999865

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.96  E-value=5.2e-28  Score=246.12  Aligned_cols=221  Identities=26%  Similarity=0.431  Sum_probs=164.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc--cccCCCceEEeeCccccc-----ccC--CCCE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--HHFGNPNFELIRHDVVEP-----LLL--EVDQ  183 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~-----~~~--~~D~  183 (340)
                      .+++|+||||||+||||++|+++|+++|++|++++|..........  ..+...++.++.+|+.++     .+.  ++|+
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            4567899999999999999999999999999999987543221111  011124577888888764     234  7999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCC----CCCCCCCCCCCCCCCCCCCh
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL----QHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~----~~~~~E~~~~~~~~~~~~~~  258 (340)
                      |||+||.........++...+++|+.++.+++++|++.++ +||++||.++||...    ..+.+|+     .+..+.+.
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~-----~~~~p~~~  162 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNP  162 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCcccc-----CCCCCCCh
Confidence            9999996532223345677899999999999999999886 899999999998643    2455565     45566789


Q ss_pred             HHHHHHHHHHHHHHHHHh--hCCcEEEEEeCceeCCCCCC----C----CccHHHHHHHHHHhC--CCeEEec------C
Q 019470          259 YDEGKRTAETLTMDYHRG--AGVEVRIARIFNTYGPRMCI----D----DGRVVSNFVAQALRK--EPLTVYG------D  320 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~--~gi~~~ivRp~~i~G~~~~~----~----~~~~~~~~~~~~~~~--~~~~~~~------~  320 (340)
                      |+.+|+++|.+++.++.+  .+++++++||+++||++...    .    ...++..+ ..+..+  +++.+++      +
T Consensus       163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~  241 (699)
T 1z45_A          163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYM-AQVAVGRREKLYIFGDDYDSRD  241 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHH-HHHHTTSSSCCCCC------CC
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHH-HHHHhcCCCceEEeCCcccCCC
Confidence            999999999999998776  69999999999999985321    0    12345544 344433  4566666      6


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++.++|+|++|+|++++.
T Consensus       242 g~~~~~~i~v~Dva~a~~~  260 (699)
T 1z45_A          242 GTPIRDYIHVVDLAKGHIA  260 (699)
T ss_dssp             SSCEECEEEHHHHHHHHHH
T ss_pred             CCeeEeeEEHHHHHHHHHH
Confidence            7889999999999998864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=6.5e-28  Score=231.67  Aligned_cols=219  Identities=21%  Similarity=0.175  Sum_probs=162.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc--cc----ccc-------ccCCCceEEeeCccccc---
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--EN----VMH-------HFGNPNFELIRHDVVEP---  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~----~~~-------~~~~~~~~~~~~D~~~~---  176 (340)
                      ...+|+|||||||||||++|+++|+++|++|++++|+.....  +.    +..       .....++.++.+|+.++   
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            346779999999999999999999999999999999765211  00    000       01125788888888773   


Q ss_pred             -ccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCC-----CCCCCCCCCCCCC
Q 019470          177 -LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP-----LQHPQKETYWGNV  250 (340)
Q Consensus       177 -~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~-----~~~~~~E~~~~~~  250 (340)
                       .+.++|+|||+||...   ...++...+++|+.++.+++++|++.+.+|||+||.++ |..     ...+++|+++.. 
T Consensus       146 ~~~~~~d~Vih~A~~~~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~-  220 (427)
T 4f6c_A          146 VLPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK-  220 (427)
T ss_dssp             CCSSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS-
T ss_pred             CCcCCCCEEEECCcccC---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCcccccccccc-
Confidence             3457999999998653   34567889999999999999999994459999999988 542     345567765422 


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC-----CccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID-----DGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                       +..+.+.|+.+|+.+|.+++.+.+ .|++++++|||+|||+.....     ...++..++..+.++..+.. ++++..+
T Consensus       221 -~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  297 (427)
T 4f6c_A          221 -GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPV  297 (427)
T ss_dssp             -SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEE
T ss_pred             -CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceE
Confidence             233668999999999999999864 699999999999999975321     12346778888888776654 4467899


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      +|++++|+|++++.
T Consensus       298 ~~v~v~DvA~ai~~  311 (427)
T 4f6c_A          298 DFSFVDTTARQIVA  311 (427)
T ss_dssp             CCEEHHHHHHHHHH
T ss_pred             EEeeHHHHHHHHHH
Confidence            99999999999875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.95  E-value=9e-28  Score=235.72  Aligned_cols=217  Identities=21%  Similarity=0.157  Sum_probs=161.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc--c----cc-------cccCCCceEEeeCccccc-c---
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE--N----VM-------HHFGNPNFELIRHDVVEP-L---  177 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~--~----~~-------~~~~~~~~~~~~~D~~~~-~---  177 (340)
                      .+|+|||||||||||++|+++|+++|++|++++|.......  .    +.       ......+++++.+|+.++ .   
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~  228 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL  228 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCC
Confidence            46799999999999999999999999999999997652110  0    00       011235789999999873 2   


Q ss_pred             cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCC-----CCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP-----LQHPQKETYWGNVNP  252 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~-----~~~~~~E~~~~~~~~  252 (340)
                      ..++|+|||+||...   ...++...+++|+.++.+++++|++.+.+|||+||.++ |..     ...+++|+++..  +
T Consensus       229 ~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~--~  302 (508)
T 4f6l_B          229 PENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK--G  302 (508)
T ss_dssp             SSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS--S
T ss_pred             ccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccc--c
Confidence            357999999998643   44567788899999999999999995569999999988 432     344566765421  1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC-----CccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID-----DGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                      ..+.+.|+.+|+.+|.+++.+.+ .|++++++||++|||++....     ...++..++..+.+.+.+.. +++++.++|
T Consensus       303 ~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~  380 (508)
T 4f6l_B          303 QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDF  380 (508)
T ss_dssp             BCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEEC
T ss_pred             ccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEE
Confidence            23668999999999999999754 699999999999999975321     12346677777777665553 446889999


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      +|++|+|++++.
T Consensus       381 v~v~DvA~ai~~  392 (508)
T 4f6l_B          381 SFVDTTARQIVA  392 (508)
T ss_dssp             EEHHHHHHHHHH
T ss_pred             EcHHHHHHHHHH
Confidence            999999999875

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.95  E-value=1.5e-27  Score=234.53  Aligned_cols=201  Identities=20%  Similarity=0.128  Sum_probs=151.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~  195 (340)
                      +|+|||||||||||++|++.|+++|++|++++|+......          +.+-..|.....+.++|+|||+||......
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~----------v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~  216 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK----------RFWDPLNPASDLLDGADVLVHLAGEPIFGR  216 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC----------EECCTTSCCTTTTTTCSEEEECCCC-----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc----------eeecccchhHHhcCCCCEEEECCCCccccc
Confidence            7899999999999999999999999999999997553211          111111233456678999999999754322


Q ss_pred             -CcCChhhHHHHHHHHHHHHHHH-HHHcCC-eEEEEeCccccc-CCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          196 -YKFNPVKTIKTNVVGTLNMLGL-AKRVGA-RFLLTSTSEVYG-DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       196 -~~~~~~~~~~~Nv~g~~~ll~~-a~~~~~-~~i~~SS~~v~g-~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                       ...++..++++|+.++.+++++ +++.++ +|||+||+++|| .....+++|+.     +. +.+.|+.+|...|.++.
T Consensus       217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~-----~~-~~~~y~~~~~~~E~~~~  290 (516)
T 3oh8_A          217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEES-----ES-GDDFLAEVCRDWEHATA  290 (516)
T ss_dssp             CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTS-----CC-CSSHHHHHHHHHHHTTH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCC-----CC-CcChHHHHHHHHHHHHH
Confidence             3345778899999999999999 566666 899999999998 55555677763     33 56889999999998865


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+ .+.|++++++||++|||++.     .++..+...+..+.. ..++++++.++|+|++|+|++++.
T Consensus       291 ~~-~~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~  351 (516)
T 3oh8_A          291 PA-SDAGKRVAFIRTGVALSGRG-----GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYR  351 (516)
T ss_dssp             HH-HHTTCEEEEEEECEEEBTTB-----SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHH
T ss_pred             HH-HhCCCCEEEEEeeEEECCCC-----ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHH
Confidence            54 55699999999999999862     455555554444433 356889999999999999999875

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.95  E-value=4.3e-28  Score=228.45  Aligned_cols=179  Identities=27%  Similarity=0.353  Sum_probs=152.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~  195 (340)
                      |+|||||||||||++|+++|+++|+ +|++++|.                   .+.+..+..+.++|+|||+||....  
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~--   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRP--   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCC--
Confidence            5899999999999999999999999 99999884                   1112233445579999999997543  


Q ss_pred             CcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 019470          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY  273 (340)
Q Consensus       196 ~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~  273 (340)
                        .++...+++|+.++.+++++|++.++  +|||+||.++|+                    .+.|+.+|+.+|.+++.+
T Consensus        60 --~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------------~~~Y~~sK~~~E~~~~~~  117 (369)
T 3st7_A           60 --EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------------DNPYGESKLQGEQLLREY  117 (369)
T ss_dssp             --TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------------CSHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------------CCCchHHHHHHHHHHHHH
Confidence              34566678999999999999999984  799999999986                    268999999999999999


Q ss_pred             HHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          274 HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       274 ~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++.+++++++||+++||++...+...++..++..+.+++++.+ +++++.++|+|++|+|++++.
T Consensus       118 ~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~  182 (369)
T 3st7_A          118 AEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKR  182 (369)
T ss_dssp             HHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHH
T ss_pred             HHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHH
Confidence            98889999999999999998655556788999999999888775 577899999999999999875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=1.5e-27  Score=214.80  Aligned_cols=182  Identities=24%  Similarity=0.282  Sum_probs=148.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~  190 (340)
                      +|+||||||+||||++|+++|+++|++|++++|+.....        ..+++++.+|+.++     .+.++|+|||+||.
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~   73 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGV   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------CCCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence            458999999999999999999999999999999754311        13567888888764     45689999999986


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCC-CCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDP-LQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~-~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      .    ...++...+++|+.++.+++++|++.++ +|||+||..+|+.. ...+++|+     .+..+.+.|+.+|+.+|.
T Consensus        74 ~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e~  144 (267)
T 3ay3_A           74 S----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTE-----VPRRPDSLYGLSKCFGED  144 (267)
T ss_dssp             C----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             C----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHHH
Confidence            4    2456788999999999999999999886 99999999999864 34567776     556677899999999999


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++.+.++.+++++++||+++|+...                         +++..++|+|++|++++++.
T Consensus       145 ~~~~~~~~~gi~~~~lrp~~v~~~~~-------------------------~~~~~~~~~~~~dva~~~~~  190 (267)
T 3ay3_A          145 LASLYYHKFDIETLNIRIGSCFPKPK-------------------------DARMMATWLSVDDFMRLMKR  190 (267)
T ss_dssp             HHHHHHHTTCCCEEEEEECBCSSSCC-------------------------SHHHHHHBCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEEeceeecCCCC-------------------------CCCeeeccccHHHHHHHHHH
Confidence            99998877899999999999985310                         12235678999999988764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=1.7e-27  Score=210.58  Aligned_cols=185  Identities=17%  Similarity=0.198  Sum_probs=142.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCce-EEeeCccc---ccccCCCCEEEEc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-ELIRHDVV---EPLLLEVDQIYHL  187 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~D~~---~~~~~~~D~Vih~  187 (340)
                      ..+++|+|+||||||+||++++++|+++|++|++++|+.....+.     ...++ +++.+|+.   .+.+.++|+|||+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~   91 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL-----RERGASDIVVANLEEDFSHAFASIDAVVFA   91 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-----HHTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH-----HhCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence            467889999999999999999999999999999999975432221     11356 77888875   3456689999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      ||...    ..++...+++|+.++.+++++|++.++ +||++||.+.+..       |.     .+ .+.+.|+.+|+.+
T Consensus        92 ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~-----~~-~~~~~Y~~sK~~~  154 (236)
T 3e8x_A           92 AGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQ-----GP-MNMRHYLVAKRLA  154 (236)
T ss_dssp             CCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GG-----SC-GGGHHHHHHHHHH
T ss_pred             CCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CC-----Ch-hhhhhHHHHHHHH
Confidence            99643    356888999999999999999999986 8999999554321       11     11 3447899999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |.+++    +.+++++++|||.+||+..                 ...+....++...+++++++|+|++++.
T Consensus       155 e~~~~----~~gi~~~~lrpg~v~~~~~-----------------~~~~~~~~~~~~~~~~i~~~Dva~~~~~  206 (236)
T 3e8x_A          155 DDELK----RSSLDYTIVRPGPLSNEES-----------------TGKVTVSPHFSEITRSITRHDVAKVIAE  206 (236)
T ss_dssp             HHHHH----HSSSEEEEEEECSEECSCC-----------------CSEEEEESSCSCCCCCEEHHHHHHHHHH
T ss_pred             HHHHH----HCCCCEEEEeCCcccCCCC-----------------CCeEEeccCCCcccCcEeHHHHHHHHHH
Confidence            99885    5699999999999999852                 1223334555667899999999999875

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.95  E-value=9.3e-27  Score=218.26  Aligned_cols=204  Identities=14%  Similarity=0.054  Sum_probs=156.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-----CeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCC---CC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-----DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLE---VD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~---~D  182 (340)
                      +|+|||||||||||++|+++|+++|     ++|++++|......      ....+++++.+|+.+.     .+.+   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            3689999999999999999999999     99999999754432      1234678888998764     3455   99


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc--CC-eEE-------EEeCcccccCC--CCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--GA-RFL-------LTSTSEVYGDP--LQHPQKETYWGNV  250 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--~~-~~i-------~~SS~~v~g~~--~~~~~~E~~~~~~  250 (340)
                      +|||+||...     .++...+++|+.++.+++++|++.  ++ +||       |+||.++||..  ...+++|+++   
T Consensus        75 ~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~---  146 (364)
T 2v6g_A           75 HVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP---  146 (364)
T ss_dssp             EEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC---
T ss_pred             EEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCcccc---
Confidence            9999998642     467889999999999999999998  55 787       79999999875  3456777742   


Q ss_pred             CCCCC-CChHHHHHHHHHHHHHHHHHhhC-CcEEEEEeCceeCCCCCCCCccHHHHH-HHHH--HhCCCeEEecCCc---
Q 019470          251 NPIGV-RSCYDEGKRTAETLTMDYHRGAG-VEVRIARIFNTYGPRMCIDDGRVVSNF-VAQA--LRKEPLTVYGDGK---  322 (340)
Q Consensus       251 ~~~~~-~~~Y~~sK~~~E~~v~~~~~~~g-i~~~ivRp~~i~G~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~g~---  322 (340)
                        ..+ .+.|    ..+|.+++++.++++ ++++++||++|||++.......++..+ +..+  .++.++.++++++   
T Consensus       147 --~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  220 (364)
T 2v6g_A          147 --RLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWD  220 (364)
T ss_dssp             --CCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHH
T ss_pred             --CCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccc
Confidence              222 4678    458999988877676 999999999999997642223344443 3334  2677777778773   


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ...+++|++|+|++++.
T Consensus       221 ~~~~~~~v~Dva~a~~~  237 (364)
T 2v6g_A          221 GYSDCSDADLIAEHHIW  237 (364)
T ss_dssp             SCBCCEEHHHHHHHHHH
T ss_pred             ccCCCCcHHHHHHHHHH
Confidence            44788899999999875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.95  E-value=3.6e-27  Score=212.43  Aligned_cols=188  Identities=17%  Similarity=0.136  Sum_probs=149.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC--CCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL--EVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~--~~D~Vih~Ag  189 (340)
                      |+|+||||+||||++++++|+ +|++|++++|+....          .+   +.+|+.++     .+.  ++|+|||+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            479999999999999999999 489999999975321          11   56677653     233  3999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      .........++...+++|+.++.+++++|++.+++||++||.++|+.... +.+|+     .+..+.+.|+.+|+.+|.+
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~-----~~~~~~~~Y~~sK~~~e~~  140 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEE-----DIPNPINYYGLSKLLGETF  140 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTT-----SCCCCSSHHHHHHHHHHHH
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCC-----CCCCCCCHHHHHHHHHHHH
Confidence            65432234578889999999999999999998889999999999976533 66676     4556678999999999999


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.      ++++++||+.+||+      ..+...++..+.+++++..+++   .++++|++|+|++++.
T Consensus       141 ~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~  195 (273)
T 2ggs_A          141 ALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILE  195 (273)
T ss_dssp             HCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHH
T ss_pred             HhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHH
Confidence            865      67899999999983      2455666677777877777654   7899999999999875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=1.4e-26  Score=202.00  Aligned_cols=190  Identities=15%  Similarity=0.193  Sum_probs=125.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc---ccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~D~Vih~Ag~~~~  193 (340)
                      |+|||||||||||++|+++|+++|++|++++|+......     +. .+++++.+|+.++   .+.++|+|||+||....
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-----TH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPD   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-----HC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-----cc-CCCeEEeccccChhhhhhcCCCEEEECCcCCcc
Confidence            589999999999999999999999999999996533211     11 4678899998775   56789999999986321


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCccc-ccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEV-YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v-~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                               ....|+.++.+++++|++.++ +||++||.++ |+.....+..|+     .+..+.+.|+.+|...|.+ .
T Consensus        75 ---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-----~~~~~~~~y~~~k~~~e~~-~  139 (221)
T 3ew7_A           75 ---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLES-----KGLREAPYYPTARAQAKQL-E  139 (221)
T ss_dssp             ---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC------------------------CCCSCCHHHHHHHH-H
T ss_pred             ---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCcccccc-----CCCCCHHHHHHHHHHHHHH-H
Confidence                     134799999999999999975 9999999765 444443344444     4445567899999999997 3


Q ss_pred             HHHH-hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          272 DYHR-GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~-~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+.+ +.+++++++||+.+||++..  ...    +   ...+..+...+++   .++++++|+|++++.
T Consensus       140 ~~~~~~~gi~~~ivrp~~v~g~~~~--~~~----~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~  196 (221)
T 3ew7_A          140 HLKSHQAEFSWTYISPSAMFEPGER--TGD----Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLD  196 (221)
T ss_dssp             HHHTTTTTSCEEEEECSSCCCCC---------------------------------CCCHHHHHHHHHH
T ss_pred             HHHhhccCccEEEEeCcceecCCCc--cCc----e---EeccccceecCCC---CceEeHHHHHHHHHH
Confidence            4443 67999999999999998421  111    1   1123334444443   369999999999875

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.93  E-value=3.8e-26  Score=199.53  Aligned_cols=176  Identities=16%  Similarity=0.201  Sum_probs=138.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-c-----ccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-P-----LLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~-----~~~~~D~Vih~Ag~  190 (340)
                      |+|+|||||||||++++++|+++|++|++++|+.......       .+++++.+|+.+ +     .+.++|+|||+||.
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~   73 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS   73 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence            4899999999999999999999999999999975432211       578899999887 3     46789999999996


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ...        ..+++|+.++.+++++|++.++ +||++||.++++..   +..|      .+..+.+.|+.+|+.+|.+
T Consensus        74 ~~~--------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e------~~~~~~~~Y~~sK~~~e~~  136 (219)
T 3dqp_A           74 GGK--------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG------AGFDALKDYYIAKHFADLY  136 (219)
T ss_dssp             TTS--------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS------HHHHHTHHHHHHHHHHHHH
T ss_pred             CCC--------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc------cccccccHHHHHHHHHHHH
Confidence            431        2556899999999999999996 89999998776532   2222      1223457899999999999


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++   +..+++++++||+.+||+...   +.              +. .  ++..+++++++|+|++++.
T Consensus       137 ~~---~~~~i~~~ilrp~~v~g~~~~---~~--------------~~-~--~~~~~~~i~~~Dva~~i~~  183 (219)
T 3dqp_A          137 LT---KETNLDYTIIQPGALTEEEAT---GL--------------ID-I--NDEVSASNTIGDVADTIKE  183 (219)
T ss_dssp             HH---HSCCCEEEEEEECSEECSCCC---SE--------------EE-E--SSSCCCCEEHHHHHHHHHH
T ss_pred             HH---hccCCcEEEEeCceEecCCCC---Cc--------------cc-c--CCCcCCcccHHHHHHHHHH
Confidence            86   456999999999999998531   11              11 1  2567899999999999875

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.93  E-value=1.8e-26  Score=201.88  Aligned_cols=192  Identities=14%  Similarity=0.041  Sum_probs=138.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc---ccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~D~Vih~Ag~~~~  193 (340)
                      |+|||||||||||++|+++|+++|++|++++|+.....     .+...+++++.+|+.++   .+.++|+|||+||....
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-----DRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWG   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-----HHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccc-----cccCCCceEEecccccccHhhcccCCEEEECCccCCC
Confidence            57999999999999999999999999999999643321     11235788899998775   46789999999997411


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc-CCCCC--CCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG-DPLQH--PQKETYWGNVNPIGVRSCYDEGKRTAETLT  270 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g-~~~~~--~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v  270 (340)
                          .   .....|+.++.+++++|++.+.+||++||++.+. .....  +.+|.     ....+.+.|+.+|+.+|.+ 
T Consensus        76 ----~---~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~-----~~~~~~~~y~~sK~~~e~~-  142 (224)
T 3h2s_A           76 ----S---GRGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFP-----ESAASQPWYDGALYQYYEY-  142 (224)
T ss_dssp             ----S---SCTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCC-----GGGGGSTTHHHHHHHHHHH-
T ss_pred             ----c---chhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCC-----CCCccchhhHHHHHHHHHH-
Confidence                1   1236899999999999999988999999975443 33322  22222     2223357899999999954 


Q ss_pred             HHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          271 MDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       271 ~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +.+.++.+++++++||+.+||++...   .+.       .....+.   .+...+++++++|+|++++.
T Consensus       143 ~~~~~~~~i~~~ivrp~~v~g~~~~~---~~~-------~~~~~~~---~~~~~~~~i~~~DvA~~~~~  198 (224)
T 3h2s_A          143 QFLQMNANVNWIGISPSEAFPSGPAT---SYV-------AGKDTLL---VGEDGQSHITTGNMALAILD  198 (224)
T ss_dssp             HHHTTCTTSCEEEEEECSBCCCCCCC---CEE-------EESSBCC---CCTTSCCBCCHHHHHHHHHH
T ss_pred             HHHHhcCCCcEEEEcCccccCCCccc---Cce-------ecccccc---cCCCCCceEeHHHHHHHHHH
Confidence            55555679999999999999985311   110       0111111   12345689999999999875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=7e-25  Score=194.14  Aligned_cols=188  Identities=16%  Similarity=0.073  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      +++|+|+||||+|+||++++++|+++|+  +|++++|+........     ...+.++.+|+.++     .+.++|+|||
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            4567999999999999999999999999  9999999764432211     12567777887653     4568999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      |||....   ..+++..+++|+.++.++++++++.++ +||++||.++|+.                  +.+.|+.+|+.
T Consensus        91 ~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------------~~~~Y~~sK~~  149 (242)
T 2bka_A           91 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFLYLQVKGE  149 (242)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHH
T ss_pred             CCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------------CcchHHHHHHH
Confidence            9985321   224577889999999999999999886 9999999988752                  12579999999


Q ss_pred             HHHHHHHHHHhhCC-cEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          266 AETLTMDYHRGAGV-EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       266 ~E~~v~~~~~~~gi-~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .|.+++.    .++ +++++|||.+||+...   ......+........+. .++    ...+++++|+|++++.
T Consensus       150 ~e~~~~~----~~~~~~~~vrpg~v~~~~~~---~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~dva~~~~~  212 (242)
T 2bka_A          150 VEAKVEE----LKFDRYSVFRPGVLLCDRQE---SRPGEWLVRKFFGSLPD-SWA----SGHSVPVVTVVRAMLN  212 (242)
T ss_dssp             HHHHHHT----TCCSEEEEEECCEEECTTGG---GSHHHHHHHHHHCSCCT-TGG----GGTEEEHHHHHHHHHH
T ss_pred             HHHHHHh----cCCCCeEEEcCceecCCCCC---CcHHHHHHHHhhcccCc-ccc----CCcccCHHHHHHHHHH
Confidence            9998854    478 5999999999998632   22333333333332221 111    2358999999999875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.92  E-value=2.6e-25  Score=193.15  Aligned_cols=181  Identities=20%  Similarity=0.182  Sum_probs=137.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCcccccc-cCC--CCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-LLE--VDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~--~D~Vih~Ag  189 (340)
                      .+|+|+||||+|+||++++++|+++|+  +|++++|+...         ...+++++.+|+.+.. +..  +|+|||+||
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~   74 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGSIDTAFCCLG   74 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhhhcEEEECee
Confidence            457999999999999999999999998  99999997543         1235677777776532 111  899999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      ....  ...+++..+++|+.++.+++++|++.++ +||++||.++|+.                  +.+.|+.+|+.+|.
T Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------------~~~~y~~sK~~~e~  134 (215)
T 2a35_A           75 TTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELEQ  134 (215)
T ss_dssp             CCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHHH
T ss_pred             eccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------------CccHHHHHHHHHHH
Confidence            6421  2356788999999999999999999987 8999999988752                  12689999999999


Q ss_pred             HHHHHHHhhCCc-EEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          269 LTMDYHRGAGVE-VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       269 ~v~~~~~~~gi~-~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++.    .+++ ++++||+.+||+...   ..+...+    . +.... .+++  .++++|++|+|++++.
T Consensus       135 ~~~~----~~~~~~~~vrp~~v~g~~~~---~~~~~~~----~-~~~~~-~~~~--~~~~i~~~Dva~~~~~  191 (215)
T 2a35_A          135 ALQE----QGWPQLTIARPSLLFGPREE---FRLAEIL----A-APIAR-ILPG--KYHGIEACDLARALWR  191 (215)
T ss_dssp             HHTT----SCCSEEEEEECCSEESTTSC---EEGGGGT----T-CCCC-----C--HHHHHHHHHHHHHHHH
T ss_pred             HHHH----cCCCeEEEEeCceeeCCCCc---chHHHHH----H-Hhhhh-ccCC--CcCcEeHHHHHHHHHH
Confidence            9854    4899 999999999999742   2222221    1 22222 2232  6799999999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.91  E-value=6.1e-25  Score=199.34  Aligned_cols=176  Identities=14%  Similarity=0.154  Sum_probs=134.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag  189 (340)
                      |+|||||||||||++++++|+++  |++|++++|+...... +    ...+++++.+|+.++     .+.++|+|||+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l----~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-L----ADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-H----HHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-H----hhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            47999999999999999999999  9999999997543221 1    113567888888764     4678999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      ..    ..    .  ++|+.++.+++++|++.++ +|||+||.++|..               +    ..|+.+|..+|.
T Consensus        76 ~~----~~----~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---------------~----~~y~~~K~~~E~  126 (287)
T 2jl1_A           76 PH----YD----N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES---------------I----IPLAHVHLATEY  126 (287)
T ss_dssp             CC----SC----H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC---------------C----STHHHHHHHHHH
T ss_pred             CC----cC----c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---------------C----CchHHHHHHHHH
Confidence            52    11    1  5799999999999999997 9999999887621               1    369999999999


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++    +.+++++++||+.++|+..    ..    ++...++..... ++.+++.++|+|++|++++++.
T Consensus       127 ~~~----~~~~~~~ilrp~~~~~~~~----~~----~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~  184 (287)
T 2jl1_A          127 AIR----TTNIPYTFLRNALYTDFFV----NE----GLRASTESGAIV-TNAGSGIVNSVTRNELALAAAT  184 (287)
T ss_dssp             HHH----HTTCCEEEEEECCBHHHHS----SG----GGHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHH
T ss_pred             HHH----HcCCCeEEEECCEeccccc----hh----hHHHHhhCCcee-ccCCCCccCccCHHHHHHHHHH
Confidence            885    3699999999999888631    11    222333333333 4566788999999999999865

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.91  E-value=7.4e-25  Score=198.71  Aligned_cols=205  Identities=15%  Similarity=0.055  Sum_probs=139.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      .++|++|||||+|+||++++++|+++|++|++++|+.+...+... . ...++.++.+|+.+..            +.++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA-A-YPDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH-H-CTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-h-ccCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999999999997544332221 1 1346888999997742            1379


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHH----HHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLG----LAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~----~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |+||||||......    ..++++..+++|+.|+.++++    .+++.+. +||++||...+.                +
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~  144 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL----------------S  144 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------C
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC----------------C
Confidence            99999999753322    234577899999999555544    4466665 999999976542                2


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCc---cHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDG---RVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                      ..+.+.|+.+|++.|.+++.++.+   +|+++++++||.|.++.......   .....+..........   ........
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  221 (281)
T 3m1a_A          145 FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQL---VQGSDGSQ  221 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHH---HHC-----
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHH---HhhccCCC
Confidence            233478999999999999999887   69999999999998875321110   0011111111111111   11123346


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +.+++|+|++++.
T Consensus       222 ~~~~~dva~a~~~  234 (281)
T 3m1a_A          222 PGDPAKAAAAIRL  234 (281)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            8889999999864

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.91  E-value=3.4e-24  Score=190.05  Aligned_cols=197  Identities=19%  Similarity=0.108  Sum_probs=142.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c---CCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L---LEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~---~~~D~V  184 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+.. ...  .+++++.+|+.++.     +   .++|+|
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-KEC--PGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHS--TTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hhc--cCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            457789999999999999999999999999999999643222111 111  24566788887642     2   358999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |||||......    ..++++..+++|+.++.++++++...    +  .+||++||...+...                .
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~  144 (244)
T 1cyd_A           81 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF----------------P  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------------T
T ss_pred             EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC----------------C
Confidence            99999754322    22346789999999999999887653    4  389999998776421                2


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|++.|.+++.++.+   .+++++++|||.++++.....  .....++..+.++.+         .+++++++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~  213 (244)
T 1cyd_A          145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--SADPEFARKLKERHP---------LRKFAEVE  213 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--TCCHHHHHHHHHHST---------TSSCBCHH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--ccCHHHHHHHHhcCC---------ccCCCCHH
Confidence            2368999999999999998876   589999999999998742100  001223333433322         35799999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |++++++.
T Consensus       214 dva~~~~~  221 (244)
T 1cyd_A          214 DVVNSILF  221 (244)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.91  E-value=2.4e-24  Score=201.07  Aligned_cols=189  Identities=15%  Similarity=0.232  Sum_probs=140.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc--ccccCCCceEEeeCccccc-----ccC--CCCEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVEP-----LLL--EVDQI  184 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~--~~~~~~~~~~~~~~D~~~~-----~~~--~~D~V  184 (340)
                      +.+|+|||||||||||++|++.|+++|++|++++|.........  ...+...+++++.+|+.+.     .+.  ++|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            44679999999999999999999999999999999763322211  1112235788999998764     456  89999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHH
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEG  262 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~s  262 (340)
                      ||+|+.               .|+.++.+++++|++.+ + +||+ |   +||..    .+|.     .+..+.+.|+.+
T Consensus        88 i~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~-----~~~~p~~~y~~s  139 (346)
T 3i6i_A           88 VSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRA-----DPVEPGLNMYRE  139 (346)
T ss_dssp             EECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTC-----CCCTTHHHHHHH
T ss_pred             EECCch---------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCcc-----CcCCCcchHHHH
Confidence            999985               48899999999999999 7 5664 4   44432    2333     445566899999


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |+.+|.++++    .+++++++|||.++|....    .+.. .......++.+.+++++++.++|+|++|++++++.
T Consensus       140 K~~~e~~l~~----~g~~~tivrpg~~~g~~~~----~~~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~  207 (346)
T 3i6i_A          140 KRRVRQLVEE----SGIPFTYICCNSIASWPYY----NNIH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMK  207 (346)
T ss_dssp             HHHHHHHHHH----TTCCBEEEECCEESSCCCS----CC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHHH----cCCCEEEEEecccccccCc----cccc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHH
Confidence            9999998854    5899999999999997531    1111 11112255678889999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.90  E-value=9.5e-24  Score=189.34  Aligned_cols=205  Identities=17%  Similarity=0.147  Sum_probs=146.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+...+... .+ ...+.++.+|+.++.            +.+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   82 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA-EI-GPAAYAVQMDVTRQDSIDAAIAATVEHAGG   82 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh-CCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            4577899999999999999999999999999999986543322221 11 245788889987742            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc------CCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV------GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~------~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..+++++.+++|+.++.++++++...      +.+||++||...+..              
T Consensus        83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  148 (259)
T 4e6p_A           83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG--------------  148 (259)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC--------------
Confidence            999999999764333    23457788999999999999987543      238999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhC---CCeEEecCCcee
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK---EPLTVYGDGKQT  324 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~  324 (340)
                        ......|+.+|++.+.+++.++.+.   |+++++++||.|+++...     ....++......   +....+++..+.
T Consensus       149 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~  221 (259)
T 4e6p_A          149 --EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD-----GVDALFARYENRPRGEKKRLVGEAVPF  221 (259)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH-----HHHHHHHHHHTCCTTHHHHHHHHHSTT
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh-----hhhhhhhhhccCChHHHHHHHhccCCC
Confidence              1223689999999999999998764   899999999999998521     111122222111   111112233445


Q ss_pred             EccccHHHHHHHHHhC
Q 019470          325 RSFQFVSDLVRLTETI  340 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~~  340 (340)
                      ..+.+++|+|++++.+
T Consensus       222 ~r~~~~~dva~~v~~L  237 (259)
T 4e6p_A          222 GRMGTAEDLTGMAIFL  237 (259)
T ss_dssp             SSCBCTHHHHHHHHHT
T ss_pred             CCCcCHHHHHHHHHHH
Confidence            6799999999997643

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.90  E-value=3.4e-23  Score=178.29  Aligned_cols=180  Identities=14%  Similarity=0.141  Sum_probs=132.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~  190 (340)
                      +|+|+||||||+||++++++|+++|++|++++|+......     ....++.++.+|+.++     .+.++|+|||+||.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   77 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-----ccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence            3699999999999999999999999999999996543221     1134678888888764     45689999999986


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ...    .++   .++|+.++.+++++|++.++ +||++||.++|+.....+            .+.+.|+.+|..+|.+
T Consensus        78 ~~~----~~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~------------~~~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           78 RND----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP------------PRLQAVTDDHIRMHKV  138 (206)
T ss_dssp             TTC----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC------------GGGHHHHHHHHHHHHH
T ss_pred             CCC----CCc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc------------ccchhHHHHHHHHHHH
Confidence            543    112   23899999999999999886 899999999887533211            0347899999999998


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      ++    +.+++++++||+.+ +++..  ...+             ...+.+ ....++++++|+|++++.+
T Consensus       139 ~~----~~~i~~~~lrp~~~-~~~~~--~~~~-------------~~~~~~-~~~~~~i~~~Dva~~~~~~  188 (206)
T 1hdo_A          139 LR----ESGLKYVAVMPPHI-GDQPL--TGAY-------------TVTLDG-RGPSRVISKHDLGHFMLRC  188 (206)
T ss_dssp             HH----HTCSEEEEECCSEE-ECCCC--CSCC-------------EEESSS-CSSCSEEEHHHHHHHHHHT
T ss_pred             HH----hCCCCEEEEeCCcc-cCCCC--Ccce-------------EecccC-CCCCCccCHHHHHHHHHHH
Confidence            84    46899999999998 33311  1111             011111 1104899999999998753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.90  E-value=2e-24  Score=192.32  Aligned_cols=199  Identities=14%  Similarity=0.053  Sum_probs=134.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----ccc----CCCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLL----LEVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~----~~~D~Vih  186 (340)
                      ||+||||||+||||++++++|+++|++|++++|+......       .     +.+|+.+     ..+    .++|+|||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~-----~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------D-----LSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-----TTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------c-----ccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            4689999999999999999999999999999997543211       0     3444433     223    37999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCC-CCCCCCC-C--------CC
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHP-QKETYWG-N--------VN  251 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~-~~E~~~~-~--------~~  251 (340)
                      |||....   ..+++..+++|+.++.++++++.+.    + .+||++||..+|+.....+ ..|..+. +        ..
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (255)
T 2dkn_A           69 CAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ  145 (255)
T ss_dssp             CCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccc
Confidence            9996431   3568899999999999999988654    4 4899999998886432111 0000000 0        00


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                      +..+.+.|+.+|++.|.+++.++++   .|++++++|||.++|+..        ..++.....+.....+. + ...+++
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~--------~~~~~~~~~~~~~~~~~-~-~~~~~~  215 (255)
T 2dkn_A          146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL--------QASKADPRYGESTRRFV-A-PLGRGS  215 (255)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH--------HHHHHCTTTHHHHHSCC-C-TTSSCB
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh--------hhcccchhhHHHHHHHH-H-HhcCCC
Confidence            0123468999999999999998776   599999999999999742        11111000000000000 1 345799


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       216 ~~~dva~~~~~  226 (255)
T 2dkn_A          216 EPREVAEAIAF  226 (255)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.90  E-value=1.3e-22  Score=183.27  Aligned_cols=197  Identities=17%  Similarity=0.097  Sum_probs=145.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+...+.... + ..++..+.+|+.++.            +.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B            8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS-V-GRGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHH-H-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-h-CCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56788999999999999999999999999999999976543332221 2 346778888987742            237


Q ss_pred             CCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +|++|||||......      ..++++..+++|+.++.++++++    ++.+. +||++||...+..             
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------------  152 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA-------------  152 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB-------------
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC-------------
Confidence            999999999763211      23457789999999999999988    55554 9999999776521             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|++.+.+++.++.+   +|+++++++||.|+++....   .....+...+....+.         ..
T Consensus       153 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~---------~r  217 (271)
T 3tzq_B          153 ---YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV---GLPQPIVDIFATHHLA---------GR  217 (271)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC------CHHHHHHHHTTSTT---------SS
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccc---cCCHHHHHHHHhcCCC---------CC
Confidence               123368999999999999999887   69999999999999986421   1112233333332221         23


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +..++|+|++++.
T Consensus       218 ~~~p~dvA~~v~~  230 (271)
T 3tzq_B          218 IGEPHEIAELVCF  230 (271)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            6788999998764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=3.7e-23  Score=183.61  Aligned_cols=191  Identities=14%  Similarity=0.123  Sum_probs=134.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      ++|+|+||||+|+||++++++|+++  |++|++++|+..... .+     ..++.++.+|+.+.     .+.++|+|||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI-----GGEADVFIGDITDADSINPAFQGIDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT-----TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hc-----CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            5679999999999999999999999  899999999643211 11     23566778888663     45689999999


Q ss_pred             ccCCCCCC-------------CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          188 ACPASPVH-------------YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       188 Ag~~~~~~-------------~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      ||......             ..+.+...+++|+.++.+++++|++.++ +||++||.+++...  .+.        .+.
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~--~~~--------~~~  146 (253)
T 1xq6_A           77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPD--HPL--------NKL  146 (253)
T ss_dssp             CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTT--CGG--------GGG
T ss_pred             ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCC--Ccc--------ccc
Confidence            99653210             1122345789999999999999999886 89999998765211  000        000


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                       ..+.|+.+|+.+|.+++    +.+++++++||+.+||+....  ...        ..+....++++   ..++++++|+
T Consensus       147 -~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~--~~~--------~~~~~~~~~~~---~~~~~~~~Dv  208 (253)
T 1xq6_A          147 -GNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGV--REL--------LVGKDDELLQT---DTKTVPRADV  208 (253)
T ss_dssp             -GGCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSS--SCE--------EEESTTGGGGS---SCCEEEHHHH
T ss_pred             -cchhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcch--hhh--------hccCCcCCcCC---CCcEEcHHHH
Confidence             11458889999999875    369999999999999986321  000        01111111111   2468999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |++++.
T Consensus       209 a~~~~~  214 (253)
T 1xq6_A          209 AEVCIQ  214 (253)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999865

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.90  E-value=2.4e-23  Score=185.68  Aligned_cols=199  Identities=15%  Similarity=0.106  Sum_probs=144.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----c-------C
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----L-------L  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~-------~  179 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.     +       .
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            467789999999999999999999999999999999653322111110 01246778889987642     1       2


Q ss_pred             CCCEEEEcccCCCCCC---CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~---~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+||||||......   ..++++..+++|+.++.++++++.    +.+. +||++||...+..               
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  152 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK---------------  152 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---------------
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC---------------
Confidence            7999999999754322   223467899999999999998884    3454 8999999876632               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ..+...|+.+|++.|.+++.++.+.   +++++++|||.++++....   .....+...+..+.++         ..++
T Consensus       153 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~---------~~~~  219 (255)
T 1fmc_A          153 -NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS---VITPEIEQKMLQHTPI---------RRLG  219 (255)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCCHHHHHHHHHTCSS---------CSCB
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh---ccChHHHHHHHhcCCc---------ccCC
Confidence             1233689999999999999988764   8999999999999874211   1113334444444332         3478


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       220 ~~~dva~~~~~  230 (255)
T 1fmc_A          220 QPQDIANAALF  230 (255)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.90  E-value=6.4e-23  Score=184.16  Aligned_cols=189  Identities=15%  Similarity=0.096  Sum_probs=143.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ..++|++|||||+|+||.+++++|+++|++|++++|+....        ....+.++.+|+.++.            +.+
T Consensus        25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------ADPDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------SSTTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------ccCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            46778999999999999999999999999999999965432        1236788899997752            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.|+.++++++    ++.+. ++|++||...+...              
T Consensus        97 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------  162 (260)
T 3un1_A           97 IDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM--------------  162 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB--------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC--------------
Confidence            999999999764433    22357789999999999999987    45554 89999997765321              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                      +..+...|+.+|++.+.+++.++.+.   |+++++++||.|+++...   ...    ...+...         .....+.
T Consensus       163 ~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~---~~~----~~~~~~~---------~p~~r~~  226 (260)
T 3un1_A          163 VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHP---AET----HSTLAGL---------HPVGRMG  226 (260)
T ss_dssp             TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSC---GGG----HHHHHTT---------STTSSCB
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCC---HHH----HHHHhcc---------CCCCCCc
Confidence            11233689999999999999999876   899999999999998632   111    1112222         2234578


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       227 ~~~dva~av~~  237 (260)
T 3un1_A          227 EIRDVVDAVLY  237 (260)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            89999999874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.90  E-value=2.4e-22  Score=181.50  Aligned_cols=204  Identities=17%  Similarity=0.177  Sum_probs=145.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|+++||||+|+||.+++++|+++|++|++++|+.....+ ....+ ...++.++.+|+.++.            +
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK-VCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHH-HHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35678899999999999999999999999999999986432221 11111 1226888999997742            1


Q ss_pred             CCCCEEEEcccCCCCC--C----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPV--H----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~--~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|+||||||.....  .    ..++++..+++|+.++.++++++...    +. +||++||...+....         
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  161 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------  161 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT---------
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC---------
Confidence            3799999999975321  1    12356789999999999999988663    44 899999988764311         


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                            .+...|+.+|++.|.+++.++.+   .|++++++|||.++++........ ...+...+....+       ...
T Consensus       162 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~-------~~~  227 (278)
T 2bgk_A          162 ------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-DSSRVEELAHQAA-------NLK  227 (278)
T ss_dssp             ------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-CHHHHHHHHHHTC-------SSC
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-chhHHHHhhhccc-------ccc
Confidence                  12367999999999999998876   589999999999999864221111 1122222222211       122


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+++++|+|++++.
T Consensus       228 ~~~~~~~dva~~~~~  242 (278)
T 2bgk_A          228 GTLLRAEDVADAVAY  242 (278)
T ss_dssp             SCCCCHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHH
Confidence            358999999998864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.89  E-value=7e-24  Score=192.09  Aligned_cols=172  Identities=14%  Similarity=0.145  Sum_probs=128.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~  190 (340)
                      +|||||||||||++++++|+++  |++|++++|+...... +.    ..+++++.+|+.++     .+.++|+|||+|+.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LA----AQGITVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hh----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999999  9999999997543221 11    13567888888764     46789999999984


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ..            +.|+.++.+++++|++.++ +||++||.++|.               .+    ..|+.+|..+|.+
T Consensus        76 ~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---------------~~----~~y~~sK~~~e~~  124 (286)
T 2zcu_A           76 EV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT---------------SP----LGLADEHIETEKM  124 (286)
T ss_dssp             ------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT---------------CC----STTHHHHHHHHHH
T ss_pred             Cc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---------------Cc----chhHHHHHHHHHH
Confidence            21            2588899999999999987 899999988761               11    4699999999998


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.    .+++++++||+.++++.         ..++..+.+++.+. ++++++.++|+|++|++++++.
T Consensus       125 ~~~----~~~~~~ilrp~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~  180 (286)
T 2zcu_A          125 LAD----SGIVYTLLRNGWYSENY---------LASAPAALEHGVFI-GAAGDGKIASATRADYAAAAAR  180 (286)
T ss_dssp             HHH----HCSEEEEEEECCBHHHH---------HTTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHH
T ss_pred             HHH----cCCCeEEEeChHHhhhh---------HHHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHH
Confidence            853    59999999998766542         12233344444444 5677888999999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.89  E-value=1.2e-22  Score=184.38  Aligned_cols=207  Identities=15%  Similarity=0.088  Sum_probs=141.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc---cCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.....+.....   .....+.++.+|+.++.            
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR  101 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            467789999999999999999999999999999998543322222111   12357888899997742            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|+||||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+..            
T Consensus       102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  169 (281)
T 3v2h_A          102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA------------  169 (281)
T ss_dssp             TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC------------
Confidence            237999999999765433    23357789999999999999987    34443 8999999765421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHH--HHHHhCCC-eEEecCCc
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFV--AQALRKEP-LTVYGDGK  322 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~g~  322 (340)
                          ......|+.+|++.+.+++.++.+.   |+++++++||.|.++....    ......  ......+. ...+.++.
T Consensus       170 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  241 (281)
T 3v2h_A          170 ----SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEK----QIPDQARTRGITEEQVINEVMLKGQ  241 (281)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------CC
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhh----hcchhhhhcCCCHHHHHHHHHHhcC
Confidence                1223689999999999999998764   8999999999999875311    001000  00000000 11233445


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ....+++++|+|++++.
T Consensus       242 p~~r~~~~edvA~~v~~  258 (281)
T 3v2h_A          242 PTKKFITVEQVASLALY  258 (281)
T ss_dssp             TTCSCBCHHHHHHHHHH
T ss_pred             CCCCccCHHHHHHHHHH
Confidence            56679999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.89  E-value=1.4e-22  Score=181.22  Aligned_cols=202  Identities=14%  Similarity=0.068  Sum_probs=143.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|+|+||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            +.
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467789999999999999999999999999999999643222111110 01346888999987742            13


Q ss_pred             CCCEEEEcccCCC-CCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||... ...    ..++++..+++|+.++.++++++..    .+. +||++||...+...            
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  157 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN------------  157 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC------------
Confidence            6999999999754 211    1234678899999999999988864    344 89999997654221            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                        +..+...|+.+|++.|.+++.++.+   .|++++++|||.++++....  ......+...+.++.+         ...
T Consensus       158 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~---------~~~  224 (260)
T 3awd_A          158 --RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--GMEKPELYDAWIAGTP---------MGR  224 (260)
T ss_dssp             --SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--HHTCHHHHHHHHHTCT---------TSS
T ss_pred             --CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--ccCChHHHHHHHhcCC---------cCC
Confidence              1122368999999999999999877   69999999999999986320  0001233334444322         134


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|++++++.
T Consensus       225 ~~~~~dva~~~~~  237 (260)
T 3awd_A          225 VGQPDEVASVVQF  237 (260)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            8899999998864

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.89  E-value=1.2e-22  Score=180.07  Aligned_cols=197  Identities=17%  Similarity=0.101  Sum_probs=140.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~V  184 (340)
                      ++++++|+||||+|+||++++++|+++|++|++++|+.+...+ +....  ...+++.+|+.++.        +.++|+|
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS-LVREC--PGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHS--TTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc--CCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            4577899999999999999999999999999999986432221 11111  24566788887642        2358999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |||||......    ..++++..+++|+.++.++++++...    +  .+||++||...+..                ..
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~  144 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA----------------VT  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------------CT
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC----------------CC
Confidence            99999754322    22346789999999999998887653    4  38999999776532                12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      +...|+.+|++.|.+++.++.+   .++++++++||.++++........  ..+...+.+..         ....+++++
T Consensus       145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~  213 (244)
T 3d3w_A          145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--PHKAKTMLNRI---------PLGKFAEVE  213 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS--TTHHHHHHHTC---------TTCSCBCHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC--hHHHHHHHhhC---------CCCCCcCHH
Confidence            2368999999999999998876   489999999999999753100000  01122222222         224689999


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+|++++.
T Consensus       214 dva~~~~~  221 (244)
T 3d3w_A          214 HVVNAILF  221 (244)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.89  E-value=3.4e-22  Score=178.92  Aligned_cols=196  Identities=18%  Similarity=0.170  Sum_probs=136.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...+ + ...+.++.+|+.++.            +.+
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-L-GAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-h-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46788999999999999999999999999999999976544332221 1 246788889997742            237


Q ss_pred             CCEEEEcccCCCCCC--------CcCChhhHHHHHHHHHHHHHHHHHHc----------C-CeEEEEeCcccccCCCCCC
Q 019470          181 VDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----------G-ARFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~--------~~~~~~~~~~~Nv~g~~~ll~~a~~~----------~-~~~i~~SS~~v~g~~~~~~  241 (340)
                      +|++|||||......        ..++++..+++|+.++.++++++...          + .+||++||...+..     
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~-----  156 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG-----  156 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-----
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC-----
Confidence            999999999764322        22457789999999999999988653          2 37999999775522     


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEe
Q 019470          242 QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  318 (340)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (340)
                                 ......|+.+|++.+.+++.++.+   +|+++++++||.|.++...    .....+...+..       
T Consensus       157 -----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~-------  214 (257)
T 3tpc_A          157 -----------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMA----GMPQDVQDALAA-------  214 (257)
T ss_dssp             -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------C-------
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhc----cCCHHHHHHHHh-------
Confidence                       122368999999999999999877   6899999999999887531    111111111111       


Q ss_pred             cCCcee-EccccHHHHHHHHHh
Q 019470          319 GDGKQT-RSFQFVSDLVRLTET  339 (340)
Q Consensus       319 ~~g~~~-~~~v~v~Dva~a~~~  339 (340)
                        .... ..+..++|++++++.
T Consensus       215 --~~p~~~r~~~~~dva~~v~~  234 (257)
T 3tpc_A          215 --SVPFPPRLGRAEEYAALVKH  234 (257)
T ss_dssp             --CSSSSCSCBCHHHHHHHHHH
T ss_pred             --cCCCCCCCCCHHHHHHHHHH
Confidence              1122 358899999998864

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.89  E-value=1.8e-22  Score=179.58  Aligned_cols=196  Identities=18%  Similarity=0.085  Sum_probs=143.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++|++|||||+|+||.+++++|+++|++|+++++......+.....+  ...++..+.+|+.++.            +.+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999999999885433222222111  2346788899997742            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+..               
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  147 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG---------------  147 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC---------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC---------------
Confidence            999999999764332    23457789999999999999988    44454 8999999664421               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+   +|+++++++||.|.++...    .+...+...+.++.++         ..+.
T Consensus       148 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~p~---------~r~~  213 (246)
T 3osu_A          148 -NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD----ALSDELKEQMLTQIPL---------ARFG  213 (246)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCS----CSCHHHHHHHHTTCTT---------CSCB
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccc----ccCHHHHHHHHhcCCC---------CCCc
Confidence             122368999999999999999874   5899999999999987532    1223444444444332         3477


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|++++++.
T Consensus       214 ~~~dva~~v~~  224 (246)
T 3osu_A          214 QDTDIANTVAF  224 (246)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            88999998764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.89  E-value=1.5e-22  Score=183.29  Aligned_cols=211  Identities=17%  Similarity=0.069  Sum_probs=147.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc--------ccccc---cc--cCCCceEEeeCcccccc--
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--------KENVM---HH--FGNPNFELIRHDVVEPL--  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~--------~~~~~---~~--~~~~~~~~~~~D~~~~~--  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+....        .+.+.   ..  ....++.++.+|+.++.  
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            56789999999999999999999999999999999863211        11110   00  01347888999997752  


Q ss_pred             ----------cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCC
Q 019470          178 ----------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       178 ----------~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~  241 (340)
                                +.++|++|||||........++++..+++|+.++.++++++..    .+  .+||++||...+....   
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  166 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG---  166 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC---
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc---
Confidence                      2379999999998655444567889999999999999998743    22  3899999976542110   


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHH-HhCCCeEE
Q 019470          242 QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQA-LRKEPLTV  317 (340)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~  317 (340)
                               .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++...   ......++... ........
T Consensus       167 ---------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~  234 (278)
T 3sx2_A          167 ---------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN---NEFTREWLAKMAAATDTPGA  234 (278)
T ss_dssp             ---------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS---SHHHHHHHHHHHHHCC--CT
T ss_pred             ---------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch---hhhHHHHHhhccchhhhhhh
Confidence                     111123579999999999999998764   799999999999998632   22222222222 22222222


Q ss_pred             ecCCceeEccccHHHHHHHHHh
Q 019470          318 YGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       318 ~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++... ..+++++|+|++++.
T Consensus       235 ~~~~~p-~~~~~p~dvA~~v~~  255 (278)
T 3sx2_A          235 MGNAMP-VEVLAPEDVANAVAW  255 (278)
T ss_dssp             TSCSSS-CSSBCHHHHHHHHHH
T ss_pred             hhhhcC-cCcCCHHHHHHHHHH
Confidence            333333 678999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.89  E-value=1.1e-22  Score=182.72  Aligned_cols=200  Identities=15%  Similarity=0.076  Sum_probs=128.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +.+++|+|+||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.+..            +
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3567889999999999999999999999999999999643322111110 01246788888987641            1


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       .++|+||||||......    ..++++..+++|+.++.++++++    ++.+ .+||++||...+..            
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  157 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS------------  157 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC------------
Confidence             57999999999754322    23357788999999999999988    4445 49999999775532            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                          ......|+.+|++.|.+++.++.+.   |++++++|||.++++....   .....+...+...         ....
T Consensus       158 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~---------~~~~  221 (266)
T 1xq1_A          158 ----ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA---VYDDEFKKVVISR---------KPLG  221 (266)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhh---hcCHHHHHHHHhc---------CCCC
Confidence                1223689999999999999988764   9999999999999985321   0001111111111         1123


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+++++|++++++.
T Consensus       222 ~~~~~~dva~~~~~  235 (266)
T 1xq1_A          222 RFGEPEEVSSLVAF  235 (266)
T ss_dssp             --CCGGGGHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            47889999998764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.89  E-value=1.3e-22  Score=181.96  Aligned_cols=197  Identities=18%  Similarity=0.106  Sum_probs=137.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC---------CCceEEeeCcccccc------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG---------NPNFELIRHDVVEPL------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~------  177 (340)
                      .+++++|+||||+|+||.+++++|+++|++|++++|+.+...+.. ..+.         ..++.++.+|+.+..      
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV-RLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-HHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            356789999999999999999999999999999999754322111 1111         145788889987642      


Q ss_pred             ------cCCC-CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCC
Q 019470          178 ------LLEV-DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQH  240 (340)
Q Consensus       178 ------~~~~-D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~  240 (340)
                            +.++ |+||||||......    ..++++..+++|+.++.++++++...    +  .+||++||...+..    
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG----  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC----
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC----
Confidence                  1245 99999999754322    23357789999999999999987653    3  38999999754321    


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEE
Q 019470          241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTV  317 (340)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (340)
                                  ..+...|+.+|++.|.+++.++.+   .|++++++|||.++++...    .+...+...+.++     
T Consensus       159 ------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~-----  217 (264)
T 2pd6_A          159 ------------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ----KVPQKVVDKITEM-----  217 (264)
T ss_dssp             ------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGG-----
T ss_pred             ------------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh----hcCHHHHHHHHHh-----
Confidence                        112368999999999999998876   6999999999999998631    1111111111111     


Q ss_pred             ecCCceeEccccHHHHHHHHHh
Q 019470          318 YGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       318 ~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                          .....+++++|++++++.
T Consensus       218 ----~~~~~~~~~~dva~~~~~  235 (264)
T 2pd6_A          218 ----IPMGHLGDPEDVADVVAF  235 (264)
T ss_dssp             ----CTTCSCBCHHHHHHHHHH
T ss_pred             ----CCCCCCCCHHHHHHHHHH
Confidence                112347899999998864

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.88  E-value=2.3e-22  Score=180.63  Aligned_cols=164  Identities=12%  Similarity=0.058  Sum_probs=126.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC---CCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG---NPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+...+ ....+.   ..++.++.+|+.++.            
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHE-AARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999996432221 111110   246788889987752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|+||||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+...           
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------  151 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------  151 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------
Confidence            237999999999754322    223577899999999999988874    3444 89999998766321           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                           .....|+.+|++.+.+++.++.+   +|+++++++||.|+++.
T Consensus       152 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  194 (263)
T 3ai3_A          152 -----WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD  194 (263)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence                 22367999999999999999876   59999999999999974

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.88  E-value=1.4e-22  Score=184.07  Aligned_cols=176  Identities=15%  Similarity=0.202  Sum_probs=128.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~  190 (340)
                      |+||||||||+||++++++|+++ |++|++++|+......     +...+++++.+|+.++     .+.++|+|||+|+.
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            57999999999999999999998 9999999997543221     1235788999998774     56789999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      ...          ...|+.++.+++++|++.++ +|||+||.+.   ...           .+    ..+...+..+|..
T Consensus        76 ~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~~~-----------~~----~~~~~~~~~~e~~  127 (289)
T 3e48_A           76 IHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---QHN-----------NP----FHMSPYFGYASRL  127 (289)
T ss_dssp             CCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---STT-----------CC----STTHHHHHHHHHH
T ss_pred             Ccc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC---CCC-----------CC----CccchhHHHHHHH
Confidence            321          13589999999999999997 8999999432   111           11    1122223334443


Q ss_pred             HHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +    ++.+++++++||+.+||+.         ..++..+.++.. ..++.++..++|++++|+|++++.
T Consensus       128 ~----~~~g~~~~ilrp~~~~~~~---------~~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~  183 (289)
T 3e48_A          128 L----STSGIDYTYVRMAMYMDPL---------KPYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIA  183 (289)
T ss_dssp             H----HHHCCEEEEEEECEESTTH---------HHHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHH
T ss_pred             H----HHcCCCEEEEecccccccc---------HHHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHH
Confidence            3    4569999999999999973         223344444332 345677889999999999999875

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.88  E-value=3.2e-23  Score=189.32  Aligned_cols=187  Identities=18%  Similarity=0.159  Sum_probs=136.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag  189 (340)
                      +|+|+||||||+||++++++|+++| ++|++++|+.......   .+...+++++.+|+.++     .+.++|+|||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~---~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   81 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK---ELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN   81 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHH---HHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHH---HHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence            4689999999999999999999999 9999999975432111   11123578888888764     4678999999997


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAET  268 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  268 (340)
                      ....        ...+.|+.++.+++++|++.++ +||++|+.++|+....              .+...|+.+|..+|.
T Consensus        82 ~~~~--------~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~--------------~~~~~y~~sK~~~e~  139 (299)
T 2wm3_A           82 YWES--------CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG--------------RLAAAHFDGKGEVEE  139 (299)
T ss_dssp             HHHH--------TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT--------------SCCCHHHHHHHHHHH
T ss_pred             CCcc--------ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC--------------cccCchhhHHHHHHH
Confidence            4210        1235788999999999999997 8999888777753211              123679999999999


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHH-hCCCeE-EecCCceeEccccHHHHHHHHHh
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL-RKEPLT-VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++.    .|++++++||+.+||+...        .++.... .++... .++.++..++|++++|+++++..
T Consensus       140 ~~~~----~gi~~~ilrp~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~  200 (299)
T 2wm3_A          140 YFRD----IGVPMTSVRLPCYFENLLS--------HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLS  200 (299)
T ss_dssp             HHHH----HTCCEEEEECCEEGGGGGT--------TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHH
T ss_pred             HHHH----CCCCEEEEeecHHhhhchh--------hcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHH
Confidence            8854    5899999999999997421        1111111 222222 23446788999999999999864

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.88  E-value=2.5e-23  Score=179.72  Aligned_cols=178  Identities=15%  Similarity=0.161  Sum_probs=135.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC---CCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL---EVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~---~~D~Vih~A  188 (340)
                      |+++||||+|+||++++++|+++  +|++++|+...... ....+..   .++.+|+.++     .+.   ++|+|||||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~-~~~~~~~---~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAE-LAREVGA---RALPADLADELEAKALLEEAGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHH-HHHHHTC---EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHH-HHHhccC---cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence            58999999999999999999999  99999986432211 1111111   6777888664     233   799999999


Q ss_pred             cCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 019470          189 CPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       189 g~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      |......    ..++++..+++|+.++.++++++++.+. +||++||...|..                ..+...|+.+|
T Consensus        75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~----------------~~~~~~Y~~sK  138 (207)
T 2yut_A           75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ----------------VPGFAAYAAAK  138 (207)
T ss_dssp             CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS----------------STTBHHHHHHH
T ss_pred             CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC----------------CCCcchHHHHH
Confidence            9754322    2345788999999999999999966654 8999999887632                12346899999


Q ss_pred             HHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          264 RTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++.|.+++.++.+   .|++++++|||.++++...                       +++.....+++++|+|++++.
T Consensus       139 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------------------~~~~~~~~~~~~~dva~~~~~  194 (207)
T 2yut_A          139 GALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-----------------------PLGGPPKGALSPEEAARKVLE  194 (207)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------------------GGTSCCTTCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------------------ccCCCCCCCCCHHHHHHHHHH
Confidence            9999999998876   5999999999999987410                       112334679999999999874

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.88  E-value=2.3e-22  Score=179.27  Aligned_cols=201  Identities=15%  Similarity=0.052  Sum_probs=140.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCce-EEeeCcccccc-----------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNF-ELIRHDVVEPL-----------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~-----------~~  179 (340)
                      +++++++++||||+|+||++++++|+++|++|++++|+.+...+ ....+ ..++ .++.+|+.+..           +.
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDR-AAQEL-GAAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-cccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            35678899999999999999999999999999999996432221 11111 1244 77888887642           24


Q ss_pred             CCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||.......    .++++..+++|+.++.++++++    ++.+. +||++||...+...             
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  151 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-------------  151 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-------------
Confidence            79999999997543322    2346788999999988877765    34454 89999998765321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                       +..+...|+.+|++.|.+++.++.+.   |++++++|||.++++.......  ...+...+.+..+         ...+
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~  219 (254)
T 2wsb_A          152 -RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE--RPELFETWLDMTP---------MGRC  219 (254)
T ss_dssp             -SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT--CHHHHHHHHHTST---------TSSC
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc--ChHHHHHHHhcCC---------CCCC
Confidence             11223689999999999999988764   8999999999999874210000  0123333333322         2348


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ++++|+|++++.
T Consensus       220 ~~~~dva~~~~~  231 (254)
T 2wsb_A          220 GEPSEIAAAALF  231 (254)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            899999998864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=2.5e-22  Score=179.72  Aligned_cols=198  Identities=17%  Similarity=0.154  Sum_probs=138.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.  +.....+.  . .++.+|+.++.            +.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGR   77 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999997654  22222222  3 67788887642            236


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||.......    .++++..+++|+.++.++++++..    .+. +||++||...+..               
T Consensus        78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------  142 (256)
T 2d1y_A           78 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA---------------  142 (256)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC---------------
Confidence            9999999997643321    234678999999999999988754    344 8999999765421               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHH-hCCCeEEecCCceeEcc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL-RKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~  327 (340)
                       ......|+.+|++.+.+++.++.+.   |+++++++||.+.++..        ..++.... ..+....+.+......+
T Consensus       143 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (256)
T 2d1y_A          143 -EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--------LEAIALSPDPERTRRDWEDLHALRRL  213 (256)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--------HHHHC--------CHHHHTTSTTSSC
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh--------hhccccccCCHHHHHHHHhcCCCCCC
Confidence             1123689999999999999988763   89999999999976521        11100000 01111111222234568


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ++++|+|++++.
T Consensus       214 ~~~~dvA~~~~~  225 (256)
T 2d1y_A          214 GKPEEVAEAVLF  225 (256)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            999999998864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.88  E-value=6e-23  Score=184.15  Aligned_cols=203  Identities=12%  Similarity=0.034  Sum_probs=141.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            +
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3567889999999999999999999999999999999653322111110 01346788889987742            2


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       .++|+||||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+..            
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  152 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA------------  152 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC------------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC------------
Confidence             57999999999754322    223577899999999999999883    4454 8999999765421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                          ......|+.+|++.|.+++.++.+.   |+++++++||.+.++..... ...-....+..+.+..         ..
T Consensus       153 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~  219 (260)
T 2ae2_A          153 ----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------AL  219 (260)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TT
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CC
Confidence                1223689999999999999998764   89999999999987631000 0000001111222221         22


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+++++|+|++++.
T Consensus       220 ~~~~~~~dvA~~v~~  234 (260)
T 2ae2_A          220 RRMGEPKELAAMVAF  234 (260)
T ss_dssp             CSCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            358899999998764

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.88  E-value=6.1e-22  Score=176.08  Aligned_cols=197  Identities=18%  Similarity=0.092  Sum_probs=139.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +|+++||||+|+||++++++|+++|++|++++|+.+...+.....  ....++.++.+|+.++.            +.++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999643322111110  01246788899987742            1379


Q ss_pred             CEEEEcccCCCCCC-------CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-------~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      |+||||||......       ..++++..+++|+.++.++++++.    +.+. +||++||...+..             
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------------  148 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-------------  148 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------------
Confidence            99999999754322       123477899999999988777664    3454 8999999776532             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|++.|.+++.++.+.   |++++++|||.++++.....  .....+...+.+..+         ...
T Consensus       149 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~---------~~~  214 (250)
T 2cfc_A          149 ---FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR--LDQPELRDQVLARIP---------QKE  214 (250)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH--HTSHHHHHHHHTTCT---------TCS
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc--cCCHHHHHHHHhcCC---------CCC
Confidence               1223689999999999999998765   99999999999999863210  000123333333322         234


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +.+++|++++++.
T Consensus       215 ~~~~~dva~~~~~  227 (250)
T 2cfc_A          215 IGTAAQVADAVMF  227 (250)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            7899999998764

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.88  E-value=1.8e-22  Score=184.24  Aligned_cols=200  Identities=15%  Similarity=0.111  Sum_probs=144.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.....+.....  ....++.++.+|+.++.            
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999999754322222111  12357888999997742            


Q ss_pred             cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +.++|++|||||......     ..++++..+++|+.|+.++++++...   +.+||++||...+...            
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------  190 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN------------  190 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC------------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC------------
Confidence            236999999999754322     23457889999999999999999765   2389999998765321            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                          .....|+.+|++.+.+++.++.+.   |+++++++||.|+++....   .........+         ........
T Consensus       191 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~---------~~~~p~~r  254 (291)
T 3ijr_A          191 ----ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFDEKKVSQF---------GSNVPMQR  254 (291)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---HSCHHHHHHT---------TTTSTTSS
T ss_pred             ----CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---cCCHHHHHHH---------HccCCCCC
Confidence                123679999999999999998764   8999999999999874210   0001111111         12223345


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +.+++|+|++++.
T Consensus       255 ~~~p~dvA~~v~~  267 (291)
T 3ijr_A          255 PGQPYELAPAYVY  267 (291)
T ss_dssp             CBCGGGTHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            7788999988764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.88  E-value=2.8e-22  Score=181.20  Aligned_cols=201  Identities=15%  Similarity=0.060  Sum_probs=143.1

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc-ccCCCceEEeeCcccccc-----------c
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HFGNPNFELIRHDVVEPL-----------L  178 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~-----------~  178 (340)
                      .+++++|++|||||+|+||.+++++|+++|++|++++|... ..+...+ .....++.++.+|+.+..           .
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAAT  104 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhc
Confidence            34678899999999999999999999999999999997532 1111111 112356888899997742           1


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+..             
T Consensus       105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-------------  171 (273)
T 3uf0_A          105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-------------  171 (273)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred             CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-------------
Confidence            37999999999765433    23357789999999999999987    33444 8999999775521             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|++.+.+++.++.+   .|+++++++||.|.++.....  .........+.+..+         ...
T Consensus       172 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~p---------~~r  237 (273)
T 3uf0_A          172 ---GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL--RADDERAAEITARIP---------AGR  237 (273)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--HTSHHHHHHHHHHST---------TSS
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc--ccCHHHHHHHHhcCC---------CCC
Confidence               122368999999999999999877   589999999999998742100  000122233333222         224


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +..++|+|++++.
T Consensus       238 ~~~pedva~~v~~  250 (273)
T 3uf0_A          238 WATPEDMVGPAVF  250 (273)
T ss_dssp             CBCGGGGHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            6788899988764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.88  E-value=5.3e-22  Score=181.23  Aligned_cols=200  Identities=18%  Similarity=0.140  Sum_probs=144.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      .++++|++|||||+|+||.+++++|+++|++|++++|+.+...+.....  ....++.++.+|+.++.            
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999765433222111  12246888999998752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|+||||||......    ..++++..+++|+.|+.++++++    ++.+ .+||++||...+..            
T Consensus       117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~------------  184 (293)
T 3rih_A          117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT------------  184 (293)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC------------
Confidence            237899999999764332    23457789999999999999987    3444 49999999763210            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         +......|+.+|++.+.+++.++.+   .|+++++++||.|+++...    .....+...+.+..++         .
T Consensus       185 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~p~---------~  248 (293)
T 3rih_A          185 ---GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV----DMGEEYISGMARSIPM---------G  248 (293)
T ss_dssp             ---BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH----HTCHHHHHHHHTTSTT---------S
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh----hccHHHHHHHHhcCCC---------C
Confidence               0112368999999999999999876   4899999999999987421    1113344444444332         2


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+..++|++++++.
T Consensus       249 r~~~p~dvA~~v~f  262 (293)
T 3rih_A          249 MLGSPVDIGHLAAF  262 (293)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
Confidence            25678999988764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.88  E-value=3.2e-23  Score=178.55  Aligned_cols=168  Identities=15%  Similarity=0.111  Sum_probs=128.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----cc---CCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL---LEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~---~~~D~Vih~A  188 (340)
                      |+++||||+|+||++++++|+ +|++|++++|+..                .+.+|+.++     .+   .++|+|||||
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~a   66 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVSAT   66 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEECC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEECC
Confidence            489999999999999999999 9999999998643                244555443     22   2589999999


Q ss_pred             cCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          189 CPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       189 g~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      |.......    .+++...+++|+.++.++++++.+.   +.+||++||...+..                ..+...|+.
T Consensus        67 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~~~~Y~~  130 (202)
T 3d7l_A           67 GSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP----------------IVQGASAAM  130 (202)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC----------------CTTCHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC----------------CCccHHHHH
Confidence            96543322    2345678899999999999999876   458999999765421                123368999


Q ss_pred             HHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          262 GKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|.+.|.+++.++.+.  |++++++|||.++++..         .+             ++....+++++++|+|++++.
T Consensus       131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~---------~~-------------~~~~~~~~~~~~~dva~~~~~  188 (202)
T 3d7l_A          131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD---------KL-------------EPFFEGFLPVPAAKVARAFEK  188 (202)
T ss_dssp             HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH---------HH-------------GGGSTTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh---------hh-------------hhhccccCCCCHHHHHHHHHH
Confidence            9999999999988663  99999999999998731         10             111234578999999998764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.88  E-value=9e-22  Score=176.72  Aligned_cols=163  Identities=15%  Similarity=0.057  Sum_probs=124.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c-------CC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L-------LE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~-------~~  180 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+...+ ....+. .++.++.+|+.++.     +       .+
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQA-VVAGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4677899999999999999999999999999999996433221 111121 25678888987642     2       27


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++..    .+  .+||++||...+..              
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  152 (263)
T 3ak4_A           87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG--------------  152 (263)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC--------------
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC--------------
Confidence            999999999754322    2235778999999999999888754    33  48999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                        ......|+.+|++.+.+++.++.+.   |+++++++||.++++.
T Consensus       153 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  196 (263)
T 3ak4_A          153 --APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM  196 (263)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence              1123689999999999999988764   9999999999998864

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.88  E-value=8.2e-22  Score=177.22  Aligned_cols=201  Identities=14%  Similarity=0.049  Sum_probs=141.1

Q ss_pred             CCCCCCCeEEEEcCch-HHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccccc----------
Q 019470          111 GLKRKGLRIVVTGGAG-FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL----------  177 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG-~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~----------  177 (340)
                      ...+++|++|||||+| +||.+++++|+++|++|++++|+.+...+...+  .....++.++.+|+.+..          
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            3457889999999997 699999999999999999999975433222111  112357899999997752          


Q ss_pred             --cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeCcccccCCCCCCCCCC
Q 019470          178 --LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 --~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~-----~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                        +.++|+||||||......    ..++++..+++|+.++.++++++...     +. +||++||...+.          
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------  166 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR----------  166 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC----------
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC----------
Confidence              236899999999765433    22357789999999999999988653     33 899999976542          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                            +......|+.+|++.+.+++.++.+   .|+++++++||.|.++....   .....+..         .+....
T Consensus       167 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~---------~~~~~~  228 (266)
T 3o38_A          167 ------AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK---TSSSELLD---------RLASDE  228 (266)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------------CC
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhc---cCcHHHHH---------HHHhcC
Confidence                  1223478999999999999998876   58999999999998864211   00011111         112223


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ....+.+++|+|++++.
T Consensus       229 ~~~r~~~~~dva~~i~~  245 (266)
T 3o38_A          229 AFGRAAEPWEVAATIAF  245 (266)
T ss_dssp             TTSSCCCHHHHHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHH
Confidence            34468899999998864

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.88  E-value=3.3e-22  Score=179.67  Aligned_cols=199  Identities=18%  Similarity=0.122  Sum_probs=144.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...+  .....++.++.+|+.++.            +
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999975433221111  112247888999997742            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|++|||||......    ..++++..+++|+.++.++++++...    + .+||++||.....              
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--------------  152 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI--------------  152 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT--------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc--------------
Confidence            37999999999764332    22357788999999999999887654    4 4999999965321              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                       .+......|+.+|++.+.+++.++.+   +|+++++++||.|+++.....    ...+...+.+..+.         ..
T Consensus       153 -~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~---------~r  218 (262)
T 3pk0_A          153 -TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN----GEEYIASMARSIPA---------GA  218 (262)
T ss_dssp             -BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT----CHHHHHHHHTTSTT---------SS
T ss_pred             -CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc----CHHHHHHHHhcCCC---------CC
Confidence             01122368999999999999999887   599999999999998742111    12333444443322         23


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +..++|++++++.
T Consensus       219 ~~~p~dva~~v~~  231 (262)
T 3pk0_A          219 LGTPEDIGHLAAF  231 (262)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            7788999998764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.88  E-value=1.7e-22  Score=180.84  Aligned_cols=200  Identities=15%  Similarity=0.100  Sum_probs=144.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578899999999999999999999999999999999654322211111 12356888899997752            2


Q ss_pred             CCCCEEEEcccCCCCCC---CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~---~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|++|||||......   ..++++..+++|+.|+.++++++.    +.+. +||++||...+.               
T Consensus        88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  152 (256)
T 3gaf_A           88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN---------------  152 (256)
T ss_dssp             SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC---------------
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC---------------
Confidence            37999999999765432   234577899999999999999873    3444 899999977552               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.|.++....   .........+.+..         ....+
T Consensus       153 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~---------p~~r~  219 (256)
T 3gaf_A          153 -TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT---VLTPEIERAMLKHT---------PLGRL  219 (256)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH---HCCHHHHHHHHTTC---------TTSSC
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh---ccCHHHHHHHHhcC---------CCCCC
Confidence             12223689999999999999998764   8999999999998763100   00022223333322         22357


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|++++++.
T Consensus       220 ~~~~dva~~~~~  231 (256)
T 3gaf_A          220 GEAQDIANAALF  231 (256)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            899999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.88  E-value=6.4e-22  Score=177.34  Aligned_cols=202  Identities=15%  Similarity=0.092  Sum_probs=134.6

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------c
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++++|+++||||+|+||.+++++|+++|++|++++|+.+...+... .+ ...+.++.+|+.+..            +
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG-EI-GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            356788999999999999999999999999999999997543322211 11 246788899987742            2


Q ss_pred             CCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---------CCeEEEEeCcccccCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---------GARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---------~~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                      .++|+||||||......     ..++++..+++|+.++.++++++...         +.+||++||...+.         
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------  152 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR---------  152 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS---------
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC---------
Confidence            37899999999754221     22357789999999999998877432         12699999976542         


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                             +......|+.+|++.+.+++.++.+   .++++++++||.+.++............+.         ..+.+.
T Consensus       153 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~  216 (261)
T 3n74_A          153 -------PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIR---------KKFRDS  216 (261)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHH---------HHHhhc
Confidence                   1122367999999999999999876   489999999999988753110000001111         111222


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                      .....+++++|+|++++.
T Consensus       217 ~~~~~~~~~~dva~~~~~  234 (261)
T 3n74_A          217 IPMGRLLKPDDLAEAAAF  234 (261)
T ss_dssp             CTTSSCCCHHHHHHHHHH
T ss_pred             CCcCCCcCHHHHHHHHHH
Confidence            233468999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.88  E-value=3e-21  Score=172.13  Aligned_cols=156  Identities=19%  Similarity=0.165  Sum_probs=120.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+..      .   ..+..+.+|+.++.            +.+
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~------~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------Q---YPFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS------C---CSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh------c---CCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46778999999999999999999999999999999965421      1   12677788887642            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++    ++.+ .+||++||...+.                
T Consensus        75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------  138 (250)
T 2fwm_X           75 LDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT----------------  138 (250)
T ss_dssp             CCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----------------
Confidence            999999999754322    23457889999999999999988    3444 4999999977652                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|++.+.+++.++.+   .|+++++++||.++++.
T Consensus       139 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  183 (250)
T 2fwm_X          139 PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM  183 (250)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence            1123368999999999999999876   48999999999999875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.88  E-value=1.4e-21  Score=175.99  Aligned_cols=195  Identities=13%  Similarity=0.066  Sum_probs=138.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...     ......+.++.+|+.+..            +.+
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-----ALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH-----TTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-----HhhcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            456789999999999999999999999999999998643221     122346788889987742            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.|+.++++++.    +.+ .+||++||...+..               
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~---------------  152 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT---------------  152 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC---------------
Confidence            999999999764332    223577889999999999777763    444 49999999775521               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+   .|+++++++||.|.++...................           ....++
T Consensus       153 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----------~~~r~~  220 (266)
T 3p19_A          153 -FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV-----------DMGGVL  220 (266)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH-----------HTTCCB
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc-----------cccCCC
Confidence             122368999999999999999876   48999999999998875321111111111111000           112478


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       221 ~pedvA~av~~  231 (266)
T 3p19_A          221 AADDVARAVLF  231 (266)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.88  E-value=3.1e-22  Score=181.56  Aligned_cols=201  Identities=18%  Similarity=0.103  Sum_probs=141.8

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--c--CCCceEEeeCcccccc----------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--F--GNPNFELIRHDVVEPL----------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~--~~~~~~~~~~D~~~~~----------  177 (340)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+...+.  .  ....+.++.+|+.++.          
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (281)
T 3svt_A            7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT   86 (281)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            3567889999999999999999999999999999999754322211111  1  1126888899997752          


Q ss_pred             --cCCCCEEEEcccCCCCC-C----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCC
Q 019470          178 --LLEVDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 --~~~~D~Vih~Ag~~~~~-~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                        +.++|++|||||..... .    ..++++..+++|+.|+.++++++...    +. +||++||...+..         
T Consensus        87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------  157 (281)
T 3svt_A           87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT---------  157 (281)
T ss_dssp             HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC---------
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC---------
Confidence              23689999999963221 1    22357789999999999999987543    33 8999999776522         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                             ......|+.+|++.+.+++.++.+.   |+++++++||.|+++.....  .....+...+....+        
T Consensus       158 -------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~p--------  220 (281)
T 3svt_A          158 -------HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI--TESAELSSDYAMCTP--------  220 (281)
T ss_dssp             -------CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--HTCHHHHHHHHHHCS--------
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--ccCHHHHHHHHhcCC--------
Confidence                   1223689999999999999998764   69999999999998742100  000122223333222        


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                       ...+.+++|++++++.
T Consensus       221 -~~r~~~~~dva~~~~~  236 (281)
T 3svt_A          221 -LPRQGEVEDVANMAMF  236 (281)
T ss_dssp             -SSSCBCHHHHHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHH
Confidence             2346789999998764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.88  E-value=5.1e-22  Score=177.81  Aligned_cols=198  Identities=16%  Similarity=0.082  Sum_probs=139.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|+|+||||+|+||++++++|+++|++|++++|......+.....+  ...++.++.+|+.++.            +
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999983222111111111  1246788889987642            1


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++..    .+  .+||++||...+.             
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-------------  150 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-------------  150 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-------------
Confidence            27999999999754322    2235678999999999998887654    33  4999999976542             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHH--HHHHHHHHhCCCeEEecCCce
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~  323 (340)
                         +..+...|+.+|++.+.+++.++.+.   |++++++|||.++++...    ...  ..+...+.+..+         
T Consensus       151 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~---------  214 (261)
T 1gee_A          151 ---PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----EKFADPEQRADVESMIP---------  214 (261)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH----HHHHSHHHHHHHHTTCT---------
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh----hcccChhHHHHHHhcCC---------
Confidence               12234689999999999999888764   899999999999997521    110  122222222211         


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+++++|+|++++.
T Consensus       215 ~~~~~~~~dva~~~~~  230 (261)
T 1gee_A          215 MGYIGEPEEIAAVAAW  230 (261)
T ss_dssp             TSSCBCHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHH
Confidence            2348899999998864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.88  E-value=9.8e-22  Score=178.19  Aligned_cols=203  Identities=17%  Similarity=0.094  Sum_probs=142.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC---------ccc---ccccc--cCCCceEEeeCcccccc-
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---------RKE---NVMHH--FGNPNFELIRHDVVEPL-  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~---------~~~---~~~~~--~~~~~~~~~~~D~~~~~-  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|..+.         ..+   .....  ....++..+.+|+.++. 
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            4678899999999999999999999999999999985221         111   11111  12346788889997752 


Q ss_pred             -----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccC
Q 019470          178 -----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGD  236 (340)
Q Consensus       178 -----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~  236 (340)
                                 +.++|++|||||......    ..+++++.+++|+.++.++++++.    +.+  .+||++||...+..
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA  171 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence                       237999999999765433    233577899999999999998873    333  38999999765421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhC-
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK-  312 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~-  312 (340)
                                      ......|+.+|++.+.+++.++.+   +|+++++++||.|+++...   ..   .+....... 
T Consensus       172 ----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---~~---~~~~~~~~~~  229 (280)
T 3pgx_A          172 ----------------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE---PE---AMMEIFARHP  229 (280)
T ss_dssp             ----------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC---HH---HHHHHHHHCG
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc---hh---hhhhhhhcCc
Confidence                            122368999999999999999876   5899999999999998632   11   111111111 


Q ss_pred             ---CCeEEecCCceeEccccHHHHHHHHHh
Q 019470          313 ---EPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       313 ---~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                         ..... ...... .+++++|+|++++.
T Consensus       230 ~~~~~~~~-~~~~~~-r~~~p~dvA~~v~~  257 (280)
T 3pgx_A          230 SFVHSFPP-MPVQPN-GFMTADEVADVVAW  257 (280)
T ss_dssp             GGGGGSCC-BTTBCS-SCBCHHHHHHHHHH
T ss_pred             hhhhhhhh-cccCCC-CCCCHHHHHHHHHH
Confidence               11111 121223 48999999999864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.88  E-value=4.6e-22  Score=178.57  Aligned_cols=200  Identities=16%  Similarity=0.139  Sum_probs=140.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ...+|+++||||+|+||.+++++|+++|++|++++|+.....+...+..  ...++.++.+|+.++.            +
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999886544333222221  1246889999997742            2


Q ss_pred             CCCCEEEEcccCC--CCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPA--SPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~--~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|+||||||..  ....    ..++++..+++|+.++.++++++    ++.+. +||++||.+.++..          
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~----------  153 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP----------  153 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC----------
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC----------
Confidence            3799999999942  1111    22356789999999999999988    55554 89999997554221          


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                          +..+...|+.+|++.+.+++.++.+   .|+++++++||.|+++...    ............         ....
T Consensus       154 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----~~~~~~~~~~~~---------~~p~  216 (264)
T 3i4f_A          154 ----GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE----ATIQEARQLKEH---------NTPI  216 (264)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS----CCHHHHHHC----------------
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch----hccHHHHHHHhh---------cCCC
Confidence                1223368999999999999999876   5899999999999997531    122222221111         1223


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+.+++|+|++++.
T Consensus       217 ~r~~~~~dva~~v~~  231 (264)
T 3i4f_A          217 GRSGTGEDIARTISF  231 (264)
T ss_dssp             -CCCCHHHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHH
Confidence            457899999998864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.87  E-value=1.1e-21  Score=178.01  Aligned_cols=166  Identities=18%  Similarity=0.105  Sum_probs=127.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc--------ccccc---cc--cCCCceEEeeCcccccc--
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--------KENVM---HH--FGNPNFELIRHDVVEPL--  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~--------~~~~~---~~--~~~~~~~~~~~D~~~~~--  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+....        .+.+.   ..  ....++.++.+|+.++.  
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            46788999999999999999999999999999999964321        11110   00  12356888899997752  


Q ss_pred             ----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCC
Q 019470          178 ----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPL  238 (340)
Q Consensus       178 ----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~  238 (340)
                                +.++|++|||||......    ..++++..+++|+.|+.++++++.    +.+. +||++||...+..  
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  164 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA--  164 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC--
Confidence                      237999999999765332    234578899999999999999863    3443 8999999775521  


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCC
Q 019470          239 QHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~  294 (340)
                                    ......|+.+|++.+.+++.++.+   +|+++++++||.|+++..
T Consensus       165 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~  209 (281)
T 3s55_A          165 --------------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT  209 (281)
T ss_dssp             --------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred             --------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence                          123368999999999999999886   489999999999999864

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.87  E-value=4.1e-22  Score=179.53  Aligned_cols=203  Identities=16%  Similarity=0.094  Sum_probs=142.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc-----c------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----L------  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~------  178 (340)
                      +++++|+|+||||+|+||++++++|+++|++|++++|......+.....+  ...++.++.+|+.++.     +      
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35678899999999999999999999999999999984322211111111  1346788889987642     1      


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccc-cCCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVY-GDPLQHPQKETYWGN  249 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~-g~~~~~~~~E~~~~~  249 (340)
                       .++|+||||||......    ..++++..+++|+.++.++++++...   +.+||++||...+ ...            
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  164 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI------------  164 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC------------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC------------
Confidence             27999999999754322    22346789999999999999998765   4589999998765 221            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCc--------cHH-HHHHHHHHhCCCeEE
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDG--------RVV-SNFVAQALRKEPLTV  317 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~--------~~~-~~~~~~~~~~~~~~~  317 (340)
                          .....|+.+|++.|.+++.++.+.   ++++++++||.++++.......        ... ..+...+..+     
T Consensus       165 ----~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  235 (274)
T 1ja9_A          165 ----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM-----  235 (274)
T ss_dssp             ----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT-----
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc-----
Confidence                122679999999999999988764   8999999999998863210000        000 1122222222     


Q ss_pred             ecCCceeEccccHHHHHHHHHh
Q 019470          318 YGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       318 ~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                          .....+++++|++++++.
T Consensus       236 ----~~~~~~~~~~dva~~i~~  253 (274)
T 1ja9_A          236 ----NPLKRIGYPADIGRAVSA  253 (274)
T ss_dssp             ----STTSSCBCHHHHHHHHHH
T ss_pred             ----CCCCCccCHHHHHHHHHH
Confidence                233468999999999864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.87  E-value=1.2e-21  Score=179.12  Aligned_cols=201  Identities=14%  Similarity=0.059  Sum_probs=140.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      ..+++|+++||||+|+||.+++++|+++|++|++++|+.....+.....  ....++.++.+|+.+..            
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            3577899999999999999999999999999999999653322111110  00346888999987642            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH-----cC-CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR-----VG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~-----~~-~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|+||||||......    ..++++..+++|+.++.++++++..     .+ .+||++||...+..           
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  170 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------  170 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-----------
Confidence            235799999999654321    2335778999999999999888753     23 38999999765532           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCCCeEEecCCce
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                           ..+...|+.+|++.|.+++.++.+   .|++++++|||.+++++.... ....  .....+.+..+         
T Consensus       171 -----~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~p---------  234 (302)
T 1w6u_A          171 -----SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG--TFEKEMIGRIP---------  234 (302)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS--HHHHHHHTTCT---------
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccch--hhHHHHHhcCC---------
Confidence                 122368999999999999999877   699999999999998743211 0110  11122333222         


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+++++|+|++++.
T Consensus       235 ~~~~~~~~dva~~~~~  250 (302)
T 1w6u_A          235 CGRLGTVEELANLAAF  250 (302)
T ss_dssp             TSSCBCHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHH
Confidence            1247899999998864

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.87  E-value=1.5e-21  Score=173.64  Aligned_cols=196  Identities=14%  Similarity=0.038  Sum_probs=134.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~V  184 (340)
                      ..++++||||||+|+||++++++|+++|++|++++|+.+...+. ...+ ...+.+..+|+.+..        ..++|+|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~l   88 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL-GNAL-KDNYTIEVCNLANKEECSNLISKTSNLDIL   88 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHH-CSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHh-ccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            56788999999999999999999999999999999964432221 1111 236778888887642        2369999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      |||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+..                ...
T Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~  152 (249)
T 3f9i_A           89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG----------------NPG  152 (249)
T ss_dssp             EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C----------------CSC
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC----------------CCC
Confidence            99999764322    3456889999999999999887743    343 8999999775522                122


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHH
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD  332 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D  332 (340)
                      ...|+.+|++.+.+++.++.+   .|+++++++||.|.++....    ........+..+.         ....+.+++|
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~---------~~~~~~~~~d  219 (249)
T 3f9i_A          153 QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK----LNEKQREAIVQKI---------PLGTYGIPED  219 (249)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC----------CCHHHHHHHHHHC---------TTCSCBCHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc----cCHHHHHHHHhcC---------CCCCCcCHHH
Confidence            368999999999999998876   48999999999998875321    1122222222222         2345888999


Q ss_pred             HHHHHHh
Q 019470          333 LVRLTET  339 (340)
Q Consensus       333 va~a~~~  339 (340)
                      ++++++.
T Consensus       220 va~~~~~  226 (249)
T 3f9i_A          220 VAYAVAF  226 (249)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.87  E-value=3.8e-22  Score=178.02  Aligned_cols=197  Identities=11%  Similarity=0.021  Sum_probs=141.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC-CCCccccccccc--CCCceEEeeCcccccc-----c-------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF-FTGRKENVMHHF--GNPNFELIRHDVVEPL-----L-------  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~-~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~-------  178 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|+ ..... .....+  ...++.++.+|+.++.     +       
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID-ETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH-HHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH-HHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            567899999999999999999999999999999997 33222 111111  1346888999987742     2       


Q ss_pred             CCCCEEEEcccC-CCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC------CeEEEEeCcccccCCCCCCCC
Q 019470          179 LEVDQIYHLACP-ASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG------ARFLLTSTSEVYGDPLQHPQK  243 (340)
Q Consensus       179 ~~~D~Vih~Ag~-~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~------~~~i~~SS~~v~g~~~~~~~~  243 (340)
                      .++|+||||||. .....    ..+.++..+++|+.++.++++++..    .+      .+||++||...+..       
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  156 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-------  156 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-------
Confidence            279999999996 32211    1234677899999999999887632    22      48999999765531       


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecC
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                              +..+...|+.+|++.|.+++.++.+.   |++++++|||.++++....    ....+...+.++.+      
T Consensus       157 --------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~------  218 (258)
T 3afn_B          157 --------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD----KTQDVRDRISNGIP------  218 (258)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT----CCHHHHHHHHTTCT------
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc----cCHHHHHHHhccCC------
Confidence                    11223689999999999999988764   8999999999999985321    11233344444322      


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                         ...+++++|+|++++.
T Consensus       219 ---~~~~~~~~dva~~~~~  234 (258)
T 3afn_B          219 ---MGRFGTAEEMAPAFLF  234 (258)
T ss_dssp             ---TCSCBCGGGTHHHHHH
T ss_pred             ---CCcCCCHHHHHHHHHH
Confidence               2358899999998764

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.87  E-value=1.6e-21  Score=176.27  Aligned_cols=196  Identities=16%  Similarity=0.079  Sum_probs=139.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeC-CCCCccccccccc---CCCceEEeeCccccc----c-------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN-FFTGRKENVMHHF---GNPNFELIRHDVVEP----L-------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r-~~~~~~~~~~~~~---~~~~~~~~~~D~~~~----~-------  177 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++| +.+... .....+   ...++.++.+|+.+.    .       
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQ-RLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHH-HHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            356789999999999999999999999999999998 432221 111111   024678888888775    2       


Q ss_pred             -----cCCCCEEEEcccCCCCCC----Cc-----------CChhhHHHHHHHHHHHHHHHHHHc---C-------CeEEE
Q 019470          178 -----LLEVDQIYHLACPASPVH----YK-----------FNPVKTIKTNVVGTLNMLGLAKRV---G-------ARFLL  227 (340)
Q Consensus       178 -----~~~~D~Vih~Ag~~~~~~----~~-----------~~~~~~~~~Nv~g~~~ll~~a~~~---~-------~~~i~  227 (340)
                           +.++|+||||||......    ..           ++++..+++|+.++.++++++...   +       .+||+
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~  166 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  166 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEE
Confidence                 126999999999754322    12           456789999999999999998763   2       48999


Q ss_pred             EeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHH
Q 019470          228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSN  304 (340)
Q Consensus       228 ~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~  304 (340)
                      +||...+..                ......|+.+|++.+.+++.++.+.   |+++++++||.|+++ .. ..    ..
T Consensus       167 isS~~~~~~----------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~-~~----~~  224 (276)
T 1mxh_A          167 LCDAMTDLP----------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA-MP----QE  224 (276)
T ss_dssp             ECCGGGGSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS-SC----HH
T ss_pred             ECchhhcCC----------------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc-CC----HH
Confidence            999776521                1223689999999999999988764   899999999999998 21 11    22


Q ss_pred             HHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          305 FVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       305 ~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +...+.+..+.        .+++.+++|+|++++.
T Consensus       225 ~~~~~~~~~p~--------~r~~~~~~dva~~v~~  251 (276)
T 1mxh_A          225 TQEEYRRKVPL--------GQSEASAAQIADAIAF  251 (276)
T ss_dssp             HHHHHHTTCTT--------TSCCBCHHHHHHHHHH
T ss_pred             HHHHHHhcCCC--------CCCCCCHHHHHHHHHH
Confidence            33333332221        1237899999998864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.87  E-value=1.8e-21  Score=174.67  Aligned_cols=193  Identities=15%  Similarity=0.025  Sum_probs=134.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+...+.+..    ..+.++.+|+.++.            +.
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ----AGAVALYGDFSCETGIMAFIDLLKTQTS   98 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH----HTCEEEECCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh----cCCeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            567789999999999999999999999999999999976543222221    23678889987742            23


Q ss_pred             CCCEEEEcccCCCCCCCc---CChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~---~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+||||||.......+   ++++..+++|+.|+.++++++..    .+ .+||++||...+..               
T Consensus        99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~---------------  163 (260)
T 3gem_A           99 SLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG---------------  163 (260)
T ss_dssp             CCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC---------------
T ss_pred             CCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC---------------
Confidence            699999999975433322   34668999999999999988754    34 48999999775521               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF  329 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  329 (340)
                       ......|+.+|++.+.+++.++.+.  ++++++++||.|.++...      ...+...+....+         ..-+..
T Consensus       164 -~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~------~~~~~~~~~~~~p---------~~r~~~  227 (260)
T 3gem_A          164 -SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD------DAAYRANALAKSA---------LGIEPG  227 (260)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------------CC---------SCCCCC
T ss_pred             -CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC------CHHHHHHHHhcCC---------CCCCCC
Confidence             1223689999999999999998875  599999999999876421      0112222222222         223566


Q ss_pred             HHHHHHHHHh
Q 019470          330 VSDLVRLTET  339 (340)
Q Consensus       330 v~Dva~a~~~  339 (340)
                      ++|++++++.
T Consensus       228 ~edva~~v~~  237 (260)
T 3gem_A          228 AEVIYQSLRY  237 (260)
T ss_dssp             THHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8999998764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.87  E-value=1.4e-21  Score=174.72  Aligned_cols=162  Identities=18%  Similarity=0.174  Sum_probs=122.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+ ....+ ..++.++.+|+.++.            +.+
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAA-TAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999996432222 11111 235778888987642            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHH----HHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGL----AKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~----a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.+++++    +++.+. +||++||...+..               
T Consensus        80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  144 (254)
T 1hdc_A           80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG---------------  144 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC---------------
Confidence            999999999754322    2235778999999999865554    455554 9999999775521               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                       ......|+.+|++.+.+++.++.+   .|+++++++||.++++
T Consensus       145 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  187 (254)
T 1hdc_A          145 -LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP  187 (254)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence             122368999999999999998876   4899999999999886

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.87  E-value=6.8e-22  Score=175.49  Aligned_cols=196  Identities=14%  Similarity=0.090  Sum_probs=138.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++++++||||+|+||++++++|+++|++|++++|+.+...+ ....+   ...++.++.+|+.++.            
T Consensus         4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKA-VAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999996432221 11111   1246788888987642            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCccc-ccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEV-YGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v-~g~~~~~~~~E~~~  247 (340)
                      +.++|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||... ++.+          
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  152 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV----------  152 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC----------
Confidence            237999999999754322    22356789999999997777655    44554 8999999654 3321          


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                             ....|+.+|.+.+.+++.++.+   .++++++++||.++++....    +...+...+....+         .
T Consensus       153 -------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~  212 (248)
T 2pnf_A          153 -------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV----LSEEIKQKYKEQIP---------L  212 (248)
T ss_dssp             -------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SCHHHHHHHHHTCT---------T
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh----ccHHHHHHHHhcCC---------C
Confidence                   1267999999999999998875   38999999999999875321    11222222222221         1


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+++++|++++++.
T Consensus       213 ~~~~~~~dva~~~~~  227 (248)
T 2pnf_A          213 GRFGSPEEVANVVLF  227 (248)
T ss_dssp             SSCBCHHHHHHHHHH
T ss_pred             CCccCHHHHHHHHHH
Confidence            348899999998764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=3.7e-21  Score=174.13  Aligned_cols=199  Identities=14%  Similarity=0.110  Sum_probs=139.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+...+...+.....++.++.+|+.++.            +.
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            457788999999999999999999999999999999865332211111111126788888987742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-----CeEEEEeCcccccCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-----ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-----~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++.    +.+     .+||++||...+...         
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~---------  175 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM---------  175 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC---------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC---------
Confidence            7999999999754322    233577899999999988888764    223     489999997765321         


Q ss_pred             CCCCCCCCCCC-hHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHh--CCCeEEecC
Q 019470          247 WGNVNPIGVRS-CYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALR--KEPLTVYGD  320 (340)
Q Consensus       247 ~~~~~~~~~~~-~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  320 (340)
                             .... .|+.+|++.+.+++.++.+   .|+++++++||.+.++...    .....+...+.+  ..+      
T Consensus       176 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~p------  238 (276)
T 2b4q_A          176 -------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR----HIANDPQALEADSASIP------  238 (276)
T ss_dssp             -------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH----HHHHCHHHHHHHHHTST------
T ss_pred             -------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh----hcchhHHHHHHhhcCCC------
Confidence                   1113 7999999999999998876   4899999999999887421    111111112222  111      


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                         ...+.+++|+|++++.
T Consensus       239 ---~~r~~~p~dvA~~v~~  254 (276)
T 2b4q_A          239 ---MGRWGRPEEMAALAIS  254 (276)
T ss_dssp             ---TSSCCCHHHHHHHHHH
T ss_pred             ---CCCcCCHHHHHHHHHH
Confidence               1247899999998864

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.87  E-value=2.4e-22  Score=182.06  Aligned_cols=165  Identities=16%  Similarity=0.073  Sum_probs=125.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467789999999999999999999999999999999753322111110 01246788889987642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc------C-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~------~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++...      + .+||++||...+..            
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------  166 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG------------  166 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC------------
Confidence            6999999999754332    22346789999999999999987654      4 38999999764421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          ......|+.+|++.+.+++.++.+.   |+++++++||.+.++.
T Consensus       167 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  210 (277)
T 2rhc_B          167 ----VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM  210 (277)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence                1223689999999999999988763   8999999999998863

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.87  E-value=6.7e-22  Score=178.34  Aligned_cols=194  Identities=15%  Similarity=0.098  Sum_probs=140.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+.++|+||||||+|+||++++++|+++|++|++++|+.....         ..+..+.+|+.++.            +.
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------NVSDHFKIDVTNEEEVKEAVEKTTKKYG   80 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------TSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678899999999999999999999999999999998654321         24567778887642            23


Q ss_pred             CCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||.......    .++++..+++|+.|+.++++++..    .+. +||++||...+..              
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  146 (269)
T 3vtz_A           81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA--------------  146 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB--------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC--------------
Confidence            79999999997644332    234677899999999999988643    343 8999999876632              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCC-------CCccHHHHHHHHHHhCCCeEEecCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCI-------DDGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                        ......|+.+|++.+.+++.++.+.  ++++++++||.|.++....       ............+.+..        
T Consensus       147 --~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  216 (269)
T 3vtz_A          147 --TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH--------  216 (269)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS--------
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC--------
Confidence              1223689999999999999998876  8999999999998863100       00111122222222221        


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                       ....+.+++|+|++++.
T Consensus       217 -p~~r~~~pedvA~~v~~  233 (269)
T 3vtz_A          217 -PMGRIGRPEEVAEVVAF  233 (269)
T ss_dssp             -TTSSCBCHHHHHHHHHH
T ss_pred             -CCCCCcCHHHHHHHHHH
Confidence             23357889999998764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.87  E-value=4.3e-22  Score=178.50  Aligned_cols=206  Identities=15%  Similarity=0.063  Sum_probs=143.4

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....+...+.  ....++.++.+|+.+..            
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3567789999999999999999999999999999999654432221111  01246788899987642            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|+||||||......    ..++++..+++|+.++.++++++...    +  .+||++||...+.....    +.  
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~--  163 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SL--  163 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ET--
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cc--
Confidence            235899999999754332    22346778999999999999987543    2  48999999765432110    00  


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                         .+..+...|+.+|++.|.+++.++.+   .|++++++|||.++++....    ....+........+         .
T Consensus       164 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~  227 (265)
T 1h5q_A          164 ---NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH----MDKKIRDHQASNIP---------L  227 (265)
T ss_dssp             ---TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SCHHHHHHHHHTCT---------T
T ss_pred             ---cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc----cchhHHHHHHhcCc---------c
Confidence               12233478999999999999998876   38999999999999875321    11222222222222         1


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+++++|++++++.
T Consensus       228 ~~~~~~~dva~~~~~  242 (265)
T 1h5q_A          228 NRFAQPEEMTGQAIL  242 (265)
T ss_dssp             SSCBCGGGGHHHHHH
T ss_pred             cCCCCHHHHHHHHHh
Confidence            247888999988764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.87  E-value=2.6e-21  Score=173.29  Aligned_cols=201  Identities=10%  Similarity=0.008  Sum_probs=141.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999999754332221111 12346888999997752            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH-----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA-----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a-----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......    ..++++..+++|+.++.++++++     ++.+ .+||++||...+..             
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  149 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-------------  149 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-------------
Confidence            7999999999654322    22357789999999999999988     3333 48999999765421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         ......|+.+|++.+.+++.++.+    +|+++++++||.|.++...... .....+...+.+..         ...
T Consensus       150 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~---------p~~  216 (257)
T 3imf_A          150 ---GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WISEEMAKRTIQSV---------PLG  216 (257)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTS---------TTC
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc-ccCHHHHHHHHhcC---------CCC
Confidence               122368999999999999988754    4899999999999987532100 00011112222221         223


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+..++|+|++++.
T Consensus       217 r~~~pedvA~~v~~  230 (257)
T 3imf_A          217 RLGTPEEIAGLAYY  230 (257)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            47899999998764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.87  E-value=2.2e-21  Score=175.25  Aligned_cols=203  Identities=14%  Similarity=0.065  Sum_probs=139.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567889999999999999999999999999999999753322111110 01346788889987642            2


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       .++|++|||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+..            
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------  164 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA------------  164 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC------------
Confidence             57999999999754322    223577889999999999999883    3444 9999999876632            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccH--HHHHHHHHHhCCCeEEecCCce
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRV--VSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                          ......|+.+|++.+.+++.++.+.   |+++++++||.|+++.........  ...+...+....+         
T Consensus       165 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------  231 (273)
T 1ae1_A          165 ----LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---------  231 (273)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST---------
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC---------
Confidence                1223689999999999999988764   899999999999998531100000  0112222222221         


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+.+++|+|++++.
T Consensus       232 ~~r~~~p~dvA~~v~~  247 (273)
T 1ae1_A          232 MGRAGKPQEVSALIAF  247 (273)
T ss_dssp             TCSCBCHHHHHHHHHH
T ss_pred             CCCCcCHHHHHHHHHH
Confidence            1247899999998764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=1.6e-21  Score=176.43  Aligned_cols=164  Identities=14%  Similarity=0.045  Sum_probs=122.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc----ccCCCceEEeeCcccccc-----c------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH----HFGNPNFELIRHDVVEPL-----L------  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~-----~------  178 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+....    .....++.++.+|+.++.     +      
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999964322211111    011236788889987642     2      


Q ss_pred             -CCCCEEEEcccCCCCCC--------CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCccc-ccCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEV-YGDPLQHPQKE  244 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~--------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v-~g~~~~~~~~E  244 (340)
                       .++|+||||||......        ..++++..+++|+.++.++++++...    +.+||++||... +..        
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------  155 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA--------  155 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC--------
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccC--------
Confidence             27999999999754321        23357789999999999999888653    569999999765 421        


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                              ......|+.+|++.+.+++.++.+   +|+++++++||.|+++.
T Consensus       156 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  199 (278)
T 1spx_A          156 --------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  199 (278)
T ss_dssp             --------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence                    122367999999999999998865   58999999999999875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.87  E-value=2e-21  Score=173.64  Aligned_cols=161  Identities=15%  Similarity=0.018  Sum_probs=122.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc-----c-------C
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----L-------L  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~-------~  179 (340)
                      +++|++|||||+|+||.+++++|+++|++|++++|+.+  . .....+  ...++.++.+|+.++.     +       .
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~-~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--A-PALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--H-HHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--H-HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999754  1 111111  1245778888987642     2       2


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||...+..              
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  144 (255)
T 2q2v_A           79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG--------------  144 (255)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC--------------
Confidence            7999999999754322    23357789999999887776665    55554 8999999775532              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  188 (255)
T 2q2v_A          145 --STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL  188 (255)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence              112368999999999999999876   38999999999998874

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.87  E-value=2.6e-21  Score=173.50  Aligned_cols=197  Identities=19%  Similarity=0.216  Sum_probs=140.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c-------CC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L-------LE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~-------~~  180 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+...+... .+ ..++.++.+|+.++.     +       .+
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK-KL-GNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            5678899999999999999999999999999999997654332221 12 246788899987642     2       27


Q ss_pred             CCEEEEcccCCCCCC----------CcCChhhHHHHHHHHHHHHHHHHHHc----------CC-eEEEEeCcccccCCCC
Q 019470          181 VDQIYHLACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKRV----------GA-RFLLTSTSEVYGDPLQ  239 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----------~~~~~~~~~~~Nv~g~~~ll~~a~~~----------~~-~~i~~SS~~v~g~~~~  239 (340)
                      +|+||||||......          ..++++..+++|+.++.++++++...          +. +||++||...+...  
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--  164 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ--  164 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC--
Confidence            999999999754321          22347789999999999999988754          44 89999998765321  


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeE
Q 019470          240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  316 (340)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~  316 (340)
                                    .....|+.+|++.+.+++.++.+   .|+++++++||.+.++....    ....+...+.+..+. 
T Consensus       165 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~-  225 (265)
T 2o23_A          165 --------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS----LPEKVCNFLASQVPF-  225 (265)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSS-
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc----cCHHHHHHHHHcCCC-
Confidence                          12368999999999999988876   48999999999998874211    101111111111111 


Q ss_pred             EecCCceeEccccHHHHHHHHHh
Q 019470          317 VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       317 ~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                             ...+++++|+|++++.
T Consensus       226 -------~~~~~~~~dva~~~~~  241 (265)
T 2o23_A          226 -------PSRLGDPAEYAHLVQA  241 (265)
T ss_dssp             -------SCSCBCHHHHHHHHHH
T ss_pred             -------cCCCCCHHHHHHHHHH
Confidence                   0247899999998764

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.87  E-value=2.4e-21  Score=172.67  Aligned_cols=198  Identities=18%  Similarity=0.139  Sum_probs=135.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC-CCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+. +...+.+. . ...++.++.+|+.++.            +.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-N-LGRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-H-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-h-cCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35678999999999999999999999999999999975 32222111 1 1246788889987742            24


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||...+..              
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  147 (249)
T 2ew8_A           82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK--------------  147 (249)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--------------
Confidence            7999999999754322    22357789999999988888874    45554 9999999876532              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|.++....   ...... ....+.. .      .....+
T Consensus       148 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~-~~~~~~~-~------~~~~~~  214 (249)
T 2ew8_A          148 --IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA---SALSAM-FDVLPNM-L------QAIPRL  214 (249)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CT-T------SSSCSC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh---ccccch-hhHHHHh-h------CccCCC
Confidence              122368999999999999999876   48999999999998875210   000000 0011110 0      112347


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|+|++++.
T Consensus       215 ~~p~dva~~~~~  226 (249)
T 2ew8_A          215 QVPLDLTGAAAF  226 (249)
T ss_dssp             CCTHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            899999998764

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.87  E-value=1.1e-21  Score=174.02  Aligned_cols=197  Identities=12%  Similarity=0.096  Sum_probs=130.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|+++||||+|+||++++++|+++|++|+++++..+...+.....+  ...++.++.+|+.++.            +
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999443222222111111  1346788899997742            1


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCc-ccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTS-EVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~-~v~g~~~~~~~~E~~~~  248 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++..    .+. +||++||. +.++.+           
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------  150 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA-----------  150 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-----------
Confidence            27999999999754221    3346788999999999998887754    454 89999996 444321           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                            ....|+.+|++.|.+++.++.+.   ++++++++||.+.++...    .+...+...+..+.         ...
T Consensus       151 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~---------~~~  211 (247)
T 2hq1_A          151 ------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD----VLPDKVKEMYLNNI---------PLK  211 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----TSCHHHHHHHHTTS---------TTS
T ss_pred             ------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh----hcchHHHHHHHhhC---------CCC
Confidence                  12679999999999999988764   899999999999775311    01112222222222         223


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+++++|++++++.
T Consensus       212 ~~~~~~dva~~~~~  225 (247)
T 2hq1_A          212 RFGTPEEVANVVGF  225 (247)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
Confidence            58899999998764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.87  E-value=1.8e-21  Score=176.37  Aligned_cols=201  Identities=14%  Similarity=0.085  Sum_probs=142.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+...+... .. ..++..+.+|+.++.            +.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN-EI-GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46788999999999999999999999999999999997543222211 11 246788889987742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..++++..+++|+.|+.++++++..    .+. +||++||...+.               
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  165 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS---------------  165 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc---------------
Confidence            7999999999754332    2235778899999999999888743    333 899999977652               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCC--CCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCI--DDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.|.++....  ....-.......+..         .....
T Consensus       166 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  235 (277)
T 4dqx_A          166 -AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNA---------RAVMD  235 (277)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHT---------TSTTC
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHh---------cCccc
Confidence             22233689999999999999998764   8999999999997753100  000000111111222         22234


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+.+++|+|++++.
T Consensus       236 r~~~pedvA~~v~~  249 (277)
T 4dqx_A          236 RMGTAEEIAEAMLF  249 (277)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            57889999999864

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.87  E-value=6.7e-22  Score=177.47  Aligned_cols=198  Identities=13%  Similarity=0.043  Sum_probs=141.3

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCC--cccccccccCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTG--RKENVMHHFGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~-----------  177 (340)
                      .+++|+++||||+  |+||++++++|+++|++|++++|+...  ..+.+....  ..+.++.+|+.++.           
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHHHH
Confidence            4567899999999  999999999999999999999997531  011111111  23678889987742           


Q ss_pred             -cCCCCEEEEcccCCCC----C----CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----V----HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~----~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|+||||||....    .    ...++++..+++|+.++.++++++...   +.+||++||...+..         
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------  153 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV---------  153 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB---------
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC---------
Confidence             1368999999997542    1    123457789999999999999999775   348999999765421         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                             ......|+.+|++.+.+++.++.+.   |+++++++||.|+++....  ......+...+.+..++       
T Consensus       154 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~p~-------  217 (261)
T 2wyu_A          154 -------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS--IPGFTKMYDRVAQTAPL-------  217 (261)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG--CTTHHHHHHHHHHHSTT-------
T ss_pred             -------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh--ccccHHHHHHHHhcCCC-------
Confidence                   1123579999999999999998764   8999999999999975321  11112333333332222       


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                        ..+.+++|++++++.
T Consensus       218 --~~~~~~~dva~~v~~  232 (261)
T 2wyu_A          218 --RRNITQEEVGNLGLF  232 (261)
T ss_dssp             --SSCCCHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHH
Confidence              236789999998764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=2.2e-21  Score=172.50  Aligned_cols=199  Identities=15%  Similarity=0.089  Sum_probs=140.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~V  184 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+ .. .+  .++.++.+|+.++.        +.++|+|
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~-~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~l   78 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-LE-KY--PGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-GG-GS--TTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH-hc--cCceEEEeeCCCHHHHHHHHHHhCCCCEE
Confidence            3567899999999999999999999999999999996433221 11 11  26788889987642        3479999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      |||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+....               ..
T Consensus        79 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------~~  143 (246)
T 2ag5_A           79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---------------VN  143 (246)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---------------TT
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC---------------CC
Confidence            99999764332    2235778899999999999988753    344 999999976542110               12


Q ss_pred             CChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          256 RSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      ...|+.+|++.+.+++.++.+.   |+++++++||.++++......  ..........+.+..+         ...+.++
T Consensus       144 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  214 (246)
T 2ag5_A          144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATA  214 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC---------CCCCCCH
Confidence            3689999999999999998764   899999999999997421000  0000112222222221         1237889


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|+|++++.
T Consensus       215 ~dvA~~v~~  223 (246)
T 2ag5_A          215 EEIAMLCVY  223 (246)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998864

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.87  E-value=2.5e-21  Score=174.32  Aligned_cols=192  Identities=19%  Similarity=0.121  Sum_probs=136.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.......          ....+|+.+.            .+.+
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~----------~~~~~Dv~~~~~~~~~~~~~~~~~g~   94 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD----------LHLPGDLREAAYADGLPGAVAAGLGR   94 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS----------EECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh----------hccCcCCCCHHHHHHHHHHHHHhcCC
Confidence            56789999999999999999999999999999999865432211          2224565443            1247


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+.                
T Consensus        95 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------  158 (266)
T 3uxy_A           95 LDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR----------------  158 (266)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----------------
Confidence            999999999865433    23457788999999999999988    44444 999999976542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCC---CccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCID---DGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                      +......|+.+|++.+.+++.++.+.   |+++++++||.|.++.....   ...........+.+.         ....
T Consensus       159 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~  229 (266)
T 3uxy_A          159 PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT---------VPLG  229 (266)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT---------STTS
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc---------CCCC
Confidence            11233689999999999999998764   89999999999988631000   000001111222222         2334


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+.+++|+|++++.
T Consensus       230 r~~~pedvA~~v~~  243 (266)
T 3uxy_A          230 RIAEPEDIADVVLF  243 (266)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            58899999999864

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.87  E-value=4.8e-22  Score=186.16  Aligned_cols=184  Identities=16%  Similarity=0.151  Sum_probs=132.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-cccccccCCCceEEeeCc-cccc-----ccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHD-VVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~D-~~~~-----~~~~~D~Vih~  187 (340)
                      ++|+|+|||||||||++|+++|+++|++|++++|+..... ..+.   ...+++++.+| +.++     .+.++|+|||+
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~   80 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   80 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHHhcCCEEEEc
Confidence            3578999999999999999999999999999999754321 1111   12367888899 7654     46789999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcc--cccCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE--VYGDPLQHPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~--v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      ++...       .    +.|..+ .+++++|++.+ + +|||+||..  .|+.                 .+.+.|+.+|
T Consensus        81 a~~~~-------~----~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------------~~~~~y~~sK  131 (352)
T 1xgk_A           81 TTSQA-------G----DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------------WPAVPMWAPK  131 (352)
T ss_dssp             CCSTT-------S----CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------------CCCCTTTHHH
T ss_pred             CCCCC-------c----HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------------CCCccHHHHH
Confidence            87421       0    247777 99999999998 7 899999975  3321                 1125799999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHH-HHHhCCCe--EEecCCceeEccccH-HHHHHHHHh
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVA-QALRKEPL--TVYGDGKQTRSFQFV-SDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~v~v-~Dva~a~~~  339 (340)
                      +.+|.+++.    .+++++++||+ +||++....   +. .++. .....+..  .+++++++.++++|+ +|++++++.
T Consensus       132 ~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~---~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~  202 (352)
T 1xgk_A          132 FTVENYVRQ----LGLPSTFVYAG-IYNNNFTSL---PY-PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  202 (352)
T ss_dssp             HHHHHHHHT----SSSCEEEEEEC-EEGGGCBSS---SC-SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHH----cCCCEEEEecc-eecCCchhc---cc-ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHH
Confidence            999999864    48999999987 688753211   10 0111 00122232  346677889999999 999999864

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.87  E-value=2e-21  Score=173.08  Aligned_cols=197  Identities=15%  Similarity=0.070  Sum_probs=142.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++|+++||||+|+||++++++|+++|++|++++|+.+...+.. ..+ ...+..+.+|+.++.            +.
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS-DYL-GDNGKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-cccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3567889999999999999999999999999999999754322211 111 124677888887742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.|+.++++++..    .+. +||++||...+..              
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--------------  148 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG--------------  148 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC--------------
Confidence            7999999999765433    2345788999999999999998743    343 8999999664421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|..+.....    ............+         ...+
T Consensus       149 --~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~p---------~~r~  213 (248)
T 3op4_A          149 --NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL----NDEQRTATLAQVP---------AGRL  213 (248)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS----CHHHHHHHHHTCT---------TCSC
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc----CHHHHHHHHhcCC---------CCCC
Confidence              122368999999999999999876   489999999999988753211    1222223333322         2347


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|++++++.
T Consensus       214 ~~p~dva~~v~~  225 (248)
T 3op4_A          214 GDPREIASAVAF  225 (248)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            899999998764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.87  E-value=1.3e-21  Score=175.87  Aligned_cols=154  Identities=17%  Similarity=0.120  Sum_probs=122.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+.          ..++.++.+|+.++.            +.+
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   74 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGS   74 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999996543          235677888887642            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++..    .+ .+||++||...+..               
T Consensus        75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  139 (264)
T 2dtx_A           75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII---------------  139 (264)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC---------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC---------------
Confidence            999999999754332    2335788999999999999988854    23 48999999876532               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhhC--CcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~g--i~~~ivRp~~i~G~  292 (340)
                       ......|+.+|++.+.+++.++.+.+  +++++++||.+.++
T Consensus       140 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~  181 (264)
T 2dtx_A          140 -TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTP  181 (264)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence             12236899999999999999987754  99999999999775

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.87  E-value=1e-21  Score=176.09  Aligned_cols=164  Identities=15%  Similarity=0.055  Sum_probs=123.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC---CCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG---NPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+.....+.   ..++.++.+|+.++.            +
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999875431111111110   245778888987742            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+..             
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  148 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-------------  148 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-------------
Confidence            36999999999754322    233577899999999999988874    3344 9999999775521             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       149 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T 1x1t_A          149 ---SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL  192 (260)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence               1223689999999999999988764   8999999999998875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.87  E-value=8e-22  Score=180.73  Aligned_cols=203  Identities=18%  Similarity=0.108  Sum_probs=138.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.+..            +.
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            367889999999999999999999999999999999754332211111 12346888999997742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||......    ..++++..+++|+.|+.++++++.    +.+  .+||++||...+.              
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  173 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--------------  173 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--------------
Confidence            7999999999764332    233577899999999999999874    333  3899999976542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHH-----HHHhCCCeEEecCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVA-----QALRKEPLTVYGDG  321 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g  321 (340)
                        +......|+.||++.+.+++.++.+.   |+++++++||.|..+..        .....     ......+...++..
T Consensus       174 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T 3tjr_A          174 --PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV--------SNSERIRGADYGMSATPEGAFGPL  243 (301)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH--------HHHHHHC-----------------
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc--------cccccccchhhccccChhhhcccc
Confidence              11233689999999999999988764   89999999999977531        11100     00111122223333


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                      .....+++++|+|++++.
T Consensus       244 ~~~~~~~~pedvA~~i~~  261 (301)
T 3tjr_A          244 PTQDESVSADDVARLTAD  261 (301)
T ss_dssp             -----CCCHHHHHHHHHH
T ss_pred             ccccCCCCHHHHHHHHHH
Confidence            344578999999999875

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.87  E-value=1.8e-21  Score=171.98  Aligned_cols=185  Identities=19%  Similarity=0.147  Sum_probs=136.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccC------CCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLL------EVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~------~~D~V  184 (340)
                      +|+++||||+|+||++++++|+++|++|++++|+.. .          ..+.++.+|+.++     .+.      ++|+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence            568999999999999999999999999999999653 1          1336777888664     222      78999


Q ss_pred             EEcccCCCCCCCc----C----ChhhHHHHHHHHHHHHHHHHHHc----C-------CeEEEEeCcccccCCCCCCCCCC
Q 019470          185 YHLACPASPVHYK----F----NPVKTIKTNVVGTLNMLGLAKRV----G-------ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       185 ih~Ag~~~~~~~~----~----~~~~~~~~Nv~g~~~ll~~a~~~----~-------~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      |||||........    +    +++..+++|+.++.++++++...    +       .+||++||...+...        
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  142 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ--------  142 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC--------
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC--------
Confidence            9999975433211    1    56788999999999999988653    1       189999998776421        


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                              .+...|+.+|++.+.+++.++.+.   |++++++|||.++++....    +...+...+.+..++       
T Consensus       143 --------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~-------  203 (242)
T 1uay_A          143 --------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG----LPEKAKASLAAQVPF-------  203 (242)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT----SCHHHHHHHHTTCCS-------
T ss_pred             --------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc----cchhHHHHHHhhCCC-------
Confidence                    223689999999999999988764   8999999999999874211    112233333333222       


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                       ...+++++|+|++++.
T Consensus       204 -~~~~~~~~dva~~~~~  219 (242)
T 1uay_A          204 -PPRLGRPEEYAALVLH  219 (242)
T ss_dssp             -SCSCCCHHHHHHHHHH
T ss_pred             -cccCCCHHHHHHHHHH
Confidence             0247899999998864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.87  E-value=5.4e-22  Score=179.77  Aligned_cols=162  Identities=17%  Similarity=0.079  Sum_probs=125.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+...+... .+ ..++..+.+|+.++.            +.+
T Consensus        26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT-KI-GCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HH-CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hc-CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678899999999999999999999999999999996543322221 11 346788889987752            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..++++..+++|+.|+.++++++..    .+. +||++||...+.                
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----------------  167 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV----------------  167 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----------------
Confidence            999999999764332    2345778999999999999988744    343 899999976542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      +......|+.+|++.+.+++.++.+   +|+++++++||.|+++
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  211 (277)
T 3gvc_A          168 AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP  211 (277)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCc
Confidence            1223368999999999999998876   5899999999999886

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.87  E-value=2.3e-21  Score=173.46  Aligned_cols=200  Identities=16%  Similarity=0.149  Sum_probs=144.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+...+.. ..+ ..++.++.+|+.++.            +.+
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIR-EEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            457889999999999999999999999999999999654322211 111 246788899987742            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|++|||||......    ..++++..+++|+.++.++++++...   +.+||++||...+..                .
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~  146 (255)
T 4eso_A           83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG----------------H  146 (255)
T ss_dssp             EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB----------------C
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC----------------C
Confidence            999999999765333    23457789999999999999999764   238999999775522                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                      .....|+.+|++.+.+++.++.+.   |+++++++||.|.++.....  .......+.....+..+         ...+.
T Consensus       147 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~  217 (255)
T 4eso_A          147 PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP---------MKRNG  217 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST---------TSSCB
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC---------CCCCc
Confidence            223689999999999999998764   89999999999998753211  11112222222222222         23467


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       218 ~pedvA~~v~~  228 (255)
T 4eso_A          218 TADEVARAVLF  228 (255)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            89999998764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.87  E-value=1e-21  Score=178.36  Aligned_cols=177  Identities=15%  Similarity=0.092  Sum_probs=130.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc--------c---cccc--ccCCCceEEeeCcccccc--
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK--------E---NVMH--HFGNPNFELIRHDVVEPL--  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~--------~---~~~~--~~~~~~~~~~~~D~~~~~--  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.....        +   ....  .....++.++.+|+.+..  
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            467889999999999999999999999999999998632211        0   0000  012357888999997752  


Q ss_pred             ----------cCCCCEEEEcccCCCCC--CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCC
Q 019470          178 ----------LLEVDQIYHLACPASPV--HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       178 ----------~~~~D~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~  242 (340)
                                +.++|+||||||.....  ...++++..+++|+.++.++++++...   +.+||++||...+......+.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  166 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG  166 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence                      23799999999976443  233457889999999999999999765   238999999765543222222


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCC
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~  294 (340)
                      .|.     .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++..
T Consensus       167 ~~~-----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~  216 (287)
T 3pxx_A          167 AGG-----PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML  216 (287)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred             ccc-----cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence            222     222233679999999999999998875   89999999999998853

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.87  E-value=5.2e-21  Score=167.07  Aligned_cols=177  Identities=14%  Similarity=0.161  Sum_probs=126.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHH-hCCCeEEEEeCCCC-CcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLI-ARGDSVIVVDNFFT-GRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll-~~G~~V~~l~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~A  188 (340)
                      +++|+||||+|+||++++++|+ ++|++|++++|+.. ...+ +.  ....++.++.+|+.++     .+.++|+|||||
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-~~--~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a   81 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-EI--IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGA   81 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-HH--HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-hc--cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence            4569999999999999999999 89999999999643 2211 10  0235788899998764     457899999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS-CYDEGKRTA  266 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK~~~  266 (340)
                      |..               |+. +.++++++++.++ +||++||..+|+......   ..|..    .... .|+.+|..+
T Consensus        82 g~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~---~~~~~----~~~~~~y~~~K~~~  138 (221)
T 3r6d_A           82 MES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVAL---EKWTF----DNLPISYVQGERQA  138 (221)
T ss_dssp             CCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHH---HHHHH----HTSCHHHHHHHHHH
T ss_pred             CCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccc---ccccc----cccccHHHHHHHHH
Confidence            842               455 9999999999986 899999998886422100   00000    0112 799999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce-eEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ-TRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~v~v~Dva~a~~~  339 (340)
                      |.+++    +.+++++++|||.++++...                 ........+.. ...+++.+|+|++++.
T Consensus       139 e~~~~----~~~i~~~~vrpg~v~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~dvA~~~~~  191 (221)
T 3r6d_A          139 RNVLR----ESNLNYTILRLTWLYNDPEX-----------------TDYELIPEGAQFNDAQVSREAVVKAIFD  191 (221)
T ss_dssp             HHHHH----HSCSEEEEEEECEEECCTTC-----------------CCCEEECTTSCCCCCEEEHHHHHHHHHH
T ss_pred             HHHHH----hCCCCEEEEechhhcCCCCC-----------------cceeeccCCccCCCceeeHHHHHHHHHH
Confidence            99884    46999999999999997321                 01111111111 1248999999999865

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.87  E-value=1.9e-21  Score=175.04  Aligned_cols=165  Identities=18%  Similarity=0.164  Sum_probs=123.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+...   ......++.++.+|+.++.            
T Consensus        10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999997533221111   1111346788889987742            


Q ss_pred             cCCCCEEEEcccCCCC-CC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~-~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|+||||||.... ..    ..++++..+++|+.|+.++++++    ++.+ .+||++||...+..           
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  158 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----------  158 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-----------
Confidence            2368999999997543 11    22457789999999988776655    4445 49999999765421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                           ......|+.+|++.+.+++.++.+   .|+++++++||.|+++.
T Consensus       159 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  202 (267)
T 1iy8_A          159 -----IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM  202 (267)
T ss_dssp             -----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence                 122368999999999999998876   48999999999998863

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.86  E-value=9.7e-22  Score=176.75  Aligned_cols=202  Identities=12%  Similarity=0.091  Sum_probs=142.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999999654322211111 12356888999997752            23


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......     ..++++..+++|+.++.++++++..    .+.+||++||...+..              
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  153 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS--------------  153 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC--------------
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC--------------
Confidence            7999999998742211     2245778999999999999988643    3459999999775521              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCC-------ccHHHHHHHHHHhCCCeEEecC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDD-------GRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                        ......|+.+|++.+.+++.++.+   +|+++++++||.|+++......       ......+...+..         
T Consensus       154 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  222 (264)
T 3ucx_A          154 --QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA---------  222 (264)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT---------
T ss_pred             --CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc---------
Confidence              122368999999999999999876   5899999999999887421000       0000112222222         


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                      ......+.+++|+|++++.
T Consensus       223 ~~p~~r~~~p~dvA~~v~~  241 (264)
T 3ucx_A          223 GSDLKRLPTEDEVASAILF  241 (264)
T ss_dssp             TSSSSSCCBHHHHHHHHHH
T ss_pred             cCCcccCCCHHHHHHHHHH
Confidence            2233458899999998764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.86  E-value=1.1e-20  Score=166.75  Aligned_cols=194  Identities=14%  Similarity=0.121  Sum_probs=142.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc--------ccCCCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------LLLEVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~~D~Vi  185 (340)
                      .++|++|||||+++||+++++.|+++|++|++++|+.+...+     ....++..+.+|+.++        .+.++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-----PRHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-----CCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-----hhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            478999999999999999999999999999999997554322     2235678888998775        345799999


Q ss_pred             EcccCCCCCC--CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          186 HLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       186 h~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      ||||...+..  ..++|++.+++|+.|+..+.+++..    .+.++|++||.....                +......|
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----------------~~~~~~~Y  147 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF----------------GSADRPAY  147 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS----------------CCSSCHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC----------------CCCCCHHH
Confidence            9999765433  2346889999999999988887643    345899999965431                11122689


Q ss_pred             HHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHH
Q 019470          260 DEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRL  336 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a  336 (340)
                      +.||++.+.+.+.++.+   +|++++.|.||.|-.+........  ....+.+.+..|+.         -+...+|++.+
T Consensus       148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~--~~~~~~~~~~~Plg---------R~g~peeiA~~  216 (242)
T 4b79_A          148 SASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD--VEATRRIMQRTPLA---------RWGEAPEVASA  216 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC--HHHHHHHHHTCTTC---------SCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC--HHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence            99999999999999876   489999999999987642111111  23344555554433         25668899988


Q ss_pred             HHh
Q 019470          337 TET  339 (340)
Q Consensus       337 ~~~  339 (340)
                      ++.
T Consensus       217 v~f  219 (242)
T 4b79_A          217 AAF  219 (242)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.86  E-value=7.7e-22  Score=176.01  Aligned_cols=198  Identities=15%  Similarity=0.098  Sum_probs=120.0

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------  177 (340)
                      .+++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678899999999999999999999999999999999654332211111 12356788899997752            


Q ss_pred             cCCCCEEEEcccCCCCC-------CCcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPV-------HYKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~-------~~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      +.++|+||||||.....       ...++++..+++|+.++.++++++    ++.+. +||++||...+.          
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  153 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL----------  153 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC----------
Confidence            23799999999973211       123356789999999977776665    34444 899999987651          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                               +...|+.+|++.+.+++.++.+.   |+++++++||.|+++....   .....+...+.++.         
T Consensus       154 ---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~---------  212 (253)
T 3qiv_A          154 ---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRT---TTPKEMVDDIVKGL---------  212 (253)
T ss_dssp             ---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------
T ss_pred             ---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhh---cCcHHHHHHHhccC---------
Confidence                     11569999999999999998875   8999999999999975311   11112222222222         


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ....+..++|++++++.
T Consensus       213 ~~~~~~~~~dva~~~~~  229 (253)
T 3qiv_A          213 PLSRMGTPDDLVGMCLF  229 (253)
T ss_dssp             -------CCHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHH
Confidence            22345667888888754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.86  E-value=3.3e-21  Score=172.72  Aligned_cols=197  Identities=15%  Similarity=0.052  Sum_probs=140.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++|++|||||+|+||++++++|+++|++|+++ +|+.....+ ....+  ...++.++.+|+.++.            +.
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALE-TAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999987 664332211 11111  2346888999997752            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------  146 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR---------------  146 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC---------------
Confidence            6899999999654332    223477899999999999998884    3444 899999976552               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.|.++......  ....+...+....+         ...+
T Consensus       147 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p---------~~r~  214 (258)
T 3oid_A          147 -YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP--NREDLLEDARQNTP---------AGRM  214 (258)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT--THHHHHHHHHHHCT---------TSSC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc--cCHHHHHHHHhcCC---------CCCC
Confidence             12233789999999999999998764   899999999999887432111  11223333333322         2347


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|++++++.
T Consensus       215 ~~~~dva~~v~~  226 (258)
T 3oid_A          215 VEIKDMVDTVEF  226 (258)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            889999999764

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.86  E-value=3.6e-21  Score=171.01  Aligned_cols=198  Identities=11%  Similarity=-0.030  Sum_probs=142.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+..... ....++.++.+|+.++.            ..
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999999654322211110 12346888899997742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+..              
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  147 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG--------------  147 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--------------
Confidence            6899999999764432    2345778999999999999988743    333 8999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.+.++....    ........+...         .....+
T Consensus       148 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~---------~~~~~~  212 (247)
T 3lyl_A          148 --NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK----LTDEQKSFIATK---------IPSGQI  212 (247)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT----SCHHHHHHHHTT---------STTCCC
T ss_pred             --CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh----ccHHHHHHHhhc---------CCCCCC
Confidence              122368999999999999998876   48999999999998875321    112222222222         223458


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|+|++++.
T Consensus       213 ~~~~dva~~i~~  224 (247)
T 3lyl_A          213 GEPKDIAAAVAF  224 (247)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            899999998764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.86  E-value=1.1e-21  Score=175.26  Aligned_cols=163  Identities=19%  Similarity=0.180  Sum_probs=123.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+ ....+ ..++.++.+|+.++.            +.+
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-LAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999986432221 11112 246788889987742            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|+||||||......    ..++++..+++|+.++.++.+++.    +.+.+||++||...+..                
T Consensus        81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  144 (253)
T 1hxh_A           81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP----------------  144 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCC----------------
Confidence            899999999754322    223577899999998887776653    33458999999876531                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---h--CCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---A--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~--gi~~~ivRp~~i~G~~  293 (340)
                      ......|+.+|++.+.+++.++.+   .  |+++++++||.++++.
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~  190 (253)
T 1hxh_A          145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM  190 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence            122368999999999999998876   3  8999999999999864

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.9e-21  Score=176.47  Aligned_cols=199  Identities=14%  Similarity=0.054  Sum_probs=131.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|......+.....+  ...++.++.+|+.++.            +
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999974333222221111  2356888999998752            2


Q ss_pred             CCCCEEEEcccCCC--CCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C----CeEEEEeCcccccCCCCCCCCC
Q 019470          179 LEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G----ARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~--~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~----~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                      .++|++|||||...  ...    ..++++..+++|+.|+.++++++...    +    .+||++||...+..        
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--------  177 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT--------  177 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC--------
Confidence            37999999999732  111    23457788999999999998887443    2    38999999765421        


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                              ......|+.+|++.+.+++.++.+   .|+++++++||.|.++....    ....+...+..        ..
T Consensus       178 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~--------~~  237 (280)
T 4da9_A          178 --------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA----VSGKYDGLIES--------GL  237 (280)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------
T ss_pred             --------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh----cchhHHHHHhh--------cC
Confidence                    122367999999999999999877   58999999999998875311    11111111111        01


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                      .....+..++|+|++++.
T Consensus       238 ~p~~r~~~pedvA~~v~~  255 (280)
T 4da9_A          238 VPMRRWGEPEDIGNIVAG  255 (280)
T ss_dssp             ----CCBCHHHHHHHHHH
T ss_pred             CCcCCcCCHHHHHHHHHH
Confidence            233458899999998864

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=1.2e-21  Score=179.27  Aligned_cols=201  Identities=13%  Similarity=0.105  Sum_probs=139.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc------cCCCceEEeeCcccccc---------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH------FGNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~---------  177 (340)
                      .+++++|+||||+|+||.+++++|+++|++|++++|+.+...+...+.      ....++.++.+|+.+..         
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            567889999999999999999999999999999999643322111100      12346888999987742         


Q ss_pred             ---cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc-----CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 ---LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-----GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ---~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~-----~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                         +.++|+||||||......    ..++++..+++|+.++.++++++...     +.+||++||...++.         
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------  165 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---------  165 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC---------
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC---------
Confidence               136999999999643222    22346778999999999999997652     348999999763221         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                              .....|+.+|.+.+.+.+.++.+.   |++++++|||.|+|+............+...+.+..         
T Consensus       166 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------  228 (303)
T 1yxm_A          166 --------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI---------  228 (303)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS---------
T ss_pred             --------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC---------
Confidence                    122579999999999999998764   899999999999998411011111111111111111         


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                      ....+++++|+|++++.
T Consensus       229 p~~~~~~~~dvA~~i~~  245 (303)
T 1yxm_A          229 PAKRIGVPEEVSSVVCF  245 (303)
T ss_dssp             TTSSCBCTHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHH
Confidence            11247889999998864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.86  E-value=2.4e-21  Score=176.00  Aligned_cols=169  Identities=17%  Similarity=0.071  Sum_probs=126.8

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +.++++++|||||+|+||.+++++|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            +
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3567789999999999999999999999999999999754322221111 12346788999997752            2


Q ss_pred             CCCCEEEEcccCCCC-CC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~-~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++|||||.... ..    ..++++..+++|+.|+.++++++    ++.+. +||++||...+...           
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----------  172 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF-----------  172 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-----------
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC-----------
Confidence            379999999997532 11    22357789999999999999988    44554 99999997654210           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~  294 (340)
                         +......|+.+|++.+.+++.++.+   .|+++++++||.|..+..
T Consensus       173 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  218 (283)
T 3v8b_A          173 ---TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS  218 (283)
T ss_dssp             ---CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence               1122368999999999999999877   489999999999988753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.86  E-value=2.9e-21  Score=176.00  Aligned_cols=175  Identities=15%  Similarity=0.066  Sum_probs=133.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------cCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------LLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~D~V  184 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.....+... .+ ..++.++.+|+.+..        +.++|+|
T Consensus        13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           13 SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR-TM-AGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             CCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TS-SSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hh-cCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            5678899999999999999999999999999999997543322221 11 347889999997742        2368999


Q ss_pred             EEcccCCCCCC--CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCC-CCCCCCCCCCCCCCCCCCChHH
Q 019470          185 YHLACPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPL-QHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       185 ih~Ag~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~-~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |||||...+..  ..++++..+++|+.|+.++++++..... +||++||...+.... .....+    ...+..+...|+
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~----~~~~~~~~~~Y~  166 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNW----RSRRYSPWLAYS  166 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTC----SSSCCCHHHHHH
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccc----cccCCCCcchHH
Confidence            99999765332  3456889999999999999999988765 899999977653221 111111    113445557899


Q ss_pred             HHHHHHHHHHHHHHHhh---C--CcEEEEEeCceeCCC
Q 019470          261 EGKRTAETLTMDYHRGA---G--VEVRIARIFNTYGPR  293 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~---g--i~~~ivRp~~i~G~~  293 (340)
                      .||++.+.+++.++.+.   |  +++++++||.|..+.
T Consensus       167 ~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~  204 (291)
T 3rd5_A          167 QSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL  204 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccc
Confidence            99999999999988764   5  999999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.86  E-value=3.2e-21  Score=173.58  Aligned_cols=201  Identities=14%  Similarity=0.093  Sum_probs=143.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...+.  ....++.++.+|+.++.            
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999654322211111  01346888999997752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|++|||||......    ..++++..+++|+.++.++++++..    .+  .+||++||...+.            
T Consensus        96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------  163 (266)
T 4egf_A           96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA------------  163 (266)
T ss_dssp             HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc------------
Confidence            237999999999765433    2234778999999999999888743    23  3899999977652            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                          +......|+.+|++.+.+++.++.+   .|+++++++||.|.++.......  .......+.+..+         .
T Consensus       164 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p---------~  228 (266)
T 4egf_A          164 ----PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG--DEAKSAPMIARIP---------L  228 (266)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC--SHHHHHHHHTTCT---------T
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc--ChHHHHHHHhcCC---------C
Confidence                1222368999999999999999876   48999999999998763110000  0122223333322         2


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+..++|++++++.
T Consensus       229 ~r~~~p~dva~~v~~  243 (266)
T 4egf_A          229 GRFAVPHEVSDAVVW  243 (266)
T ss_dssp             SSCBCHHHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHH
Confidence            347789999998764

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.86  E-value=5.3e-21  Score=174.82  Aligned_cols=204  Identities=13%  Similarity=-0.036  Sum_probs=144.8

Q ss_pred             CCCCCCCCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-------
Q 019470          108 IPLGLKRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-------  177 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-------  177 (340)
                      +...+.+++|++|||||+|  +||++++++|+++|++|++++|+..... ..... .....+.++.+|+.++.       
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK-RVDPLAESLGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHH-HHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence            3444567889999999997  9999999999999999999999743211 11111 01123578889987752       


Q ss_pred             -----cCCCCEEEEcccCCCC----C----CCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCC
Q 019470          178 -----LLEVDQIYHLACPASP----V----HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       178 -----~~~~D~Vih~Ag~~~~----~----~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~  241 (340)
                           +.++|++|||||....    .    ...++++..+++|+.++.++++++...-   .+||++||...+.      
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------  174 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------  174 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc------
Confidence                 2379999999997542    1    1234578899999999999999987642   3899999976542      


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEe
Q 019470          242 QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY  318 (340)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (340)
                                +......|+.+|++.+.+++.++.+.   |+++++++||.|.++....  ......+........++   
T Consensus       175 ----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~p~---  239 (296)
T 3k31_A          175 ----------VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG--ISDFHYILTWNKYNSPL---  239 (296)
T ss_dssp             ----------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS--CHHHHHHHHHHHHHSTT---
T ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc--ccchHHHHHHHHhcCCC---
Confidence                      11223689999999999999998764   8999999999999875321  11112233333332222   


Q ss_pred             cCCceeEccccHHHHHHHHHh
Q 019470          319 GDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       319 ~~g~~~~~~v~v~Dva~a~~~  339 (340)
                            ..+..++|+|++++.
T Consensus       240 ------~r~~~pedvA~~v~f  254 (296)
T 3k31_A          240 ------RRNTTLDDVGGAALY  254 (296)
T ss_dssp             ------SSCCCHHHHHHHHHH
T ss_pred             ------CCCCCHHHHHHHHHH
Confidence                  236778999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.86  E-value=3.4e-21  Score=175.03  Aligned_cols=199  Identities=12%  Similarity=-0.019  Sum_probs=138.8

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      ..+++|+|+||||+|+||+++++.|+++|++|++++|+.+...+..... ....++.++.+|+.+..            +
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            3567789999999999999999999999999999888643222111110 01346788889987642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+...            
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  187 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN------------  187 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC------------
Confidence            46999999999754322    223577899999999888887774    3454 89999997654211            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                          .....|+.+|++.+.+++.++.+.   |+++++++||.+.++....    ....+...+....+         ...
T Consensus       188 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~  250 (285)
T 2c07_A          188 ----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK----ISEQIKKNIISNIP---------AGR  250 (285)
T ss_dssp             ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------CCHHHHHHHHTTCT---------TSS
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh----cCHHHHHHHHhhCC---------CCC
Confidence                122679999999999999988764   8999999999998875311    11222233333221         124


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|+|++++.
T Consensus       251 ~~~~~dvA~~~~~  263 (285)
T 2c07_A          251 MGTPEEVANLACF  263 (285)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            8899999998764

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.86  E-value=3e-21  Score=173.56  Aligned_cols=198  Identities=15%  Similarity=0.023  Sum_probs=140.4

Q ss_pred             CCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||+  |+||.+++++|+++|++|++++|+. ...+...+.. ......++.+|+.++.            +
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            567899999999  9999999999999999999999975 2211111110 0012367788887642            2


Q ss_pred             CCCCEEEEcccCCCC----C-----CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASP----V-----HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~----~-----~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      .++|+||||||....    .     ...++++..+++|+.++.++++++...   +.+||++||...+..          
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------  155 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------  155 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC----------
Confidence            368999999997542    1     223457789999999999999999775   238999999765421          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                            ......|+.+|++.+.+++.++.+.   |+++++++||.|+++.....  .....+...+.+..++        
T Consensus       156 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~p~--------  219 (265)
T 1qsg_A          156 ------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPI--------  219 (265)
T ss_dssp             ------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS--TTHHHHHHHHHHHSTT--------
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc--cccHHHHHHHHhcCCC--------
Confidence                  1123679999999999999998774   89999999999999853211  1122333333332222        


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                       ..+.+++|+|++++.
T Consensus       220 -~~~~~~~dva~~v~~  234 (265)
T 1qsg_A          220 -RRTVTIEDVGNSAAF  234 (265)
T ss_dssp             -SSCCCHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHH
Confidence             237789999998764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.86  E-value=1.7e-21  Score=175.63  Aligned_cols=196  Identities=14%  Similarity=0.066  Sum_probs=141.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|......+.....+  ...++.++.+|+.++.            
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999985433222222111  2346788899997752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|++|||||......    ..++++..+++|+.|+.++++++.    +.+ .+||++||...+..            
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  171 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG------------  171 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC------------
Confidence            237999999999765432    234578899999999999998873    334 49999999664421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                          ......|+.+|++.+.+++.++.+   .|+++++++||.|.++...    ..   ....+.+..+         ..
T Consensus       172 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~---~~~~~~~~~p---------~~  231 (269)
T 4dmm_A          172 ----NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS----EL---AAEKLLEVIP---------LG  231 (269)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC----HH---HHHHHGGGCT---------TS
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc----cc---cHHHHHhcCC---------CC
Confidence                112368999999999999999876   4899999999999887531    11   1122222222         23


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+.+++|+|++++.
T Consensus       232 r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          232 RYGEAAEVAGVVRF  245 (269)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
Confidence            47889999998764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.86  E-value=2e-22  Score=184.92  Aligned_cols=188  Identities=19%  Similarity=0.240  Sum_probs=133.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-cccc--ccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENV--MHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~--~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      +|+|+||||||+||++++++|+++|++|++++|+.... .+..  ...+...+++++.+|+.++     .+.++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            56899999999999999999999999999999975432 1110  0111234678888888764     46789999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CChHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKR  264 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~  264 (340)
                      ++....           ..|+.++.+++++|++.| + +||+ |   +||.....+  +      .+..+ ...| .+|.
T Consensus        84 a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~--~------~~~~p~~~~y-~sK~  139 (313)
T 1qyd_A           84 LAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM--E------HALQPGSITF-IDKR  139 (313)
T ss_dssp             CCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC--C------CCCSSTTHHH-HHHH
T ss_pred             Cccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc--c------cCCCCCcchH-HHHH
Confidence            986432           137788999999999998 7 7774 3   455322211  1      12223 3468 9999


Q ss_pred             HHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHH----HHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQ----ALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.+++    +.+++++++||+.++|....        .+...    ...++.+.++++++..++|++++|++++++.
T Consensus       140 ~~e~~~~----~~g~~~~ilrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~  206 (313)
T 1qyd_A          140 KVRRAIE----AASIPYTYVSSNMFAGYFAG--------SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIK  206 (313)
T ss_dssp             HHHHHHH----HTTCCBCEEECCEEHHHHTT--------TSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHH
T ss_pred             HHHHHHH----hcCCCeEEEEeceecccccc--------ccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHH
Confidence            9999874    45899999999999874321        11110    1233445567888899999999999999865

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.86  E-value=4.6e-22  Score=178.34  Aligned_cols=165  Identities=16%  Similarity=0.021  Sum_probs=125.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++..+.+|+.+..            +.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999999653322111110 01245778888887642            23


Q ss_pred             CCCEEEEcccCCCC-CC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~-~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||.... ..    ..++++..+++|+.++.++++++.    +.+. +||++||...+..             
T Consensus        91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  157 (260)
T 2zat_A           91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-------------  157 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-------------
Confidence            79999999996431 11    223477899999999999988874    4454 8999999876632             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.+.+++.++.+.   |+++++++||.+.++.
T Consensus       158 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  201 (260)
T 2zat_A          158 ---FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF  201 (260)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence               1223689999999999999998764   8999999999998874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.86  E-value=2.1e-21  Score=174.09  Aligned_cols=165  Identities=12%  Similarity=0.032  Sum_probs=124.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC----CCceEEeeCcccccc-----cC----
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPL-----LL----  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~-----~~----  179 (340)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+.. ..+.    ..++.++.+|+.++.     +.    
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAA-SRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999643222111 1111    226788889987642     11    


Q ss_pred             --CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          180 --EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       180 --~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                        ++|+||||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+..            
T Consensus        83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  150 (260)
T 2z1n_A           83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP------------  150 (260)
T ss_dssp             TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------
T ss_pred             hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC------------
Confidence              4999999999754322    223577899999999977777663    4454 8999999876532            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~  294 (340)
                          ......|+.+|++.+.+++.++.+.   |+++++++||.|+++..
T Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  195 (260)
T 2z1n_A          151 ----WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV  195 (260)
T ss_dssp             ----CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence                1223689999999999999988764   89999999999999853

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.86  E-value=5.4e-21  Score=170.43  Aligned_cols=191  Identities=14%  Similarity=0.066  Sum_probs=134.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIY  185 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vi  185 (340)
                      ...++|+++||||+|+||++++++|+++|++|++++|+.+.    .. .+  ..+.++ +|+.+.      .+.++|+||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~-~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv   86 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LK-RS--GHRYVV-CDLRKDLDLLFEKVKEVDILV   86 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HH-HT--CSEEEE-CCTTTCHHHHHHHSCCCSEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HH-hh--CCeEEE-eeHHHHHHHHHHHhcCCCEEE
Confidence            35788899999999999999999999999999999996411    11 11  244555 776211      223799999


Q ss_pred             EcccCCCCCC----CcCChhhHHHHHHHHHHHHHHH----HHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          186 HLACPASPVH----YKFNPVKTIKTNVVGTLNMLGL----AKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       186 h~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~----a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      ||||......    ..++++..+++|+.++.+++++    +++.+. +||++||...+..                ....
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~~  150 (249)
T 1o5i_A           87 LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP----------------IENL  150 (249)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------CTTB
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC----------------CCCC
Confidence            9999754332    2234778999999998776554    445554 9999999877632                1223


Q ss_pred             ChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHH-HHHhCCCeEEecCCceeEccccHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVA-QALRKEPLTVYGDGKQTRSFQFVSD  332 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~v~v~D  332 (340)
                      ..|+.+|++.+.+++.++.+   .|+++++++||.++++....    ....+.. .+....+         ...+++++|
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~p---------~~~~~~~~d  217 (249)
T 1o5i_A          151 YTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE----LLSEEKKKQVESQIP---------MRRMAKPEE  217 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH----HSCHHHHHHHHTTST---------TSSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc----cchhhHHHHHHhcCC---------CCCCcCHHH
Confidence            68999999999999998876   58999999999999875210    0011112 2222211         234889999


Q ss_pred             HHHHHHh
Q 019470          333 LVRLTET  339 (340)
Q Consensus       333 va~a~~~  339 (340)
                      +|++++.
T Consensus       218 vA~~i~~  224 (249)
T 1o5i_A          218 IASVVAF  224 (249)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.86  E-value=1.5e-21  Score=176.96  Aligned_cols=201  Identities=14%  Similarity=0.019  Sum_probs=140.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++|++|||||+|+||.+++++|+++|++|++++|+.+...+..... .....+.++.+|+.++.            +.+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999654322211111 12356888999997752            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH------cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR------VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~------~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +|+||||||......    ..++++..+++|+.|+.++++++..      .+. +||++||...+.              
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~--------------  167 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ--------------  167 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc--------------
Confidence            999999999765433    2234778899999999999998755      343 899999976542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCC-------CccHHHHHHHHHHhCCCeEEec
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCID-------DGRVVSNFVAQALRKEPLTVYG  319 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  319 (340)
                        +......|+.+|++.+.+++.++.+   .|+++++++||.|.++.....       .......+...+.+..      
T Consensus       168 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  239 (279)
T 3sju_A          168 --GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI------  239 (279)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC------
T ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC------
Confidence              1122368999999999999999876   589999999999987531000       0000112222222222      


Q ss_pred             CCceeEccccHHHHHHHHHh
Q 019470          320 DGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       320 ~g~~~~~~v~v~Dva~a~~~  339 (340)
                         ....+..++|+|++++.
T Consensus       240 ---p~~r~~~pedvA~~v~~  256 (279)
T 3sju_A          240 ---PLGRYSTPEEVAGLVGY  256 (279)
T ss_dssp             ---TTSSCBCHHHHHHHHHH
T ss_pred             ---CCCCCCCHHHHHHHHHH
Confidence               23357889999998764

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.86  E-value=4e-21  Score=174.32  Aligned_cols=203  Identities=13%  Similarity=0.026  Sum_probs=143.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            357789999999999999999999999999999998754322211111 12346788889987752            23


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......     ..++++..+++|+.|+.++++++..    .+. +||++||...+..             
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  151 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA-------------  151 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB-------------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC-------------
Confidence            7999999999753211     2345788999999999999988743    333 8999999775421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                        +......|+.+|++.+.+++.++.+.   |+++++++||.|.++................+....+         ...
T Consensus       152 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r  220 (280)
T 3tox_A          152 --GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---------LKR  220 (280)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------TSS
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------cCC
Confidence              11223689999999999999998774   8999999999999985321000001122222222222         234


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +..++|+|++++.
T Consensus       221 ~~~pedvA~~v~~  233 (280)
T 3tox_A          221 IARPEEIAEAALY  233 (280)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            7889999998764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.86  E-value=2.3e-21  Score=179.16  Aligned_cols=165  Identities=18%  Similarity=0.091  Sum_probs=122.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++++||||||+|+||.+|+++|+++|++|++++|+.....+...   .......+.++.+|+.++.            
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999997543222111   1111236888999997752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc-----------CCeEEEEeCcccccCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~-----------~~~~i~~SS~~v~g~~~~~~~  242 (340)
                      +.++|+||||||......    ..++++..+++|+.|+.++++++...           +.+||++||...+..      
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~------  158 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA------  158 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC------
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC------
Confidence            236899999999754332    22357789999999999999887542           237999999775532      


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                                ......|+.||++.+.+.+.++.+   .|+++++++||.|.++.
T Consensus       159 ----------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  202 (319)
T 3ioy_A          159 ----------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI  202 (319)
T ss_dssp             ----------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence                      122267999999888888887755   48999999999998874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.86  E-value=2.1e-21  Score=172.05  Aligned_cols=194  Identities=14%  Similarity=0.047  Sum_probs=136.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +|+++||||+|+||++++++|+++|++|+++ +|+..... .....+  ...++.++.+|+.++.            +.+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAE-EVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH-HHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999995 66532221 111111  1246788889987642            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++.+.    +. +||++||...+...              
T Consensus        80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  145 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN--------------  145 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC--------------
T ss_pred             CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC--------------
Confidence            999999999764322    22356789999999999999888653    44 99999997543211              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                        .....|+.+|++.+.+++.++.+   .|+++++++||.++++....    +...+...+....+         ...++
T Consensus       146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~~~  210 (244)
T 1edo_A          146 --IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK----LGEDMEKKILGTIP---------LGRTG  210 (244)
T ss_dssp             --TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT----TCHHHHHHHHTSCT---------TCSCB
T ss_pred             --CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh----cChHHHHHHhhcCC---------CCCCC
Confidence              12267999999999999988876   48999999999998864211    11222222322221         23488


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|++++++.
T Consensus       211 ~~~dva~~~~~  221 (244)
T 1edo_A          211 QPENVAGLVEF  221 (244)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.86  E-value=5.9e-21  Score=173.49  Aligned_cols=198  Identities=11%  Similarity=-0.019  Sum_probs=139.4

Q ss_pred             CCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||+  |+||.+++++|+++|++|++++|+.. ..+...... ....+.++.+|+.++.            +
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999999753 111111100 0123577888887642            2


Q ss_pred             CCCCEEEEcccCCCC----C----CCcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASP----V----HYKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~----~----~~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      .++|+||||||....    .    ...++++..+++|+.|+.++++++...    +.+||++||...+..          
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------  167 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV----------  167 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB----------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC----------
Confidence            379999999997542    1    123357789999999999999998664    248999999765421          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                            ......|+.+|++.+.+++.++.+.   |+++++++||.|+++....  ......+...+.+..++        
T Consensus       168 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~p~--------  231 (285)
T 2p91_A          168 ------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS--ITGFHLLMEHTTKVNPF--------  231 (285)
T ss_dssp             ------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC----CTTHHHHHHHHHHHSTT--------
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc--ccchHHHHHHHHhcCCC--------
Confidence                  1123679999999999999988764   8999999999999985321  11112233333332221        


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                       ..+.+++|+|++++.
T Consensus       232 -~~~~~~~dva~~~~~  246 (285)
T 2p91_A          232 -GKPITIEDVGDTAVF  246 (285)
T ss_dssp             -SSCCCHHHHHHHHHH
T ss_pred             -CCCcCHHHHHHHHHH
Confidence             236789999998764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=1.2e-20  Score=167.73  Aligned_cols=193  Identities=16%  Similarity=0.112  Sum_probs=138.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+ ....+   .+.++.+|+.++.            +.+
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE-AAEAV---GAHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc---CCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999986432221 11111   2677888887642            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++...    +. +||++||...++..              
T Consensus        78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------  143 (245)
T 1uls_A           78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL--------------  143 (245)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT--------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC--------------
Confidence            899999999754322    22357789999999999999888553    43 89999997744321              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                         ....|+.+|++.+.+++.++.+   .|+++++++||.|.++....    +.......+....+.         ..++
T Consensus       144 ---~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~p~---------~~~~  207 (245)
T 1uls_A          144 ---GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK----VPEKVREKAIAATPL---------GRAG  207 (245)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS----SCHHHHHHHHHTCTT---------CSCB
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh----cCHHHHHHHHhhCCC---------CCCc
Confidence               1267999999999999998876   48999999999998874311    111222233332221         1378


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       208 ~~~dvA~~v~~  218 (245)
T 1uls_A          208 KPLEVAYAALF  218 (245)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            89999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.86  E-value=5.1e-21  Score=172.37  Aligned_cols=200  Identities=18%  Similarity=0.103  Sum_probs=139.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      ..+++|++|||||+|+||++++++|+++|++|++++|+.....+.....  ....++.++.+|+.++.            
T Consensus        17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4577889999999999999999999999999999999643322111100  01245778889987742            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|+||||||......    ..++++..+++|+.|+.++++++.    +.+ .+||++||..+..             
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-------------  163 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE-------------  163 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC-------------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhc-------------
Confidence            237999999999754332    123467899999999999988874    334 3899999976210             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHH--HHHHHHHHhCCCeEEecCCce
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~  323 (340)
                        .+......|+.+|++.+.+++.++.+   .|+++++++||.+.++...    ...  ......+.+..+.        
T Consensus       164 --~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~p~--------  229 (267)
T 1vl8_A          164 --VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE----AVFSDPEKLDYMLKRIPL--------  229 (267)
T ss_dssp             --CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH----HHHTCHHHHHHHHHTCTT--------
T ss_pred             --cCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc----ccccChHHHHHHHhhCCC--------
Confidence              11122368999999999999998876   4899999999999886421    111  1222223332221        


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                       ..++.++|+|++++.
T Consensus       230 -~~~~~p~dvA~~v~~  244 (267)
T 1vl8_A          230 -GRTGVPEDLKGVAVF  244 (267)
T ss_dssp             -SSCBCGGGGHHHHHH
T ss_pred             -CCCcCHHHHHHHHHH
Confidence             236788899888764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.86  E-value=2.6e-21  Score=174.27  Aligned_cols=197  Identities=11%  Similarity=0.019  Sum_probs=138.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+.. ..+ ..++.++.+|+.++.            +.
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIA-ADL-GKDVFVFSANLSDRKSIKQLAEVAEREME  100 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH-CSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHh-CCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            3578899999999999999999999999999999998654322221 111 246888999997752            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..+++++.+++|+.|+.++++++    ++.+. +||++||...+..              
T Consensus       101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~--------------  166 (266)
T 3grp_A          101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG--------------  166 (266)
T ss_dssp             SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC--------------
Confidence            7999999999764332    23457889999999977777765    33444 9999999764421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|.++....    ........+.+..+         ...+
T Consensus       167 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~p---------~~r~  231 (266)
T 3grp_A          167 --NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK----LNEKQKEAIMAMIP---------MKRM  231 (266)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT----CCHHHHHHHHTTCT---------TCSC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc----cCHHHHHHHHhcCC---------CCCC
Confidence              122368999999999999999876   48999999999998863211    11223333333322         2347


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|+|++++.
T Consensus       232 ~~~edvA~~v~~  243 (266)
T 3grp_A          232 GIGEEIAFATVY  243 (266)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            789999998764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=6.7e-21  Score=168.89  Aligned_cols=168  Identities=11%  Similarity=-0.042  Sum_probs=123.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----cC--------
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LL--------  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~--------  179 (340)
                      ++++|+||||+|+||.+++++|+++|  ++|++++|+.....+ +... ...++.++.+|+.++.     +.        
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            46799999999999999999999999  999999997544322 2111 2457889999987642     11        


Q ss_pred             -CCCEEEEcccCCC-CCC----CcCChhhHHHHHHHHHHHHHHHHHHc----------------CCeEEEEeCcccccCC
Q 019470          180 -EVDQIYHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----------------GARFLLTSTSEVYGDP  237 (340)
Q Consensus       180 -~~D~Vih~Ag~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----------------~~~~i~~SS~~v~g~~  237 (340)
                       ++|+||||||... ...    ..++++..+++|+.++.++++++...                ..+||++||...+...
T Consensus        80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence             7999999999764 111    22346789999999999998887542                3489999997654321


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      ..    +.     .+..+...|+.+|++.+.+++.++.+.   |+++++++||.|.++.
T Consensus       160 ~~----~~-----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  209 (250)
T 1yo6_A          160 NT----SG-----SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL  209 (250)
T ss_dssp             CC----ST-----TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred             cc----cc-----cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence            10    00     111334689999999999999998764   8999999999998764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.86  E-value=7.1e-21  Score=171.26  Aligned_cols=202  Identities=13%  Similarity=0.036  Sum_probs=141.4

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc--------
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL--------  177 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~--------  177 (340)
                      +....++++|+|+||||+|+||.+++++|+++|++|+++++......+.....+  ...++.++.+|+.++.        
T Consensus        18 ~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           18 LYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             -------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            333445678899999999999999999999999999887654332222211111  2357888999997742        


Q ss_pred             ----cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH-----HcC-CeEEEEeCcccccCCCCCCCC
Q 019470          178 ----LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSEVYGDPLQHPQK  243 (340)
Q Consensus       178 ----~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~-----~~~-~~~i~~SS~~v~g~~~~~~~~  243 (340)
                          +.++|+||||||......    ..++++..+++|+.++.++++++.     +.+ .+||++||...+..       
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  170 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG-------  170 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC-------
T ss_pred             HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC-------
Confidence                237999999999765433    234577899999999999999873     334 49999999664421       


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecC
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                               ......|+.+|++.+.+++.++.+.   |+++++++||.|.++.....     ........+..+.     
T Consensus       171 ---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~p~-----  231 (267)
T 4iiu_A          171 ---------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----ESALKEAMSMIPM-----  231 (267)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----HHHHHHHHHTCTT-----
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----HHHHHHHHhcCCC-----
Confidence                     1223689999999999999888764   89999999999998754211     3334444443322     


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                          ..+..++|++++++.
T Consensus       232 ----~~~~~~edva~~~~~  246 (267)
T 4iiu_A          232 ----KRMGQAEEVAGLASY  246 (267)
T ss_dssp             ----CSCBCHHHHHHHHHH
T ss_pred             ----CCCcCHHHHHHHHHH
Confidence                247789999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.86  E-value=7.1e-21  Score=169.99  Aligned_cols=197  Identities=8%  Similarity=-0.032  Sum_probs=130.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----c------CC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----L------LE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~------~~  180 (340)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.     +      .+
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            457789999999999999999999999999999999755433221111 12357888999997752     1      36


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+.                
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  147 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR----------------  147 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC----------------
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC----------------
Confidence            899999999765432    22357789999999999998877    33443 899999976542                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcE-EEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEV-RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~-~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                      +......|+.+|++.+.+++.++.+   .|+++ +++.||.|..+...        .......     ..+....... +
T Consensus       148 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~--------~~~~~~~-----~~~~~~~~~~-~  213 (252)
T 3h7a_A          148 GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVR--------ERREQMF-----GKDALANPDL-L  213 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------------
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhh--------ccchhhh-----hhhhhcCCcc-C
Confidence            1122368999999999999999876   48999 89999999776421        1111110     0111112234 8


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ..++|+|++++.
T Consensus       214 ~~pedvA~~~~~  225 (252)
T 3h7a_A          214 MPPAAVAGAYWQ  225 (252)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            899999999864

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.86  E-value=1.6e-21  Score=172.71  Aligned_cols=193  Identities=12%  Similarity=0.063  Sum_probs=133.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCccccccccc--CCCceEE-eeCcccccc------------cC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHF--GNPNFEL-IRHDVVEPL------------LL  179 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~--~~~~~~~-~~~D~~~~~------------~~  179 (340)
                      +|+++||||+|+||.+++++|+++|++|+++ +|+.+...+ ....+  ...++.. +.+|+.+..            +.
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEE-VAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHH-HHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999999998 665332211 11111  1224455 788887642            24


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccc-cCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVY-GDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~-g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||...+ +.             
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------  146 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-------------  146 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-------------
Confidence            7999999999754322    22356788999999966665544    45564 99999997543 32             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                          .....|+.+|++.+.+++.++.+.   |++++++|||.++++....    ....+...+.+..+         ...
T Consensus       147 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~  209 (245)
T 2ph3_A          147 ----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER----LPQEVKEAYLKQIP---------AGR  209 (245)
T ss_dssp             ----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----SCHHHHHHHHHTCT---------TCS
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh----cCHHHHHHHHhcCC---------CCC
Confidence                112679999999999999988764   8999999999998874211    11222233333222         235


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|+|++++.
T Consensus       210 ~~~~~dva~~~~~  222 (245)
T 2ph3_A          210 FGRPEEVAEAVAF  222 (245)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            8899999998764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.86  E-value=1.3e-20  Score=166.85  Aligned_cols=190  Identities=14%  Similarity=0.096  Sum_probs=136.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----------cCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~~D~V  184 (340)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.    ..+.+   .+..+.+|+.+..           +.++|++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----AAQSL---GAVPLPTDLEKDDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH----HHHHH---TCEEEECCTTTSCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHhh---CcEEEecCCchHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999999997543    11112   2567777876521           2369999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      |||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+....              ..+
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~  140 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--------------PVP  140 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------TSC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--------------CCC
Confidence            99999754322    233578899999999999988873    3454 999999987664210              022


Q ss_pred             CChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHH--HHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          256 RSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      ...|+.+|++.+.+++.++.+.   |+++++++||.+.++...    ...  ..+...+....+         ...+..+
T Consensus       141 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~p---------~~~~~~~  207 (239)
T 2ekp_A          141 IPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL----PLRQNPELYEPITARIP---------MGRWARP  207 (239)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHTCHHHHHHHHTTCT---------TSSCBCH
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh----ccccCHHHHHHHHhcCC---------CCCCcCH
Confidence            3689999999999999998764   899999999999887421    000  122222222211         1247899


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|+|++++.
T Consensus       208 ~dvA~~~~~  216 (239)
T 2ekp_A          208 EEIARVAAV  216 (239)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.86  E-value=2.4e-21  Score=176.94  Aligned_cols=166  Identities=16%  Similarity=0.078  Sum_probs=128.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-ccccccc--cCCCceEEeeCcccccc-----------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHH--FGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~--~~~~~~~~~~~D~~~~~-----------  177 (340)
                      .++++|++|||||+|+||.+++++|+++|++|++++|..... .+.....  ....++.++.+|+.++.           
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999998863221 1111111  12356788889987742           


Q ss_pred             -cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       +.++|++|||||......     ..++++..+++|+.|+.++++++...-   .+||++||...+..            
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~------------  192 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP------------  192 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC------------
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC------------
Confidence             247999999999754221     234578899999999999999997653   38999999876632            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                          ......|+.+|++.+.+++.++.+.   |+++++++||.|+++.
T Consensus       193 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  236 (294)
T 3r3s_A          193 ----SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL  236 (294)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence                1223679999999999999998775   8999999999998863

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.86  E-value=4e-21  Score=173.32  Aligned_cols=199  Identities=8%  Similarity=-0.003  Sum_probs=141.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++|+|+||||+|+||.+++++|+++|++|++++|+.....+.+...+  ...++.++.+|+.++.            
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            45678899999999999999999999999999999996443322222211  2347888999997742            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      ..++|+||||||......    ..+++++.+++|+.++.++++++..    .+. +||++||...+..            
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  172 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG------------  172 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC------------
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC------------
Confidence            137999999999765433    2235778999999999998887743    343 8999999665421            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                          ......|+.+|++.+.+++.++.+   .++++++++||.|.++...    .....+.         ..+.......
T Consensus       173 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~---------~~~~~~~~~~  235 (271)
T 4iin_A          173 ----NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA----NLKDELK---------ADYVKNIPLN  235 (271)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------------CGGGCTTC
T ss_pred             ----CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh----hhcHHHH---------HHHHhcCCcC
Confidence                122368999999999999999876   5899999999999876421    1111111         1111222334


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+.+++|+|++++.
T Consensus       236 ~~~~p~dvA~~i~~  249 (271)
T 4iin_A          236 RLGSAKEVAEAVAF  249 (271)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            58899999998864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.86  E-value=6e-21  Score=172.73  Aligned_cols=207  Identities=18%  Similarity=0.091  Sum_probs=142.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC---------ccccc---ccc--cCCCceEEeeCcccccc-
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---------RKENV---MHH--FGNPNFELIRHDVVEPL-  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~---------~~~~~---~~~--~~~~~~~~~~~D~~~~~-  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|....         ..+.+   ...  ....++.++.+|+.+.. 
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4678899999999999999999999999999999984221         11111   111  12356788889997742 


Q ss_pred             -----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccC
Q 019470          178 -----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGD  236 (340)
Q Consensus       178 -----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~  236 (340)
                                 +.++|++|||||......    ..++++..+++|+.++.++++++.    +.+  .+||++||...+..
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence                       246999999999865433    234578899999999999988863    333  38999999775421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCC
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKE  313 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~  313 (340)
                                      ......|+.+|++.+.+++.++.+.   |+++++++||.|.++..   ................
T Consensus       168 ----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~  228 (277)
T 3tsc_A          168 ----------------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG---SGDMVTAVGQAMETNP  228 (277)
T ss_dssp             ----------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG---SHHHHHHHHHHHHTCG
T ss_pred             ----------------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc---cchhhhhhhhcccccH
Confidence                            1223679999999999999998764   89999999999988742   1111122222111111


Q ss_pred             Ce-EEecCCceeEccccHHHHHHHHHh
Q 019470          314 PL-TVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       314 ~~-~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .. ..+...... .+.+++|+|++++.
T Consensus       229 ~~~~~~~~~~p~-r~~~pedvA~~v~~  254 (277)
T 3tsc_A          229 QLSHVLTPFLPD-WVAEPEDIADTVCW  254 (277)
T ss_dssp             GGTTTTCCSSSC-SCBCHHHHHHHHHH
T ss_pred             HHHHHhhhccCC-CCCCHHHHHHHHHH
Confidence            10 111111122 48899999999864

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=2.9e-21  Score=173.60  Aligned_cols=194  Identities=20%  Similarity=0.154  Sum_probs=141.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +++|+++||||+|+||.+++++|+++|++|++++|+.+...+. ...+. .++.++.+|+.++.            +.++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA-VAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999999999999999999999999999999975332221 11222 46788889987742            2368


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |+||||||......    ..++++..+++|+.++.++++++...   +.+||++||...++.+                 
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------------  144 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF-----------------  144 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH-----------------
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC-----------------
Confidence            99999999754322    22346788999999999999998764   3489999998765211                 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|++.+.+++.++.+   .|+++++++||.|.++....    +...+...+.+..+.         ..+.+++
T Consensus       145 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~p~---------~~~~~p~  211 (263)
T 2a4k_A          145 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG----LPPWAWEQEVGASPL---------GRAGRPE  211 (263)
T ss_dssp             HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT----SCHHHHHHHHHTSTT---------CSCBCHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh----cCHHHHHHHHhcCCC---------CCCcCHH
Confidence            1257999999999999998876   38999999999999875321    112222333332221         2378899


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+|++++.
T Consensus       212 dvA~~v~~  219 (263)
T 2a4k_A          212 EVAQAALF  219 (263)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.86  E-value=1.5e-21  Score=176.23  Aligned_cols=199  Identities=15%  Similarity=0.089  Sum_probs=142.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            +
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4678899999999999999999999999999999998654332221111 12346788889987742            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.|+.++++++..    .+. +||++||...+.              
T Consensus       102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~--------------  167 (271)
T 4ibo_A          102 IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL--------------  167 (271)
T ss_dssp             CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC--------------
Confidence            36999999999764433    2345778999999999999887644    343 899999966431              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHH--HHHHHHHHhCCCeEEecCCcee
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                        +......|+.+|++.+.+++.++.+   .|+++++++||.|.++...    ...  ..+...+....+.         
T Consensus       168 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~p~---------  232 (271)
T 4ibo_A          168 --ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ----ALIDNPEFDAWVKARTPA---------  232 (271)
T ss_dssp             --BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHHCHHHHHHHHHHSTT---------
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh----hcccCHHHHHHHHhcCCC---------
Confidence              1122368999999999999999876   5899999999999887421    111  1223333333222         


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+..++|++++++.
T Consensus       233 ~r~~~pedva~~v~~  247 (271)
T 4ibo_A          233 KRWGKPQELVGTAVF  247 (271)
T ss_dssp             CSCBCGGGGHHHHHH
T ss_pred             CCCcCHHHHHHHHHH
Confidence            236678888888754

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.86  E-value=3.5e-21  Score=173.96  Aligned_cols=195  Identities=17%  Similarity=0.122  Sum_probs=131.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+... .+ ..++.++.+|+.++.            +.+
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  102 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA-EI-GDDALCVPTDVTDPDSVRALFTATVEKFGR  102 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-TSCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999999999999999999996543222211 11 246788899987742            237


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cC---CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~---~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +|+||||||......     ..++++..+++|+.|+.++++++..    .+   .+||++||...+.             
T Consensus       103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-------------  169 (272)
T 4dyv_A          103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS-------------  169 (272)
T ss_dssp             CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-------------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-------------
Confidence            999999999754321     2335788999999999888887643    33   3899999976542             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         +......|+.+|++.+.+++.++.+   .|+++++++||.|..+...        .+......    . . ......
T Consensus       170 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~--------~~~~~~~~----~-~-~~~~~~  232 (272)
T 4dyv_A          170 ---PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQ--------KMKAGVPQ----A-D-LSIKVE  232 (272)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhh--------hhcccchh----h-h-hccccc
Confidence               1223368999999999999999876   4899999999999876421        11110000    0 0 011223


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+..++|+|++++.
T Consensus       233 ~~~~pedvA~~v~f  246 (272)
T 4dyv_A          233 PVMDVAHVASAVVY  246 (272)
T ss_dssp             ---CHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
Confidence            47899999999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.86  E-value=2.1e-21  Score=170.11  Aligned_cols=188  Identities=14%  Similarity=0.007  Sum_probs=134.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc---ccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~D~Vih~Ag  189 (340)
                      .+++|+++||||+|+||++++++|+++|++|++++|+..              +|+.+.+..+.   .+.++|++|||||
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            356789999999999999999999999999999998543              12222111111   2347999999999


Q ss_pred             CCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          190 PASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       190 ~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      ......     ..++++..+++|+.++.++++++...-   .+||++||...+..                ......|+.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------------~~~~~~Y~a  132 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV----------------VANTYVKAA  132 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC----------------CTTCHHHHH
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC----------------CCCchHHHH
Confidence            752221     233577889999999999999997652   38999999775522                223368999


Q ss_pred             HHHHHHHHHHHHHHhhC-CcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          262 GKRTAETLTMDYHRGAG-VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~g-i~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|++.+.+++.++.+.+ +++++++||.+.++............+.....+..+         ...+.+++|+|++++.
T Consensus       133 sK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~  202 (223)
T 3uce_A          133 INAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP---------VGKVGEASDIAMAYLF  202 (223)
T ss_dssp             HHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST---------TCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC---------CCCccCHHHHHHHHHH
Confidence            99999999999998865 999999999999875322122222333333333322         2347889999998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.86  E-value=1.1e-21  Score=174.45  Aligned_cols=199  Identities=14%  Similarity=0.080  Sum_probs=137.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+.........++.++.+|+.++.            +.+
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            45678999999999999999999999999999999964332211111111246888999987642            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++    ++.+  .+||++||...+...             
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  149 (251)
T 1zk4_A           83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-------------  149 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-------------
Confidence            999999999754322    22346789999999888776665    3444  389999998765321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHH-----hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHR-----GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~-----~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         .....|+.+|++.|.+++.++.     ..+++++++|||.++++......    ........        .......
T Consensus       150 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~----~~~~~~~~--------~~~~~~~  214 (251)
T 1zk4_A          150 ---PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP----GAEEAMSQ--------RTKTPMG  214 (251)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST----THHHHHTS--------TTTCTTS
T ss_pred             ---CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC----chhhhHHH--------hhcCCCC
Confidence               2236899999999999988875     34899999999999987421100    00010000        0111223


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+++++|++++++.
T Consensus       215 ~~~~~~dva~~~~~  228 (251)
T 1zk4_A          215 HIGEPNDIAYICVY  228 (251)
T ss_dssp             SCBCHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            58899999998864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.86  E-value=9e-21  Score=172.09  Aligned_cols=166  Identities=17%  Similarity=0.095  Sum_probs=127.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +.+++|++|||||+|+||.+++++|+++|++|++++|+.....+.....+  ...++.++.+|+.+..            
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999987533212111111  1346788889987642            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc--C-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV--G-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~--~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +.++|+||||||......    ..++++..+++|+.|+.++++++...  + .+||++||...+...             
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------------  171 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA-------------  171 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-------------
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC-------------
Confidence            236999999999764332    23457789999999999999999875  3 499999997644210             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|.++
T Consensus       172 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  214 (283)
T 1g0o_A          172 --VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  214 (283)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence              011368999999999999998865   4899999999999886

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.86  E-value=7.2e-21  Score=168.63  Aligned_cols=185  Identities=12%  Similarity=0.045  Sum_probs=136.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCCccccccccc--CCCceEEeeCcccccc---------
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~---------  177 (340)
                      +|+|+||||+|+||.+++++|+++|+       +|++++|+...... +...+  ...++.++.+|+.++.         
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEK-ISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHH-HHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHH-HHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            56899999999999999999999999       99999986432211 11111  1346788999997742         


Q ss_pred             ---cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCC
Q 019470          178 ---LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ---~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                         +.++|+||||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+..         
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------  151 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA---------  151 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCC---------
Confidence               236999999999754322    2235778999999999999988743    344 9999999876532         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                             ..+...|+.+|++.|.+++.++.+   .|++++++|||.++++.......             .        .
T Consensus       152 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~--------~  203 (244)
T 2bd0_A          152 -------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------------E--------M  203 (244)
T ss_dssp             -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------------T--------T
T ss_pred             -------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------------c--------c
Confidence                   123368999999999999888764   58999999999999985321000             0        0


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                       ...+++++|+|++++.
T Consensus       204 -~~~~~~~~dva~~~~~  219 (244)
T 2bd0_A          204 -QALMMMPEDIAAPVVQ  219 (244)
T ss_dssp             -GGGSBCHHHHHHHHHH
T ss_pred             -cccCCCHHHHHHHHHH
Confidence             1257889999988764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.86  E-value=2.8e-21  Score=172.97  Aligned_cols=196  Identities=17%  Similarity=0.163  Sum_probs=137.1

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----------cC
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LL  179 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~  179 (340)
                      .+++++|++|||||+|+||.+++++|+++|++|++++|..+...+    .+ ..++.++.+|+.++.           +.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA----DL-GDRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH----HT-CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH----hc-CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            356788999999999999999999999999999999984322111    11 346788899987642           23


Q ss_pred             CCCEEEEcccCCCCC--------CCcCChhhHHHHHHHHHHHHHHHHHHc------------C-CeEEEEeCcccccCCC
Q 019470          180 EVDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKRV------------G-ARFLLTSTSEVYGDPL  238 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~~a~~~------------~-~~~i~~SS~~v~g~~~  238 (340)
                      ++|++|||||.....        ...++++..+++|+.++.++++++...            + .+||++||...+..  
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  156 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG--  156 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC--
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC--
Confidence            799999999964321        233457889999999999999988642            2 27999999765421  


Q ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCe
Q 019470          239 QHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPL  315 (340)
Q Consensus       239 ~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  315 (340)
                                    ......|+.+|++.+.+++.++.+   .|+++++++||.|..+...    .........+.+..+.
T Consensus       157 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~  218 (257)
T 3tl3_A          157 --------------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLA----SLPEEARASLGKQVPH  218 (257)
T ss_dssp             --------------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-------CHHHHHHHHHTSSS
T ss_pred             --------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhh----hccHHHHHHHHhcCCC
Confidence                          112357999999999999998876   4899999999999887531    1112233333332221


Q ss_pred             EEecCCceeEccccHHHHHHHHHh
Q 019470          316 TVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       316 ~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                              ...+.+++|++++++.
T Consensus       219 --------~~r~~~p~dva~~v~~  234 (257)
T 3tl3_A          219 --------PSRLGNPDEYGALAVH  234 (257)
T ss_dssp             --------SCSCBCHHHHHHHHHH
T ss_pred             --------CCCccCHHHHHHHHHH
Confidence                    1347889999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.86  E-value=5.8e-21  Score=172.64  Aligned_cols=198  Identities=13%  Similarity=-0.017  Sum_probs=140.3

Q ss_pred             CCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||+  |+||.+++++|+++|++|++++|+.. ..+...... ....+.++.+|+.++.            +
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            567899999999  99999999999999999999999764 211111110 0123677888887642            2


Q ss_pred             CCCCEEEEcccCCCC--------CCCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASP--------VHYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~--------~~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|+||||||....        ....++++..+++|+.++.++++++...   +.+||++||...+..           
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------  151 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------  151 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-----------
Confidence            368999999997542        1123457789999999999999999775   348999999664421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                           ......|+.+|++.+.+++.++.+.   |+++++++||.|.++.....  .....+...+.+..++         
T Consensus       152 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~p~---------  215 (275)
T 2pd4_A          152 -----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI--ADFRMILKWNEINAPL---------  215 (275)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS--TTHHHHHHHHHHHSTT---------
T ss_pred             -----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc--cccHHHHHHHHhcCCc---------
Confidence                 1223679999999999999998765   89999999999998753211  1112233333332221         


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+.+++|+|++++.
T Consensus       216 ~~~~~p~dva~~~~~  230 (275)
T 2pd4_A          216 RKNVSLEEVGNAGMY  230 (275)
T ss_dssp             SSCCCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            136688999998764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.85  E-value=2.1e-21  Score=175.20  Aligned_cols=198  Identities=12%  Similarity=-0.013  Sum_probs=140.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.....+..... ....++..+.+|+.+..            +.
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            467889999999999999999999999999999999654322211110 01235677888887642            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.|+.++++++..    .+ .+||++||...+..              
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  170 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG--------------  170 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC--------------
Confidence            7999999999764432    2345788999999999999998742    33 38999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|.++...    .+.......+....         ....+
T Consensus       171 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~---------p~~r~  235 (270)
T 3ftp_A          171 --NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK----GLPQEQQTALKTQI---------PLGRL  235 (270)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH----HSCHHHHHHHHTTC---------TTCSC
T ss_pred             --CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh----hcCHHHHHHHHhcC---------CCCCC
Confidence              122368999999999999999876   4899999999999876311    00111222222222         23457


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      .+++|+|++++.
T Consensus       236 ~~pedvA~~v~~  247 (270)
T 3ftp_A          236 GSPEDIAHAVAF  247 (270)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            899999998764

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.85  E-value=7e-21  Score=172.35  Aligned_cols=201  Identities=10%  Similarity=0.041  Sum_probs=142.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+...+.  ....++.++.+|+.++.            +
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999754322221111  11346888999997752            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++..    .+ .+||++||...+..             
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  170 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-------------  170 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-------------
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-------------
Confidence            37999999999654332    2345788999999999999998743    22 48999999765421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|++.+.+++.++.+.   |+++++++||.|.++........ ............++         ..
T Consensus       171 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~p~---------~r  237 (277)
T 4fc7_A          171 ---QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG-PQASLSTKVTASPL---------QR  237 (277)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC-CHHHHHHHHHTSTT---------SS
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC-CHHHHHHHhccCCC---------CC
Confidence               1223689999999999999998764   89999999999988631000000 01223333333322         24


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +..++|++++++.
T Consensus       238 ~~~p~dvA~~v~f  250 (277)
T 4fc7_A          238 LGNKTEIAHSVLY  250 (277)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            7789999998764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.85  E-value=4.6e-21  Score=170.65  Aligned_cols=163  Identities=20%  Similarity=0.169  Sum_probs=126.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+...+... .+ ..++..+.+|+.++.            +.+
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA-SI-GKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HH-CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4678899999999999999999999999999999986543322221 11 346788889987742            237


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHH----HHHcC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGL----AKRVG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~----a~~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|++|||||......    ..+++++.+++|+.|+.+++++    +++.+  .+||++||...+..              
T Consensus        81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  146 (247)
T 3rwb_A           81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG--------------  146 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT--------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC--------------
Confidence            999999999764333    2235778999999999999888    44544  38999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        ......|+.+|++.+.+++.++.+   +|+++++++||.|.++.
T Consensus       147 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~  190 (247)
T 3rwb_A          147 --TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDG  190 (247)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence              122368999999999999999877   58999999999998763

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.85  E-value=2.4e-20  Score=166.73  Aligned_cols=188  Identities=13%  Similarity=0.094  Sum_probs=133.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+..          ..+.++.+|+.++.            +.+
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------EGFLAVKCDITDTEQVEQAYKEIEETHGP   87 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------ccceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999999999999999999999999999964322          12567788887642            235


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+..               
T Consensus        88 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------  152 (253)
T 2nm0_A           88 VEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG---------------  152 (253)
T ss_dssp             CSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC---------------
Confidence            899999999754322    3456889999999999999987743    344 8999999764421               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+.   |+++++++||.|.++...    .+.......+.+..         ....++
T Consensus       153 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~---------p~~~~~  218 (253)
T 2nm0_A          153 -SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK----VLTDEQRANIVSQV---------PLGRYA  218 (253)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------CHHHHHTTC---------TTCSCB
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchh----hcCHHHHHHHHhcC---------CCCCCc
Confidence             0112579999999999999988764   799999999999776421    01011111122211         112478


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      ..+|+|++++.
T Consensus       219 ~p~dvA~~i~~  229 (253)
T 2nm0_A          219 RPEEIAATVRF  229 (253)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.85  E-value=7.1e-21  Score=171.20  Aligned_cols=200  Identities=12%  Similarity=-0.040  Sum_probs=140.3

Q ss_pred             CCCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----------
Q 019470          112 LKRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----------  177 (340)
                      ...++|+||||||+  |+||.+++++|+++|++|++++|+.... +..... .....+.++.+|+.+..           
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            36788899999999  9999999999999999999999973221 111111 01134778889987742           


Q ss_pred             -cCCCCEEEEcccCCCC----C-----CCcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----V-----HYKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~-----~~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                       +.++|++|||||....    .     ...+++...+++|+.++.++++++...   +.+||++||...+..        
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------  160 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA--------  160 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB--------
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC--------
Confidence             2368999999997543    1     223457789999999999999999765   238999999765421        


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                              ......|+.+|++.+.+++.++.+.   |+++++++||.|..+...  .......+...+.+..+.      
T Consensus       161 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~------  224 (271)
T 3ek2_A          161 --------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAAS--GIKSFGKILDFVESNSPL------  224 (271)
T ss_dssp             --------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----C--CCHHHHHHHHHHHHHSTT------
T ss_pred             --------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhh--cccchHHHHHHHHhcCCc------
Confidence                    1223689999999999999998764   899999999999887531  111123344444433322      


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                         ..+..++|+|++++.
T Consensus       225 ---~~~~~pedva~~i~~  239 (271)
T 3ek2_A          225 ---KRNVTIEQVGNAGAF  239 (271)
T ss_dssp             ---SSCCCHHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHH
Confidence               236788999998764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.85  E-value=7.6e-21  Score=169.03  Aligned_cols=197  Identities=17%  Similarity=0.090  Sum_probs=137.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|......+.....+  ...++.++.+|+.++.            +.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            457899999999999999999999999999999983222211111111  1246788889987742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.++.++++++.    +.+. +||++||...+...             
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  148 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-------------  148 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-------------
Confidence            7999999999754322    223577899999999887777653    4454 99999997644211             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .....|+.+|++.+.+.+.++.+   .|+++++++||.+.++........    ....+....+         ...+
T Consensus       149 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~p---------~~~~  212 (246)
T 2uvd_A          149 ---PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN----IKAEMLKLIP---------AAQF  212 (246)
T ss_dssp             ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT----HHHHHHHTCT---------TCSC
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH----HHHHHHhcCC---------CCCC
Confidence               12267999999999999988765   489999999999988743211111    1122222221         1248


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ++++|+|++++.
T Consensus       213 ~~~~dvA~~~~~  224 (246)
T 2uvd_A          213 GEAQDIANAVTF  224 (246)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            899999998764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.85  E-value=1.7e-20  Score=170.52  Aligned_cols=166  Identities=20%  Similarity=0.118  Sum_probs=127.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc------------cccc---ccc--cCCCceEEeeCcccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR------------KENV---MHH--FGNPNFELIRHDVVE  175 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~------------~~~~---~~~--~~~~~~~~~~~D~~~  175 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+..            .+.+   ...  ....++.++.+|+.+
T Consensus         8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   87 (286)
T 3uve_A            8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD   87 (286)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence            46789999999999999999999999999999999873211            1111   111  123468888999977


Q ss_pred             cc------------cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcc
Q 019470          176 PL------------LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSE  232 (340)
Q Consensus       176 ~~------------~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~  232 (340)
                      +.            +.++|++|||||......     ..++++..+++|+.++.++++++...    +  .+||++||..
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            42            237999999999765432     23457789999999999999887432    3  3899999977


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCC
Q 019470          233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       233 v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~  294 (340)
                      .+..                ......|+.+|++.+.+++.++.+   +|+++++++||.|..+..
T Consensus       168 ~~~~----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~  216 (286)
T 3uve_A          168 GLKA----------------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPML  216 (286)
T ss_dssp             GTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTT
T ss_pred             hccC----------------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcc
Confidence            5521                122368999999999999999876   589999999999998753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=7.4e-21  Score=172.40  Aligned_cols=165  Identities=15%  Similarity=0.026  Sum_probs=125.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCC---ceEEeeCcccccc------------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNP---NFELIRHDVVEPL------------  177 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~---~~~~~~~D~~~~~------------  177 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+...... ...   ++.++.+|+.++.            
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            567899999999999999999999999999999996543222111110 112   6788999997742            


Q ss_pred             cCCCCEEEEcccCCCCCC--------CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~--------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                      +.++|+||||||......        ..++++..+++|+.++.++++++...    +.+||++||...+...        
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  155 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA--------  155 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--------
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC--------
Confidence            236999999999754322        22347789999999999999987642    3589999997765321        


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                             ......|+.+|++.+.+++.++.+   +|+++++++||.|+++.
T Consensus       156 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (280)
T 1xkq_A          156 -------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  199 (280)
T ss_dssp             -------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence                   012368999999999999998865   48999999999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.85  E-value=9.9e-21  Score=169.92  Aligned_cols=190  Identities=13%  Similarity=0.006  Sum_probs=133.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .++++++|||||+|+||.+++++|+++|++|++++|+.+...+..... .....+.++.+|+.+..            +.
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            467789999999999999999999999999999999754322211111 12356888999997742            23


Q ss_pred             CCCEEEEcccCCCCC-C----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~-~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||..... .    ..++++..+++|+.|+.++++++..    .+ .+||++||...+.              
T Consensus       106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  171 (262)
T 3rkr_A          106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN--------------  171 (262)
T ss_dssp             CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC--------------
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC--------------
Confidence            699999999973221 1    2235778999999999999988743    44 4899999976542              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                        +......|+.+|++.+.+++.++.+   .|+++++++||.|..+..        ..+.    .         ......
T Consensus       172 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~--------~~~~----~---------~~~~~~  228 (262)
T 3rkr_A          172 --PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG--------VGLS----A---------KKSALG  228 (262)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcc--------cccc----c---------cccccc
Confidence              2223368999999999999998876   589999999999976531        0000    0         012234


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      ++..+|+|++++.
T Consensus       229 ~~~p~dvA~~v~~  241 (262)
T 3rkr_A          229 AIEPDDIADVVAL  241 (262)
T ss_dssp             CCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            6789999998764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.85  E-value=7e-21  Score=170.76  Aligned_cols=191  Identities=16%  Similarity=0.096  Sum_probs=136.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c-------CC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L-------LE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~-------~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+. ...+. ..+.++.+|+.++.     +       .+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM-AAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35678999999999999999999999999999999965332211 11111 24778888987642     2       27


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+..               
T Consensus        82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  146 (260)
T 1nff_A           82 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG---------------  146 (260)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC---------------
Confidence            999999999754322    23357789999999997766654    44554 8999999876532               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+   .|+++++++||.++++....              ....+.    ......+.
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------~~~~~~----~~~~~~~~  207 (260)
T 1nff_A          147 -TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--------------VPEDIF----QTALGRAA  207 (260)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--------------SCTTCS----CCSSSSCB
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc--------------chhhHH----hCccCCCC
Confidence             112368999999999999998876   59999999999999975210              000000    11223578


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       208 ~~~dvA~~v~~  218 (260)
T 1nff_A          208 EPVEVSNLVVY  218 (260)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            88999988764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.85  E-value=1.5e-20  Score=167.80  Aligned_cols=161  Identities=17%  Similarity=0.126  Sum_probs=125.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCCC-cccccccccCCCceEEeeCccccc-c------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEP-L------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-~------------  177 (340)
                      ++++|+++||||+|+||.+++++|+++|++ |++++|+... ..+.+.......++.++.+|+.++ .            
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            456789999999999999999999999996 9999987532 111222222234678888998865 2            


Q ss_pred             cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc--------CCeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~--------~~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +.++|+||||||..    ..++++..+++|+.++.++++++...        +.+||++||...+..             
T Consensus        82 ~g~id~lv~~Ag~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  144 (254)
T 1sby_A           82 LKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-------------  144 (254)
T ss_dssp             HSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------------
T ss_pred             cCCCCEEEECCccC----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-------------
Confidence            13799999999964    34578899999999999999988642        237999999876532             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~  188 (254)
T 1sby_A          145 ---IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL  188 (254)
T ss_dssp             ---CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence               122368999999999999998875   69999999999998863

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.85  E-value=6.7e-21  Score=169.20  Aligned_cols=189  Identities=16%  Similarity=0.137  Sum_probs=120.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----------cCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLEV  181 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~~  181 (340)
                      .+++|++|||||+|+||.+++++|++ |+.|++++|+.....+. .   ...++..+.+|+.+..           +.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~-~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAAL-A---EIEGVEPIESDIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-H---TSTTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHH-H---hhcCCcceecccchHHHHHHHHHHHHhcCCC
Confidence            45678999999999999999999987 99999999864332211 1   1245788888876541           2369


Q ss_pred             CEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |+||||||.......    .++++..+++|+.++.++++++.    +.+.+||++||...+..                .
T Consensus        77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------------~  140 (245)
T 3e9n_A           77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP----------------H  140 (245)
T ss_dssp             SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC------------------------
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC----------------C
Confidence            999999997644332    23467889999999888888764    33468999999776532                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      .....|+.+|++.+.+++.++.+   .|+++++++||.|.++...        .+....         +.......++++
T Consensus       141 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------~~~~~~---------~~~~~~~~~~~p  203 (245)
T 3e9n_A          141 PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ--------GLMDSQ---------GTNFRPEIYIEP  203 (245)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------CCGGGSCH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh--------hhhhhh---------hcccccccCCCH
Confidence            22368999999999999999876   5899999999999887421        111100         011112358899


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|+|++++.
T Consensus       204 ~dvA~~i~~  212 (245)
T 3e9n_A          204 KEIANAIRF  212 (245)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998864

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.85  E-value=2.2e-20  Score=166.40  Aligned_cols=165  Identities=13%  Similarity=0.014  Sum_probs=126.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|+++||||+++||+++++.|+++|++|++++|+.+...+...+. ....++..+.+|+.++.            +.
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999754332221111 12356888999997752            34


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......     ..++|++.+++|+.|+.++.+++.    +.+. ++|++||.....              
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~--------------  149 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR--------------  149 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--------------
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC--------------
Confidence            7999999999654322     234688999999999998888763    3343 999999966431              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        +......|+.+|++...+.+.++.+   +|++++.|.||.|-.+.
T Consensus       150 --~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  194 (254)
T 4fn4_A          150 --GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI  194 (254)
T ss_dssp             --SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence              1112267999999999999999876   48999999999997763

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.85  E-value=5.3e-21  Score=170.84  Aligned_cols=198  Identities=17%  Similarity=0.092  Sum_probs=139.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ..++|+||||||+|+||.+++++|+++|++|+++++.............  ...++.++.+|+.+..            +
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4567899999999999999999999999999998854333322221111  2346788889987642            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||...+..             
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  156 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-------------  156 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-------------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-------------
Confidence            37899999999765332    22357789999999988887776    34454 8999999765421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|++.+.+++.++.+   .|+++++++||.|.++...    .....+...+.+..+         ...
T Consensus       157 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~~~---------~~~  220 (256)
T 3ezl_A          157 ---QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK----AIRPDVLEKIVATIP---------VRR  220 (256)
T ss_dssp             ---CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----TSCHHHHHHHHHHST---------TSS
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc----ccCHHHHHHHHhcCC---------CCC
Confidence               122368999999999999998876   4899999999999876321    111233333333322         224


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +.+++|++++++.
T Consensus       221 ~~~~~dva~~~~~  233 (256)
T 3ezl_A          221 LGSPDEIGSIVAW  233 (256)
T ss_dssp             CBCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            7789999998764

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.85  E-value=9.4e-21  Score=166.91  Aligned_cols=160  Identities=15%  Similarity=-0.007  Sum_probs=115.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      .+++|+||||+|+||++++++|+++|++|++++|+.....+ ....+  .++.++.+|+.+..            +.++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQA-LAAEL--EGALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHS--TTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh--hhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45689999999999999999999999999999996432221 11111  25778888887642            23789


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +||||||......    ..++++..+++|+.++.++++.+    ++.+. +||++||...+..                .
T Consensus        81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~  144 (234)
T 2ehd_A           81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP----------------F  144 (234)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC----------------C
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC----------------C
Confidence            9999999754322    22356789999999998666554    45554 8999999876531                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|++.+.+++.++.+   .|+++++++||.+.++.
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  187 (234)
T 2ehd_A          145 KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF  187 (234)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence            22368999999999999888765   48999999999997653

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.85  E-value=1.3e-21  Score=176.18  Aligned_cols=165  Identities=16%  Similarity=0.185  Sum_probs=125.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---ccccCCCceEEeeCcccccc--------cCC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEPL--------LLE  180 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~--------~~~  180 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+...+..   ........+..+.+|+.++.        +.+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~   85 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPK   85 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence            3567889999999999999999999999999999999754332211   11112346778888887642        347


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||.......    .+++++.+++|+.++.++++++.    +.+. +||++||...+.                
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  149 (267)
T 3t4x_A           86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM----------------  149 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc----------------
Confidence            9999999997654332    23567789999999888877664    3443 899999977552                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                      +......|+.+|++.+.+++.++.+.   |+++++++||.+.++
T Consensus       150 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  193 (267)
T 3t4x_A          150 PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE  193 (267)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence            12233789999999999999998764   799999999999775

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.85  E-value=1e-20  Score=171.31  Aligned_cols=200  Identities=18%  Similarity=0.027  Sum_probs=141.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.+...+...+. ....++.++.+|+.++.            +
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578899999999999999999999999999999999754432221111 12346788899997752            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++|||||......    ..++++..+++|+.++.++++++..    .+  .+||++||...+...           
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~-----------  176 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN-----------  176 (276)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC-----------
Confidence            37999999999765433    2235777889999999999988743    22  489999997644211           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                         .......|+.+|++.+.+++.++.+   .|+++++++||.|..+....    . ..+...+....+         ..
T Consensus       177 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~----~-~~~~~~~~~~~p---------~~  239 (276)
T 3r1i_A          177 ---IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP----L-ADYHALWEPKIP---------LG  239 (276)
T ss_dssp             ---CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG----G-GGGHHHHGGGST---------TS
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc----c-hHHHHHHHhcCC---------CC
Confidence               1112367999999999999999877   58999999999998875321    1 112222222222         12


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .+..++|+|++++.
T Consensus       240 r~~~pedvA~~v~f  253 (276)
T 3r1i_A          240 RMGRPEELTGLYLY  253 (276)
T ss_dssp             SCBCGGGSHHHHHH
T ss_pred             CCcCHHHHHHHHHH
Confidence            36778888887754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.85  E-value=9.3e-21  Score=169.87  Aligned_cols=200  Identities=13%  Similarity=0.023  Sum_probs=135.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|++|||||+|+||.+++++|+++|++|+++++......+.....+  ...++.++.+|+.++.            +
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4678899999999999999999999999999998554433222221111  2346788899997752            2


Q ss_pred             CCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|++|||||......     ..++++..+++|+.|+.++++++...-   .+||++||...+..              
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  150 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG--------------  150 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC--------------
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC--------------
Confidence            37999999999652221     223467899999999999999997753   38999999765511              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       +......|+.+|++.+.+++.++.+.  .++++++.||.|..+...        .+..    ......+........+.
T Consensus       151 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~--------~~~~----~~~~~~~~~~~p~~r~~  217 (259)
T 3edm_A          151 -GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHD--------TFTK----PEVRERVAGATSLKREG  217 (259)
T ss_dssp             -CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------------CCB
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccc--------cccC----hHHHHHHHhcCCCCCCc
Confidence             11122689999999999999998875  399999999999876421        1100    01111112223345688


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|++++++.
T Consensus       218 ~pedva~~v~~  228 (259)
T 3edm_A          218 SSEDVAGLVAF  228 (259)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998764

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.85  E-value=2.3e-20  Score=168.46  Aligned_cols=199  Identities=20%  Similarity=0.147  Sum_probs=143.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +.+++|++|||||+|+||.+++++|+++|++|++++++.....+.....+  ...++..+.+|+.++.            
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999776433222222111  2346788899997742            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +.++|++|||||......    ..+++++.+++|+.++.++++++...   +.+||++||.....               
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~---------------  171 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL---------------  171 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC---------------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc---------------
Confidence            237999999999764433    23357889999999999999998765   34899999954321               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                      .+......|+.+|++.+.+++.++.+.   |+++++++||.|.++.... .....    ....+..+.         ..+
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-~~~~~----~~~~~~~~~---------~r~  237 (271)
T 3v2g_A          172 VPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA-DGDHA----EAQRERIAT---------GSY  237 (271)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS-SCSSH----HHHHHTCTT---------SSC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc-cchhH----HHHHhcCCC---------CCC
Confidence            111223689999999999999998764   8999999999999875422 11121    222222221         236


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ..++|+|++++.
T Consensus       238 ~~pedvA~~v~f  249 (271)
T 3v2g_A          238 GEPQDIAGLVAW  249 (271)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            789999998764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.85  E-value=5.8e-21  Score=168.77  Aligned_cols=185  Identities=15%  Similarity=0.042  Sum_probs=132.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      .+|++|||||+|+||++++++|+++|++|++++|+.+...+.. ..+. .++.++.+|+.++.            +.++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE-LLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            4679999999999999999999999999999999754322211 1111 25888999997742            23689


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      ++|||||......    ..++++..+++|+.|+.++++++...    +.++|++||...+..                ..
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~  143 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG----------------KA  143 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS----------------CS
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC----------------CC
Confidence            9999999754322    33457889999999999999888432    238999999664421                12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|++.+.+++.++.+   .|+++++++||.|..+...        ...     .         .....++.++
T Consensus       144 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~--------~~~-----~---------~~~~~~~~pe  201 (235)
T 3l6e_A          144 NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWD--------NTD-----H---------VDPSGFMTPE  201 (235)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------------CBCHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchh--------ccC-----C---------CCCcCCCCHH
Confidence            2368999999999999999876   3899999999999776321        000     0         0112478899


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+|++++.
T Consensus       202 dvA~~v~~  209 (235)
T 3l6e_A          202 DAAAYMLD  209 (235)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.85  E-value=2e-20  Score=168.10  Aligned_cols=200  Identities=11%  Similarity=-0.021  Sum_probs=143.0

Q ss_pred             CCCCCeEEEEcCchH--HHHHHHHHHHhCCCeEEEEeCCCCCcc--cccccccCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGF--VGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~--IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~-----------  177 (340)
                      ++++|+++||||+|+  ||.+++++|+++|++|++++|+.....  ..+.......++.++.+|+.++.           
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            567889999999987  999999999999999999998743211  11112223336889999997752           


Q ss_pred             -cCCCCEEEEcccCCCC----CC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----VH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|++|||||....    ..    ..+++...+++|+.++.++++++...-   .+||++||...+..         
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------  154 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV---------  154 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC---------
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc---------
Confidence             2368999999997541    11    223467789999999999999997652   38999999765421         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                             ......|+.+|++.+.+++.++.+.   |+++++++||.|..+....  ......+...+.+..+.       
T Consensus       155 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~-------  218 (266)
T 3oig_A          155 -------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG--ISDFNSILKDIEERAPL-------  218 (266)
T ss_dssp             -------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT--CTTHHHHHHHHHHHSTT-------
T ss_pred             -------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc--ccchHHHHHHHHhcCCC-------
Confidence                   1223689999999999999998764   8999999999998864321  11112333333333222       


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                        ..+..++|+|++++.
T Consensus       219 --~~~~~p~dva~~v~~  233 (266)
T 3oig_A          219 --RRTTTPEEVGDTAAF  233 (266)
T ss_dssp             --SSCCCHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHH
Confidence              236788999998764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.85  E-value=4.6e-21  Score=169.30  Aligned_cols=179  Identities=11%  Similarity=0.076  Sum_probs=118.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .+.+|+||||||+|+||++|+++|+++| ++|++++|+.....+     +...+++++.+|+.++     .+.++|+|||
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----PYPTNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----SCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----cccCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            3456799999999999999999999999 899999997543222     2234788899998774     4678999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      |+|..       .       ....+.++++++++.++ +||++||..+|+........+..   ...    ..+...+..
T Consensus        95 ~a~~~-------~-------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~  153 (236)
T 3qvo_A           95 NLTGE-------D-------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNN---AVI----GEPLKPFRR  153 (236)
T ss_dssp             ECCST-------T-------HHHHHHHHHHHHHHTTCCEEEEECCCCC-----------------------CGGGHHHHH
T ss_pred             cCCCC-------c-------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchh---hcc----cchHHHHHH
Confidence            99741       1       11346789999999986 89999999998764332211110   011    223334444


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee-EccccHHHHHHHHHh
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT-RSFQFVSDLVRLTET  339 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~v~v~Dva~a~~~  339 (340)
                      +|..+    ++.+++++++|||.++++....                  ......+... ..+++++|+|++++.
T Consensus       154 ~~~~l----~~~gi~~~~vrPg~i~~~~~~~------------------~~~~~~~~~~~~~~i~~~DvA~~i~~  206 (236)
T 3qvo_A          154 AADAI----EASGLEYTILRPAWLTDEDIID------------------YELTSRNEPFKGTIVSRKSVAALITD  206 (236)
T ss_dssp             HHHHH----HTSCSEEEEEEECEEECCSCCC------------------CEEECTTSCCSCSEEEHHHHHHHHHH
T ss_pred             HHHHH----HHCCCCEEEEeCCcccCCCCcc------------------eEEeccCCCCCCcEECHHHHHHHHHH
Confidence            55544    4569999999999999974210                  1111122222 358999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.85  E-value=1.7e-20  Score=169.16  Aligned_cols=166  Identities=18%  Similarity=0.112  Sum_probs=128.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++++.....+.....+  ...++.++.+|+.++.            +
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999998875443322222111  2356888999997742            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      .++|++|||||......    ..++++..+++|+.|+.++++++...-   .+||++||.....               .
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------~  159 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---------------F  159 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---------------C
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---------------C
Confidence            37999999999764433    234578899999999999999987653   3899999965211               1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       160 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~  204 (270)
T 3is3_A          160 SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM  204 (270)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence            1223368999999999999999877   48999999999998874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.85  E-value=1e-20  Score=172.22  Aligned_cols=200  Identities=17%  Similarity=0.107  Sum_probs=138.5

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC-CCccccccccc---CCCceEEeeCcccc----cc--
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHF---GNPNFELIRHDVVE----PL--  177 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~-~~~~~~~~~~~---~~~~~~~~~~D~~~----~~--  177 (340)
                      .+...++++|+++||||+|+||.+++++|+++|++|++++|+. +... .....+   ...++.++.+|+.+    +.  
T Consensus        15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v   93 (288)
T 2x9g_A           15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAV-SLADELNKERSNTAVVCQADLTNSNVLPASC   93 (288)
T ss_dssp             -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHH-HHHHHHHHHSTTCEEEEECCCSCSTTHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHHHHhhcCCceEEEEeecCCccCCHHHH
Confidence            3344467889999999999999999999999999999999975 2221 111111   13467888899887    31  


Q ss_pred             ----------cCCCCEEEEcccCCCCCCC--------------cCChhhHHHHHHHHHHHHHHHHHHc----C-------
Q 019470          178 ----------LLEVDQIYHLACPASPVHY--------------KFNPVKTIKTNVVGTLNMLGLAKRV----G-------  222 (340)
Q Consensus       178 ----------~~~~D~Vih~Ag~~~~~~~--------------~~~~~~~~~~Nv~g~~~ll~~a~~~----~-------  222 (340)
                                +.++|+||||||.......              .++++..+++|+.++.++++++...    +       
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~  173 (288)
T 2x9g_A           94 EEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSN  173 (288)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCC
Confidence                      2379999999997543222              1246678999999999999887542    2       


Q ss_pred             CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCc
Q 019470          223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDG  299 (340)
Q Consensus       223 ~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~  299 (340)
                      .+||++||...+..                ......|+.+|++.+.+++.++.+.   |+++++++||.|+++. . .. 
T Consensus       174 g~iv~isS~~~~~~----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~-  234 (288)
T 2x9g_A          174 LSIVNLCDAMVDQP----------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG-  234 (288)
T ss_dssp             EEEEEECCTTTTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC-
T ss_pred             eEEEEEecccccCC----------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC-
Confidence            38999999775521                1223689999999999999988764   8999999999999885 2 11 


Q ss_pred             cHHHHHHHHHHhCCCeEEecCCceeEcc-ccHHHHHHHHHh
Q 019470          300 RVVSNFVAQALRKEPLTVYGDGKQTRSF-QFVSDLVRLTET  339 (340)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~-v~v~Dva~a~~~  339 (340)
                         ......+.+..+.         ..+ ..++|+|++++.
T Consensus       235 ---~~~~~~~~~~~p~---------~r~~~~pedvA~~v~~  263 (288)
T 2x9g_A          235 ---EEEKDKWRRKVPL---------GRREASAEQIADAVIF  263 (288)
T ss_dssp             ---HHHHHHHHHTCTT---------TSSCCCHHHHHHHHHH
T ss_pred             ---hHHHHHHHhhCCC---------CCCCCCHHHHHHHHHH
Confidence               1222333332221         124 688999998764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.85  E-value=2.1e-20  Score=166.79  Aligned_cols=180  Identities=14%  Similarity=0.099  Sum_probs=130.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      .+..+|+|+||||+|+||.+++++|+++|++|++++|+......           ..+..|+.+.            .+.
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----------HSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----------EEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----------cceEEEeCCHHHHHHHHHHHHHHcC
Confidence            34567899999999999999999999999999999997543321           1233444332            123


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+||||||......     ..++++..+++|+.++.++++++...-   .+||++||...+.                
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------------  150 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN----------------  150 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc----------------
Confidence            6899999999754322     234577899999999999999997652   3899999977552                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                      +......|+.+|++.+.+++.++.+     .++++++++||.|.++.            .......         .....
T Consensus       151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~------------~~~~~~~---------~~~~~  209 (251)
T 3orf_A          151 RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT------------NRKYMSD---------ANFDD  209 (251)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH------------HHHHCTT---------SCGGG
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc------------hhhhccc---------ccccc
Confidence            1223368999999999999999877     58999999999997642            1111111         23345


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|+|++++.
T Consensus       210 ~~~~~dva~~i~~  222 (251)
T 3orf_A          210 WTPLSEVAEKLFE  222 (251)
T ss_dssp             SBCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHH
Confidence            7889999998864

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.85  E-value=8.3e-21  Score=171.29  Aligned_cols=198  Identities=15%  Similarity=0.062  Sum_probs=133.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------cCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++||||||+|+||.+++++|+++|++|+++++......+.....+  ...++.++.+|+.+..            +.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999999887443322222221111  2357888999997742            237


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc--------CCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV--------GARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~--------~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +|+||||||......     ..++++..+++|+.|+.++++++...        +.+||++||...+....         
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  175 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA---------  175 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT---------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC---------
Confidence            899999999764311     23457789999999999999888543        23799999976542110         


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                            .....|+.+|++.+.+++.++.+.   |+++++++||.|.++....   .........+..         ....
T Consensus       176 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~---------~~~~  237 (272)
T 4e3z_A          176 ------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS---GGLPDRAREMAP---------SVPM  237 (272)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------------------CCTT
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc---cCChHHHHHHhh---------cCCc
Confidence                  112569999999999999998765   8999999999999875311   111111111111         1223


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      ..+.+++|+|++++.
T Consensus       238 ~~~~~~edvA~~i~~  252 (272)
T 4e3z_A          238 QRAGMPEEVADAILY  252 (272)
T ss_dssp             SSCBCHHHHHHHHHH
T ss_pred             CCCcCHHHHHHHHHH
Confidence            346789999999864

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.85  E-value=9e-21  Score=173.52  Aligned_cols=166  Identities=17%  Similarity=0.066  Sum_probs=127.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc--------cccc---ccc--cCCCceEEeeCcccccc--
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--------KENV---MHH--FGNPNFELIRHDVVEPL--  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~--------~~~~---~~~--~~~~~~~~~~~D~~~~~--  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+....        .+.+   ...  ....++.++.+|+.++.  
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            56789999999999999999999999999999999873211        1111   011  12356888999997742  


Q ss_pred             ----------cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccC
Q 019470          178 ----------LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGD  236 (340)
Q Consensus       178 ----------~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~  236 (340)
                                +.++|++|||||......     ..++++..+++|+.|+.++++++...    +  .+||++||...+..
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~  184 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG  184 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence                      237999999999764332     23457889999999999999987432    3  38999999765421


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCC
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRM  294 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~  294 (340)
                                      ......|+.+|++.+.+++.++.+.   |+++++|+||.|.++..
T Consensus       185 ----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~  229 (299)
T 3t7c_A          185 ----------------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML  229 (299)
T ss_dssp             ----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence                            1223689999999999999998774   89999999999998753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.85  E-value=2.3e-20  Score=165.58  Aligned_cols=188  Identities=16%  Similarity=0.160  Sum_probs=137.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~~D~  183 (340)
                      .|+||||||+++||+++++.|+++|++|++++|+.+...+...   ...++..+.+|+.++            .+.++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi   78 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV   78 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3689999999999999999999999999999996543322211   234678889999775            2347999


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      +|||||......    ..+++++.+++|+.++..+.+++.    +.+.++|++||...+..                ...
T Consensus        79 LVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~----------------~~~  142 (247)
T 3ged_A           79 LVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS----------------EPD  142 (247)
T ss_dssp             EEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC----------------CTT
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC----------------CCC
Confidence            999999765433    234588999999999998888774    33459999999764311                112


Q ss_pred             CChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHH
Q 019470          256 RSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      ...|+.||++.+.+.+.++.+.  +++++.|.||.|-.+..        ..+.....+..|+.         -+...+|+
T Consensus       143 ~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~--------~~~~~~~~~~~Pl~---------R~g~pedi  205 (247)
T 3ged_A          143 SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQ--------QEFTQEDCAAIPAG---------KVGTPKDI  205 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----------CCHHHHHTSTTS---------SCBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCc--------HHHHHHHHhcCCCC---------CCcCHHHH
Confidence            2679999999999999998775  89999999999966542        12223333333321         25678899


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |++++.
T Consensus       206 A~~v~f  211 (247)
T 3ged_A          206 SNMVLF  211 (247)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.85  E-value=9.4e-21  Score=172.44  Aligned_cols=164  Identities=12%  Similarity=0.097  Sum_probs=125.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCccccc---ccccCCCceEEeeCcccccc---------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~---------  177 (340)
                      ++++|++|||||+|+||.+++++|+++|+   +|++++|+.+...+..   .......++.++.+|+.++.         
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            35788999999999999999999999998   9999998754322211   11112457888899997752         


Q ss_pred             ---cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCC
Q 019470          178 ---LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       178 ---~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                         +.++|+||||||......     ..+++++.+++|+.|+.++++++    ++.+ .+||++||...+.         
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~---------  180 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD---------  180 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS---------
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC---------
Confidence               236999999999754211     23457889999999999999988    3344 4999999976542         


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                             +......|+.+|++.+.+++.++.+   .|+++++++||.|..+
T Consensus       181 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~  224 (287)
T 3rku_A          181 -------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE  224 (287)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred             -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence                   1122368999999999999999887   5899999999999886

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.85  E-value=1.9e-20  Score=166.64  Aligned_cols=188  Identities=17%  Similarity=0.116  Sum_probs=131.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+...+ .         ..+.+|+.++.            +.+
T Consensus        12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~---------~~~~~D~~~~~~~~~~~~~~~~~~g~   81 (247)
T 1uzm_A           12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-L---------FGVEVDVTDSDAVDRAFTAVEEHQGP   81 (247)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-S---------EEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-h---------cCeeccCCCHHHHHHHHHHHHHHcCC
Confidence            4678899999999999999999999999999999996543211 1         12567776531            236


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|+||||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+..               
T Consensus        82 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  146 (247)
T 1uzm_A           82 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG---------------  146 (247)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC---------------
Confidence            899999999754321    2345788999999999999988753    454 8999999754311               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+   .|+++++++||.+.++...    .+.......+....         ....++
T Consensus       147 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~~---------p~~~~~  212 (247)
T 1uzm_A          147 -IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR----ALDERIQQGALQFI---------PAKRVG  212 (247)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HSCHHHHHHHGGGC---------TTCSCB
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh----hcCHHHHHHHHhcC---------CCCCCc
Confidence             112268999999999999998876   4899999999999765310    00011111111111         123478


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      +++|+|++++.
T Consensus       213 ~~~dvA~~~~~  223 (247)
T 1uzm_A          213 TPAEVAGVVSF  223 (247)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            99999998764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=1.7e-20  Score=168.69  Aligned_cols=164  Identities=13%  Similarity=0.027  Sum_probs=126.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...   ......++..+.+|+.++.            
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5678899999999999999999999999999999997543222111   1122335888899997742            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|++|||||......    ..++++..+++|+.++.++++++..    .+. +||++||...+.             
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  151 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ-------------  151 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS-------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC-------------
Confidence            236899999999754332    2345788999999999999998854    233 899999976542             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                         +......|+.+|++.+.+++.++.+.   |+++++++||.|.++
T Consensus       152 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~  195 (265)
T 3lf2_A          152 ---PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG  195 (265)
T ss_dssp             ---CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence               11223689999999999999998764   899999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.85  E-value=1.4e-20  Score=169.28  Aligned_cols=163  Identities=12%  Similarity=0.037  Sum_probs=121.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      ++|++|||||+|+||.+++++|+++|++|++++|+.+...+..... .....+..+.+|+.++.            +.++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5679999999999999999999999999999999754322211111 11346788889987742            2379


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |++|||||......    ..++++..+++|+.|+.++++++..    .+. +||++||...+..                
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~----------------  146 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV----------------  146 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC----------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc----------------
Confidence            99999999764332    2245778999999999988887743    343 8999999765421                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh-CCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~-gi~~~ivRp~~i~G~~  293 (340)
                      ......|+.+|++.+.+++.++.+. |+++++++||.|..+.
T Consensus       147 ~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~  188 (264)
T 3tfo_A          147 VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL  188 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence            1223679999999999999998775 8999999999997764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.85  E-value=6.6e-21  Score=171.67  Aligned_cols=199  Identities=18%  Similarity=0.102  Sum_probs=136.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ..++|++|||||+|+||++++++|+++|++|+++++......+.....+  ...++..+.+|+.++.            +
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999998665443322222111  2346788899997742            2


Q ss_pred             CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      .++|++|||||.......    .++++..+++|+.|+.++++++...   +.+||++||...+..               
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  168 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL---------------  168 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC---------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC---------------
Confidence            379999999997643332    2347788999999999999988664   238999999765421               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+.   |+++++++||.|..+....   .........+.+.         .....+.
T Consensus       169 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~---------~p~~r~~  235 (267)
T 3u5t_A          169 -HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE---GKSDEVRDRFAKL---------APLERLG  235 (267)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTS---------STTCSCB
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc---cCCHHHHHHHHhc---------CCCCCCc
Confidence             1122689999999999999999874   8999999999998764211   0001112222222         2233578


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      .++|+|++++.
T Consensus       236 ~pedvA~~v~~  246 (267)
T 3u5t_A          236 TPQDIAGAVAF  246 (267)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            89999998864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.85  E-value=4.7e-20  Score=164.09  Aligned_cols=164  Identities=16%  Similarity=0.131  Sum_probs=124.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+...+ ....+  ...++.++.+|+.++.            +
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRA-LGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3567899999999999999999999999999999996433221 11111  1246788899987742            2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|+||||||......    ..++++..+++|+.|+.++++++..    .+.+||++||...+..              
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  148 (247)
T 2jah_A           83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVN--------------  148 (247)
T ss_dssp             SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCC--------------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCC--------------
Confidence            37999999999754322    2234678899999999999988743    2358999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        ......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       149 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  192 (247)
T 2jah_A          149 --VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL  192 (247)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence              122368999999999999998876   48999999999998864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.85  E-value=8.9e-21  Score=171.53  Aligned_cols=199  Identities=16%  Similarity=0.066  Sum_probs=137.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+..... ...+  ...++.++.+|+.+..            
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKA-EHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHH-HHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            356788999999999999999999999999999999975432211 1111  1246788889987642            


Q ss_pred             cCCCCEEEEcccCCCC-CC-----CcCChhhHHHHHHHHH----HHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASP-VH-----YKFNPVKTIKTNVVGT----LNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~-~~-----~~~~~~~~~~~Nv~g~----~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      +.++|+||||||.... ..     ..++++..+++|+.++    ..+++.+++.+. +||++||...+..          
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------  178 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV----------  178 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC----------
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC----------
Confidence            1359999999997643 11     2234677999999994    566666666664 9999999765421          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                          .+..+...|+.+|++.|.+++.++.+.   + ++++++||.+.++......    ..+...+....+         
T Consensus       179 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~p---------  240 (279)
T 3ctm_A          179 ----NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS----KDMKAKWWQLTP---------  240 (279)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC----HHHHHHHHHHST---------
T ss_pred             ----CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC----hHHHHHHHHhCC---------
Confidence                001233689999999999999998763   6 9999999999887532111    122222222111         


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+++++|+|++++.
T Consensus       241 ~~~~~~~~dvA~~~~~  256 (279)
T 3ctm_A          241 LGREGLTQELVGGYLY  256 (279)
T ss_dssp             TCSCBCGGGTHHHHHH
T ss_pred             ccCCcCHHHHHHHHHH
Confidence            1247888999988764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.85  E-value=1.4e-21  Score=178.90  Aligned_cols=183  Identities=17%  Similarity=0.276  Sum_probs=129.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC-CCcc--cc--cccccCCCceEEeeCccccc-----ccCCCCEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRK--EN--VMHHFGNPNFELIRHDVVEP-----LLLEVDQIY  185 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~-~~~~--~~--~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vi  185 (340)
                      +|+|+||||||+||++|+++|+++|++|++++|+. ....  +.  ....+...+++++.+|+.++     .+.++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            57899999999999999999999999999999975 1110  10  00111224678888998764     467899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CChHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEG  262 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~s  262 (340)
                      |+++...               +.++.+++++|++.| + +||+ |   +||...    +|.     .+..| .+.| .+
T Consensus        82 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~s  132 (307)
T 2gas_A           82 CAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRH-----DAVEPVRQVF-EE  132 (307)
T ss_dssp             ECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSC-----CCCTTHHHHH-HH
T ss_pred             ECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccc-----cCCCcchhHH-HH
Confidence            9998531               456789999999998 7 6763 3   454321    111     12222 3578 99


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHH---HHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVA---QALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |+.+|.+++    +.+++++++||+.+++....        .+..   ....++.+.++++++..++|++++|++++++.
T Consensus       133 K~~~e~~~~----~~~i~~~~lrp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  200 (307)
T 2gas_A          133 KASIRRVIE----AEGVPYTYLCCHAFTGYFLR--------NLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIR  200 (307)
T ss_dssp             HHHHHHHHH----HHTCCBEEEECCEETTTTGG--------GTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHH----HcCCCeEEEEcceeeccccc--------cccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHH
Confidence            999998875    45899999999999886421        1111   01134456677888889999999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.85  E-value=5.1e-21  Score=171.15  Aligned_cols=161  Identities=19%  Similarity=0.075  Sum_probs=120.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEVD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~D  182 (340)
                      +|+++||||+|+||++++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999643222111110 01245788889987742            23799


Q ss_pred             EEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       183 ~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +||||||......    ..++++..+++|+.++.++++++..    .+  .+||++||...+..                
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  145 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG----------------  145 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC----------------
Confidence            9999999754322    2235678999999999988887644    34  38999999764321                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ......|+.+|++.+.+++.++.+   .|+++++++||.|.++
T Consensus       146 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  188 (256)
T 1geg_A          146 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  188 (256)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence            112268999999999999998876   4899999999999876

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=7.3e-21  Score=172.24  Aligned_cols=166  Identities=16%  Similarity=0.071  Sum_probs=123.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---ccccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      .+++|++|||||+|+||+++++.|+++|++|++++|+.....+..   ........+.++.+|+.++.            
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            467889999999999999999999999999999999643222111   11111235778889987752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHH----HHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVG----TLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g----~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      +.++|+||||||......    ..++++..+++|+.+    +..+++.+++.+   .+||++||...+..          
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~----------  178 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  178 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc----------
Confidence            137999999999754332    223577899999999    666677777766   48999999876532          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                          .+..+...|+.+|++.+.+++.++.+     .++++++++||.|.++
T Consensus       179 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~  225 (279)
T 1xg5_A          179 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  225 (279)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ----CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence                11123367999999999999888765     3799999999999876

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.84  E-value=1.5e-21  Score=179.79  Aligned_cols=181  Identities=19%  Similarity=0.286  Sum_probs=130.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~Ag~~  191 (340)
                      ++|+||||||+||++++++|+++|++|++++|+.......+. .+...+++++.+|+.++     .+.++|+|||+++..
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-EFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-HHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-HhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence            589999999999999999999999999999997642211111 11224678888998764     567899999999742


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CChHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGKRTAET  268 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK~~~E~  268 (340)
                                     ++.++.+++++|++.+ + +||+ |   +||...    +|.     .+..+ ...| .+|..+|.
T Consensus        91 ---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~sK~~~e~  141 (318)
T 2r6j_A           91 ---------------QILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRI-----NALPPFEALI-ERKRMIRR  141 (318)
T ss_dssp             ---------------GSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTC-----CCCHHHHHHH-HHHHHHHH
T ss_pred             ---------------hhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccc-----cCCCCcchhH-HHHHHHHH
Confidence                           2456789999999998 7 6764 3   354321    111     12222 2468 99999998


Q ss_pred             HHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          269 LTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       269 ~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +++    +.+++++++||+.+++.        ++..++.....++.+.++++++..++|++++|++++++.
T Consensus       142 ~~~----~~~~~~~~lr~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  200 (318)
T 2r6j_A          142 AIE----EANIPYTYVSANCFASY--------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIK  200 (318)
T ss_dssp             HHH----HTTCCBEEEECCEEHHH--------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred             HHH----hcCCCeEEEEcceehhh--------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHH
Confidence            874    35899999999887663        223333322345567778888899999999999999865

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.84  E-value=1.4e-21  Score=178.87  Aligned_cols=187  Identities=17%  Similarity=0.281  Sum_probs=131.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc--cccc--ccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--KENV--MHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~--~~~~--~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      +|+|+||||||+||++|+++|+++|++|++++|.....  .+..  ...+...+++++.+|+.++     .+.++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            56899999999999999999999999999999975432  1110  1112235688899998764     4568999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CChHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEGK  263 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~sK  263 (340)
                      +++..               ++.++.+++++|++.+ + +||+ |   +||...    .|.     .+..| ...| .+|
T Consensus        84 ~a~~~---------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~sK  134 (308)
T 1qyc_A           84 TVGSL---------------QIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNV-----HAVEPAKSVF-EVK  134 (308)
T ss_dssp             CCCGG---------------GSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSC-----CCCTTHHHHH-HHH
T ss_pred             CCcch---------------hhhhHHHHHHHHHhcCCCceEee-c---ccccCc----ccc-----ccCCcchhHH-HHH
Confidence            99842               2456789999999998 7 6763 4   344321    111     22223 2468 999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      ..+|.+++.    .+++++++||+.++|.....    +.. .......++.+.++++++..++|++++|++++++.+
T Consensus       135 ~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (308)
T 1qyc_A          135 AKVRRAIEA----EGIPYTYVSSNCFAGYFLRS----LAQ-AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  202 (308)
T ss_dssp             HHHHHHHHH----HTCCBEEEECCEEHHHHTTT----TTC-TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             HHHHHHHHh----cCCCeEEEEeceeccccccc----ccc-ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHH
Confidence            999988753    58999999999998853210    000 000112345667788889999999999999998753

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.84  E-value=3e-20  Score=166.28  Aligned_cols=160  Identities=19%  Similarity=0.130  Sum_probs=122.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC--ccccccccc--CCCceEEeeCcccccc------------cC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG--RKENVMHHF--GNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~--~~~~~~~~~--~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +|+++||||+|+||++++++|+++|++|++++|+...  ..+ ....+  ...++.++.+|+.++.            +.
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAE-TIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHH-HHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHH-HHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999996543  111 11111  1346788899987742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++...    +  .+||++||...+..             
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  147 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-------------  147 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-------------
Confidence            7999999999754322    22357789999999999999888642    3  58999999765421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                         ......|+.+|++.+.+++.++.+   .|+++++++||.|.++
T Consensus       148 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  190 (258)
T 3a28_C          148 ---FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG  190 (258)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence               122368999999999999998876   4899999999999765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.84  E-value=1.2e-21  Score=180.47  Aligned_cols=184  Identities=17%  Similarity=0.286  Sum_probs=130.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC-CCc---ccccccccCCCceEEeeCccccc-----ccCCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGR---KENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~-~~~---~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vi  185 (340)
                      ++|+|+||||||+||++|+++|+++|++|++++|+. ...   .......+...+++++.+|+.++     .+.++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            356899999999999999999999999999999975 211   11111111224678888998764     467899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC-CChHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV-RSCYDEG  262 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~-~~~Y~~s  262 (340)
                      |+++..               ++.++.+++++|++.| + +|| .|   +||...    +|.     .+..+ .+.| .+
T Consensus        83 ~~a~~~---------------~~~~~~~l~~aa~~~g~v~~~v-~S---~~g~~~----~~~-----~~~~p~~~~y-~s  133 (321)
T 3c1o_A           83 SALPFP---------------MISSQIHIINAIKAAGNIKRFL-PS---DFGCEE----DRI-----KPLPPFESVL-EK  133 (321)
T ss_dssp             ECCCGG---------------GSGGGHHHHHHHHHHCCCCEEE-CS---CCSSCG----GGC-----CCCHHHHHHH-HH
T ss_pred             ECCCcc---------------chhhHHHHHHHHHHhCCccEEe-cc---ccccCc----ccc-----ccCCCcchHH-HH
Confidence            999852               1566789999999998 7 676 23   454321    111     12122 3578 99


Q ss_pred             HHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHH---HHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          263 KRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVA---QALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       263 K~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |..+|.+++    +.+++++++||+.+++..        ...+..   ....++.+.++++++..++|++++|+++++..
T Consensus       134 K~~~e~~~~----~~~~~~~~lrp~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (321)
T 3c1o_A          134 KRIIRRAIE----AAALPYTYVSANCFGAYF--------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIK  201 (321)
T ss_dssp             HHHHHHHHH----HHTCCBEEEECCEEHHHH--------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHH
T ss_pred             HHHHHHHHH----HcCCCeEEEEeceecccc--------ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHH
Confidence            999999885    358999999999887742        122221   11244567778888999999999999999865

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=8.5e-21  Score=171.27  Aligned_cols=166  Identities=11%  Similarity=-0.006  Sum_probs=124.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +.+++|+++||||+|+||.+++++|+++|++|++++|+.....+...+. ....++.++.+|+.++.            +
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            3567889999999999999999999999999999999653322111110 01246888899987742            2


Q ss_pred             CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||.......    .++++..+++|+.++.++++++.    +.+. +||++||...+..             
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------------  173 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-------------  173 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-------------
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-------------
Confidence            379999999997543321    23466899999999888877764    4454 8999999876532             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhh------CCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRGA------GVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~~------gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.|.+++.++.+.      |+++++++||.+.++.
T Consensus       174 ---~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~  220 (272)
T 1yb1_A          174 ---VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF  220 (272)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence               1122579999999999999988764      8999999999998764

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.84  E-value=3.9e-20  Score=163.08  Aligned_cols=163  Identities=15%  Similarity=0.016  Sum_probs=122.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc-----c-------CC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL-----L-------LE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-----~-------~~  180 (340)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.+...+...+.  ....++.++.+|+.++.     +       .+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3679999999999999999999999999999999754322211110  12357888899997752     1       36


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|++|||||......    ..++++..+++|+.++.++++++..    .+.++|++||+..+..                
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----------------  144 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL----------------  144 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC----------------
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc----------------
Confidence            999999999765433    2345778999999999999998854    3457788877553311                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh-hCCcEEEEEeCceeCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~-~gi~~~ivRp~~i~G~~  293 (340)
                      ......|+.+|++.+.+++.+..+ .++++++++||.|..+.
T Consensus       145 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~  186 (235)
T 3l77_A          145 IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF  186 (235)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred             CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc
Confidence            112257999999999999988544 48999999999997754

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.84  E-value=2e-20  Score=170.80  Aligned_cols=198  Identities=12%  Similarity=-0.029  Sum_probs=139.3

Q ss_pred             CCCCCeEEEEcCchH--HHHHHHHHHHhCCCeEEEEeCCCCCcc--cccccccCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGF--VGSHLVDRLIARGDSVIVVDNFFTGRK--ENVMHHFGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~--IG~~l~~~Ll~~G~~V~~l~r~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~-----------  177 (340)
                      .+++|++|||||+|+  ||.+++++|+++|++|++++|+.....  +.+...  ..++.++.+|+.++.           
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE--LGAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH--HTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--cCCceEEECCCCCHHHHHHHHHHHHH
Confidence            467899999999977  999999999999999999998632111  111111  135778889997752           


Q ss_pred             -cCCCCEEEEcccCCCC----C----CCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASP----V----HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~----~----~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|++|||||....    .    ...++++..+++|+.++.++++++...-   .+||++||...+..         
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---------  176 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV---------  176 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB---------
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC---------
Confidence             2379999999997541    1    1234577899999999999999987642   38999999775521         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCc
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGK  322 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  322 (340)
                             ......|+.+|++.+.+++.++.+   .|+++++++||.|.++....  ......+...+.+..++       
T Consensus       177 -------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~p~-------  240 (293)
T 3grk_A          177 -------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASG--IGDFRYILKWNEYNAPL-------  240 (293)
T ss_dssp             -------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------CCHHHHHHHHHHHSTT-------
T ss_pred             -------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhc--ccchHHHHHHHHhcCCC-------
Confidence                   122368999999999999999876   48999999999998874321  11112233333332222       


Q ss_pred             eeEccccHHHHHHHHHh
Q 019470          323 QTRSFQFVSDLVRLTET  339 (340)
Q Consensus       323 ~~~~~v~v~Dva~a~~~  339 (340)
                        ..+..++|+|++++.
T Consensus       241 --~r~~~pedvA~~v~~  255 (293)
T 3grk_A          241 --RRTVTIDEVGDVGLY  255 (293)
T ss_dssp             --SSCCCHHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHH
Confidence              236778999998764

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.84  E-value=4.3e-20  Score=162.43  Aligned_cols=185  Identities=13%  Similarity=0.022  Sum_probs=129.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----c----CCCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----L----LEVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~----~~~D~Vih  186 (340)
                      ||++|||||+|+||.+++++|+++|++|++++|+.+...+.. ..+ ..++.++.+|+.+..     +    ...|+|||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVT-NCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            468999999999999999999999999999999654322221 111 346778888887642     1    22499999


Q ss_pred             cccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          187 LACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       187 ~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      |||......    ..++++..+++|+.++.++++++...    +.+||++||...+..                ......
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~~~~  142 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP----------------KAQEST  142 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC----------------CTTCHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC----------------CCCCch
Confidence            999764333    22347789999999999999988653    238999999776521                123368


Q ss_pred             HHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR  335 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~  335 (340)
                      |+.+|++.+.+++.++.+.   |++++.++||.|..+...        .+    ..         ......+++++|+|+
T Consensus       143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------~~----~~---------~~~~~~~~~~~dvA~  201 (230)
T 3guy_A          143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE--------TS----GK---------SLDTSSFMSAEDAAL  201 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------------CCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH--------hc----CC---------CCCcccCCCHHHHHH
Confidence            9999999999999998874   899999999999775311        00    00         012345889999999


Q ss_pred             HHHh
Q 019470          336 LTET  339 (340)
Q Consensus       336 a~~~  339 (340)
                      +++.
T Consensus       202 ~i~~  205 (230)
T 3guy_A          202 MIHG  205 (230)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.84  E-value=3.4e-20  Score=163.89  Aligned_cols=198  Identities=13%  Similarity=0.091  Sum_probs=141.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc-------CCCCEE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQI  184 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~D~V  184 (340)
                      .++++|+++||||+++||+++++.|+++|++|++.+|+........... ...++..+.+|+.++..       .++|++
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAK-DGGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            3678999999999999999999999999999999999643211111111 23467888899877532       358999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |||||......    ..++|++.+++|+.|+..+.+++.    +.+  .++|++||......                ..
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g----------------~~  147 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG----------------GI  147 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------------CS
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC----------------CC
Confidence            99999765443    234689999999999999888753    333  38999999654311                11


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHH--HHHHHHHHhCCCeEEecCCceeEcccc
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQTRSFQF  329 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~v~  329 (340)
                      ....|+.||++...+.+.++.+   +||+++.|.||.|-.+...    ...  ....+.+.+..|+.         -+..
T Consensus       148 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~----~~~~~~~~~~~~~~~~Plg---------R~g~  214 (247)
T 4hp8_A          148 RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE----ALRADAARNKAILERIPAG---------RWGH  214 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHTSHHHHHHHHTTCTTS---------SCBC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh----hcccCHHHHHHHHhCCCCC---------CCcC
Confidence            1257999999999999999876   4899999999999776421    110  12233344443332         2556


Q ss_pred             HHHHHHHHHh
Q 019470          330 VSDLVRLTET  339 (340)
Q Consensus       330 v~Dva~a~~~  339 (340)
                      .+|+|.+++.
T Consensus       215 peeiA~~v~f  224 (247)
T 4hp8_A          215 SEDIAGAAVF  224 (247)
T ss_dssp             THHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            7899888764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.84  E-value=7.1e-20  Score=165.96  Aligned_cols=199  Identities=10%  Similarity=-0.021  Sum_probs=142.3

Q ss_pred             CCCCCeEEEEcCchH--HHHHHHHHHHhCCCeEEEEeCCCCCc-ccccccccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGF--VGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~--IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      .+++|+++||||+|+  ||.+++++|+++|++|++++|+.... .+.+...  ...+.++.+|+.+..            
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAE--FNPAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGG--GCCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHh--cCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            467889999999966  99999999999999999999975111 1111111  134788899997742            


Q ss_pred             cCCCCEEEEcccCCCCC---------CCcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPV---------HYKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~---------~~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                      +.++|+||||||.....         ...+++...+++|+.++.++++++...    +.+||++||...+.         
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------  171 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK---------  171 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS---------
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc---------
Confidence            23689999999976431         223457789999999999999988653    34899999976542         


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                             +......|+.+|++.+.+++.++.+   .|+++++++||.|.++....  ......+........+.      
T Consensus       172 -------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~p~------  236 (280)
T 3nrc_A          172 -------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG--ISNFKKMLDYNAMVSPL------  236 (280)
T ss_dssp             -------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG--CTTHHHHHHHHHHHSTT------
T ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc--CcchHHHHHHHHhcCCC------
Confidence                   1223368999999999999998876   58999999999999875321  11122333333332222      


Q ss_pred             ceeEccccHHHHHHHHHhC
Q 019470          322 KQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~~  340 (340)
                         ..+..++|+|++++.+
T Consensus       237 ---~~~~~pedvA~~v~~l  252 (280)
T 3nrc_A          237 ---KKNVDIMEVGNTVAFL  252 (280)
T ss_dssp             ---CSCCCHHHHHHHHHHT
T ss_pred             ---CCCCCHHHHHHHHHHH
Confidence               2367889999998753

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.84  E-value=2.5e-20  Score=172.46  Aligned_cols=166  Identities=17%  Similarity=0.118  Sum_probs=122.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc----cccc--CCCceEEeeCcccccc---------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV----MHHF--GNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~----~~~~--~~~~~~~~~~D~~~~~---------  177 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++.+|+........    ....  ...++..+.+|+.++.         
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999998643322211    1110  1346888999997752         


Q ss_pred             ---cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCC
Q 019470          178 ---LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ---~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                         +.++|+||||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||...+...        
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~--------  153 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT--------  153 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC--------
Confidence               237999999999754322    22356788999999999999998    55554 89999997755211        


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                             ......|+.||++.|.+++.++.+   .|+++++|+||.|.++.
T Consensus       154 -------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          154 -------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             -------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             -------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence                   011267999999999999999877   59999999999998653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.84  E-value=5.4e-20  Score=167.21  Aligned_cols=164  Identities=14%  Similarity=0.038  Sum_probs=123.5

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc------ccccc--CCCceEEeeCcccccc-----
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHHF--GNPNFELIRHDVVEPL-----  177 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~------~~~~~--~~~~~~~~~~D~~~~~-----  177 (340)
                      .+.+++|++|||||+|+||.+++++|+++|++|++++|+.+...+.      ....+  ...++.++.+|+.++.     
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3567889999999999999999999999999999999986532210      01011  1346888999997742     


Q ss_pred             -------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCC
Q 019470          178 -------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHP  241 (340)
Q Consensus       178 -------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~  241 (340)
                             +.++|++|||||......    ..++++..+++|+.++.++++++...    + .+||++||...+...    
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----  159 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----  159 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG----
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC----
Confidence                   237999999999764433    22347788999999999999988654    3 389999996643211    


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCce
Q 019470          242 QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNT  289 (340)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i  289 (340)
                                 ......|+.+|++.+.+++.++.+   .|+++++++||.+
T Consensus       160 -----------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~  199 (285)
T 3sc4_A          160 -----------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTT  199 (285)
T ss_dssp             -----------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSC
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCc
Confidence                       012267999999999999999876   5899999999953

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=1.9e-20  Score=166.93  Aligned_cols=190  Identities=13%  Similarity=0.046  Sum_probs=134.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---ccc-CCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HHF-GNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~~-~~~~~~~~~~D~~~~~-----------  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+...+...   ... ...++.++.+|+.+..           
T Consensus         4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999997543222111   111 2256788889997742           


Q ss_pred             -cCCCCEEEEcccCCCCCCC---cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~~---~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       +.++|++|||||.......   .++++..+++|+.++.++++++.    +.+. +||++||...+..            
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~------------  151 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG------------  151 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC------------
Confidence             2369999999997543322   23477899999999999998873    3443 8999999664311            


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                          ..+...|+.+|++.+.+++.++.+.   |+++++++||.|..+.            .....  ..       ....
T Consensus       152 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~------------~~~~~--~~-------~~~~  206 (250)
T 3nyw_A          152 ----FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM------------AKKAG--TP-------FKDE  206 (250)
T ss_dssp             -----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH------------HHHTT--CC-------SCGG
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch------------hhhcC--CC-------cccc
Confidence                1123689999999999999998764   8999999999996642            11111  11       1123


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      .++.++|++++++.
T Consensus       207 ~~~~p~dva~~v~~  220 (250)
T 3nyw_A          207 EMIQPDDLLNTIRC  220 (250)
T ss_dssp             GSBCHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHH
Confidence            47889999998764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.84  E-value=1.8e-20  Score=173.04  Aligned_cols=165  Identities=14%  Similarity=0.103  Sum_probs=125.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc--------ccccc---cc--cCCCceEEeeCcccccc--
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--------KENVM---HH--FGNPNFELIRHDVVEPL--  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~--------~~~~~---~~--~~~~~~~~~~~D~~~~~--  177 (340)
                      .+++|++|||||+|+||.++++.|+++|++|++++|.....        .+.+.   ..  ....++.++.+|+.++.  
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            46788999999999999999999999999999998863221        11111   00  12346888899997742  


Q ss_pred             ----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCC
Q 019470          178 ----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDP  237 (340)
Q Consensus       178 ----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~  237 (340)
                                +.++|++|||||......    ..++++..+++|+.|+.++++++..    .+  .+||++||...+.. 
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~-  201 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG-  201 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC-
Confidence                      237999999999765332    2345778999999999999988743    33  37999999765421 


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                                     ......|+.+|++.+.+++.++.+.   |+++++|+||.|.++.
T Consensus       202 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  245 (317)
T 3oec_A          202 ---------------APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM  245 (317)
T ss_dssp             ---------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred             ---------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence                           1223689999999999999998774   8999999999998863

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.84  E-value=2e-20  Score=167.22  Aligned_cols=161  Identities=18%  Similarity=0.157  Sum_probs=123.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      +|+++||||+|+||++++++|+++|  +.|++++|+.+...+ +...+ ..++.++.+|+.++.            +.++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKK-LKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHH-HHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHH-HHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            4799999999999999999999985  688888886433222 11111 246788899997752            2379


Q ss_pred             CEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHH----HHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLA----KRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       182 D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      |++|||||......     ..++++..+++|+.|+.++++++    ++.+.++|++||...+.                +
T Consensus        80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~----------------~  143 (254)
T 3kzv_A           80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM----------------Y  143 (254)
T ss_dssp             CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC----------------S
T ss_pred             cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc----------------C
Confidence            99999999754311     23457789999999999999988    45456999999976542                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh-CCcEEEEEeCceeCCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGPRM  294 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~-gi~~~ivRp~~i~G~~~  294 (340)
                      ......|+.+|++.+.+++.++.+. ++++++++||.|.++..
T Consensus       144 ~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~  186 (254)
T 3kzv_A          144 FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQ  186 (254)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhH
Confidence            2233689999999999999998875 89999999999998753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=1.2e-20  Score=171.28  Aligned_cols=197  Identities=15%  Similarity=0.059  Sum_probs=133.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.+...+.....  .....+.++.+|+.++.            +
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467889999999999999999999999999999999754322211110  11223578889987752            2


Q ss_pred             CCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cC---CeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG---ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~---~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      .++|+||||||......     ..++++..+++|+.|+.++++++..    .+   .+||++||...+.           
T Consensus       110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~-----------  178 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT-----------  178 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC-----------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC-----------
Confidence            36899999999754321     2345778999999999888877643    32   3899999976542           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                           +......|+.+|++.+.+++.++.+   .|+++++++||.|..+..        ..    +...  .........
T Consensus       179 -----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~--------~~----~~~~--~~~~~~~~~  239 (281)
T 4dry_A          179 -----PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMT--------AR----MSTG--VLQANGEVA  239 (281)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------------------CE--EECTTSCEE
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhh--------hh----hcch--hhhhhhccc
Confidence                 1223368999999999999999876   589999999999977632        11    1110  000001112


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...++.++|+|++++.
T Consensus       240 ~~~~~~pedvA~~v~f  255 (281)
T 4dry_A          240 AEPTIPIEHIAEAVVY  255 (281)
T ss_dssp             ECCCBCHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHH
Confidence            2347899999999864

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.83  E-value=1.1e-19  Score=163.04  Aligned_cols=168  Identities=14%  Similarity=0.020  Sum_probs=125.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCC---CeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----cC---
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARG---DSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----LL---  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~~---  179 (340)
                      ..+++++||||||+|+||++|+++|+++|   ++|++++|+...... +.+. ....++.++.+|+.+..     +.   
T Consensus        17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            45778899999999999999999999999   999999997654321 1111 01246888899987652     11   


Q ss_pred             ------CCCEEEEcccCCC-CCC----CcCChhhHHHHHHHHHHHHHHHHHHc----------------CCeEEEEeCcc
Q 019470          180 ------EVDQIYHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----------------GARFLLTSTSE  232 (340)
Q Consensus       180 ------~~D~Vih~Ag~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----------------~~~~i~~SS~~  232 (340)
                            ++|+||||||... ...    ..++++..+++|+.++.++++++...                +.+||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  6999999999754 111    23356778999999999999988543                35899999977


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       233 v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .+....             +..+...|+.+|++.+.+++.++.+   .++++++++||.|..+.
T Consensus       176 ~~~~~~-------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  226 (267)
T 1sny_A          176 GSIQGN-------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  226 (267)
T ss_dssp             GCSTTC-------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             ccccCC-------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCC
Confidence            653211             1123367999999999999998876   58999999999997764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.83  E-value=3.8e-20  Score=165.41  Aligned_cols=204  Identities=17%  Similarity=0.113  Sum_probs=141.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      +++++|++|||||+++||+++++.|+++|++|++++|+.+.............++..+.+|+.++            .+.
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999997654221111011234678889999775            234


Q ss_pred             CCCEEEEcccCCCCCC---CcCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH---YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~---~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      ++|++|||||......   ..++|+..+++|+.++..+.+++.    +.+.++|++||......                
T Consensus        83 ~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~----------------  146 (258)
T 4gkb_A           83 RLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG----------------  146 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC----------------
T ss_pred             CCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC----------------
Confidence            7999999999754332   234588899999999999888763    33458999999764311                


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                      ......|+.+|++.+.+.+.++.+   +||+++.|.||.|-.+......  ..........+.+..|+   +     .-+
T Consensus       147 ~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~  218 (258)
T 4gkb_A          147 QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRF  218 (258)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCC
Confidence            112267999999999999999876   4899999999999776421100  00011122333333222   1     136


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ...+|+|++++.
T Consensus       219 g~peeiA~~v~f  230 (258)
T 4gkb_A          219 TTPDEIADTAVF  230 (258)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            678999988764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.83  E-value=1.3e-20  Score=168.02  Aligned_cols=165  Identities=19%  Similarity=0.056  Sum_probs=127.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCccccc------------ccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.+...+...+. -...++..+.+|+.++            .+.
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            678999999999999999999999999999999999754332222111 1234678888998775            234


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH-----HcC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK-----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~-----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......    ..++|++.+++|+.|+..+.+++.     +.+ .++|++||......             
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-------------  152 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-------------  152 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB-------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC-------------
Confidence            6999999999765444    234688999999999999888763     223 38999999764321             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.+.+.+.++.+   +|++++.|.||.|..+.
T Consensus       153 ---~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~  196 (255)
T 4g81_D          153 ---RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM  196 (255)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCch
Confidence               112267999999999999999876   48999999999997763

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.83  E-value=7.2e-20  Score=169.73  Aligned_cols=196  Identities=12%  Similarity=-0.019  Sum_probs=138.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEe-CCCCCcccccccc--cCCCceEEeeCcccccc-------------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHH--FGNPNFELIRHDVVEPL-------------  177 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~-r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~-------------  177 (340)
                      +++|++|||||+|+||.++++.|+++|++|++++ |+.+...+.....  ....++.++.+|+.+..             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            5678999999999999999999999999999999 7543222111110  11246778888887654             


Q ss_pred             ----------------cCCCCEEEEcccCCCCCCC------------------cCChhhHHHHHHHHHHHHHHHHH----
Q 019470          178 ----------------LLEVDQIYHLACPASPVHY------------------KFNPVKTIKTNVVGTLNMLGLAK----  219 (340)
Q Consensus       178 ----------------~~~~D~Vih~Ag~~~~~~~------------------~~~~~~~~~~Nv~g~~~ll~~a~----  219 (340)
                                      +.++|+||||||.......                  .++++..+++|+.++.++++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                            1268999999997543221                  33466789999999999988875    


Q ss_pred             HcC------C-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCce
Q 019470          220 RVG------A-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (340)
Q Consensus       220 ~~~------~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i  289 (340)
                      +.+      . +||++||...+..                ......|+.+|++.+.+++.++.+.   |+++++|+||.|
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~----------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v  267 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQP----------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  267 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             hcCCcCCCCCcEEEEECchhhccC----------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence            333      3 8999999765421                1223689999999999999998764   899999999999


Q ss_pred             eCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          290 YGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       290 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .++. . .   . ......+....++.        ..+..++|+|++++.
T Consensus       268 ~T~~-~-~---~-~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~  303 (328)
T 2qhx_A          268 VLVD-D-M---P-PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIF  303 (328)
T ss_dssp             SCCC-C-S---C-HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHH
T ss_pred             cCCc-c-c---c-HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHH
Confidence            8875 1 1   1 22333333322211        036789999998864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.83  E-value=1.3e-20  Score=169.75  Aligned_cols=198  Identities=15%  Similarity=0.066  Sum_probs=138.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++|+++||||+|+||++++++|+++|++|+++++......+.....  ....++.++.+|+.+..            +.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999999986443322221111  12356888999997742            23


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|+||||||......    ..++++..+++|+.++.++++++..    .+ .+||++||...+..              
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  168 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG--------------  168 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--------------
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC--------------
Confidence            7999999999764433    2235778999999999999888743    34 38999999665421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+.   |+++++++||.|.++....    ....    .....    +........+
T Consensus       169 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~----~~~~~----~~~~~~~~~~  234 (269)
T 3gk3_A          169 --AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA----VPQD----VLEAK----ILPQIPVGRL  234 (269)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CC----SGGGCTTSSC
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh----hchh----HHHHH----hhhcCCcCCc
Confidence              1223689999999999999988763   8999999999998875311    1111    11100    1111223457


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ..++|+|++++.
T Consensus       235 ~~p~dvA~~v~~  246 (269)
T 3gk3_A          235 GRPDEVAALIAF  246 (269)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            789999998764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.83  E-value=2.1e-20  Score=166.95  Aligned_cols=199  Identities=13%  Similarity=0.026  Sum_probs=125.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----cc----CCCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LL----LEVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~----~~~D~Vih  186 (340)
                      ||+++||||+|+||.+++++|+++|++|++++|+.+....           + +.+|+.+.     .+    .++|+|||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            4689999999999999999999999999999997543211           0 33444332     22    46799999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCC-----CCC-------C
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKET-----YWG-------N  249 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~-----~~~-------~  249 (340)
                      |||....   ...++..+++|+.++.++++++.    +.+ .+||++||...+......+..+.     ++.       .
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (257)
T 1fjh_A           69 CAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             CCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             CCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhc
Confidence            9996431   24588999999999999999885    334 48999999887632111111000     000       0


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                      ..+..+...|+.+|.+.+.+++.++.+   .|+++++++||.|.++....   ...........+..       ......
T Consensus       146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~-------~~~~~~  215 (257)
T 1fjh_A          146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA---GLQDPRYGESIAKF-------VPPMGR  215 (257)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C-------CCSTTS
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchh---hccchhHHHHHHhc-------ccccCC
Confidence            011123468999999999999988776   58999999999998875211   00000111111100       011224


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +++++|+|++++.
T Consensus       216 ~~~~~dvA~~~~~  228 (257)
T 1fjh_A          216 RAEPSEMASVIAF  228 (257)
T ss_dssp             CCCTHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            7899999998864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.83  E-value=1.8e-20  Score=166.32  Aligned_cols=154  Identities=16%  Similarity=0.107  Sum_probs=121.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc----------cCCCCE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL----------LLEVDQ  183 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------~~~~D~  183 (340)
                      ++|++|||||+|+||++++++|++ .|+.|++++|.....         ...+.++.+|+.++.          ..++|+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~   73 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFDG   73 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCCE
Confidence            567999999999999999999999 788999998864321         134577888887641          126899


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      +|||||......    ..++++..+++|+.++.++++++...-   .++|++||...+..                ....
T Consensus        74 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------------~~~~  137 (244)
T 4e4y_A           74 IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA----------------KPNS  137 (244)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC----------------CTTB
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC----------------CCCC
Confidence            999999764332    233577899999999999999987653   37999999775521                1223


Q ss_pred             ChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          257 SCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ..|+.+|++.+.+++.++.+   +|+++++++||.|.++.
T Consensus       138 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  177 (244)
T 4e4y_A          138 FAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDL  177 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence            68999999999999999874   58999999999998763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.83  E-value=5.2e-20  Score=165.55  Aligned_cols=200  Identities=14%  Similarity=0.083  Sum_probs=142.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.+...+... .+ ..++..+.+|+.++            .+.+
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~-~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~  103 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA-EI-GGGAVGIQADSANLAELDRLYEKVKAEAGR  103 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-CTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hc-CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999997544332222 22 24567788898775            2346


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|++|||||......    ..++|++.+++|+.|+.++.+++...=   .++|++||.....                +.
T Consensus       104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----------------~~  167 (273)
T 4fgs_A          104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----------------GT  167 (273)
T ss_dssp             EEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS----------------CC
T ss_pred             CCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc----------------CC
Confidence            999999999754433    234688999999999999999886542   2799999965431                11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCC---CccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCID---DGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                      .....|+.+|++.+.+.+.++.+.   ||+++.|.||.|..+.....   +..-...+...+.+..|+.         -+
T Consensus       168 ~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~  238 (273)
T 4fgs_A          168 PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RV  238 (273)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CC
Confidence            122689999999999999998774   89999999999977643211   1111123444444444432         25


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ...+|+|.+++.
T Consensus       239 g~peeiA~~v~F  250 (273)
T 4fgs_A          239 GRAEEVAAAALF  250 (273)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            568899988764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.83  E-value=5.4e-20  Score=164.34  Aligned_cols=161  Identities=14%  Similarity=0.076  Sum_probs=115.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc-cccCCCceEEeeCccccc-------ccCCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM-HHFGNPNFELIRHDVVEP-------LLLEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~-~~~~~~~~~~~~~D~~~~-------~~~~~D~Vih~  187 (340)
                      ||++|||||+|+||.+++++|+++|++|++++|+.+....... ... ..++..++.+..+.       .+.++|+||||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~-~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-YPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-CTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCcEEEECHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            4689999999999999999999999999999987543221110 000 11222222222222       23479999999


Q ss_pred             ccCC-CCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC
Q 019470          188 ACPA-SPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS  257 (340)
Q Consensus       188 Ag~~-~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~  257 (340)
                      ||.. ....    ..++++..+++|+.++.++++++.    +.+ .+||++||...+..                .....
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~~~  143 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP----------------WKELS  143 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC----------------CTTCH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC----------------CCCch
Confidence            9975 3222    223577899999999999988874    334 49999999765421                12236


Q ss_pred             hHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCC
Q 019470          258 CYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPR  293 (340)
Q Consensus       258 ~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~  293 (340)
                      .|+.+|++.+.+++.++.+.   |+++++++||.|+|+.
T Consensus       144 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~  182 (254)
T 1zmt_A          144 TYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED  182 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence            89999999999999988764   8999999999998875

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=4.1e-20  Score=163.20  Aligned_cols=153  Identities=20%  Similarity=0.190  Sum_probs=119.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------c--CC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L--LE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~--~~  180 (340)
                      ++|++|||||+|+||++++++|+++|++|++++|+.....         ....++.+|+.++.            +  .+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999999754321         12456677776531            1  37


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|+||||||......     ..++++..+++|+.++.++++++...   +.+||++||...+.                +
T Consensus        73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------------~  136 (236)
T 1ooe_A           73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----------------P  136 (236)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------C
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----------------C
Confidence            999999999754322     22357789999999999999998764   23899999977652                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhh-----CCcEEEEEeCceeCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~-----gi~~~ivRp~~i~G~  292 (340)
                      ......|+.+|++.+.+++.++.+.     |+++++++||.+.++
T Consensus       137 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~  181 (236)
T 1ooe_A          137 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP  181 (236)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence            1223689999999999999998764     499999999999775

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=3.9e-20  Score=166.81  Aligned_cols=161  Identities=21%  Similarity=0.247  Sum_probs=123.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+...+ ....+  ..+.++.+|+.++.            +.+
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA-LEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGR   82 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh--cCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4577899999999999999999999999999999986433221 11111  24778889987642            237


Q ss_pred             CCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCccc-ccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEV-YGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v-~g~~~~~~~~E~~~~~~  250 (340)
                      +|+||||||......     ..++++..+++|+.++.++++++..    .+.+||++||... ++.+             
T Consensus        83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  149 (270)
T 1yde_A           83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-------------  149 (270)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-------------
Confidence            999999999753211     2234778999999999999998853    3459999999653 3321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                          ....|+.+|++.+.+++.++.+   +|+++++++||.|+++.
T Consensus       150 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~  191 (270)
T 1yde_A          150 ----QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL  191 (270)
T ss_dssp             ----TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred             ----CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence                1257999999999999998866   58999999999999863

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.83  E-value=3.6e-20  Score=167.81  Aligned_cols=198  Identities=20%  Similarity=0.166  Sum_probs=140.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----------cCC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----------LLE  180 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----------~~~  180 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|+.+...+.. ..+ ..++.++.+|+.+..           +.+
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~-~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALA-DEL-GNRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH-CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH-HHh-CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4577889999999999999999999999999999999654322221 122 346888999987742           236


Q ss_pred             CCEEEEc-ccCCCCCC---------CcCChhhHHHHHHHHHHHHHHHHHH----------cC-CeEEEEeCcccccCCCC
Q 019470          181 VDQIYHL-ACPASPVH---------YKFNPVKTIKTNVVGTLNMLGLAKR----------VG-ARFLLTSTSEVYGDPLQ  239 (340)
Q Consensus       181 ~D~Vih~-Ag~~~~~~---------~~~~~~~~~~~Nv~g~~~ll~~a~~----------~~-~~~i~~SS~~v~g~~~~  239 (340)
                      +|++||| |+......         ..+++++.+++|+.++.++++++..          .+ .+||++||...+..   
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  180 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG---  180 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC---
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC---
Confidence            8999999 54432211         1123688999999999999988752          12 38999999775521   


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeE
Q 019470          240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  316 (340)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~  316 (340)
                                   ......|+.+|++.+.+++.++.+.   |+++++++||.|..+...    .........+.+..+. 
T Consensus       181 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~-  242 (281)
T 3ppi_A          181 -------------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME----SVGEEALAKFAANIPF-  242 (281)
T ss_dssp             -------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----TTCHHHHHHHHHTCCS-
T ss_pred             -------------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh----cccHHHHHHHHhcCCC-
Confidence                         1233689999999999999988764   899999999999775321    1112233333333321 


Q ss_pred             EecCCceeEccccHHHHHHHHHh
Q 019470          317 VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       317 ~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                             ...+.+++|+|++++.
T Consensus       243 -------~~~~~~pedvA~~v~~  258 (281)
T 3ppi_A          243 -------PKRLGTPDEFADAAAF  258 (281)
T ss_dssp             -------SSSCBCHHHHHHHHHH
T ss_pred             -------CCCCCCHHHHHHHHHH
Confidence                   1347899999999864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=6.3e-20  Score=167.80  Aligned_cols=166  Identities=15%  Similarity=0.054  Sum_probs=125.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCC---ceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNP---NFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~---~~~~~~~D~~~~~-----------  177 (340)
                      ++++|++|||||+|+||++++++|+++|++|++++|+.+...+...... ...   ++.++.+|+.++.           
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999996533221111100 112   6788899987742           


Q ss_pred             -cCCCCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHHc----CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRV----GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                       +.++|+||||||......      ..++++..+++|+.++.++++++...    +.+||++||...+...         
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~---------  173 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA---------  173 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC---------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC---------
Confidence             237999999999754322      22357789999999999999887543    3589999997755321         


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                            ......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       174 ------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~  217 (297)
T 1xhl_A          174 ------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF  217 (297)
T ss_dssp             ------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence                  012367999999999999998865   59999999999998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.82  E-value=1.1e-19  Score=164.34  Aligned_cols=165  Identities=16%  Similarity=0.089  Sum_probs=127.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----------~~  179 (340)
                      +++++|+++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++..+.+|+.+..           ..
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g  108 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIA  108 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            3578899999999999999999999999999999999765443322111 12356788899987752           13


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++++..+++|+.|+.++++++.    +.+. +||++||...+.               
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~---------------  173 (275)
T 4imr_A          109 PVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR---------------  173 (275)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC---------------
Confidence            6999999999754433    223577899999999999999873    3443 899999977552               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                       +......|+.+|++.+.+++.++.+.   |+++++++||.|..+
T Consensus       174 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  217 (275)
T 4imr_A          174 -PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD  217 (275)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence             11223569999999999999998774   899999999999775

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.82  E-value=2.8e-20  Score=167.22  Aligned_cols=179  Identities=16%  Similarity=-0.000  Sum_probs=126.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc-----c-------CC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL-----L-------LE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----~-------~~  180 (340)
                      ++++|+||||+|+||.+++++|++ +|++|++++|+.....+..... ....++.++.+|+.+..     +       .+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            567999999999999999999999 9999999999643222111110 01246788889987642     1       27


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccC-CC----------CCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGD-PL----------QHPQ  242 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~-~~----------~~~~  242 (340)
                      +|+||||||.......    .++++..+++|+.|+.++++++...-   .+||++||...+.. ..          ..++
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  162 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  162 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence            9999999997543322    24467889999999999999998763   38999999765521 10          0112


Q ss_pred             CCCCCC--------------CCCCCCCCChHHHHHHHHHHHHHHHHHh-------hCCcEEEEEeCceeCCC
Q 019470          243 KETYWG--------------NVNPIGVRSCYDEGKRTAETLTMDYHRG-------AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       243 ~E~~~~--------------~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-------~gi~~~ivRp~~i~G~~  293 (340)
                      +|+++.              ...+..+.+.|+.+|++.|.+++.++.+       .|+++++++||.|.++.
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence            222100              0011123478999999999999988765       48999999999998874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.82  E-value=1.5e-20  Score=168.83  Aligned_cols=165  Identities=13%  Similarity=0.049  Sum_probs=121.4

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc--cccccccc--CCCceEEeeCcccccc----------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR--KENVMHHF--GNPNFELIRHDVVEPL----------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~--~~~~~~~~--~~~~~~~~~~D~~~~~----------  177 (340)
                      +++++|++|||||+|+||.+++++|+++|++|++++|.....  .+.....+  ...++.++.+|+.++.          
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   86 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE   86 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            357889999999999999999999999999999998753221  11111111  2356888999997752          


Q ss_pred             --cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc--C-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 --LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV--G-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 --~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~--~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                        +.++|++|||||......    ..++++..+++|+.++.++++++...  + .++|++||...+...           
T Consensus        87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~-----------  155 (262)
T 3ksu_A           87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT-----------  155 (262)
T ss_dssp             HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-----------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-----------
Confidence              236999999999765433    22357788999999999999999875  2 389999997655321           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                           .....|+.+|++.+.+++.++.+.   |++++++.||.|..+
T Consensus       156 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (262)
T 3ksu_A          156 -----GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS  197 (262)
T ss_dssp             -----CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence                 112579999999999999998874   899999999998664

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.82  E-value=8.3e-20  Score=164.92  Aligned_cols=164  Identities=13%  Similarity=0.014  Sum_probs=119.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      +++ |++|||||+|+||.+++++|+++|++|++++|+.+...+.........++.++.+|+.++.            +.+
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            445 7999999999999999999999999999999964332221111111146788889987642            235


Q ss_pred             CCEEEEcccCCCC-CC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-C-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-A-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       181 ~D~Vih~Ag~~~~-~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +|+||||||.... ..    ..++++..+++|+.|+.++++++.    +.+ . +||++||...+..             
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-------------  164 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-------------  164 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-------------
Confidence            7999999997542 11    223577899999999888877763    333 4 9999999765421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.+|++.+.+++.++.+   .|+++++++||.|.++.
T Consensus       165 ---~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~  208 (272)
T 2nwq_A          165 ---YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF  208 (272)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence               122368999999999999999865   48999999999998864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.82  E-value=3.3e-19  Score=166.32  Aligned_cols=168  Identities=11%  Similarity=0.002  Sum_probs=126.5

Q ss_pred             CCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc------cccc--cCCCceEEeeCcccccc----
Q 019470          110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN------VMHH--FGNPNFELIRHDVVEPL----  177 (340)
Q Consensus       110 ~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~------~~~~--~~~~~~~~~~~D~~~~~----  177 (340)
                      ...++++|++|||||+|+||.+++++|+++|++|++++|+.+...+.      ....  ....++.++.+|+.++.    
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            34467889999999999999999999999999999999976542210      0111  12346788889997752    


Q ss_pred             --------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCC
Q 019470          178 --------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQH  240 (340)
Q Consensus       178 --------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~  240 (340)
                              +.++|+||||||......    ..++++..+++|+.++.++++++..    .+ .+||++||...+...   
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~---  195 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV---  195 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---
Confidence                    237999999999764332    2235778999999999999999843    33 389999997654221   


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeC
Q 019470          241 PQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYG  291 (340)
Q Consensus       241 ~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G  291 (340)
                                 +......|+.+|++.+.+++.++.+.  +++++++.||.+..
T Consensus       196 -----------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~  237 (346)
T 3kvo_A          196 -----------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIH  237 (346)
T ss_dssp             -----------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBC
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccc
Confidence                       01223689999999999999998874  89999999996433

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.82  E-value=2.7e-19  Score=163.05  Aligned_cols=197  Identities=12%  Similarity=-0.026  Sum_probs=137.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEe-CCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~-r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++ |+.+...+.....  ....++.++.+|+.+..            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            35678999999999999999999999999999999 7643222111110  11246778888887654            


Q ss_pred             -----------------cCCCCEEEEcccCCCCCC----C--------------cCChhhHHHHHHHHHHHHHHHHHH--
Q 019470          178 -----------------LLEVDQIYHLACPASPVH----Y--------------KFNPVKTIKTNVVGTLNMLGLAKR--  220 (340)
Q Consensus       178 -----------------~~~~D~Vih~Ag~~~~~~----~--------------~~~~~~~~~~Nv~g~~~ll~~a~~--  220 (340)
                                       +.++|++|||||......    .              .++++..+++|+.++.++++++..  
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             126899999999754322    1              334678899999999999988753  


Q ss_pred             --cC-------CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCc
Q 019470          221 --VG-------ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFN  288 (340)
Q Consensus       221 --~~-------~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~  288 (340)
                        .+       .+||++||...+..                ......|+.+|++.+.+++.++.+   .|+++++|+||.
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~~----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~  229 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQP----------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL  229 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             HhcCCCCCCCCcEEEEEechhhcCC----------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence              33       38999999765421                122368999999999999998876   489999999999


Q ss_pred             eeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          289 TYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       289 i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |..+. . ..    ..+...+.+..++   +     .-+...+|+|++++.
T Consensus       230 v~T~~-~-~~----~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~  266 (291)
T 1e7w_A          230 SVLVD-D-MP----PAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIF  266 (291)
T ss_dssp             BCCGG-G-SC----HHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHH
T ss_pred             ccCCc-c-CC----HHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHH
Confidence            97653 1 10    2223333332221   0     036789999998764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.81  E-value=1.4e-19  Score=161.20  Aligned_cols=157  Identities=17%  Similarity=0.131  Sum_probs=120.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~D~V  184 (340)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+ ....+. .++.++.+|+.++.            +.++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            579999999999999999999999999999996432221 111121 36788889987642            2369999


Q ss_pred             EEcccCCC-CCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPAS-PVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~-~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |||||... ...    ..++++..+++|+.|+.++++++.    +.+ .+||++||...+..                ..
T Consensus        79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~  142 (248)
T 3asu_A           79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP----------------YA  142 (248)
T ss_dssp             EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC----------------CT
T ss_pred             EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC----------------CC
Confidence            99999752 111    233577899999999999988875    344 49999999765421                12


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYG  291 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G  291 (340)
                      ....|+.+|++.+.+++.++.+.   |+++++++||.|.|
T Consensus       143 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g  182 (248)
T 3asu_A          143 GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG  182 (248)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence            23689999999999999998763   89999999999984

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.81  E-value=2.9e-19  Score=160.49  Aligned_cols=201  Identities=12%  Similarity=-0.018  Sum_probs=142.7

Q ss_pred             CCCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEeeCcccccc---------
Q 019470          112 LKRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~---------  177 (340)
                      +++++|+++||||+  |+||.+++++|+++|++|++++|+.....+.....+   ...++.++.+|+.+..         
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            35788999999999  999999999999999999999987654422111111   1356888889987742         


Q ss_pred             ---cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCC
Q 019470          178 ---LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ---~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                         +.++|+||||||......    ..++++..+++|+.++.++++++    ++.+ .+||++||...+...        
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  167 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--------  167 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC--------
Confidence               236899999999765433    23457789999999999999987    4444 499999997644211        


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhC--CcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~g--i~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                            .......|+.+|++.+.+++.++.+.+  ++++++.||.|..+....    ........+....         .
T Consensus       168 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~---------~  228 (267)
T 3gdg_A          168 ------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF----VPKETQQLWHSMI---------P  228 (267)
T ss_dssp             ------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG----SCHHHHHHHHTTS---------T
T ss_pred             ------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh----CCHHHHHHHHhcC---------C
Confidence                  001236799999999999999988753  899999999998764311    1122222222222         2


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+.+++|++++++.
T Consensus       229 ~~r~~~~~dva~~~~~  244 (267)
T 3gdg_A          229 MGRDGLAKELKGAYVY  244 (267)
T ss_dssp             TSSCEETHHHHHHHHH
T ss_pred             CCCCcCHHHHHhHhhe
Confidence            3347788999998764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.81  E-value=1.1e-19  Score=162.07  Aligned_cols=164  Identities=15%  Similarity=0.054  Sum_probs=122.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcc--cccc-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDV--VEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~--~~~~-----------  177 (340)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.+...+....  ......+.++.+|+  .+..           
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999975432221111  01123567777887  4431           


Q ss_pred             -cCCCCEEEEcccCCCCC-C----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPV-H----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~-~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                       +.++|++|||||..... .    ..++++..+++|+.|+.++++++    ++.+ .+||++||...+.           
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------  157 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ-----------  157 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS-----------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc-----------
Confidence             23699999999974321 1    22346789999999999999988    3444 3899999976542           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhhC--CcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG--VEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~g--i~~~ivRp~~i~G~  292 (340)
                           +......|+.+|++.+.+++.++.+.+  ++++++.||.|..+
T Consensus       158 -----~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~  200 (252)
T 3f1l_A          158 -----GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA  200 (252)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH
T ss_pred             -----CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc
Confidence                 112236899999999999999998753  89999999998653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.81  E-value=5.2e-19  Score=158.25  Aligned_cols=201  Identities=12%  Similarity=0.027  Sum_probs=143.0

Q ss_pred             CCCCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCcccc--cccccCCCceEEeeCccccc-----------
Q 019470          112 LKRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHFGNPNFELIRHDVVEP-----------  176 (340)
Q Consensus       112 ~~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~-----------  176 (340)
                      +++++|+++||||+|  +||.++++.|+++|++|++.+|+.....+.  ........++..+.+|+.++           
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            367899999999876  899999999999999999999975443221  12233445788899999775           


Q ss_pred             -ccCCCCEEEEcccCCCCCC--------CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCC
Q 019470          177 -LLLEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       177 -~~~~~D~Vih~Ag~~~~~~--------~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                       .+.++|++|||||......        ..+++...+++|+.++..+.+.+...-   .++|++||.....         
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~---------  152 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF---------  152 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS---------
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc---------
Confidence             2347999999999753221        112355677899999988888876543   2899999965321         


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDG  321 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  321 (340)
                             +......|+.+|++.+.+.+.++.+   +|+++++|.||.|-.+...  ...-.+.+...+.+..|+.     
T Consensus       153 -------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~--~~~~~~~~~~~~~~~~Pl~-----  218 (256)
T 4fs3_A          153 -------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAK--GVGGFNTILKEIKERAPLK-----  218 (256)
T ss_dssp             -------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGT--TCTTHHHHHHHHHHHSTTS-----
T ss_pred             -------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhh--hccCCHHHHHHHHhcCCCC-----
Confidence                   1122368999999999999999876   4899999999999776421  1111244555555544432     


Q ss_pred             ceeEccccHHHHHHHHHh
Q 019470          322 KQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       322 ~~~~~~v~v~Dva~a~~~  339 (340)
                          -+...+|++++++.
T Consensus       219 ----R~g~peevA~~v~f  232 (256)
T 4fs3_A          219 ----RNVDQVEVGKTAAY  232 (256)
T ss_dssp             ----SCCCHHHHHHHHHH
T ss_pred             ----CCcCHHHHHHHHHH
Confidence                25568899888764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.81  E-value=2.6e-19  Score=159.55  Aligned_cols=199  Identities=14%  Similarity=0.036  Sum_probs=139.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc-----c--------
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-----L--------  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-----~--------  178 (340)
                      +++|+++||||+|+||.+++++|+++|++|+++++......+.....+  ....+..+.+|+.+..     +        
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            467899999999999999999999999999987554333222221111  2346778888887641     1        


Q ss_pred             -----CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 -----LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 -----~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                           .++|++|||||.......    .+++++.+++|+.++.++++++...   +.+||++||...+..          
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~----------  154 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS----------  154 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC----------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC----------
Confidence                 139999999997543332    2346778999999999999999765   238999999765421          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                            ......|+.+|++.+.+++.++.+   .|+++++++||.+..+........  ..+........+         
T Consensus       155 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~---------  217 (255)
T 3icc_A          155 ------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD--PMMKQYATTISA---------  217 (255)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS--HHHHHHHHHTST---------
T ss_pred             ------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc--HHHHHhhhccCC---------
Confidence                  122368999999999999999876   489999999999988753211111  112222222222         


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                      ...+..++|++++++.
T Consensus       218 ~~~~~~~~dva~~~~~  233 (255)
T 3icc_A          218 FNRLGEVEDIADTAAF  233 (255)
T ss_dssp             TSSCBCHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHH
Confidence            2347789999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.81  E-value=3.3e-19  Score=161.08  Aligned_cols=165  Identities=13%  Similarity=0.054  Sum_probs=123.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---c---ccc--cCCCceEEeeCcccccc------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---V---MHH--FGNPNFELIRHDVVEPL------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~---~~~--~~~~~~~~~~~D~~~~~------  177 (340)
                      +++++|+++||||+|+||.+++++|+++|++|++++|+.....+.   +   ...  ....++.++.+|+.++.      
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            356789999999999999999999999999999999976532211   1   000  01346788999997752      


Q ss_pred             ------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCC
Q 019470          178 ------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       178 ------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~  242 (340)
                            +.++|++|||||......    ..++++..+++|+.++.++++++..    .+ .+||++||...+...     
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  156 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA-----  156 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH-----
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----
Confidence                  237999999999764433    2235778999999999999998754    33 489999997644210     


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCcee
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTY  290 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~  290 (340)
                               +......|+.+|++.+.+++.++.+   .|++++++.||.+.
T Consensus       157 ---------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v  198 (274)
T 3e03_A          157 ---------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI  198 (274)
T ss_dssp             ---------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred             ---------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence                     0112257999999999999999876   48999999999543

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.81  E-value=8.5e-20  Score=168.77  Aligned_cols=163  Identities=18%  Similarity=0.093  Sum_probs=122.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC---------CCccccccccc--CCCceEEeeCcccccc----
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF---------TGRKENVMHHF--GNPNFELIRHDVVEPL----  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~---------~~~~~~~~~~~--~~~~~~~~~~D~~~~~----  177 (340)
                      .+++|++|||||+|+||.+++++|+++|++|++++|+.         ....+.....+  ...++.++.+|+.+..    
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            46788999999999999999999999999999999862         11111111111  2346788889987742    


Q ss_pred             --------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc-----------CCeEEEEeCcccc
Q 019470          178 --------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV-----------GARFLLTSTSEVY  234 (340)
Q Consensus       178 --------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~-----------~~~~i~~SS~~v~  234 (340)
                              +.++|+||||||......    ..++++..+++|+.|+.++++++...           +.+||++||...+
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  183 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGL  183 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHc
Confidence                    237999999999765432    23357789999999999999887432           1389999996654


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       235 g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ..                ......|+.+|++.+.+++.++.+   .|+++++|+|| +..+
T Consensus       184 ~~----------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~  227 (322)
T 3qlj_A          184 QG----------------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR  227 (322)
T ss_dssp             HC----------------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred             cC----------------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence            21                112268999999999999999877   58999999999 6554

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.81  E-value=1.5e-19  Score=162.11  Aligned_cols=164  Identities=17%  Similarity=0.104  Sum_probs=123.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|+++||||+|+||.+++++|+++|++|++++|+.+...+..... ....++.++.+|+.++.            +.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999643322111111 01246788889987752            23


Q ss_pred             CCCEEEEcccCC-CCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPA-SPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~-~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|+||||||.. ....    ..++++..+++|+.++.++++++...    +. +||++||...+...            
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------  151 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP------------  151 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC------------
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC------------
Confidence            799999999975 2211    22357789999999999999887543    43 89999997654211            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                          .....|+.+|++.+.+++.++.+   .|+++++++||.|..+
T Consensus       152 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          152 ----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence                12267999999999999998865   4899999999998665

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.81  E-value=5.7e-19  Score=160.38  Aligned_cols=164  Identities=13%  Similarity=0.123  Sum_probs=122.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .+++++|+||||+|+||.+++++|+++|++|++++|+.+...+....  .....++.++.+|+.+..            +
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            36788999999999999999999999999999999965332211110  112236788899987742            2


Q ss_pred             CCCCEEEEc-ccCCCCCCC---cCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHL-ACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~-Ag~~~~~~~---~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|+|||| ||.......   .++++..+++|+.|+.++++++..    .+.+||++||...+..              
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--------------  170 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA--------------  170 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC--------------
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC--------------
Confidence            379999999 565432211   234677899999999999988754    3359999999765421              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhh-----CCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGA-----GVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~-----gi~~~ivRp~~i~G~  292 (340)
                        ......|+.+|++.+.+++.++.+.     ++++++++||.+.++
T Consensus       171 --~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~  215 (286)
T 1xu9_A          171 --YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  215 (286)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence              1223689999999999999887664     899999999998764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.81  E-value=3.2e-19  Score=158.04  Aligned_cols=154  Identities=18%  Similarity=0.101  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------c--C
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L--L  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~--~  179 (340)
                      .++|+++||||+|+||++++++|+++|++|++++|+.....         .....+.+|+.++.            +  .
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            35679999999999999999999999999999999754321         12456677776531            1  3


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|+||||||......     ..++++..+++|+.++.++++++...   +.+||++||...+..               
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  140 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG---------------  140 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---------------
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC---------------
Confidence            7999999999754322     22346788999999999999998764   248999999776521               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                       ......|+.+|++.+.+++.++.+     .|+++++++||.+-.+
T Consensus       141 -~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~  185 (241)
T 1dhr_A          141 -TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP  185 (241)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence             122368999999999999998865     3699999999998664

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.81  E-value=1.2e-18  Score=156.19  Aligned_cols=157  Identities=17%  Similarity=0.148  Sum_probs=119.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      +++++|++|||||+++||+++++.|+++|++|++++|+....   .      .....+.+|+.++            .+.
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---~------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---L------PEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---S------CTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---C------CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999964321   1      1122566777664            234


Q ss_pred             CCCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      ++|++|||||......      ..++|++.+++|+.++.++.+++.    +.+. ++|++||....-..           
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~-----------  146 (261)
T 4h15_A           78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL-----------  146 (261)
T ss_dssp             SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred             CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC-----------
Confidence            7999999999653321      234688999999999998887763    3443 89999996543110           


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                         + .....|+.+|++.+.+.+.++.+   +|+++++|.||.|-.+
T Consensus       147 ---~-~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~  189 (261)
T 4h15_A          147 ---P-ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE  189 (261)
T ss_dssp             ---T-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred             ---C-CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence               0 11257999999999999999876   4899999999999664

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.80  E-value=7.8e-19  Score=159.21  Aligned_cols=163  Identities=20%  Similarity=0.097  Sum_probs=123.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+|+||.+++++|+++|++|++++|+.+...+.. .. ...++.++.+|+.+..            +.+
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE-VA-HGGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HH-TBTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH-HH-cCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            467889999999999999999999999999999998644322211 11 1346788899997742            236


Q ss_pred             CCEEEEcccCCCCCCC---------cCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY---------KFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~---------~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +|++|||||.......         .+.++..+++|+.++.++++++..    .+.++|++||...+..           
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  148 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-----------  148 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-----------
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-----------
Confidence            8999999997532211         123677899999999999988743    3458999999765421           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~  293 (340)
                           ......|+.+|++.+.+++.++.+.  .++++++.||.|..+.
T Consensus       149 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~  191 (281)
T 3zv4_A          149 -----NGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL  191 (281)
T ss_dssp             -----SSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence                 1223679999999999999998874  4999999999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=3.8e-19  Score=159.91  Aligned_cols=159  Identities=18%  Similarity=0.152  Sum_probs=117.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc---ccccccCCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE---NVMHHFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...+   .+.......++.++.+|+.++.            +
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            456799999999999999999999999999999996433221   1111111236788899987742            2


Q ss_pred             CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHH----HHHcC----CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL----AKRVG----ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~----a~~~~----~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|+||||||...    .++++..+++|+.++.++.++    +++.+    .+||++||...+...             
T Consensus        85 g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  147 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-------------  147 (267)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-------------
T ss_pred             CCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-------------
Confidence            35899999999642    457889999999977665554    44432    389999998765321             


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHH--H---hhCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYH--R---GAGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~--~---~~gi~~~ivRp~~i~G~  292 (340)
                         .....|+.+|++.+.+++.++  .   ..|+++++++||.+.++
T Consensus       148 ---~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~  191 (267)
T 2gdz_A          148 ---AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA  191 (267)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence               122579999999999998752  2   35899999999999775

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.79  E-value=3.8e-19  Score=157.86  Aligned_cols=159  Identities=14%  Similarity=0.101  Sum_probs=116.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEE-e--CCCCCcccccccccCCCceEEeeCccccc-------ccCCCCEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVV-D--NFFTGRKENVMHHFGNPNFELIRHDVVEP-------LLLEVDQIY  185 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~~D~Vi  185 (340)
                      +|+++||||+|+||.+++++|+++|++|+++ +  |+.+...+ ....+  ...++.+.+..+.       .+.++|+||
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~-~~~~~--~~~~~~~~~~v~~~~~~~~~~~g~iD~lv   77 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQR-FESEN--PGTIALAEQKPERLVDATLQHGEAIDTIV   77 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHS--TTEEECCCCCGGGHHHHHGGGSSCEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHH-HHHHh--CCCcccCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999 5  76432221 11122  2344444333332       234699999


Q ss_pred             EcccCCCC---CC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          186 HLACPASP---VH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       186 h~Ag~~~~---~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      ||||....   ..    ..++++..+++|+.++.++++++.    +.+. +||++||...+..                .
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~  141 (244)
T 1zmo_A           78 SNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP----------------L  141 (244)
T ss_dssp             ECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC----------------C
T ss_pred             ECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC----------------C
Confidence            99997544   22    223577899999999999988874    4443 8999999775531                1


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      .....|+.+|++.+.+++.++.+   .|+++++++||.|..+.
T Consensus       142 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  184 (244)
T 1zmo_A          142 AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT  184 (244)
T ss_dssp             TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence            22367999999999999998876   48999999999997764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.79  E-value=4.5e-19  Score=157.39  Aligned_cols=164  Identities=20%  Similarity=0.136  Sum_probs=120.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc--cccCCCceEEeeCcc--ccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--HHFGNPNFELIRHDV--VEP------------  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~--~~~~~~~~~~~~~D~--~~~------------  176 (340)
                      .+++|+++||||+|+||.+++++|+++|++|++++|+.....+...  .........++..|+  .+.            
T Consensus        11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            4678899999999999999999999999999999997543222111  111223455555555  442            


Q ss_pred             ccCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCC
Q 019470          177 LLLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       177 ~~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      .+.++|+||||||......     ..+++++.+++|+.++.++++++.    +.+. +||++||...+.           
T Consensus        91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  159 (247)
T 3i1j_A           91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK-----------  159 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS-----------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC-----------
Confidence            1237999999999753322     224577899999999999999883    3343 899999976542           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~  292 (340)
                           +......|+.+|++.+.+++.++.+    .++++++++||.+..+
T Consensus       160 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~  204 (247)
T 3i1j_A          160 -----GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG  204 (247)
T ss_dssp             -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence                 1122368999999999999999876    3789999999988553

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.79  E-value=5.8e-18  Score=154.54  Aligned_cols=199  Identities=11%  Similarity=0.027  Sum_probs=131.2

Q ss_pred             CCCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCC----------CCcccccccccCCC----ceEEeeCc----
Q 019470          113 KRKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFF----------TGRKENVMHHFGNP----NFELIRHD----  172 (340)
Q Consensus       113 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~----------~~~~~~~~~~~~~~----~~~~~~~D----  172 (340)
                      ++++|+++||||+  |+||++++++|+++|++|++++|+.          ....+... .+...    .......|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSR-VLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGG-BCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhh-hhccccccccccccccceecc
Confidence            4678899999999  9999999999999999999998531          00101111 11100    01111111    


Q ss_pred             ----c----cc-------------c-------ccCCCCEEEEcccCCC--CCC----CcCChhhHHHHHHHHHHHHHHHH
Q 019470          173 ----V----VE-------------P-------LLLEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLA  218 (340)
Q Consensus       173 ----~----~~-------------~-------~~~~~D~Vih~Ag~~~--~~~----~~~~~~~~~~~Nv~g~~~ll~~a  218 (340)
                          +    .+             .       .+.++|++|||||...  ...    ..++++..+++|+.++.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                1    11             1       1236899999998642  111    22357789999999999999999


Q ss_pred             HHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCcee
Q 019470          219 KRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR-SCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTY  290 (340)
Q Consensus       219 ~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~  290 (340)
                      ...   +.+||++||...+...                ... ..|+.+|++.+.+++.++.+    +|+++++++||.|.
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~~----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~  227 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERII----------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLG  227 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCC----------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCB
T ss_pred             HHHhccCceEEEEeccccccCC----------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccc
Confidence            764   2489999997643210                111 46999999999999988765    59999999999999


Q ss_pred             CCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          291 GPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       291 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++...  .......+...+.+..++         ..+..++|+|++++.
T Consensus       228 T~~~~--~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~  265 (297)
T 1d7o_A          228 SRAAK--AIGFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAF  265 (297)
T ss_dssp             CCCSS--CCSHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHH
T ss_pred             cchhh--hccccHHHHHHhhccCCC---------CCCCCHHHHHHHHHH
Confidence            98642  112223333333332222         235689999998764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.78  E-value=9.3e-19  Score=160.18  Aligned_cols=181  Identities=18%  Similarity=0.068  Sum_probs=124.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCccccc-c------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEP-L------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~-~------------  177 (340)
                      ..++|+||||||+|+||.+++++|+++|++|++++|+.....+...+  .....++.++.+|+.+. .            
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999975433222211  11234688999999875 2            


Q ss_pred             cCCCCEEEEcccCCCCC----------------------------------CCcCChhhHHHHHHHHHHHHHHHHHH---
Q 019470          178 LLEVDQIYHLACPASPV----------------------------------HYKFNPVKTIKTNVVGTLNMLGLAKR---  220 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~----------------------------------~~~~~~~~~~~~Nv~g~~~ll~~a~~---  220 (340)
                      +.++|+||||||.....                                  ...+.++..+++|+.|+.++++++..   
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            23799999999975321                                  01233567799999999999888753   


Q ss_pred             -cC-CeEEEEeCcccccCCCCCC---------------------------CCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          221 -VG-ARFLLTSTSEVYGDPLQHP---------------------------QKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       221 -~~-~~~i~~SS~~v~g~~~~~~---------------------------~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                       .+ .+||++||...+.......                           ..+..............|+.||++.+.+++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence             33 4899999965432110000                           000000000111233679999999999999


Q ss_pred             HHHHhh-CCcEEEEEeCceeCCC
Q 019470          272 DYHRGA-GVEVRIARIFNTYGPR  293 (340)
Q Consensus       272 ~~~~~~-gi~~~ivRp~~i~G~~  293 (340)
                      .++.+. +++++++.||.|..+.
T Consensus       249 ~la~e~~~i~v~~v~PG~v~T~~  271 (311)
T 3o26_A          249 VLANKIPKFQVNCVCPGLVKTEM  271 (311)
T ss_dssp             HHHHHCTTSEEEEECCCSBCSGG
T ss_pred             HHHhhcCCceEEEecCCceecCC
Confidence            999875 7999999999998764

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.78  E-value=1.5e-18  Score=160.79  Aligned_cols=162  Identities=21%  Similarity=0.135  Sum_probs=120.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc--ccc-----cCCCceEEeeCcccccc-----c-----
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHH-----FGNPNFELIRHDVVEPL-----L-----  178 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~--~~~-----~~~~~~~~~~~D~~~~~-----~-----  178 (340)
                      +|+|+||||+|+||.+++++|+++|++|++++|.........  ...     ....++.++.+|+.+..     +     
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            568999999999999999999999999988887543322111  000     01246888999997742     1     


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|+||||||......    ..++++..+++|+.++.++++++    ++.+. +||++||...+..             
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~-------------  148 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-------------  148 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-------------
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-------------
Confidence            24999999999754322    22357789999999999999986    34454 9999999765421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         ......|+.||++.+.+++.++.+   .|+++++|+||.|..+.
T Consensus       149 ---~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          149 ---LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence               112268999999999999999875   59999999999998764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.77  E-value=2.4e-18  Score=154.05  Aligned_cols=162  Identities=14%  Similarity=0.034  Sum_probs=120.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc-------------c
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL-------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~-------------~  178 (340)
                      +++|++|||||+|+||.+++++|+++|++|++++|+.+...+.. ..+  ...++.++.+|+.++.             +
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA-QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            56789999999999999999999999999999998643222111 111  1246788889987641             3


Q ss_pred             CCCCEEEEccc--CC-------CCC--CCcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCC
Q 019470          179 LEVDQIYHLAC--PA-------SPV--HYKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQ  242 (340)
Q Consensus       179 ~~~D~Vih~Ag--~~-------~~~--~~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~  242 (340)
                      .++|++|||||  ..       .+.  ...++++..+++|+.++.++.+++.    +.+ .+||++||...+..      
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------  155 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------  155 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC------
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC------
Confidence            46899999995  21       111  1233577889999999988877664    344 48999999775421      


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                                 .+...|+.+|++.+.+++.++.+   +|+++++++||.|..+.
T Consensus       156 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          156 -----------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             -----------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence                       11267999999999999998865   48999999999998874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.77  E-value=1.5e-18  Score=156.18  Aligned_cols=161  Identities=14%  Similarity=0.065  Sum_probs=122.2

Q ss_pred             CCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          114 RKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       114 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +++|+++||||  +|+||.+++++|+++|++|++++|+.....+.....+ ..++.++.+|+.++.            +.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56789999999  9999999999999999999999996533212222222 235677888887642            22


Q ss_pred             ---CCCEEEEcccCCCC-----CC----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCC
Q 019470          180 ---EVDQIYHLACPASP-----VH----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKE  244 (340)
Q Consensus       180 ---~~D~Vih~Ag~~~~-----~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E  244 (340)
                         ++|++|||||....     ..    ..++++..+++|+.++.++++++...   +.+||++||...++.        
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~--------  155 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM--------  155 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC--------
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc--------
Confidence               79999999997541     11    22356788999999999999999764   238999998654321        


Q ss_pred             CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCC
Q 019470          245 TYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGP  292 (340)
Q Consensus       245 ~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~  292 (340)
                               .....|+.+|++.+.+++.++.+.   |+++++++||.|..+
T Consensus       156 ---------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          156 ---------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             ---------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence                     112679999999999999988764   899999999998664

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.77  E-value=2.2e-18  Score=166.30  Aligned_cols=165  Identities=15%  Similarity=0.030  Sum_probs=124.3

Q ss_pred             CCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------
Q 019470          110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       110 ~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      +...++++++|||||+|+||.++++.|+++|++|++++|+...  +.+........+.++.+|+.+..            
T Consensus       207 ~~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~--~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~  284 (454)
T 3u0b_A          207 WDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKRVADKVGGTALTLDVTADDAVDKITAHVTEH  284 (454)
T ss_dssp             TTSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH--HHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHH
Confidence            3345678999999999999999999999999999999985321  11111111124567888887642            


Q ss_pred             cCC-CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCccc-ccCCCCCCCCCCC
Q 019470          178 LLE-VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEV-YGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~-~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v-~g~~~~~~~~E~~  246 (340)
                      +.+ +|+||||||......    ..++++..+++|+.|+.++.+++...    + .+||++||... .+..         
T Consensus       285 ~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~---------  355 (454)
T 3u0b_A          285 HGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR---------  355 (454)
T ss_dssp             STTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT---------
T ss_pred             cCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC---------
Confidence            224 999999999865443    22357789999999999999999875    3 38999999653 3332         


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                              ....|+.+|...+.+++.++.+   .|+++++|.||.|..+.
T Consensus       356 --------g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  397 (454)
T 3u0b_A          356 --------GQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM  397 (454)
T ss_dssp             --------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence                    1268999999999999988865   48999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.77  E-value=2.9e-18  Score=153.38  Aligned_cols=164  Identities=13%  Similarity=-0.021  Sum_probs=123.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHh---CCCeEEEEeCCCCCcccccccc---cCCCceEEeeCcccccc---------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~l~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~---------  177 (340)
                      ++++|+++||||+|+||.+++++|++   +|++|++++|+.+...+.....   ....++.++.+|+.++.         
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999   8999999999653322111110   01346788899987742         


Q ss_pred             -----cCCCC--EEEEcccCCCCC-------CCcCChhhHHHHHHHHHHHHHHHHHHc------C-CeEEEEeCcccccC
Q 019470          178 -----LLEVD--QIYHLACPASPV-------HYKFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSEVYGD  236 (340)
Q Consensus       178 -----~~~~D--~Vih~Ag~~~~~-------~~~~~~~~~~~~Nv~g~~~ll~~a~~~------~-~~~i~~SS~~v~g~  236 (340)
                           ..++|  ++|||||.....       ...++++..+++|+.|+.++++++...      + .+||++||...+. 
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-  161 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-
Confidence                 12468  999999975431       123457889999999999999998653      2 2799999977652 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh-CCcEEEEEeCceeCC
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-GVEVRIARIFNTYGP  292 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~-gi~~~ivRp~~i~G~  292 (340)
                                     +......|+.+|++.+.+++.++.+. +++++++.||.+-.+
T Consensus       162 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  203 (259)
T 1oaa_A          162 ---------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             ---------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             ---------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence                           11223689999999999999998875 599999999988543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.76  E-value=4e-18  Score=157.33  Aligned_cols=160  Identities=16%  Similarity=0.127  Sum_probs=113.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC--------CcccccccccCCCceEEeeCccccc-------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT--------GRKENVMHHFGNPNFELIRHDVVEP-------  176 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~--------~~~~~~~~~~~~~~~~~~~~D~~~~-------  176 (340)
                      +++++|+++||||+|+||.+++++|+++|++|+++++...        ...+.....+...... ..+|+.+.       
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-AVANYDSVEAGEKLV   83 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHH
Confidence            4567889999999999999999999999999999876421        0001111111000001 11333322       


Q ss_pred             -----ccCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCc-ccccCCCCCC
Q 019470          177 -----LLLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTS-EVYGDPLQHP  241 (340)
Q Consensus       177 -----~~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~-~v~g~~~~~~  241 (340)
                           .+.++|+||||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||. +.++..    
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~----  159 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----  159 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC----
Confidence                 1347999999999765432    23357789999999999998887    34454 99999995 445432    


Q ss_pred             CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCce
Q 019470          242 QKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNT  289 (340)
Q Consensus       242 ~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i  289 (340)
                                   ....|+.+|++.+.+++.++.+   .|+++++++||.+
T Consensus       160 -------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~  197 (319)
T 1gz6_A          160 -------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  197 (319)
T ss_dssp             -------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence                         1268999999999999999876   4899999999987

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.73  E-value=3.3e-18  Score=158.44  Aligned_cols=169  Identities=13%  Similarity=0.061  Sum_probs=119.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCCc-cc----ccccccCCCceEEeeCcccccccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGR-KE----NVMHHFGNPNFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~~-~~----~~~~~~~~~~~~~~~~D~~~~~~~~~D~  183 (340)
                      +|+|+||||+||||++++..|+++|+       +|+++|+..... ..    .+.+.......++...+...+.+.++|+
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~   83 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCE
Confidence            35899999999999999999999996       899999853100 01    1111000111244443334456789999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEeCcc-cccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      |||+||....  ...+...+++.|+.++.++++++++.+ .  +|+++|+.. +..     +..++.   .....+.+.|
T Consensus        84 Vih~Ag~~~~--~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~---~~~~~p~~~y  153 (327)
T 1y7t_A           84 ALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKN---APGLNPRNFT  153 (327)
T ss_dssp             EEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHT---CTTSCGGGEE
T ss_pred             EEECCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHH---cCCCChhhee
Confidence            9999997542  235677899999999999999999975 3  777777643 110     111110   0123455679


Q ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC
Q 019470          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~  294 (340)
                      +.+|...|++...+++.+|++++++|+++|||++.
T Consensus       154 g~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          154 AMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             ECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             ccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            99999999999999888899999999999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.72  E-value=2.9e-17  Score=159.82  Aligned_cols=163  Identities=19%  Similarity=0.279  Sum_probs=120.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCCCcc--ccccccc--CCCceEEeeCcccccc-----c-----
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRK--ENVMHHF--GNPNFELIRHDVVEPL-----L-----  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~-----~-----  178 (340)
                      ..+++||||||+|+||.++++.|+++|++ |++++|+.....  +.+...+  ...++.++.+|+.++.     +     
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            35679999999999999999999999995 999999754211  1111111  2346888999997742     2     


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCc-ccccCCCCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~-~v~g~~~~~~~~E~~~~~~~  251 (340)
                       ..+|+||||||......    ..+++...+++|+.|+.++.++++..+. +||++||. +++|..+.            
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~------------  371 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL------------  371 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC------------
Confidence             24699999999765432    2234667889999999999999988875 89999995 45554322            


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~  294 (340)
                           ..|+.+|...+.+.+.+. ..|+++++|+||.+.+.++
T Consensus       372 -----~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm  408 (486)
T 2fr1_A          372 -----GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGM  408 (486)
T ss_dssp             -----TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC----
T ss_pred             -----HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcc
Confidence                 579999999999887764 4599999999999988653

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.71  E-value=7.9e-17  Score=157.47  Aligned_cols=162  Identities=18%  Similarity=0.209  Sum_probs=122.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc--ccccccc--CCCceEEeeCcccccc-----c--CCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK--ENVMHHF--GNPNFELIRHDVVEPL-----L--LEVD  182 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~-----~--~~~D  182 (340)
                      .+++||||||+|+||.+++++|+++|+ +|++++|+.....  +.+...+  ...++.++.+|+.+..     +  .++|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            567999999999999999999999999 6888898753211  1111111  2346888999998752     2  3499


Q ss_pred             EEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHc-CC-eEEEEeCc-ccccCCCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTS-EVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~-~~-~~i~~SS~-~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      +||||||.......    .+.++..+++|+.|+.++.+++... +. +||++||. +++|..+                 
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g-----------------  400 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG-----------------  400 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT-----------------
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC-----------------
Confidence            99999997654321    2346678899999999999998876 54 89999996 4555422                 


Q ss_pred             CChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC
Q 019470          256 RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~  294 (340)
                      ...|+.+|...+.+++.+. ..|+++++++||.+.+.++
T Consensus       401 ~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm  438 (511)
T 2z5l_A          401 QGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGM  438 (511)
T ss_dssp             BHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTC
T ss_pred             CHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcc
Confidence            2689999999999998764 4699999999999854443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.68  E-value=3.4e-16  Score=144.10  Aligned_cols=164  Identities=13%  Similarity=0.016  Sum_probs=112.3

Q ss_pred             CCCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCCC----------CcccccccccCCC---ceEEeeC------
Q 019470          113 KRKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFFT----------GRKENVMHHFGNP---NFELIRH------  171 (340)
Q Consensus       113 ~~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~~----------~~~~~~~~~~~~~---~~~~~~~------  171 (340)
                      ++++|+++||||  +|+||.+++++|+++|++|++++|++.          ...+.........   ...++..      
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence            467889999999  899999999999999999999986420          0000010000000   0122222      


Q ss_pred             ------cccc-------------c-------ccCCCCEEEEcccCCC--CCC----CcCChhhHHHHHHHHHHHHHHHHH
Q 019470          172 ------DVVE-------------P-------LLLEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAK  219 (340)
Q Consensus       172 ------D~~~-------------~-------~~~~~D~Vih~Ag~~~--~~~----~~~~~~~~~~~Nv~g~~~ll~~a~  219 (340)
                            |+.+             .       .+.++|++|||||...  ...    ..++++..+++|+.++.++++++.
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                  2221             1       1236999999999642  111    223577899999999999999986


Q ss_pred             Hc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeC
Q 019470          220 RV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR-SCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYG  291 (340)
Q Consensus       220 ~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G  291 (340)
                      ..   +.+||++||...+...                ... ..|+.+|++.+.+++.++.+    +|+++++|+||.|..
T Consensus       166 ~~m~~~g~Iv~isS~~~~~~~----------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  229 (315)
T 2o2s_A          166 PIMNEGGSAVTLSYLAAERVV----------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS  229 (315)
T ss_dssp             TTEEEEEEEEEEEEGGGTSCC----------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCC
T ss_pred             HHHhcCCEEEEEecccccccC----------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccc
Confidence            54   2489999997644210                111 36999999999999988765    489999999999866


Q ss_pred             C
Q 019470          292 P  292 (340)
Q Consensus       292 ~  292 (340)
                      +
T Consensus       230 ~  230 (315)
T 2o2s_A          230 R  230 (315)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.68  E-value=1.8e-16  Score=146.20  Aligned_cols=165  Identities=14%  Similarity=0.013  Sum_probs=100.6

Q ss_pred             CCCCCeEEEEcC--chHHHHHHHHHHHhCCCeEEEEeCCC-----------CCccc----------ccccccCCC-----
Q 019470          113 KRKGLRIVVTGG--AGFVGSHLVDRLIARGDSVIVVDNFF-----------TGRKE----------NVMHHFGNP-----  164 (340)
Q Consensus       113 ~~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~l~r~~-----------~~~~~----------~~~~~~~~~-----  164 (340)
                      ++++|++|||||  +|+||.++++.|+++|++|++++|++           ....+          .....+...     
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            467789999999  89999999999999999999998642           00000          000000000     


Q ss_pred             ceEEeeCc------------ccc-------------c-------ccCCCCEEEEcccCCC--CCC----CcCChhhHHHH
Q 019470          165 NFELIRHD------------VVE-------------P-------LLLEVDQIYHLACPAS--PVH----YKFNPVKTIKT  206 (340)
Q Consensus       165 ~~~~~~~D------------~~~-------------~-------~~~~~D~Vih~Ag~~~--~~~----~~~~~~~~~~~  206 (340)
                      ...++..|            +.+             .       .+.++|++|||||...  ...    ..++++..+++
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v  165 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS  165 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence            01222222            111             1       1236899999999642  111    22357789999


Q ss_pred             HHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHh----hC
Q 019470          207 NVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR-SCYDEGKRTAETLTMDYHRG----AG  278 (340)
Q Consensus       207 Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~-~~Y~~sK~~~E~~v~~~~~~----~g  278 (340)
                      |+.++.++++++...   +.+||++||...+..                .... ..|+.+|++.+.+++.++.+    +|
T Consensus       166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------------~~~~~~~Y~asKaal~~l~~~la~el~~~~g  229 (319)
T 2ptg_A          166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKV----------------IPGYGGGMSSAKAALESDCRTLAFEAGRARA  229 (319)
T ss_dssp             HTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHhcCceEEEEeccccccc----------------cCccchhhHHHHHHHHHHHHHHHHHhccccC
Confidence            999999999998764   248999999764321                0111 46999999999999988765    58


Q ss_pred             CcEEEEEeCceeCCC
Q 019470          279 VEVRIARIFNTYGPR  293 (340)
Q Consensus       279 i~~~ivRp~~i~G~~  293 (340)
                      +++++|+||.|..+.
T Consensus       230 Irvn~v~PG~v~T~~  244 (319)
T 2ptg_A          230 VRVNCISAGPLKSRA  244 (319)
T ss_dssp             CEEEEEEECCCC---
T ss_pred             eeEEEEeeCCccChh
Confidence            999999999997763

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.67  E-value=6.4e-16  Score=150.16  Aligned_cols=161  Identities=15%  Similarity=0.179  Sum_probs=122.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc--ccccccc--CCCceEEeeCcccccc-----c------C
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK--ENVMHHF--GNPNFELIRHDVVEPL-----L------L  179 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~-----~------~  179 (340)
                      ++++|||||+|+||.++++.|+++|+ +|++++|+.....  +.+...+  ...++.++.+|+.++.     +      .
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999 7888888632211  1111111  2357889999997742     1      2


Q ss_pred             CCCEEEEcccCC-CCCC----CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPA-SPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       180 ~~D~Vih~Ag~~-~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~  252 (340)
                      ++|+||||||.. ....    ..++++..+++|+.|+.++.+++...+. +||++||.. ++|..+              
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g--------------  384 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG--------------  384 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT--------------
T ss_pred             CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC--------------
Confidence            589999999976 2222    2234678999999999999999988875 899999954 554322              


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~  294 (340)
                         ...|+.+|...+.+.+.+. ..|+++++|.||.+.+.++
T Consensus       385 ---~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          385 ---QPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC
T ss_pred             ---cHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCcc
Confidence               2689999999999988764 4699999999999987765

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.64  E-value=6.1e-16  Score=154.65  Aligned_cols=160  Identities=19%  Similarity=0.125  Sum_probs=107.1

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC---------CCCcccccccccCCCceEEeeCccccc-----
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---------FTGRKENVMHHFGNPNFELIRHDVVEP-----  176 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~-----  176 (340)
                      ..++++|++|||||+|+||++++++|+++|++|++++|.         ..... .....+...... ..+|+.+.     
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~-~~~~~i~~~~~~-~~~D~~d~~~~~~   91 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAAD-IVVDEIRKAGGE-AVADYNSVIDGAK   91 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHH-HHHHHHHHTTCC-EEECCCCGGGHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHH-HHHHHHHHhCCe-EEEEeCCHHHHHH
Confidence            346789999999999999999999999999999999872         11111 111111000001 11233221     


Q ss_pred             -------ccCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcc-cccCCCC
Q 019470          177 -------LLLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSE-VYGDPLQ  239 (340)
Q Consensus       177 -------~~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~-v~g~~~~  239 (340)
                             .+.++|++|||||......    ..++++..+++|+.|+.++++++    ++.+. +||++||.. .++..  
T Consensus        92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~--  169 (613)
T 3oml_A           92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF--  169 (613)
T ss_dssp             HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT--
T ss_pred             HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC--
Confidence                   1236999999999865433    23457889999999999999988    44443 899999955 44321  


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCce
Q 019470          240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNT  289 (340)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i  289 (340)
                                     ....|+.+|++.+.+++.++.+.   |+++++|.||.+
T Consensus       170 ---------------~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          170 ---------------GQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             ---------------CChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence                           22679999999999999998764   899999999964

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.62  E-value=7.5e-15  Score=135.92  Aligned_cols=162  Identities=7%  Similarity=-0.053  Sum_probs=113.6

Q ss_pred             CCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCC---------C---Cccccccc-ccCCCceEEeeCccccc--c
Q 019470          115 KGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFF---------T---GRKENVMH-HFGNPNFELIRHDVVEP--L  177 (340)
Q Consensus       115 ~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~---------~---~~~~~~~~-~~~~~~~~~~~~D~~~~--~  177 (340)
                      ++|+++||||++  +||.+++++|+++|++|++.++.+         +   ........ ......+.++.+|+.+.  .
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            357999999875  999999999999999999777543         1   11111110 11112355666666443  1


Q ss_pred             ------------------------------cCCCCEEEEcccCCC--CCC----CcCChhhHHHHHHHHHHHHHHHHHHc
Q 019470          178 ------------------------------LLEVDQIYHLACPAS--PVH----YKFNPVKTIKTNVVGTLNMLGLAKRV  221 (340)
Q Consensus       178 ------------------------------~~~~D~Vih~Ag~~~--~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~  221 (340)
                                                    +.++|++|||||...  ...    ..++++..+++|+.|+.++++++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                                          135899999999642  111    22357889999999999999998654


Q ss_pred             C---CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeCC
Q 019470          222 G---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS-CYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       222 ~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G~  292 (340)
                      =   .+||++||...+..                ..... .|+.||++.+.+++.++.+    +|++++++.||.|..+
T Consensus       161 m~~~g~Iv~isS~~~~~~----------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKV----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEEEECGGGTSC----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HhhCCeEEEEeCccccCC----------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            2   38999999764311                11123 7999999999999988764    5899999999998764

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.61  E-value=2e-15  Score=148.03  Aligned_cols=158  Identities=12%  Similarity=0.153  Sum_probs=116.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEE-eCCCCC------------ccccccccc--CCCceEEeeCcccccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVV-DNFFTG------------RKENVMHHF--GNPNFELIRHDVVEPL  177 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l-~r~~~~------------~~~~~~~~~--~~~~~~~~~~D~~~~~  177 (340)
                      .+++++|||||+|+||.++++.|+++|++ |+++ +|+...            ..+.+...+  ...++.++.+|+.+..
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            35789999999999999999999999997 5555 776422            111111111  1346889999997742


Q ss_pred             -----------cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC-----C-eEEEEeCcc-ccc
Q 019470          178 -----------LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG-----A-RFLLTSTSE-VYG  235 (340)
Q Consensus       178 -----------~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~-----~-~~i~~SS~~-v~g  235 (340)
                                 ...+|+||||||......    ..++++..+++|+.|+.++.+++....     . +||++||.. ++|
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence                       235899999999765433    223467899999999999999997765     4 899999955 443


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCce
Q 019470          236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNT  289 (340)
Q Consensus       236 ~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i  289 (340)
                      ..+                 ...|+.+|...+.+.+.+. ..|+++++|.||.+
T Consensus       409 ~~g-----------------~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~  444 (525)
T 3qp9_A          409 GAG-----------------QGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW  444 (525)
T ss_dssp             CTT-----------------CHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB
T ss_pred             CCC-----------------CHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc
Confidence            322                 2679999999999876553 35999999999999

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.58  E-value=1.1e-14  Score=145.01  Aligned_cols=157  Identities=17%  Similarity=0.167  Sum_probs=115.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc-ccccccccCCCceEEeeCcc-ccc---------ccCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR-KENVMHHFGNPNFELIRHDV-VEP---------LLLEV  181 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~-~~~~~~~~~~~~~~~~~~D~-~~~---------~~~~~  181 (340)
                      ++++|+++||||+++||+++++.|+++|++|++.++..... .+.+..  ....+..+.+|+ .+.         .+.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~--~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i  396 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA--AGGEAWPDQHDVAKDSEAIIKNVIDKYGTI  396 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH--TTCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh--cCCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence            56789999999999999999999999999999988632111 111111  123455666777 321         23469


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcc-cccCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSE-VYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~  251 (340)
                      |++|||||......    ..++++..+++|+.|+.++.+++.    +.+ .+||++||.. .++..              
T Consensus       397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~--------------  462 (604)
T 2et6_A          397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF--------------  462 (604)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT--------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC--------------
Confidence            99999999764432    234588899999999999888763    334 3899999965 33321              


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFN  288 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~  288 (340)
                         ....|+.||++.+.+.+.++.+   +|+++++|.||.
T Consensus       463 ---~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~  499 (604)
T 2et6_A          463 ---GQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA  499 (604)
T ss_dssp             ---TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             ---CChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence               1267999999999999999876   489999999993

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.55  E-value=2.5e-14  Score=142.56  Aligned_cols=158  Identities=15%  Similarity=0.106  Sum_probs=109.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC--------CcccccccccC--CCceEEeeCcccc-------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT--------GRKENVMHHFG--NPNFELIRHDVVE-------  175 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~--------~~~~~~~~~~~--~~~~~~~~~D~~~-------  175 (340)
                      ++++|+++||||+++||+++++.|+++|++|++.+|...        ...+.....+.  ...+.....|..+       
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET   84 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH
Confidence            467889999999999999999999999999999987541        11111111111  1111111122211       


Q ss_pred             --cccCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcc-cccCCCCCCCC
Q 019470          176 --PLLLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSE-VYGDPLQHPQK  243 (340)
Q Consensus       176 --~~~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~-v~g~~~~~~~~  243 (340)
                        ..+.++|++|||||......    ..++++..+++|+.|+.++.+++.    +.+ .+||++||.. .++...     
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~-----  159 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG-----  159 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC-----
Confidence              12346999999999754332    234588899999999999888763    334 3899999954 333221     


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeC
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIF  287 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~  287 (340)
                                  ...|+.+|++.+.+.+.++.+   +|+++++|.|+
T Consensus       160 ------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          160 ------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             ------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence                        257999999999999999876   48999999997

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.54  E-value=1e-13  Score=129.70  Aligned_cols=165  Identities=13%  Similarity=0.015  Sum_probs=117.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCCCCcccc-----------cccc--cCCCceEEeeCccccc---
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKEN-----------VMHH--FGNPNFELIRHDVVEP---  176 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~l~r~~~~~~~~-----------~~~~--~~~~~~~~~~~D~~~~---  176 (340)
                      ..+|++|||||+++||.++++.|++ +|++|+++++........           ....  .....+..+.+|+.++   
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4577999999999999999999999 999999998865443211           1111  1234577888999775   


Q ss_pred             ---------ccCCCCEEEEcccCC---------------CCC-----------------------CCcCChhhHHHHHHH
Q 019470          177 ---------LLLEVDQIYHLACPA---------------SPV-----------------------HYKFNPVKTIKTNVV  209 (340)
Q Consensus       177 ---------~~~~~D~Vih~Ag~~---------------~~~-----------------------~~~~~~~~~~~~Nv~  209 (340)
                               .+.++|++|||||..               .+.                       ...++++..+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence                     234699999999963               111                       123357788888888


Q ss_pred             HHH-HHHHHHHHc-----CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---h-CC
Q 019470          210 GTL-NMLGLAKRV-----GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---A-GV  279 (340)
Q Consensus       210 g~~-~ll~~a~~~-----~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~-gi  279 (340)
                      +.. .+++++...     +.++|++||....-.              .+......|+.+|...+.+.+.++.+   . |+
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~--------------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GI  270 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT--------------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGG  270 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCe
Confidence            776 556655432     248999999653211              11111267999999999999999876   4 89


Q ss_pred             cEEEEEeCceeCC
Q 019470          280 EVRIARIFNTYGP  292 (340)
Q Consensus       280 ~~~ivRp~~i~G~  292 (340)
                      +++++.||.|-.+
T Consensus       271 RVNaVaPG~i~T~  283 (405)
T 3zu3_A          271 DARVSVLKAVVSQ  283 (405)
T ss_dssp             EEEEEECCCCCCH
T ss_pred             EEEEEEeCCCcCc
Confidence            9999999998765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.52  E-value=7.7e-14  Score=131.61  Aligned_cols=166  Identities=14%  Similarity=0.012  Sum_probs=117.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCCCCcccc-----------cccc--cCCCceEEeeCccccc---
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRKEN-----------VMHH--FGNPNFELIRHDVVEP---  176 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~l~r~~~~~~~~-----------~~~~--~~~~~~~~~~~D~~~~---  176 (340)
                      ..+|++|||||+++||.++++.|++ +|++|++++|..+...+.           ....  .....+..+.+|+.++   
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3478999999999999999999999 999999999875543221           0011  1234577888998774   


Q ss_pred             ---------cc-CCCCEEEEcccCC-------------C--CC-----------------------CCcCChhhHHHHHH
Q 019470          177 ---------LL-LEVDQIYHLACPA-------------S--PV-----------------------HYKFNPVKTIKTNV  208 (340)
Q Consensus       177 ---------~~-~~~D~Vih~Ag~~-------------~--~~-----------------------~~~~~~~~~~~~Nv  208 (340)
                               .+ .++|++|||||..             .  +.                       ...++++..+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence                     24 5799999999862             1  11                       12234666777777


Q ss_pred             HHHH-HHHHHHHHcC-----CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCC
Q 019470          209 VGTL-NMLGLAKRVG-----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGV  279 (340)
Q Consensus       209 ~g~~-~ll~~a~~~~-----~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi  279 (340)
                      .+.. .+++++....     .++|++||....-.              .+......|+.+|++.+.+.+.++.+   +|+
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~--------------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GI  284 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEIT--------------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGG  284 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG--------------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCccCE
Confidence            6664 5666654432     37999999653210              00001157999999999999999876   489


Q ss_pred             cEEEEEeCceeCCC
Q 019470          280 EVRIARIFNTYGPR  293 (340)
Q Consensus       280 ~~~ivRp~~i~G~~  293 (340)
                      +++++.||.|-.+.
T Consensus       285 RVNaVaPG~i~T~~  298 (422)
T 3s8m_A          285 GANVAVLKSVVTQA  298 (422)
T ss_dssp             EEEEEEECCCCCTT
T ss_pred             EEEEEEcCCCcChh
Confidence            99999999998764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.49  E-value=4.9e-13  Score=144.35  Aligned_cols=161  Identities=19%  Similarity=0.171  Sum_probs=116.1

Q ss_pred             CCCCCCeEEEEcCchH-HHHHHHHHHHhCCCeEEEEeCCCCCcc-c---ccccccC--CCceEEeeCcccccc-------
Q 019470          112 LKRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVDNFFTGRK-E---NVMHHFG--NPNFELIRHDVVEPL-------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~---~~~~~~~--~~~~~~~~~D~~~~~-------  177 (340)
                      ++++++++|||||+|+ ||.++++.|+++|++|+++++...... +   .+...+.  ..++.++.+|+.+..       
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            3567899999999999 999999999999999999864432221 1   1111111  346788899997641       


Q ss_pred             --------cC-CCCEEEEcccCCCCC-C---C---cCChhhHHHHHHHHHHHHHHHHHHc------C-CeEEEEeCcccc
Q 019470          178 --------LL-EVDQIYHLACPASPV-H---Y---KFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSEVY  234 (340)
Q Consensus       178 --------~~-~~D~Vih~Ag~~~~~-~---~---~~~~~~~~~~Nv~g~~~ll~~a~~~------~-~~~i~~SS~~v~  234 (340)
                              +. ++|+||||||..... .   .   .++++.++++|+.++.+++++++..      + .+||++||...+
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence                    23 599999999976443 1   1   2346789999999999998774321      2 279999996532


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh-h--CCcEEEEEeCcee
Q 019470          235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-A--GVEVRIARIFNTY  290 (340)
Q Consensus       235 g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-~--gi~~~ivRp~~i~  290 (340)
                      ..                  ....|+.+|++.+.+++.+..+ .  ++++++|.||.+-
T Consensus       808 ~g------------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~  848 (1878)
T 2uv9_A          808 FG------------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR  848 (1878)
T ss_dssp             SS------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred             cC------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence            11                  1257999999999998766543 1  3999999999987

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.46  E-value=5.1e-13  Score=144.52  Aligned_cols=162  Identities=18%  Similarity=0.162  Sum_probs=118.3

Q ss_pred             CCCCCCeEEEEcCchH-HHHHHHHHHHhCCCeEEEEe-CCCCCccc---cccccc--CCCceEEeeCcccccc-------
Q 019470          112 LKRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVD-NFFTGRKE---NVMHHF--GNPNFELIRHDVVEPL-------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~l~-r~~~~~~~---~~~~~~--~~~~~~~~~~D~~~~~-------  177 (340)
                      +.+++|++|||||+++ ||.++++.|+++|++|++++ |+.....+   .+...+  ...++.++.+|+.+..       
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3577899999999998 99999999999999999985 43322211   111111  1346788899987641       


Q ss_pred             ----------cC-CCCEEEEcccCCCCC-CC------cCChhhHHHHHHHHHHHHHHHHHHcC-------CeEEEEeCcc
Q 019470          178 ----------LL-EVDQIYHLACPASPV-HY------KFNPVKTIKTNVVGTLNMLGLAKRVG-------ARFLLTSTSE  232 (340)
Q Consensus       178 ----------~~-~~D~Vih~Ag~~~~~-~~------~~~~~~~~~~Nv~g~~~ll~~a~~~~-------~~~i~~SS~~  232 (340)
                                +. ++|+||||||..... ..      .++++..+++|+.++.+++++++...       .+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                      22 599999999976443 21      23467899999999999999885332       2799999965


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHHHhhC--CcEEEEEeCceeC
Q 019470          233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL-TMDYHRGAG--VEVRIARIFNTYG  291 (340)
Q Consensus       233 v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~-v~~~~~~~g--i~~~ivRp~~i~G  291 (340)
                      .+..                  ....|+.+|++.+.+ .+.++.+.+  +++++|.||.|.|
T Consensus       831 g~~g------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t  874 (1887)
T 2uv8_A          831 GTFG------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  874 (1887)
T ss_dssp             TCSS------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred             hccC------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence            3211                  125799999999998 666665433  9999999999985

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.45  E-value=1e-12  Score=124.64  Aligned_cols=165  Identities=9%  Similarity=-0.115  Sum_probs=114.8

Q ss_pred             CCCCeEEEEcCchHHHHH--HHHHHHhCCCeEEEEeCCCCCcc-----------cccccc--cCCCceEEeeCcccccc-
Q 019470          114 RKGLRIVVTGGAGFVGSH--LVDRLIARGDSVIVVDNFFTGRK-----------ENVMHH--FGNPNFELIRHDVVEPL-  177 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~--l~~~Ll~~G~~V~~l~r~~~~~~-----------~~~~~~--~~~~~~~~~~~D~~~~~-  177 (340)
                      ..+|++|||||+++||.+  +++.|.++|++|++++|......           +.+...  .....+..+.+|+.++. 
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            467799999999999999  99999999999999998754322           111111  12346788889997742 


Q ss_pred             -----------cCCCCEEEEcccCC-------------C--CC-----------------------CCcCChhhHHHHHH
Q 019470          178 -----------LLEVDQIYHLACPA-------------S--PV-----------------------HYKFNPVKTIKTNV  208 (340)
Q Consensus       178 -----------~~~~D~Vih~Ag~~-------------~--~~-----------------------~~~~~~~~~~~~Nv  208 (340)
                                 +.++|++|||||..             .  +.                       ...++++..+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence                       34699999999963             0  10                       01223556666766


Q ss_pred             HHHH-HHHHHHHHcC-----CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh----hC
Q 019470          209 VGTL-NMLGLAKRVG-----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----AG  278 (340)
Q Consensus       209 ~g~~-~ll~~a~~~~-----~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~g  278 (340)
                      .+.. .+++++...+     .++|++||.+..-.              .+......|+.+|++.+.+.+.++.+    .|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~--------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~G  283 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT--------------YKIYREGTIGIAKKDLEDKAKLINEKLNRVIG  283 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC--------------CCccccHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            6555 5566655433     37999999653210              11111268999999999999998864    58


Q ss_pred             CcEEEEEeCceeCC
Q 019470          279 VEVRIARIFNTYGP  292 (340)
Q Consensus       279 i~~~ivRp~~i~G~  292 (340)
                      ++++++.||.|-.+
T Consensus       284 IrVN~V~PG~v~T~  297 (418)
T 4eue_A          284 GRAFVSVNKALVTK  297 (418)
T ss_dssp             CEEEEEECCCCCCH
T ss_pred             eEEEEEECCcCcCh
Confidence            99999999998765

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.43  E-value=2.3e-13  Score=143.04  Aligned_cols=162  Identities=19%  Similarity=0.169  Sum_probs=115.8

Q ss_pred             CCCCCCeEEEEcCchH-HHHHHHHHHHhCCCeEEEEe-CCCCCcccc---cccccC--CCceEEeeCcccccc-------
Q 019470          112 LKRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVD-NFFTGRKEN---VMHHFG--NPNFELIRHDVVEPL-------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~l~-r~~~~~~~~---~~~~~~--~~~~~~~~~D~~~~~-------  177 (340)
                      +++++|++|||||+|+ ||.++++.|+++|++|++++ |+.....+.   +.....  ..++.++.+|+.+..       
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4567889999999998 99999999999999999984 543322211   111111  246788889987641       


Q ss_pred             ----------cC-CCCEEEEcccCCCCC-CC------cCChhhHHHHHHHHHHHHHHHHHHc------C-CeEEEEeCcc
Q 019470          178 ----------LL-EVDQIYHLACPASPV-HY------KFNPVKTIKTNVVGTLNMLGLAKRV------G-ARFLLTSTSE  232 (340)
Q Consensus       178 ----------~~-~~D~Vih~Ag~~~~~-~~------~~~~~~~~~~Nv~g~~~ll~~a~~~------~-~~~i~~SS~~  232 (340)
                                +. ++|+||||||..... ..      .++++..+++|+.++.+++++++..      + .+||++||..
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence                      22 599999999976443 11      2346789999999999999988332      1 2799999965


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHHHhh--CCcEEEEEeCceeC
Q 019470          233 VYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL-TMDYHRGA--GVEVRIARIFNTYG  291 (340)
Q Consensus       233 v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~-v~~~~~~~--gi~~~ivRp~~i~G  291 (340)
                      ....                  ....|+.+|++.+.+ .+.++++.  .+++++|.||.|.|
T Consensus       632 G~~G------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          632 GTFG------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             TTSS------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             hccC------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            3211                  125799999999998 44444432  38999999999985

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.43  E-value=3.5e-13  Score=138.26  Aligned_cols=161  Identities=18%  Similarity=0.203  Sum_probs=119.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHH-hCCC-eEEEEeCCCCCcc--ccccccc--CCCceEEeeCcccccc--------c-
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLI-ARGD-SVIVVDNFFTGRK--ENVMHHF--GNPNFELIRHDVVEPL--------L-  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll-~~G~-~V~~l~r~~~~~~--~~~~~~~--~~~~~~~~~~D~~~~~--------~-  178 (340)
                      ..+++++||||+|+||..+++.|+ ++|. +|++++|+.....  +.....+  ...++.++.+|+.++.        + 
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            356799999999999999999999 7898 5889998743221  1111111  2356888999997742        1 


Q ss_pred             --CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc-cccCCCCCCCCCCCCCCCC
Q 019470          179 --LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE-VYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       179 --~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~-v~g~~~~~~~~E~~~~~~~  251 (340)
                        ..+|+||||||...+...    .++++..+++|+.|+.++.+++... .+||++||.. ..|..++            
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~-l~iV~~SS~ag~~g~~g~------------  674 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD-VALVLFSSVSGVLGSGGQ------------  674 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT-SEEEEEEETHHHHTCSSC------------
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEccHHhcCCCCCC------------
Confidence              158999999998654432    2357889999999999999988322 3899999954 4444332            


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                           ..|+.+|...+.+.+++. ..|++++.|.||.+-..+
T Consensus       675 -----~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g  710 (795)
T 3slk_A          675 -----GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHG  710 (795)
T ss_dssp             -----HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCC
T ss_pred             -----HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcch
Confidence                 689999998888877764 459999999999987654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.15  E-value=1.1e-10  Score=131.99  Aligned_cols=159  Identities=15%  Similarity=0.102  Sum_probs=111.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCCCccc--cccccc--CCCceEEeeCcccccc-----------c
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKE--NVMHHF--GNPNFELIRHDVVEPL-----------L  178 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~~~~--~~~~~~--~~~~~~~~~~D~~~~~-----------~  178 (340)
                      .+++++||||+|+||.++++.|+++|++ |++++|+......  .....+  ...++.++.+|+.+..           +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            6789999999999999999999999996 7778887543321  111111  2346778889987642           2


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcc-cccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSE-VYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~-v~g~~~~~~~~E~~~~~~  250 (340)
                      ..+|+||||||......    ..++++..+++|+.|+.++.+++...-   .+||++||.. ..|..+            
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g------------ 2030 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG------------ 2030 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT------------
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC------------
Confidence            36999999999754322    334688899999999999988886542   3899999954 333322            


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYG  291 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G  291 (340)
                           ...|+.+|...+.+++.... .|++...+..|.+-+
T Consensus      2031 -----~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2031 -----QANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCT
T ss_pred             -----cHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCC
Confidence                 26899999999999987654 488888888876543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.13  E-value=9.6e-10  Score=124.68  Aligned_cols=164  Identities=15%  Similarity=0.100  Sum_probs=111.6

Q ss_pred             CCCCCeEEEEcCchH-HHHHHHHHHHhCCCeEEEEeCCCCCc----ccccccccC--CCceEEeeCccccc---------
Q 019470          113 KRKGLRIVVTGGAGF-VGSHLVDRLIARGDSVIVVDNFFTGR----KENVMHHFG--NPNFELIRHDVVEP---------  176 (340)
Q Consensus       113 ~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~l~r~~~~~----~~~~~~~~~--~~~~~~~~~D~~~~---------  176 (340)
                      .+++|++|||||+++ ||.++++.|+++|++|++++|+....    .+.+...+.  ...+..+.+|+.++         
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            478899999999999 99999999999999999999875541    111111121  23567788888663         


Q ss_pred             -------ccCCCCEEEEcccC----CCC-----CCCcCChh----hHHHHHHHHHHHHHHHHHH----cCC----eEEEE
Q 019470          177 -------LLLEVDQIYHLACP----ASP-----VHYKFNPV----KTIKTNVVGTLNMLGLAKR----VGA----RFLLT  228 (340)
Q Consensus       177 -------~~~~~D~Vih~Ag~----~~~-----~~~~~~~~----~~~~~Nv~g~~~ll~~a~~----~~~----~~i~~  228 (340)
                             .+.++|++|||||.    ...     ....++++    ..+++|+.++..+++++..    .+.    .++..
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                   22358999999996    110     01122343    3488999998888877643    221    23322


Q ss_pred             eCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh--h--CCcEEEEEeCceeCCC
Q 019470          229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG--A--GVEVRIARIFNTYGPR  293 (340)
Q Consensus       229 SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~--~--gi~~~ivRp~~i~G~~  293 (340)
                      .|. ..+.                ......|+.||++.+.+++.++.+  .  +++++.+.||.|-+..
T Consensus      2293 ~ss-~~g~----------------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~ 2344 (3089)
T 3zen_D         2293 GSP-NRGM----------------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTG 2344 (3089)
T ss_dssp             ECS-STTS----------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECST
T ss_pred             CCc-cccc----------------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCc
Confidence            221 1110                011146999999999999999988  3  6899999999997543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.11  E-value=1.5e-10  Score=106.86  Aligned_cols=167  Identities=10%  Similarity=0.021  Sum_probs=108.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCC----CCCcc---cccccccCCCceEEeeCcccccccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNF----FTGRK---ENVMHHFGNPNFELIRHDVVEPLLLE  180 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~----~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~  180 (340)
                      +.+||+||||+||||.+++..|+.+|.       +|.++|+.    .....   ..+.+.......++...+-..+++.+
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD   83 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence            346999999999999999999999885       79998885    21111   01111100112233333334567889


Q ss_pred             CCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C--eEEEEeC-ccc--ccCCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A--RFLLTST-SEV--YGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~--~~i~~SS-~~v--~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      +|+|||+||...  ....+..+++..|+.++.++++.+++.+ .  +||++|. ..+  +-.....          ..+.
T Consensus        84 aD~Vi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~----------~~~p  151 (329)
T 1b8p_A           84 ADVALLVGARPR--GPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSA----------PSLP  151 (329)
T ss_dssp             CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTC----------TTSC
T ss_pred             CCEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHc----------CCCC
Confidence            999999999643  2334556788999999999999999874 3  7888886 211  0000000          0011


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR  293 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~  293 (340)
                      +...|+.++....++...+++..|+....++..+|+|..
T Consensus       152 ~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          152 AKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             GGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            123466677777777777777778877777766778854

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.90  E-value=3.6e-09  Score=97.46  Aligned_cols=114  Identities=13%  Similarity=0.053  Sum_probs=77.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCccc-ccccccCCCceEEeeC-cccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKE-NVMHHFGNPNFELIRH-DVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~-~~~~~~~~~~~~~~~~-D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ++|||+|+||+|++|..++..|+++|  ++|+++|+.+..... .+.+......+..+.. +...+++.++|+|||+||.
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~   86 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV   86 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence            34699999999999999999999998  799999976531000 0111111112222212 1234568899999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeC
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS  230 (340)
                      ..  ........+...|+.++.++++.+++.+. .+|+++|
T Consensus        87 ~~--~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           87 PR--KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CC--CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            33  22234456789999999999999999876 5666665

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.86  E-value=9.5e-10  Score=85.20  Aligned_cols=92  Identities=21%  Similarity=0.149  Sum_probs=67.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~A  188 (340)
                      .+++|+|+|+ |++|..+++.|+++| ++|++++|+...... .    ....+..+..|+.+     ..+.++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-~----~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-L----NRMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-H----HTTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-H----HhCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4568999999 999999999999999 899999986432221 1    12355666777654     3456899999998


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                      +..                  ....++++|.+.|++++.+++
T Consensus        78 ~~~------------------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           78 PFF------------------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             CGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred             Cch------------------hhHHHHHHHHHhCCCEEEecC
Confidence            521                  135789999999987665554

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.84  E-value=1.8e-08  Score=92.27  Aligned_cols=166  Identities=10%  Similarity=0.052  Sum_probs=98.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeC--CCCCccc---cccc--ccCCCceEEeeCc-ccccccCCCCEEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDN--FFTGRKE---NVMH--HFGNPNFELIRHD-VVEPLLLEVDQIYH  186 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r--~~~~~~~---~~~~--~~~~~~~~~~~~D-~~~~~~~~~D~Vih  186 (340)
                      |||+||||+|++|.+++..|+.+|.  ++..+|+  .......   .+.+  .+....+++...+ ...+++.++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            4899999999999999999999885  6777887  3211110   1111  1111244555533 34667899999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH-HHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE-GKRT  265 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~-sK~~  265 (340)
                      +||...  ....+...++..|+.++.++++++++.+..+|+++|--+.-.      .+-.+.. ..+.+...+|. +...
T Consensus        81 ~Ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~~~------t~~~~k~-~~~p~~rviG~gt~LD  151 (313)
T 1hye_A           81 TSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVM------TYKALVD-SKFERNQVFGLGTHLD  151 (313)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHHHH------HHHHHHH-HCCCTTSEEECTTHHH
T ss_pred             CCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHHHH------HHHHHHh-hCcChhcEEEeCccHH
Confidence            999643  223345678899999999999999987643666655211100      0000000 01112234554 4444


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCC
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGP  292 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~  292 (340)
                      ..++...+++..|++..-++. +++|.
T Consensus       152 ~~r~~~~la~~lgv~~~~v~~-~v~G~  177 (313)
T 1hye_A          152 SLRFKVAIAKFFGVHIDEVRT-RIIGE  177 (313)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred             HHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence            555555555655665444543 55554

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.80  E-value=1.7e-08  Score=92.00  Aligned_cols=110  Identities=15%  Similarity=0.052  Sum_probs=76.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeC--CCCCccc---cccccc-CCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDN--FFTGRKE---NVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r--~~~~~~~---~~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||+||||+|++|..++..|+.+|.  ++..+|+  .......   .+.+.. ....+.+...|  .+++.++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~--~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC--HHHhCCCCEEEEcC
Confidence            5899999999999999999999886  6888887  4321110   111110 11234444433  56788999999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS  230 (340)
                      |...  .....-..++..|+.++.++++++++.+. .+|+++|
T Consensus        79 g~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S  119 (303)
T 1o6z_A           79 GIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (303)
T ss_dssp             CCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence            8532  22334557789999999999999999975 5666665

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.48  E-value=7.3e-07  Score=81.50  Aligned_cols=112  Identities=13%  Similarity=0.046  Sum_probs=76.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcc-cccccccCCCceEEeeC-cccccccCCCCEEEEcccCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRK-ENVMHHFGNPNFELIRH-DVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~-D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      |||.|+||+|++|..++..|+.+|  .+|.++|+.+.... ..+.+......+..... +..++++.++|+||+++|...
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~   80 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence            489999999999999999999888  69999999751100 01111111112333222 233446889999999998643


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      .  ...+-.+++..|+..+..+++.+++...  ++|++|-
T Consensus        81 ~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           81 K--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             C--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             C--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            2  2233456788999999999999988764  7777653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.48  E-value=1.2e-06  Score=81.41  Aligned_cols=165  Identities=10%  Similarity=-0.025  Sum_probs=100.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHH-hCCCeEEEEeCCCCCccccc-----------cc--ccCCCceEEeeCccccc---
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLI-ARGDSVIVVDNFFTGRKENV-----------MH--HFGNPNFELIRHDVVEP---  176 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll-~~G~~V~~l~r~~~~~~~~~-----------~~--~~~~~~~~~~~~D~~~~---  176 (340)
                      ..+|++|||||+.+||.+.+..|+ +.|..|+++.+..+......           .+  .........+.+|+.++   
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            467899999999999999999998 67999999988654432211           00  11234677889998764   


Q ss_pred             ---------ccCCCCEEEEcccCCCCCCC------------------------cCC-h-----hhHHHHHHHHHH-----
Q 019470          177 ---------LLLEVDQIYHLACPASPVHY------------------------KFN-P-----VKTIKTNVVGTL-----  212 (340)
Q Consensus       177 ---------~~~~~D~Vih~Ag~~~~~~~------------------------~~~-~-----~~~~~~Nv~g~~-----  212 (340)
                               .+.++|++||++|.....+.                        ..+ +     ...-+-++.+|.     
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence                     34579999999996421100                        000 0     000011222222     


Q ss_pred             ----HHHHHHHHcC-----CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHhh-CCcEE
Q 019470          213 ----NMLGLAKRVG-----ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-GVEVR  282 (340)
Q Consensus       213 ----~ll~~a~~~~-----~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~-gi~~~  282 (340)
                          ..+.+....+     .+++-+|+.+.   ....           |.-....+|.+|+..|..++.++.+. +++++
T Consensus       208 s~~s~w~~al~~a~lla~G~siva~SYiGs---e~t~-----------P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~  273 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEEGCITLAYSYIGP---EATQ-----------ALYRKGTIGKAKEHLEATAHRLNKENPSIRAF  273 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCC---GGGH-----------HHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred             hHHHHHHHHHHhhhcccCCceEEEEeccCc---ceee-----------cCCCccHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence                2334444444     37887776431   0000           00001358999999999999998875 56777


Q ss_pred             EEEeCceeCC
Q 019470          283 IARIFNTYGP  292 (340)
Q Consensus       283 ivRp~~i~G~  292 (340)
                      ++-++.+...
T Consensus       274 v~v~~a~vT~  283 (401)
T 4ggo_A          274 VSVNKGLVTR  283 (401)
T ss_dssp             EEECCCCCCT
T ss_pred             EEEcCccccc
Confidence            7777765543

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.45  E-value=3.1e-07  Score=84.56  Aligned_cols=113  Identities=13%  Similarity=0.065  Sum_probs=76.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC--e-----EEEEeCCCCC-cc----cccccccCCCceEEeeCcccccccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD--S-----VIVVDNFFTG-RK----ENVMHHFGNPNFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~-----V~~l~r~~~~-~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~D~  183 (340)
                      .++|+||||+|+||.+++..|+..|.  +     +.++|+.... ..    ..+.+......-++...+-....+.++|+
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv   82 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV   82 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence            35899999999999999999998875  5     8888885311 11    11111100111122222333456889999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC---eEEEEeC
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTST  230 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~---~~i~~SS  230 (340)
                      ||++||...  ....+-.++++.|+..+..+++++++.+.   +++.+|-
T Consensus        83 VvitAg~pr--kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           83 AILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            999998532  23345667889999999999999999874   4666664

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.45  E-value=5.8e-08  Score=87.72  Aligned_cols=77  Identities=14%  Similarity=0.209  Sum_probs=54.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC-CceEEeeCccc-----ccccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVV-----EPLLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~D~~-----~~~~~~~D~Vih  186 (340)
                      ++++++++||||+|++|+++++.|+++|++|++++|+.+...+ +...+.. .++.++.+|+.     +..+.++|+|||
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~-l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn  194 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA-AADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT  194 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHH-HHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence            4567899999999999999999999999999999996433221 1111100 12344445553     344667999999


Q ss_pred             cccC
Q 019470          187 LACP  190 (340)
Q Consensus       187 ~Ag~  190 (340)
                      |+|.
T Consensus       195 ~ag~  198 (287)
T 1lu9_A          195 AGAI  198 (287)
T ss_dssp             CCCT
T ss_pred             CCCc
Confidence            9975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.40  E-value=8.6e-07  Score=76.91  Aligned_cols=71  Identities=17%  Similarity=0.308  Sum_probs=53.2

Q ss_pred             CCCeEEEEcC----------------chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc--
Q 019470          115 KGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--  176 (340)
Q Consensus       115 ~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--  176 (340)
                      ++|+||||||                +|.+|.+|+++|+++|++|+++.+......      .....+++++.+..++  
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~------~~~~~~~~~~v~s~~em~   75 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP------EPHPNLSIREITNTKDLL   75 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC------CCCTTEEEEECCSHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cCCCCeEEEEHhHHHHHH
Confidence            4789999999                999999999999999999999998542111      0123567776665442  


Q ss_pred             -----ccCCCCEEEEcccCC
Q 019470          177 -----LLLEVDQIYHLACPA  191 (340)
Q Consensus       177 -----~~~~~D~Vih~Ag~~  191 (340)
                           .+.++|++||+||..
T Consensus        76 ~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           76 IEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHhcCCCCEEEEcCccc
Confidence                 345799999999964

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.35  E-value=2.1e-06  Score=68.32  Aligned_cols=96  Identities=17%  Similarity=0.163  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~  187 (340)
                      .++++|+|+|+ |.+|..+++.|.+.|++|++++++..... .    +.......+.+|..+.      .+.++|+||++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~----~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~   77 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-A----YASYATHAVIANATEENELLSLGIRNFEYVIVA   77 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-T----TTTTCSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-H----HHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence            34668999997 99999999999999999999998543211 1    1112334555665432      14679999998


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCc
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS  231 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~  231 (340)
                      ++.        +    .+.|.    .+.+.+++.+. +++..++.
T Consensus        78 ~~~--------~----~~~~~----~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           78 IGA--------N----IQAST----LTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             CCS--------C----HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred             CCC--------c----hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence            852        0    02332    35667777776 56655543

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.30  E-value=2e-06  Score=74.38  Aligned_cols=71  Identities=20%  Similarity=0.195  Sum_probs=51.3

Q ss_pred             CCCCCeEEEEcC----------------chHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc
Q 019470          113 KRKGLRIVVTGG----------------AGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP  176 (340)
Q Consensus       113 ~~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~  176 (340)
                      ++++|+||||||                +|.+|.++++.|+++|++|+++++.....   .     ...++.++....++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~---~-----~~g~~~~dv~~~~~   76 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---T-----PPFVKRVDVMTALE   76 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---C-----CTTEEEEECCSHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc---c-----CCCCeEEccCcHHH
Confidence            367889999999                69999999999999999999998753211   0     12344444333221


Q ss_pred             -------ccCCCCEEEEcccCC
Q 019470          177 -------LLLEVDQIYHLACPA  191 (340)
Q Consensus       177 -------~~~~~D~Vih~Ag~~  191 (340)
                             .+.++|++|||||..
T Consensus        77 ~~~~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           77 MEAAVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHHHhcCCCCEEEECCccc
Confidence                   245799999999975

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.20  E-value=1.1e-06  Score=84.38  Aligned_cols=104  Identities=18%  Similarity=0.166  Sum_probs=67.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~Ag  189 (340)
                      ++++|+|+| +|++|+++++.|++.|++|++++|+..... .+...+  ..+..+..|+.+     ..+.++|+|||+++
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~-~la~~~--~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~   77 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAK-KLSAGV--QHSTPISLDVNDDAALDAEVAKHDLVISLIP   77 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHH-HTTTTC--TTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHH-HHHHhc--CCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence            467899998 899999999999999999999998643221 111111  235666677654     34568999999997


Q ss_pred             CCCCCCCcCChhhHHHH--H-------HHHHHHHHHHHHHcCCeE
Q 019470          190 PASPVHYKFNPVKTIKT--N-------VVGTLNMLGLAKRVGARF  225 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~--N-------v~g~~~ll~~a~~~~~~~  225 (340)
                      .....  . -....++.  |       ...+.+++++|+++|+++
T Consensus        78 ~~~~~--~-i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~  119 (450)
T 1ff9_A           78 YTFHA--T-VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV  119 (450)
T ss_dssp             --CHH--H-HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEE
T ss_pred             cccch--H-HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeE
Confidence            53210  0 01111111  1       235788999999998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.11  E-value=7.6e-06  Score=73.14  Aligned_cols=76  Identities=12%  Similarity=0.189  Sum_probs=43.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEE-eCCCCCc-ccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGR-KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l-~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +++++|+|+|++|.+|+.+++.+.+. |+++.++ ++..... ..............+...+..+..+.++|+||+++.
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCC
Confidence            34569999999999999999998864 7787754 4432211 111111111011111112223445568999998774

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.08  E-value=1.5e-05  Score=63.56  Aligned_cols=69  Identities=22%  Similarity=0.264  Sum_probs=51.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      .+++|+|+|+ |.+|..+++.|.++|++|++++++++.... .    ....+.++.+|..++.      +.++|+||.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-~----~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-L----EDEGFDAVIADPTDESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-H----HHTTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-H----HHCCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence            4568999997 999999999999999999999986432211 1    1124677788877652      35799999876


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      +
T Consensus        79 ~   79 (141)
T 3llv_A           79 S   79 (141)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.07  E-value=1.6e-05  Score=62.81  Aligned_cols=92  Identities=21%  Similarity=0.226  Sum_probs=59.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~Ag  189 (340)
                      +|+|+|+|+ |++|..+++.|.+.|++|+++++++.... .+...   ..+.++.+|..+.      .+.++|+||++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~-~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-KASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHHh---cCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence            468999986 99999999999999999999998543221 11111   1344555555432      2567999999864


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~S  229 (340)
                      .         .    ..|.    .+.+.++..+. ++|..+
T Consensus        79 ~---------~----~~~~----~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           79 K---------E----EVNL----MSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             C---------H----HHHH----HHHHHHHHTTCCCEEEEC
T ss_pred             C---------c----hHHH----HHHHHHHHcCCCEEEEEe
Confidence            1         1    1232    45566777775 666443

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.06  E-value=6.9e-06  Score=75.74  Aligned_cols=112  Identities=14%  Similarity=0.195  Sum_probs=73.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCccc---ccccc-cCCCceEEeeCcccccccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKE---NVMHH-FGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~---~~~~~-~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      ++++||.|+|++|++|..++..|+.+|  .+|.++|+.......   .+.+. +...++.+  .+-..+++.++|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~--t~d~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF--TSDIKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE--ESCHHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE--cCCHHHHhCCCCEEEEc
Confidence            346799999999999999999999998  489999985432111   11111 11112222  12223457899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--e-EEEEe
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--R-FLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~-~i~~S  229 (340)
                      ||...  ....+-.+++..|+.....+.+.+.+...  . ++.+|
T Consensus        84 aG~p~--kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           84 GGAPR--KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             cCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            98532  22334567789999999999999988764  3 55555

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.00  E-value=5.2e-06  Score=78.59  Aligned_cols=94  Identities=16%  Similarity=0.275  Sum_probs=65.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccC---CCceEEeeCccccc-----ccCC--CC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFG---NPNFELIRHDVVEP-----LLLE--VD  182 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~-----~~~~--~D  182 (340)
                      |++|+|+|| |+||+.+++.|+++|.   +|.+.+|+.....+.. ..+.   ..++..+..|+.+.     .+.+  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la-~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA-QSIKAKGYGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH-HHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH-HHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            468999998 9999999999999983   8999998654332211 1111   12467777777653     3344  89


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                      +|||++++..                  ...++++|.+.|++++-++
T Consensus        79 vVin~ag~~~------------------~~~v~~a~l~~g~~vvD~a  107 (405)
T 4ina_A           79 IVLNIALPYQ------------------DLTIMEACLRTGVPYLDTA  107 (405)
T ss_dssp             EEEECSCGGG------------------HHHHHHHHHHHTCCEEESS
T ss_pred             EEEECCCccc------------------ChHHHHHHHHhCCCEEEec
Confidence            9999997410                  1467888999998766543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.96  E-value=3.3e-05  Score=70.71  Aligned_cols=112  Identities=17%  Similarity=0.177  Sum_probs=76.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccc--cCCCceEEeeCcccccccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHH--FGNPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      .++++|.|+|+ |++|..++..|+..|.  +|.++|++......   .+.+.  +....+.+...|  .+++.++|+||.
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~--~~a~~~aDvVvi   79 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT--YEDCKDADIVCI   79 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC--GGGGTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc--HHHhCCCCEEEE
Confidence            34579999995 9999999999999987  89999985432211   11111  111233444333  356889999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ++|...  ....+-.+++..|+.....+.+.+.+...  .++.+|-
T Consensus        80 ~ag~p~--kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           80 CAGANQ--KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             ecccCC--CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            998532  22334566788999999999999988764  5666653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.89  E-value=5.8e-06  Score=77.09  Aligned_cols=90  Identities=12%  Similarity=0.110  Sum_probs=61.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~A  188 (340)
                      -+.|||+|.|| |++|+.+++.|.+ .++|.+.+++..... ..     ...+..+..|..+     ..+.++|+||+++
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~-~~-----~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~   85 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLE-KV-----KEFATPLKVDASNFDKLVEVMKEFELVIGAL   85 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHH-HH-----TTTSEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHH-HH-----hccCCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence            34568999998 9999999988754 579999988543221 11     1233445556544     3567899999988


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                      ++.              .    ...++++|.++|++++=+|
T Consensus        86 p~~--------------~----~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           86 PGF--------------L----GFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CGG--------------G----HHHHHHHHHHHTCEEEECC
T ss_pred             CCc--------------c----cchHHHHHHhcCcceEeee
Confidence            631              1    1368899999999877665

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.87  E-value=3.6e-05  Score=62.51  Aligned_cols=71  Identities=23%  Similarity=0.240  Sum_probs=49.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cc-cCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PL-LLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~-~~~~D~Vih~  187 (340)
                      ..+++|+|+|+ |.+|..+++.|.+.|++|+++++++..... +..   .....++.+|..+     .. +.++|+||.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~-~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~   91 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR-LNS---EFSGFTVVGDAAEFETLKECGMEKADMVFAF   91 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG-SCT---TCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHh---cCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence            45679999995 999999999999999999999986543221 110   2234555555433     12 5679999987


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      .+
T Consensus        92 ~~   93 (155)
T 2g1u_A           92 TN   93 (155)
T ss_dssp             SS
T ss_pred             eC
Confidence            64

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.84  E-value=3.2e-05  Score=71.51  Aligned_cols=99  Identities=8%  Similarity=0.098  Sum_probs=62.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCC-----C-eEEEEeCCCCC-c-ccccccccCC-CceEEeeCcccccccCCCCEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARG-----D-SVIVVDNFFTG-R-KENVMHHFGN-PNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-----~-~V~~l~r~~~~-~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +++++|.|.||||++|+.|++.|++++     + +|+.+.+.... . .......+.. ..+++.+.|  ...+.++|+|
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~DvV   84 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAV   84 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCEE
Confidence            345799999999999999999999988     5 77777543211 1 1111111111 122333333  2335589999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccc
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV  233 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v  233 (340)
                      |.+.+...                  +..+++.+ +.|+++|-+|+..-
T Consensus        85 f~alg~~~------------------s~~~~~~~-~~G~~vIDlSa~~R  114 (352)
T 2nqt_A           85 FLALPHGH------------------SAVLAQQL-SPETLIIDCGADFR  114 (352)
T ss_dssp             EECCTTSC------------------CHHHHHHS-CTTSEEEECSSTTT
T ss_pred             EECCCCcc------------------hHHHHHHH-hCCCEEEEECCCcc
Confidence            99886321                  33566777 77889999998653

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.84  E-value=7.8e-05  Score=67.82  Aligned_cols=109  Identities=15%  Similarity=0.123  Sum_probs=75.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-C--CeEEEEeCCCCCccc---ccccccCCCceEEee--CcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-G--DSVIVVDNFFTGRKE---NVMHHFGNPNFELIR--HDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G--~~V~~l~r~~~~~~~---~~~~~~~~~~~~~~~--~D~~~~~~~~~D~Vih~A  188 (340)
                      |||.|+||+|.+|..++..|..+ +  .++.++|+.+ ...-   .+.+ . .....+..  .+-....+.++|+||.+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~-~-~~~~~v~~~~~~~~~~~~~~aDivii~a   77 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH-I-PTAVKIKGFSGEDATPALEGADVVLISA   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHT-S-CSSEEEEEECSSCCHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhC-C-CCCceEEEecCCCcHHHhCCCCEEEEeC
Confidence            58999999999999999988875 5  4899999865 2111   1111 1 11223322  223345788999999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      |...  ....+-.++++.|..-...+.+.+.+...  .++.+|-
T Consensus        78 g~~r--kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           78 GVAR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             SCSC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            8532  23345677889999999999999988764  6666653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.79  E-value=4.1e-05  Score=70.01  Aligned_cols=112  Identities=14%  Similarity=0.182  Sum_probs=66.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccccC-CCceEEeeCcccccccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHFG-NPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      +..+++|.|+|+ |.+|..++..|+..|.  +|.++|++.....-   .+.+... ...+.+...|  .+++.++|+||.
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--~~a~~~aDiVvi   82 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--YSDAKDADLVVI   82 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTCSEEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--HHHhcCCCEEEE
Confidence            456779999996 9999999999999887  89999985432221   1111100 0233444333  356889999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +||...  ....+-.+++..|+.-...+.+.+.+...  .++.+|
T Consensus        83 ~ag~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           83 TAGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CCCCC------------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             CCCCCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            998532  22233456778899889999999988764  566555

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.79  E-value=0.00022  Score=65.18  Aligned_cols=111  Identities=14%  Similarity=0.091  Sum_probs=76.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc---ccccc--cCCCceEEe-eCcccccccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE---NVMHH--FGNPNFELI-RHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~-~~D~~~~~~~~~D~Vih  186 (340)
                      +++++|.|+| +|.+|..++..|+..|. +|.++|+.+.....   .+.+.  .......+. ..|  .+++.++|+||.
T Consensus         3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d--~~a~~~aDvVIi   79 (321)
T 3p7m_A            3 MARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND--YKDLENSDVVIV   79 (321)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC--GGGGTTCSEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC--HHHHCCCCEEEE
Confidence            3457999999 59999999999999988 99999987643321   11111  001123333 233  357889999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ++|...  ....+-.+++..|..-...+++.+.+...  .++.+|
T Consensus        80 ~ag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           80 TAGVPR--KPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCCcCC--CCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            998532  22334566788899999999999888764  666665

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.78  E-value=9.5e-05  Score=67.61  Aligned_cols=112  Identities=11%  Similarity=0.065  Sum_probs=74.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc---ccccc--cCCCceEEe-eCcccccccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE---NVMHH--FGNPNFELI-RHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~-~~D~~~~~~~~~D~Vih  186 (340)
                      +++++|.|+|+ |.+|..++..|+..|. +|.++|+.+.....   .+.+.  +......+. ..|.  +++.++|+||.
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~--~a~~~aDiVIi   81 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY--AAIEGADVVIV   81 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG--GGGTTCSEEEE
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH--HHHCCCCEEEE
Confidence            45679999997 9999999999999998 99999997654321   11111  001122333 2343  67889999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ++|...  ....+-.+++..|..-...+.+.+.+...  .++.+|-
T Consensus        82 aag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           82 TAGVPR--KPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             CCSCCC--C-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ccCcCC--CCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            998532  22233446778899999999999888764  6666663

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.76  E-value=0.00023  Score=65.01  Aligned_cols=109  Identities=17%  Similarity=0.158  Sum_probs=70.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---cccccc-CCCceEEeeCcccccccCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +++||.|+|+ |++|..++..|+..|.  +|.++|++......   .+.+.. ....+.+...|  .+++.++|+||.++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~--~~a~~~aDvVii~~   82 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD--YSDVKDCDVIVVTA   82 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C--GGGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC--HHHhCCCCEEEEcC
Confidence            4568999997 9999999999999987  89999987543321   111110 01234444322  45688999999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLT  228 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~  228 (340)
                      +...  .....-.++...|+.....+++.+.+...  .++.+
T Consensus        83 g~p~--k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           83 GANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             CC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             CCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            8532  12223456778899999999999887653  45554

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.76  E-value=9.9e-05  Score=59.64  Aligned_cols=72  Identities=18%  Similarity=0.236  Sum_probs=51.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~Ag  189 (340)
                      .++++|+|+ |.+|+.+++.|.+.|++|++++++++...+.+.... ..++.++.+|..++      .+.++|.||.+.+
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            457999995 999999999999999999999985322111221111 23467888887654      2568999998763

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.74  E-value=0.00014  Score=65.58  Aligned_cols=109  Identities=16%  Similarity=0.088  Sum_probs=76.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---cccccc--CCCceEEee-CcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHF--GNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~--~~~~~~~~~-~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|+|+ |.+|..++..|+..|.  +|.++|+++.....   .+.+..  .....++.- .|  .+++.++|+||.++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--~~a~~~aDiVViaa   77 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--YSLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC--GGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC--HHHhCCCCEEEECC
Confidence            58999998 9999999999999988  89999987543210   111111  112233332 34  66789999999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      |...  ....+-.+++..|..-...+.+.+.+.+.  .++.+|-
T Consensus        78 g~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           78 GLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            8532  22334567788999999999999988864  6666663

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.70  E-value=0.0002  Score=65.96  Aligned_cols=115  Identities=11%  Similarity=-0.004  Sum_probs=76.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCCcc-c----ccccccCCCceEEeeCcccccccCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGRK-E----NVMHHFGNPNFELIRHDVVEPLLLEV  181 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~~~-~----~~~~~~~~~~~~~~~~D~~~~~~~~~  181 (340)
                      ++..||.|+||+|.||..|+-.|.+...       ++..+|..+.... +    .+.+............+-...++.++
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~a  101 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGV  101 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCC
Confidence            3445999999999999999988776532       6778887432111 1    12211111222333344445678999


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeC
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTST  230 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS  230 (340)
                      |+||-+||...  ....+-.++++.|..-...+.+.+.+..   ++++.+|-
T Consensus       102 dvVvi~aG~pr--kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A          102 AIAIMCGAFPR--KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             SEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CEEEECCCCCC--CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            99999999643  3344567889999999999999987753   35666663

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.70  E-value=0.00014  Score=66.30  Aligned_cols=113  Identities=14%  Similarity=0.078  Sum_probs=75.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC-CCccc----cccccc--CCCceEEeeCcccccccCCCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF-TGRKE----NVMHHF--GNPNFELIRHDVVEPLLLEVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~-~~~~~----~~~~~~--~~~~~~~~~~D~~~~~~~~~D~Vi  185 (340)
                      ++.++|.|+|+ |.+|..++..|+..|+ +|+++|+++ +...+    .+.+..  ......+.-.+. ...+.++|+||
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVI   83 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVV   83 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEE
Confidence            45579999996 9999999999999999 999999963 11111    111110  001112221111 35688999999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      .++|...  ....+-.+++..|+.-...+.+.+.+...  .++.+|-
T Consensus        84 iaag~p~--kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           84 ITAGIAR--KPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             ECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            9998532  22334567888999999999999988764  6666663

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.69  E-value=3.2e-05  Score=74.34  Aligned_cols=73  Identities=22%  Similarity=0.328  Sum_probs=50.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYH  186 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih  186 (340)
                      ..++++|+|+|+ |++|+.+++.|++. |++|++++|+.+...+ +...   ..+..+..|+.+     ..+.++|+|||
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~-la~~---~~~~~~~~D~~d~~~l~~~l~~~DvVIn   94 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQA-LAKP---SGSKAISLDVTDDSALDKVLADNDVVIS   94 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHH-HHGG---GTCEEEECCTTCHHHHHHHHHTSSEEEE
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHH-HHHh---cCCcEEEEecCCHHHHHHHHcCCCEEEE
Confidence            456779999997 99999999999998 7899999996433222 1111   134455555533     34568999999


Q ss_pred             cccC
Q 019470          187 LACP  190 (340)
Q Consensus       187 ~Ag~  190 (340)
                      +++.
T Consensus        95 ~tp~   98 (467)
T 2axq_A           95 LIPY   98 (467)
T ss_dssp             CSCG
T ss_pred             CCch
Confidence            9875

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.66  E-value=5.8e-05  Score=67.33  Aligned_cols=75  Identities=20%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC-CceEEeeCcccccccCCCCEEEEcccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ..++++++|+|+ |.+|+.++..|++.|.+|++++|+.+... .+...+.. ..++....+....  .++|+||++++..
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~-~la~~~~~~~~~~~~~~~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAE-ELAKLFAHTGSIQALSMDELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHH-HHHHHTGGGSSEEECCSGGGTT--CCCSEEEECCSCG
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHHhhccCCeeEecHHHhcc--CCCCEEEECCCCC
Confidence            456789999998 78999999999999999999998643322 12111111 1233322211111  4799999999853

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.65  E-value=0.00024  Score=65.16  Aligned_cols=116  Identities=13%  Similarity=0.045  Sum_probs=73.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc---ccccc--CCCceEEee-CcccccccCCCCEE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN---VMHHF--GNPNFELIR-HDVVEPLLLEVDQI  184 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~---~~~~~--~~~~~~~~~-~D~~~~~~~~~D~V  184 (340)
                      +..+.++|.|+|| |.+|..++..|+..|+ +|.++|++++.....   +.+..  ......+.- .|. ++++.++|+|
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~ea~~~aDiV   82 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSY-EAALTGADCV   82 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSH-HHHHTTCSEE
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCH-HHHhCCCCEE
Confidence            3444579999997 9999999999999998 999999875433221   11100  011112222 333 3367899999


Q ss_pred             EEcccCCCCCCCcC---ChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          185 YHLACPASPVHYKF---NPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       185 ih~Ag~~~~~~~~~---~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      |-++|.......+.   .-......|+.-...+.+.+.+...  .++.+|
T Consensus        83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            99997532211100   3445677888888888888877753  444433

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.63  E-value=0.00022  Score=65.37  Aligned_cols=113  Identities=13%  Similarity=0.075  Sum_probs=76.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccccC-CCceEEeeCcccccccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHFG-NPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      ...++|.|+|+ |.+|..++..|+.+|.  +|.++|+.......   .+.+... .....++..+.. +.+.++|+||.+
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~   94 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIIT   94 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEc
Confidence            45679999997 9999999999999987  89999986432211   1111100 011223322222 358899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ||...  ....+-.+++..|..-...+.+.+.+...  .++.+|-
T Consensus        95 aG~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           95 AGARQ--QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             CSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCCC--CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            98632  23345567889999999999999988763  6666663

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.63  E-value=0.00033  Score=63.66  Aligned_cols=102  Identities=17%  Similarity=0.165  Sum_probs=66.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccC-----CCceEEee-CcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-----NPNFELIR-HDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-----~~~~~~~~-~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++|.|+|+ |.+|..++..|+..|+ +|.++|++++...........     .....+.. .|.  +++.++|+||.++|
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~a~g   79 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--ADTANSDVIVVTSG   79 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--GGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--HHHCCCCEEEEcCC
Confidence            58999998 9999999999999997 888898865432211111001     11223333 443  56889999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA  223 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~  223 (340)
                      ....  ....-..+...|+.....+.+.+.+...
T Consensus        80 ~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p  111 (309)
T 1ur5_A           80 APRK--PGMSREDLIKVNADITRACISQAAPLSP  111 (309)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHGGGCT
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            5321  1222345567888888899998888764

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.62  E-value=1.5e-05  Score=67.40  Aligned_cols=36  Identities=19%  Similarity=0.201  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++++|+|+||+|.||..+++.+...|++|+++++++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~   73 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD   73 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence            456999999999999999999999999999999864

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.60  E-value=0.00011  Score=67.66  Aligned_cols=92  Identities=20%  Similarity=0.191  Sum_probs=58.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC---eEEEEe-CCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD---SVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~-r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      ++|+|.||+|++|+.+++.|+++++   +++++. +........    +....+.+.+.|  ...+.++|+||.+.+.  
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~----~~g~~i~~~~~~--~~~~~~~DvV~~a~g~--   78 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG----FAESSLRVGDVD--SFDFSSVGLAFFAAAA--   78 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE----ETTEEEECEEGG--GCCGGGCSEEEECSCH--
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc----cCCcceEEecCC--HHHhcCCCEEEEcCCc--
Confidence            5899999999999999999997765   555554 221111111    111123333323  2235689999998762  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                      .....++..+.+.|+++|.+|+..
T Consensus        79 ----------------~~s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           79 ----------------EVSRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ----------------HHHHHHHHHHHHCCCEEEEeCCCC
Confidence                            124466777888898888888754

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.56  E-value=0.00022  Score=64.26  Aligned_cols=110  Identities=15%  Similarity=0.058  Sum_probs=74.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcc---ccccccc--CCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRK---ENVMHHF--GNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |||.|+|+ |+||..++..|+.++.  ++..+|..+....   ..+.+..  -.....+...+. .+++.++|+||-.||
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d-~~~~~~aDvVvitAG   78 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAG   78 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCC-HHHhCCCCEEEEecC
Confidence            58999995 9999999999988875  8999988642221   1111110  011222322221 246889999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ...  ....+-.+++..|..-...+.+.+.+...  .++.+|-
T Consensus        79 ~pr--kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           79 LAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             CCC--CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            643  33456778899999999999999998874  5666654

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.54  E-value=0.00035  Score=63.93  Aligned_cols=111  Identities=14%  Similarity=0.163  Sum_probs=73.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---cccccc-CCCceEEeeCcccccccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .+.+||.|+|| |.+|..++..|+..+.  +|..+|+.......   .+.+.. ....+.+.. | ..+++.++|+||..
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~-~~~a~~~aDvVii~   83 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A-EYSDAKDADLVVIT   83 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C-CGGGGGGCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEEc
Confidence            44579999998 9999999999988876  89999985432211   111110 002334443 3 35568899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +|...  .....-..+...|+.-...+.+.+++...  .++.+|
T Consensus        84 ag~~~--k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           84 AGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            98532  22234456778899999999998888764  666654

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.45  E-value=0.00041  Score=63.96  Aligned_cols=94  Identities=12%  Similarity=0.103  Sum_probs=60.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccccc---ccCC-CceEEeeCcccccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMH---HFGN-PNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~---~~~~-~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +++|.|.||+|++|+.+++.|.++.. +++++.+..... .....   .+.. ..+.+...|   . +.++|+||.+++.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~   78 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPH   78 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCc
Confidence            46899999999999999999998765 777776532211 11111   1111 122222222   2 4689999998763


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      .                  ....++..+.+.|+++|-.|+..
T Consensus        79 ~------------------~s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           79 G------------------VFAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             T------------------HHHHTHHHHHTTCSEEEECSSTT
T ss_pred             H------------------HHHHHHHHHHHCCCEEEEcCccc
Confidence            1                  13456667778889999888853

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.45  E-value=0.00051  Score=62.45  Aligned_cols=110  Identities=10%  Similarity=0.029  Sum_probs=73.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccc--cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHH--FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |+|.|+|+ |.+|..++..|+..|.  +|.++|+.+....-   .+.+.  .......+...| ...++.++|+||.+||
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~-~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN-DYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES-SSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC-CHHHhCCCCEEEECCC
Confidence            58999996 9999999999999886  89999997643221   11111  001123333222 2457889999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ...  ....+-.+++..|..-...+.+.+.+...  .++.+|-
T Consensus        79 ~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           79 LPR--SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             C---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             CCC--CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            532  22234567788999999999999988864  6666663

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.45  E-value=0.00013  Score=60.66  Aligned_cols=70  Identities=16%  Similarity=0.185  Sum_probs=49.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cc--cCCCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PL--LLEVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~--~~~~D~Vi  185 (340)
                      ..+++|+|+| .|.+|..+++.|.+. |++|++++++++.... +.    ...++++.+|..+     ..  +.++|.||
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~----~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQ-HR----SEGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HH----HTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HH----HCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            4566899998 699999999999999 9999999986433221 11    1234555555533     22  56799999


Q ss_pred             Eccc
Q 019470          186 HLAC  189 (340)
Q Consensus       186 h~Ag  189 (340)
                      .+.+
T Consensus       111 ~~~~  114 (183)
T 3c85_A          111 LAMP  114 (183)
T ss_dssp             ECCS
T ss_pred             EeCC
Confidence            8663

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.42  E-value=0.00043  Score=63.21  Aligned_cols=111  Identities=14%  Similarity=0.009  Sum_probs=74.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccccC-CCceEEee-CcccccccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHFG-NPNFELIR-HDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~~-~~~~~~~~-~D~~~~~~~~~D~Vih~  187 (340)
                      ..++|.|+|+ |.+|..++..|+..|.  +|.++|++.+....   .+.+... .....+.. .|. + .+.++|+||-+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~-~-~~~daDiVIit   96 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY-S-VSAGSKLVVIT   96 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS-C-SCSSCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH-H-HhCCCCEEEEe
Confidence            4569999998 9999999999999987  89999986432211   1111100 11123332 343 3 48899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ||...  ....+-.+++..|+.-...+.+.+.+.+.  .++.+|-
T Consensus        97 aG~p~--kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           97 AGARQ--QEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             CSCCC--CSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            98643  22334456778899999999998888763  5666663

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.41  E-value=0.00069  Score=61.52  Aligned_cols=108  Identities=15%  Similarity=0.092  Sum_probs=73.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCccc---cccccc-CCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKE---NVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~---~~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |||.|+|+ |.+|..++..|+..+  .+|.++|+..+....   .+.+.. ....+++...|  .+++.++|+||..+|.
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~--~~a~~~aD~Vii~ag~   77 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS--YGDLEGARAVVLAAGV   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTEEEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECC--HHHhCCCCEEEECCCC
Confidence            48999998 999999999999987  489999986432221   111110 01233444432  5678999999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  .....-..+...|..-...+.+.+++...  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           78 AQ--RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             CC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CC--CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            32  22234456778899999999998888763  666654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.41  E-value=0.00051  Score=62.19  Aligned_cols=108  Identities=19%  Similarity=0.201  Sum_probs=66.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccc---ccc-CCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVM---HHF-GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~---~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |+|.|+|+ |.+|..++..|+..|+  +|.++|+++........   +.. ......+...|  .+++.++|+||.+++.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~--~~a~~~aDvVIi~~~~   77 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG--HSELADAQVVILTAGA   77 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC--GGGGTTCSEEEECC--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC--HHHhCCCCEEEEcCCC
Confidence            48999997 9999999999999998  99999987432211111   110 00122333223  3568899999999874


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  .....-.+....|+.....+++.+.+...  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           78 NQ--KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CC--CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            32  11222335567888888888888877653  455544

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.40  E-value=6.2e-05  Score=68.96  Aligned_cols=37  Identities=24%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..+++|+|+||+|.||..+++.+...|++|++++++.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~  180 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD  180 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3578999999999999999999999999999999864

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.40  E-value=0.0004  Score=64.76  Aligned_cols=106  Identities=11%  Similarity=0.059  Sum_probs=59.6

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccc---cCC-------CceEEeeCccccc
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH---FGN-------PNFELIRHDVVEP  176 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~---~~~-------~~~~~~~~D~~~~  176 (340)
                      +|....+++++|.|.||||++|..|++.|.++.+ ++..+.-+.......+.+.   +..       ....+.+.|..+ 
T Consensus        11 ~~~~~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~-   89 (381)
T 3hsk_A           11 VPRGSHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEG-   89 (381)
T ss_dssp             -------CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT-
T ss_pred             ccccccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhh-
Confidence            4444456777999999999999999998887754 6765531111111111110   000       112222222211 


Q ss_pred             ccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       177 ~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      .+.++|+||-+.+.                  ..+..+...+.+.|+++|=.|+..
T Consensus        90 ~~~~~Dvvf~alp~------------------~~s~~~~~~~~~~G~~VIDlSa~f  127 (381)
T 3hsk_A           90 NFLECDVVFSGLDA------------------DVAGDIEKSFVEAGLAVVSNAKNY  127 (381)
T ss_dssp             TGGGCSEEEECCCH------------------HHHHHHHHHHHHTTCEEEECCSTT
T ss_pred             hcccCCEEEECCCh------------------hHHHHHHHHHHhCCCEEEEcCCcc
Confidence            45789999988752                  123455666678888999888865

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.39  E-value=0.0015  Score=59.25  Aligned_cols=108  Identities=14%  Similarity=0.083  Sum_probs=70.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeCCCCCccccc---cccc--CCCceEEee-CcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDNFFTGRKENV---MHHF--GNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r~~~~~~~~~---~~~~--~~~~~~~~~-~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|+|+ |.+|..++..|++.  |++|+++++++.......   .+..  ......+.. .|. + .+.++|+||-++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~-~l~~aDvViiav   77 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY-A-DTANSDIVIITA   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG-G-GGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCH-H-HHCCCCEEEEeC
Confidence            48999997 99999999999985  789999999754322111   1100  001222322 333 3 378999999988


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +..  ......-..++..|+.-...+.+.+.+...  .++.++
T Consensus        78 ~~p--~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           78 GLP--RKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             SCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             CCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            742  222223456777888888888888877653  556554

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.39  E-value=0.00073  Score=62.64  Aligned_cols=94  Identities=15%  Similarity=0.194  Sum_probs=58.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      +++|.|.||||++|..|++.|.++++   ++..+.-.. .....+.  +......+.  +.....+.++|+||-+++.  
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-saG~~~~--~~~~~~~~~--~~~~~~~~~~Dvvf~a~~~--   74 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-SAGKSLK--FKDQDITIE--ETTETAFEGVDIALFSAGS--   74 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-TTTCEEE--ETTEEEEEE--ECCTTTTTTCSEEEECSCH--
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-cCCCcce--ecCCCceEe--eCCHHHhcCCCEEEECCCh--
Confidence            35899999999999999998888766   444443211 1111111  111122332  2223346789999988752  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                      ..+...+..+.+.|+++|-.|+..
T Consensus        75 ----------------~~s~~~a~~~~~~G~~vIDlSa~~   98 (366)
T 3pwk_A           75 ----------------STSAKYAPYAVKAGVVVVDNTSYF   98 (366)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ----------------HhHHHHHHHHHHCCCEEEEcCCcc
Confidence                            113455666678888999888864

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.38  E-value=0.0014  Score=59.72  Aligned_cols=110  Identities=16%  Similarity=0.187  Sum_probs=73.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccc--cCCCceEEeeCcccccccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHH--FGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      ++++|.|+|+ |.+|..++..|+.+|.  +|..+|+++.....   .+.+.  +....+.+.. |. .+++.++|+||.+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~-~~a~~~aDvVvi~   81 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GE-YSDCHDADLVVIC   81 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CC-HHHhCCCCEEEEC
Confidence            4569999998 9999999999998884  89999886432211   11111  1112334443 32 5568899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +|...  ....+-..+...|..-...+.+.+.+...  .++.+|
T Consensus        82 ag~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           82 AGAAQ--KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             CCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            98632  22334456778899889999998888764  555544

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.37  E-value=0.00027  Score=62.95  Aligned_cols=74  Identities=16%  Similarity=0.328  Sum_probs=43.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEE-eCCCCCc-ccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGR-KENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l-~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ++++||.|+|++|.+|+.+++.+.+. +.++.++ ++..... .....+...... .+...+..++.+.++|+||.+.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~-gv~v~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQT-GVALTDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCC-SCBCBCCHHHHHHHCSEEEECS
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCC-CceecCCHHHHhcCCCEEEEcC
Confidence            45689999999999999999999886 5577664 5543211 111111111111 1111222333455789999875

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.36  E-value=0.00055  Score=58.65  Aligned_cols=68  Identities=15%  Similarity=0.207  Sum_probs=49.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~Ag  189 (340)
                      |+|+|+|+ |.+|.++++.|.++|++|++++++++.... +..   ..++.++.+|..++      .+.++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-l~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEE-FAK---KLKATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHH---HSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHH---HcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            57999995 999999999999999999999986432221 111   12456788887664      2567999997653

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.35  E-value=0.00052  Score=62.57  Aligned_cols=107  Identities=16%  Similarity=0.163  Sum_probs=70.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccc--cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHH--FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +||.|+|| |.+|..++..|+..+.  +|.++|+.......   .+.+.  +. ..+++.. | ..+++.++|+||..++
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~-~~~~v~~-~-~~~a~~~aDvVii~ag   81 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFT-APKKIYS-G-EYSDCKDADLVVITAG   81 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGS-CCCEEEE-C-CGGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhc-CCeEEEE-C-CHHHhCCCCEEEECCC
Confidence            69999998 9999999999998876  89999985432221   11111  11 2334443 3 3456889999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ....  ....-.+++..|+.-...+.+.+++...  .++.+|
T Consensus        82 ~~~~--~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           82 APQK--PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            6322  1222335677899999999999988864  566654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.34  E-value=0.0017  Score=59.23  Aligned_cols=109  Identities=14%  Similarity=0.129  Sum_probs=70.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc---cccccc--CCCceEEee-CcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE---NVMHHF--GNPNFELIR-HDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~---~~~~~~--~~~~~~~~~-~D~~~~~~~~~D~Vih~A  188 (340)
                      +++|.|+|| |.+|..++..|+..|+ +|.++|++++....   .+.+..  ......+.. .|.  +++.++|+||.++
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~--~al~~aD~Vi~a~   80 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY--DDLAGADVVIVTA   80 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG--GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH--HHhCCCCEEEEeC
Confidence            458999997 9999999999999998 99999987543221   111100  011222333 343  5688999999998


Q ss_pred             cCCCCCCCcCC-----hhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          189 CPASPVHYKFN-----PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       189 g~~~~~~~~~~-----~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      |....  ....     -..+...|+.-...+.+.+.+...  .+|.+|
T Consensus        81 g~p~k--~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           81 GFTKA--PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             SCSSC--TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCC--CCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            75321  1111     345567788888888887777643  555554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.34  E-value=8.3e-05  Score=69.37  Aligned_cols=76  Identities=16%  Similarity=0.176  Sum_probs=50.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++++|+|+|+ |.||..+++.|...|++|++++|+..... .....+... .++..+.+..++.+.++|+||++++.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~-~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ-YLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            356789999998 99999999999999999999998643221 111111111 11222222233455689999999874

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.33  E-value=7.2e-05  Score=63.81  Aligned_cols=69  Identities=17%  Similarity=0.185  Sum_probs=46.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC----CCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG----NPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |+|+|+||+|++|..+++.|++.|++|++++|+.+.... +.+...    ...+.  . +..++.+.++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~--~-~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEA-KAAEYRRIAGDASIT--G-MKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHH-HHHHHHHHHSSCCEE--E-EEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhccccccCCCC--h-hhHHHHHhcCCEEEEeCC
Confidence            479999999999999999999999999999986433221 111100    01122  1 222344567999999863

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.29  E-value=0.00043  Score=64.21  Aligned_cols=95  Identities=16%  Similarity=0.235  Sum_probs=58.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccc---cccCCCc-eEEeeCcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVM---HHFGNPN-FELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~---~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++++|.|.||+|++|+.+++.|.++.. +++++....... ....   ..+.... .++...+  +..+.++|+||.+++
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCC
Confidence            446899999999999999999998865 787776542211 1111   0111100 1111112  333458999999886


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCc
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~  231 (340)
                      ...                  +...+..+ +.|+++|-.|+.
T Consensus        92 ~~~------------------s~~~a~~~-~aG~~VId~sa~  114 (359)
T 1xyg_A           92 HGT------------------TQEIIKEL-PTALKIVDLSAD  114 (359)
T ss_dssp             TTT------------------HHHHHHTS-CTTCEEEECSST
T ss_pred             chh------------------HHHHHHHH-hCCCEEEECCcc
Confidence            321                  23455666 778888888884

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.29  E-value=0.00073  Score=62.45  Aligned_cols=97  Identities=10%  Similarity=0.079  Sum_probs=59.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCC----------CceEEeeCcccccccCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGN----------PNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +++|.|.||+|++|+.+++.|.++.. +|.++..+..............          ..+.+.+.|.  ..+.++|+|
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~vDvV   81 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNY--EDHKDVDVV   81 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSG--GGGTTCSEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCH--HHhcCCCEE
Confidence            46899999999999999999988754 7777752111111111100000          1222322232  234689999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      |-+.+.                  .....++..+.+.|+++|-.|+..
T Consensus        82 f~atp~------------------~~s~~~a~~~~~aG~~VId~s~~~  111 (350)
T 2ep5_A           82 LSALPN------------------ELAESIELELVKNGKIVVSNASPF  111 (350)
T ss_dssp             EECCCH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCCh------------------HHHHHHHHHHHHCCCEEEECCccc
Confidence            987652                  124457778888899988777753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.29  E-value=0.00012  Score=65.77  Aligned_cols=74  Identities=14%  Similarity=0.141  Sum_probs=50.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC----C---ceEEeeCcccccccCCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN----P---NFELIRHDVVEPLLLEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~----~---~~~~~~~D~~~~~~~~~D~Vi  185 (340)
                      +.++++++|+|++ .+|+.+++.|++.| +|++++|+.+... .+...+..    .   .+++.+  . .+.+.++|+||
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~-~l~~~~~~~~~~~~~~~~d~~~--~-~~~~~~~DilV  198 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAE-ALAKEIAEKLNKKFGEEVKFSG--L-DVDLDGVDIII  198 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHH-HHHHHHHHHHTCCHHHHEEEEC--T-TCCCTTCCEEE
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHH-HHHHHHhhhcccccceeEEEee--H-HHhhCCCCEEE
Confidence            4577899999985 99999999999999 9999998643221 11111100    0   233322  2 34567899999


Q ss_pred             EcccCCC
Q 019470          186 HLACPAS  192 (340)
Q Consensus       186 h~Ag~~~  192 (340)
                      |+++...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9998643

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.28  E-value=0.00086  Score=62.06  Aligned_cols=97  Identities=12%  Similarity=0.086  Sum_probs=58.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCC----------CceEEeeCcccccccC-CCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGN----------PNFELIRHDVVEPLLL-EVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~-~~D~V  184 (340)
                      ++|.|.||+|++|+.+++.|.+++ .+|.++.++.....+.+......          ..+.+...|. +.++. ++|+|
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~DvV   87 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDP-KHEEFEDVDIV   87 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCT-TSGGGTTCCEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCH-HHHhcCCCCEE
Confidence            589999999999999999998875 48887764322221111110000          1112222232 22335 89999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      |-+.+.                  .....++..+.+.|+++|-.|+..
T Consensus        88 ~~atp~------------------~~~~~~a~~~~~aG~~VId~s~~~  117 (354)
T 1ys4_A           88 FSALPS------------------DLAKKFEPEFAKEGKLIFSNASAY  117 (354)
T ss_dssp             EECCCH------------------HHHHHHHHHHHHTTCEEEECCSTT
T ss_pred             EECCCc------------------hHHHHHHHHHHHCCCEEEECCchh
Confidence            988752                  113345666777888887777653

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.26  E-value=0.00029  Score=62.80  Aligned_cols=73  Identities=15%  Similarity=0.295  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCC-CceEEeeCccccccc--CCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGN-PNFELIRHDVVEPLL--LEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~--~~~D~Vih~Ag  189 (340)
                      ..++++++|+|+ |.+|+.++..|++.|.+|++.+|+.+...+ +...+.. ..++....+    .+  .++|+||++++
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~-l~~~~~~~~~~~~~~~~----~~~~~~~DivIn~t~  189 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKE-LAERFQPYGNIQAVSMD----SIPLQTYDLVINATS  189 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHH-HHHHHGGGSCEEEEEGG----GCCCSCCSEEEECCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHccccCCeEEeeHH----HhccCCCCEEEECCC
Confidence            456789999997 889999999999999999999997543222 2111110 123332221    22  37999999987


Q ss_pred             CC
Q 019470          190 PA  191 (340)
Q Consensus       190 ~~  191 (340)
                      ..
T Consensus       190 ~~  191 (272)
T 1p77_A          190 AG  191 (272)
T ss_dssp             C-
T ss_pred             CC
Confidence            53

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.26  E-value=0.0018  Score=59.44  Aligned_cols=94  Identities=14%  Similarity=0.153  Sum_probs=60.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC---CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG---DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      +++|.|.||+|++|+.+++.|++++   .+++++...... ...+.  +....+.+.+.|  ...+.++|+||-+.+.  
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~--~~~~~i~~~~~~--~~~~~~vDvVf~a~g~--   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR--FNGKTVRVQNVE--EFDWSQVHIALFSAGG--   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE--ETTEEEEEEEGG--GCCGGGCSEEEECSCH--
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee--ecCceeEEecCC--hHHhcCCCEEEECCCc--
Confidence            5689999999999999999999984   366666532111 11111  122233333333  2234689999988752  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                      ..+...+..+.+.|+++|-.|+..
T Consensus        76 ----------------~~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           76 ----------------ELSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ----------------hHHHHHHHHHHHcCCEEEEcCCcc
Confidence                            124456677778899888888864

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.24  E-value=0.00082  Score=61.58  Aligned_cols=95  Identities=21%  Similarity=0.166  Sum_probs=57.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHY  196 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~~  196 (340)
                      ++|.|.||+|++|+.+++.|.++++.+..+............-.+....+++.+.|.. + + ++|+||-+.|.      
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~~~-~-~-~~DvV~~a~g~------   71 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEG-P-L-PVDLVLASAGG------   71 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECCSS-C-C-CCSEEEECSHH------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCChh-h-c-CCCEEEECCCc------
Confidence            4799999999999999999998877433221110101010000112224555555432 3 4 89999998762      


Q ss_pred             cCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          197 KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       197 ~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                  ..+........+.|+++|-.|+..
T Consensus        72 ------------~~s~~~a~~~~~~G~~vId~s~~~   95 (331)
T 2yv3_A           72 ------------GISRAKALVWAEGGALVVDNSSAW   95 (331)
T ss_dssp             ------------HHHHHHHHHHHHTTCEEEECSSSS
T ss_pred             ------------cchHHHHHHHHHCCCEEEECCCcc
Confidence                        123345566667788999888863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.24  E-value=0.0001  Score=67.59  Aligned_cols=75  Identities=19%  Similarity=0.247  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc----cCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL----LLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~----~~~~D~Vih~A  188 (340)
                      .++++|||+||+|.||..+++.+...|++|+++++++.... .....+... .++..+.|..+..    -.++|+||+++
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  226 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCR-FLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNV  226 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECC
Confidence            35789999999999999999999999999999998643222 110122211 1222222222211    13699999998


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       227 g  227 (336)
T 4b7c_A          227 G  227 (336)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.23  E-value=0.0002  Score=65.98  Aligned_cols=39  Identities=28%  Similarity=0.262  Sum_probs=34.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      ..+++|||+|++|.||..+++.+...|.+|++++++...
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~  206 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGK  206 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHH
Confidence            357799999999999999999999999999999986543

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.22  E-value=0.0008  Score=61.71  Aligned_cols=98  Identities=12%  Similarity=0.133  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCC--Ccccccc---cccCC-CceEEeeC-ccccccc-CCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFT--GRKENVM---HHFGN-PNFELIRH-DVVEPLL-LEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~--~~~~~~~---~~~~~-~~~~~~~~-D~~~~~~-~~~D~Vi  185 (340)
                      .|++|.|.||||++|..|++.|.++ ..++..+.....  .....+.   ..+.. ....+.+. |.  ..+ .++|+||
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~--~~~~~~~Dvvf   80 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDI--SEFSPGVDVVF   80 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSG--GGTCTTCSEEE
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCH--HHHhcCCCEEE
Confidence            3579999999999999999999985 457877755431  1111111   11211 12333322 22  233 7899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      -+.+.                  ..+..++..+.+.|+++|-.|+..
T Consensus        81 ~a~p~------------------~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           81 LATAH------------------EVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             ECSCH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ECCCh------------------HHHHHHHHHHHHCCCEEEEcCCcc
Confidence            87642                  113455666678889999999864

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.22  E-value=0.00011  Score=68.09  Aligned_cols=34  Identities=26%  Similarity=0.163  Sum_probs=31.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      ++|+|+||+|.||..+++.+...|+ +|++++++.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~  196 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH  196 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH
Confidence            7999999999999999999999999 999999864

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.20  E-value=0.0025  Score=59.11  Aligned_cols=113  Identities=12%  Similarity=0.013  Sum_probs=72.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC--e---EEEEeCCCCCccc-------ccccccCCCceEEeeCcccccccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD--S---VIVVDNFFTGRKE-------NVMHHFGNPNFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~---V~~l~r~~~~~~~-------~~~~~~~~~~~~~~~~D~~~~~~~~~D~  183 (340)
                      ++||.|+||+|.||.+++-.|+..+.  +   |...+...+...+       .+.+......-.+.-.+-....+.++|+
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~daDv  111 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW  111 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCCCE
Confidence            45899999999999999999998764  2   6655443222111       1111110011112212223457889999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-C--CeEEEEeC
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G--ARFLLTST  230 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~--~~~i~~SS  230 (340)
                      ||-+||..  .....+-.+++..|..-...+.+.+.+. +  +.++.+|-
T Consensus       112 VVitag~p--rkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          112 ALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             EEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            99999853  2233456778899999999999999875 4  36777664

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.00013  Score=67.42  Aligned_cols=74  Identities=19%  Similarity=0.264  Sum_probs=48.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCccccc---cc--CCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP---LL--LEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~---~~--~~~D~Vih~  187 (340)
                      ..+++|+|+||+|.||..+++.+...|++|+++++++....  ....+... .++..+.|..+.   ..  .++|+||++
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  246 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK--IVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEM  246 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH--HHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence            35779999999999999999999999999999998643322  11122211 112111222111   11  269999999


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       247 ~G  248 (351)
T 1yb5_A          247 LA  248 (351)
T ss_dssp             CH
T ss_pred             CC
Confidence            87

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.17  E-value=0.0014  Score=59.56  Aligned_cols=110  Identities=18%  Similarity=0.203  Sum_probs=71.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccccC--CCceEEeeCcccccccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHHFG--NPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~~~--~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      ++++|.|+|+ |.+|..++..|+..|.  +|+++|++......   .+.+...  ...+.+.. | ..+++.++|+||.+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~-~~~al~~aDvViia   81 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G-DYDDCRDADLVVIC   81 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C-CGGGTTTCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C-cHHHhCCCCEEEEc
Confidence            4569999998 9999999999988774  89999987532211   1111111  11344443 2 23568899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ++......  ..-.+.+..|..-...+++.+.+...  .++.+|
T Consensus        82 ~~~~~~~g--~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           82 AGANQKPG--ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             CSCCCCTT--TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             CCCCCCCC--CCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            98643222  22345667888888888888877653  455443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.0001  Score=67.37  Aligned_cols=73  Identities=19%  Similarity=0.152  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc---c--CCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL---L--LEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~---~--~~~D~Vih~A  188 (340)
                      .+++|+|+||+|.||..+++.+...|++|+++++++.... ... .+... .++..+.|..+..   .  .++|+||+++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~-~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~  217 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SAL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSV  217 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH-HHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH-HcCCCEEEECCCccHHHHHHHHhCCCCceEEEECC
Confidence            5779999999999999999999999999999998643221 111 12111 1121122221111   1  2699999999


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       218 g  218 (327)
T 1qor_A          218 G  218 (327)
T ss_dssp             C
T ss_pred             c
Confidence            7

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.13  E-value=0.00014  Score=67.38  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=48.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCccccc---cc--CCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP---LL--LEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~---~~--~~~D~Vih~  187 (340)
                      ..+++|+|+||+|.||..+++.+...|++|+++++++..... . ..+... .++..+.|..+.   ..  .++|+||++
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  238 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-A-EKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDC  238 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-H-HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H-HHcCCcEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence            357899999999999999999999999999999986432211 1 112211 112111222111   11  369999999


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       239 ~G  240 (354)
T 2j8z_A          239 IG  240 (354)
T ss_dssp             SC
T ss_pred             CC
Confidence            97

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.12  E-value=0.0039  Score=56.96  Aligned_cols=108  Identities=12%  Similarity=0.043  Sum_probs=70.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc---ccccc---c-CCCceEEeeCcccccccCCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE---NVMHH---F-GNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~---~~~~~---~-~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .++|.|+|| |.+|..++..|+..|+ +|.++|++.+....   .+.+.   . ...++... .|.  +++.++|+||-+
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~--~al~~aD~VI~a   89 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY--EYLQNSDVVIIT   89 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH--HHHCCCCEEEEc
Confidence            358999997 9999999999999999 99999997543321   11111   0 11222221 343  568899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +|....  ....-.++...|+.-...+.+.+.+...  .+|.+|
T Consensus        90 vg~p~k--~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           90 AGVPRK--PNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             CSCCCC--TTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCCCCC--CCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            875321  1112234566788888888887776543  455554

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.12  E-value=0.0002  Score=65.91  Aligned_cols=37  Identities=19%  Similarity=0.167  Sum_probs=33.5

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..+++|||+||+|.||..+++.+...|++|++++++.
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~  190 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK  190 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            3578999999999999999999999999999999864

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.12  E-value=0.00016  Score=57.81  Aligned_cols=70  Identities=16%  Similarity=0.290  Sum_probs=49.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +++|+|+|+ |.+|..+++.|.+.|++|++.+|+...... +...+   ..+....+...+.+.++|+||.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~-~a~~~---~~~~~~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRA-FAEKY---EYEYVLINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHH-HHHHH---TCEEEECSCHHHHHHTCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHH-HHHHh---CCceEeecCHHHHhcCCCEEEEeCCC
Confidence            669999995 999999999999999999899886443222 22221   13444444445566789999998764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.11  E-value=0.00032  Score=63.38  Aligned_cols=77  Identities=16%  Similarity=0.140  Sum_probs=51.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ..++++++|+|+ |.+|+.++..|++.|. +|++++|+.+... .+...+.....++...+...+.+.++|+||++.+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~-~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAE-RLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHH-HHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence            456789999996 8899999999999998 9999998643322 222222110002222222334567899999998753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.06  E-value=0.00014  Score=66.60  Aligned_cols=74  Identities=19%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCccccc---c--cCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP---L--LLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~---~--~~~~D~Vih~  187 (340)
                      ..+++|+|+||+|.||..+++.+...|++|++++++..... ... .+... .++..+.|..+.   .  -.++|+||++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~-~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAE-TAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHH-HHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-HcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            35679999999999999999999999999999998643221 111 12211 112111222111   1  1369999999


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       222 ~g  223 (333)
T 1wly_A          222 IG  223 (333)
T ss_dssp             SC
T ss_pred             Cc
Confidence            97

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.04  E-value=0.001  Score=58.44  Aligned_cols=101  Identities=15%  Similarity=0.120  Sum_probs=63.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc-----------------c-ccccccc----CCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR-----------------K-ENVMHHF----GNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~-----------------~-~~~~~~~----~~~~~~~~~  170 (340)
                      +++++|+|.| .|.+|.++++.|++.|. +|+++|+..-..                 + +...+.+    ....++.+.
T Consensus        29 l~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            4566999999 58999999999999997 888888864110                 0 0010111    112344444


Q ss_pred             Ccccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          171 HDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       171 ~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      .++.+    ..+.++|+||.+..                 |...-..+.++|++.++.+|+.+..+
T Consensus       108 ~~~~~~~~~~~~~~~DvVi~~~d-----------------~~~~~~~l~~~~~~~~~p~i~~~~~g  156 (249)
T 1jw9_B          108 ALLDDAELAALIAEHDLVLDCTD-----------------NVAVRNQLNAGCFAAKVPLVSGAAIR  156 (249)
T ss_dssp             SCCCHHHHHHHHHTSSEEEECCS-----------------SHHHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred             ccCCHhHHHHHHhCCCEEEEeCC-----------------CHHHHHHHHHHHHHcCCCEEEeeecc
Confidence            44432    24568999998752                 22233456778888888788776544

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.04  E-value=0.0019  Score=51.20  Aligned_cols=67  Identities=18%  Similarity=0.160  Sum_probs=49.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~Ag  189 (340)
                      ++|+|.|+ |.+|..+++.|.+.|++|++++++++.... +    ...++.++.+|..++.      +.++|.||-+.+
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~----~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE-L----RERGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-H----HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-H----HHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            37999995 999999999999999999999986433221 1    1235677888876642      357899997653

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.04  E-value=0.0027  Score=57.66  Aligned_cols=109  Identities=14%  Similarity=0.039  Sum_probs=69.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccc---ccc---c-CCCceEEeeCcccccccCCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENV---MHH---F-GNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~---~~~---~-~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .++|.|.|+ |.+|..++..|++.|+ +|++++++++......   .+.   . ...++... .|.  ..+.++|+||-+
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~--~a~~~aDiVi~a   79 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DDY--ADISGSDVVIIT   79 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CCH--HHhCCCCEEEEe
Confidence            358999997 9999999999999998 9999999754332210   000   0 01122221 333  467899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ++....  ....-.+....|......+++.+.+...  .++.+|.
T Consensus        80 vg~p~~--~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           80 ASIPGR--PKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             CCCSSC--CSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCCCCC--CCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            875332  2223334556677777777777766543  4555554

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.03  E-value=0.001  Score=59.17  Aligned_cols=73  Identities=10%  Similarity=0.205  Sum_probs=49.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +.++++++|+|+ |.+|+.++..|.+.|. +|++++|+.+...+ +...+....+.....+....  .++|+|||+..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~-la~~~~~~~~~~~~~~~l~~--~~~DivInaTp  190 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALA-LRNELDHSRLRISRYEALEG--QSFDIVVNATS  190 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHH-HHHHHCCTTEEEECSGGGTT--CCCSEEEECSS
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhccCCeeEeeHHHhcc--cCCCEEEECCC
Confidence            457889999996 8999999999999996 99999986543222 22222212344444332222  67999999764

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.02  E-value=0.005  Score=56.53  Aligned_cols=93  Identities=22%  Similarity=0.142  Sum_probs=59.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeC-CCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDN-FFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      +++|.|.||||++|..|++.|.++.+   ++..+.- +..+..  +.  +..  .++...+.....+.++|+||-+.+. 
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~--~~--~~~--~~~~~~~~~~~~~~~~Dvvf~a~~~-   73 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRK--LA--FRG--QEIEVEDAETADPSGLDIALFSAGS-   73 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCE--EE--ETT--EEEEEEETTTSCCTTCSEEEECSCH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCc--ee--ecC--CceEEEeCCHHHhccCCEEEECCCh-
Confidence            35899999999999999998888754   4555542 211111  11  111  2333333333456789999988752 


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                       ..+......+.+.|+++|-.|+..
T Consensus        74 -----------------~~s~~~a~~~~~~G~~vID~Sa~~   97 (344)
T 3tz6_A           74 -----------------AMSKVQAPRFAAAGVTVIDNSSAW   97 (344)
T ss_dssp             -----------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             -----------------HHHHHHHHHHHhCCCEEEECCCcc
Confidence                             123455666677888988888854

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.01  E-value=0.00033  Score=68.35  Aligned_cols=74  Identities=14%  Similarity=0.160  Sum_probs=44.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeC-cccccccCCCCEEEEcccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ..++++++|||| |++|+.++..|++.|.+|++++|+.+... .+...+..   ++... |+.+-...++|++|||+|..
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~-~la~~~~~---~~~~~~dl~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERAL-ELAEAIGG---KALSLTDLDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHH-HHHHHTTC----CEETTTTTTC--CCSEEEEECSSTT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHcCC---ceeeHHHhhhccccCceEEEECCCCC
Confidence            356789999998 79999999999999999999998643322 22222211   11111 22111223589999999864

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.00  E-value=0.0021  Score=58.58  Aligned_cols=108  Identities=14%  Similarity=0.110  Sum_probs=69.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccc---ccccC-CCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHHFG-NPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |+|.|+|+ |.+|..++..|++.|+  +|+++++++.......   .+... .....+...|  .+.+.++|+||-+++.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d--~~~~~~aDvViiav~~   77 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAGV   77 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC--HHHhCCCCEEEEccCC
Confidence            48999997 9999999999999999  9999998643221111   00000 0112232234  3457899999998874


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  .....-.++...|+.....+++.+.+...  .+|.+|
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           78 PQ--KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             CC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            32  11223445667788888888888877543  455544

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.98  E-value=0.0061  Score=55.02  Aligned_cols=108  Identities=19%  Similarity=0.192  Sum_probs=70.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccccc--ccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ++++|.|+|| |.+|..++..|+.+|.  +|..+|+++. ......+  .....++... .|.  +++.++|+||-.+|.
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t-~d~--~~l~~aD~Vi~aag~   87 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIFNLPNVEIS-KDL--SASAHSKVVIFTVNS   87 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHHTCTTEEEE-SCG--GGGTTCSEEEECCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEe-CCH--HHHCCCCEEEEcCCC
Confidence            4568999995 9999999999999998  9999999764 2211110  1222344443 453  568899999999986


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                      ..   ....-.++...|+.-...+++.+.+...  .++.+|-
T Consensus        88 ~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           88 LG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            32   1234456677888888888888877543  5555553

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.97  E-value=0.00049  Score=62.55  Aligned_cols=78  Identities=9%  Similarity=0.085  Sum_probs=50.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCC--Cccccccccc---CCCceEEeeCcc---cccccCCCC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT--GRKENVMHHF---GNPNFELIRHDV---VEPLLLEVD  182 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~--~~~~~~~~~~---~~~~~~~~~~D~---~~~~~~~~D  182 (340)
                      .+.++++++|+|+ |.+|+.++..|.+.|. +|++++|+.+  .+.+.+...+   ....+.....+.   ..+.+.++|
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD  228 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV  228 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence            3567889999996 8999999999999998 8999999732  1111111111   112234444332   223456899


Q ss_pred             EEEEcccC
Q 019470          183 QIYHLACP  190 (340)
Q Consensus       183 ~Vih~Ag~  190 (340)
                      +|||+...
T Consensus       229 iIINaTp~  236 (315)
T 3tnl_A          229 IFTNATGV  236 (315)
T ss_dssp             EEEECSST
T ss_pred             EEEECccC
Confidence            99997653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.97  E-value=0.00052  Score=61.49  Aligned_cols=76  Identities=17%  Similarity=0.168  Sum_probs=51.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccccccc----CCCceEEeeCcccccccCCCCEEEEc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHF----GNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      ..++++++|+|+ |.+|+.++..|.+.|. +|++++|+.+...+ +...+    ....+.....+...+.+.++|+|||+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~-la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVIna  201 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQA-LADVINNAVGREAVVGVDARGIEDVIAAADGVVNA  201 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHH-HHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEEC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-HHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEEC
Confidence            457889999997 8999999999999998 79999987543322 11111    11233344333444556679999997


Q ss_pred             ccC
Q 019470          188 ACP  190 (340)
Q Consensus       188 Ag~  190 (340)
                      ...
T Consensus       202 Tp~  204 (283)
T 3jyo_A          202 TPM  204 (283)
T ss_dssp             SST
T ss_pred             CCC
Confidence            653

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.97  E-value=0.0041  Score=56.36  Aligned_cols=106  Identities=18%  Similarity=0.148  Sum_probs=66.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcc--cc-cccccC-CCceEEeeCcccccccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRK--EN-VMHHFG-NPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~--~~-~~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .++|+|.|.|+ |.+|..++..|++.|+  +|.+++++.....  .. +.+... .....+...+. ...+.++|+||-+
T Consensus         5 ~~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~   82 (319)
T 1lld_A            5 VKPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVIT   82 (319)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEEC
Confidence            34579999997 9999999999999999  9999998643221  00 111110 01223322211 2456789999998


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA  223 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~  223 (340)
                      ++...  ....+-.++...|+.....+++..++.+.
T Consensus        83 v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~  116 (319)
T 1lld_A           83 AGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAP  116 (319)
T ss_dssp             CCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            86422  12234456677888877788877776543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.96  E-value=0.00088  Score=59.92  Aligned_cols=73  Identities=15%  Similarity=0.211  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccC-CCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++++++|+|+ |.+|+.++..|++.|. +|++++|+.+...+ +...+. ...+.....+..   ..++|+||++...
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~-la~~~~~~~~~~~~~~~~l---~~~aDiIInaTp~  197 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQ-LAELVAAYGEVKAQAFEQL---KQSYDVIINSTSA  197 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHH-HHHHHGGGSCEEEEEGGGC---CSCEEEEEECSCC
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHH-HHHHhhccCCeeEeeHHHh---cCCCCEEEEcCcC
Confidence            457889999996 8899999999999996 99999996543222 111111 112344333222   2679999997653

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.93  E-value=0.0008  Score=57.63  Aligned_cols=66  Identities=15%  Similarity=0.178  Sum_probs=45.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++++|.|+| +|.+|..+++.|.+.|++|++++|+.+... .+..    ..+...  + ..+.+.++|+||.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~-~~~~----~g~~~~--~-~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTA-RLFP----SAAQVT--F-QEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHH-HHSB----TTSEEE--E-HHHHTTSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH----cCCcee--c-HHHHHhCCCEEEECCC
Confidence            457899999 899999999999999999999998643221 1111    123332  2 2234678999998764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.93  E-value=0.00076  Score=60.19  Aligned_cols=70  Identities=17%  Similarity=0.129  Sum_probs=49.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +.++++++|+|+ |.+|+.++..|.+.|. +|++++|+.+...+..      ..+.....+.....+.++|+||++..
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la------~~~~~~~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS------LNINKINLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC------SCCEEECHHHHHHTGGGCSEEEECCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH------HhcccccHhhHHHHhcCCCEEEECcc
Confidence            456789999996 8999999999999998 8999998754322211      12233333333445678999998764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.88  E-value=0.0032  Score=57.00  Aligned_cols=111  Identities=17%  Similarity=0.136  Sum_probs=68.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCccccc---ccc--cCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKENV---MHH--FGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~~---~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ||+|.|.| +|.+|..++..|++.|  ++|++++++........   .+.  .....+.+...|.  +.+.++|+||-++
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~--~~~~~aDvViiav   77 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW--AALADADVVISTL   77 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG--GGGTTCSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH--HHhCCCCEEEEec
Confidence            36899999 7999999999999999  79999999643221111   000  0111234433454  5678999999988


Q ss_pred             cCCCCCC--CcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          189 CPASPVH--YKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       189 g~~~~~~--~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +......  ....-..+...|+.-...+++.+.+...  .++.++
T Consensus        78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            6422100  1112234566788878888888777543  444433

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.83  E-value=0.00058  Score=63.39  Aligned_cols=74  Identities=23%  Similarity=0.306  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeC--cccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH--DVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~--D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .++++|+|+|+ |.+|..+++.|...|.+|++++|+...... ...... ..+.....  +...+.+.++|+||++++.
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHhhC-ceeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            45579999998 999999999999999999999986433221 111111 11222211  1223345689999999875

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.82  E-value=0.0058  Score=55.33  Aligned_cols=107  Identities=13%  Similarity=0.110  Sum_probs=72.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccccc---ccc--cCCCceEEee-CcccccccCCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENV---MHH--FGNPNFELIR-HDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~---~~~--~~~~~~~~~~-~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ||.|+|| |.+|..++..|+..|. +|..+|+.........   .+.  .......+.. .|.  +++.++|+||..+|.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~~ag~   77 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY--EDMRGSDIVLVTAGI   77 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG--GGGTTCSEEEECCSC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH--HHhCCCCEEEEeCCC
Confidence            5889998 9999999999998887 7999998754332111   110  0011233333 443  578999999999886


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  .....-..+...|+.-...+++.+.+...  .+|.+|
T Consensus        78 ~~--k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           78 GR--KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             CC--CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            43  22334456678899989999998887653  666665

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.80  E-value=0.00043  Score=63.35  Aligned_cols=74  Identities=22%  Similarity=0.266  Sum_probs=48.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCccccc---c--cCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP---L--LLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~---~--~~~~D~Vih~  187 (340)
                      .++++|||+||+|.||...++.+...|.+|++++++.....  ....+... .++..+.|..+.   .  -.++|+||++
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~--~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK--IAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH--HHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH--HHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            35679999999999999999999999999999998543222  11222211 111112222221   1  1369999999


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       225 ~g  226 (334)
T 3qwb_A          225 VG  226 (334)
T ss_dssp             CG
T ss_pred             CC
Confidence            97

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.80  E-value=0.00046  Score=63.77  Aligned_cols=74  Identities=16%  Similarity=0.206  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc----cCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL----LLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~----~~~~D~Vih~A  188 (340)
                      ..+++|+|+||+|.||..+++.+...|.+|+++++++.... ... .+... .++..+.|..+..    -.++|+||+++
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~-~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACE-RLGAKRGINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH-HHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHH-hcCCCEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            35779999999999999999999999999999998643322 111 12211 1222222222211    13699999999


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       244 g  244 (353)
T 4dup_A          244 G  244 (353)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.76  E-value=0.0022  Score=55.27  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=58.6

Q ss_pred             CCCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEE
Q 019470          107 KIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       107 ~~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      -.|.-.+.++++|||.|| |-+|...++.|++.|.+|++++.....   .+.......++.++..+.....+.++|.||-
T Consensus        22 ~~Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~---~l~~l~~~~~i~~i~~~~~~~dL~~adLVIa   97 (223)
T 3dfz_A           22 MYTVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSA---EINEWEAKGQLRVKRKKVGEEDLLNVFFIVV   97 (223)
T ss_dssp             CCEEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCH---HHHHHHHTTSCEEECSCCCGGGSSSCSEEEE
T ss_pred             ccccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCH---HHHHHHHcCCcEEEECCCCHhHhCCCCEEEE
Confidence            345556789999999995 899999999999999999999864322   2222222346777777777778889999995


Q ss_pred             cc
Q 019470          187 LA  188 (340)
Q Consensus       187 ~A  188 (340)
                      +.
T Consensus        98 AT   99 (223)
T 3dfz_A           98 AT   99 (223)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=96.74  E-value=0.00089  Score=60.32  Aligned_cols=71  Identities=15%  Similarity=0.118  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEee-CcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIR-HDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~-~D~~~~~~~~~D~Vih~Ag  189 (340)
                      .+.+|+|+|++|.+|..+++.+...|.+|+++++++..... . ..+.... ++..+ .|.. +.+.++|+||+ +|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~-~~~ga~~~~~~~~~~~~~-~~~~~~d~vid-~g  197 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-P-LALGAEEAATYAEVPERA-KAWGGLDLVLE-VR  197 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-H-HHTTCSEEEEGGGHHHHH-HHTTSEEEEEE-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-H-HhcCCCEEEECCcchhHH-HHhcCceEEEE-CC
Confidence            56799999999999999999999999999999986543322 1 1222111 11111 1222 22367999999 87

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.69  E-value=0.0014  Score=60.23  Aligned_cols=74  Identities=22%  Similarity=0.219  Sum_probs=48.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc---cc--CCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP---LL--LEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~--~~~D~Vih~A  188 (340)
                      ..+++|||+||+|.||...++.+...|.+|++++++..... .. ..+....+.-...|..+.   ..  .++|+||+++
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~-~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~  235 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATE-FV-KSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPI  235 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HH-HHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH-HhcCCcEEecCchhHHHHHHHHhCCCCceEEEECC
Confidence            35789999999999999999999999999999998654332 11 122222111111222211   11  2699999999


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       236 g  236 (342)
T 4eye_A          236 G  236 (342)
T ss_dssp             C
T ss_pred             c
Confidence            7

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.69  E-value=0.0034  Score=58.06  Aligned_cols=96  Identities=16%  Similarity=0.119  Sum_probs=57.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccC----------CCceEEeeCcccccccCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG----------NPNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +++|.|.||||++|..|++.|.++.+ ++..+..... ....+.....          .....+...|  ...+.++|+|
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~~~--~~~~~~vDvv   83 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKPTD--PKLMDDVDII   83 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEECC--GGGCTTCCEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEeCC--HHHhcCCCEE
Confidence            45899999999999999997777643 6666643211 1111111000          0012222222  2335689999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      |-+.+...                  ...+...+.+.|+++|-.|+..
T Consensus        84 f~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpl_A           84 FSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             EECCCTTT------------------HHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChHH------------------HHHHHHHHHHCCCEEEEcCCCc
Confidence            98875311                  2245566677889999999864

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.69  E-value=0.0034  Score=58.06  Aligned_cols=96  Identities=16%  Similarity=0.119  Sum_probs=57.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccC----------CCceEEeeCcccccccCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFG----------NPNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +++|.|.||||++|..|++.|.++.+ ++..+..... ....+.....          .....+...|  ...+.++|+|
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~~~--~~~~~~vDvv   83 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKPTD--PKLMDDVDII   83 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEECC--GGGCTTCCEE
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEeCC--HHHhcCCCEE
Confidence            45899999999999999997777643 6666643211 1111111000          0012222222  2335689999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      |-+.+...                  ...+...+.+.|+++|-.|+..
T Consensus        84 f~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~  113 (359)
T 4dpk_A           84 FSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDH  113 (359)
T ss_dssp             EECCCTTT------------------HHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChHH------------------HHHHHHHHHHCCCEEEEcCCCc
Confidence            98875311                  2245566677889999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.68  E-value=0.00078  Score=61.81  Aligned_cols=74  Identities=11%  Similarity=0.096  Sum_probs=48.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc-----cCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL-----LLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~-----~~~~D~Vih~  187 (340)
                      .++.+|+|+||+|.||...++.+...|.+|++++++...... .. .+... .++....|..+..     -.++|+||++
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~-~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE-LL-RLGAAYVIDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HH-HHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH-hCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            357799999999999999999888889999999986554321 11 12211 1222222222211     1369999999


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       221 ~g  222 (340)
T 3gms_A          221 IG  222 (340)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.63  E-value=0.001  Score=62.11  Aligned_cols=76  Identities=16%  Similarity=0.115  Sum_probs=49.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ...+++|+|+|+ |.||..+++.+...|.+|++++++..... .....+... ..+....+..++.+.++|+||++++.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~-~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLR-QLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHH-HHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence            456789999997 99999999999999999999998643221 111111111 11111122233445679999998864

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.63  E-value=0.0058  Score=54.59  Aligned_cols=74  Identities=16%  Similarity=0.215  Sum_probs=42.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEE-eCCCCC-cccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTG-RKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l-~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +++||.|.|++|.+|+.+++.+.+. +.++.++ ++..+. ......+........+...+-.++.+.++|+||.+.
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT   96 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFS   96 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECS
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcC
Confidence            3458999999999999999998876 5576665 543221 111111111111112222223344556789998765

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.62  E-value=0.00058  Score=62.26  Aligned_cols=74  Identities=19%  Similarity=0.155  Sum_probs=48.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc---c--CCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL---L--LEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~---~--~~~D~Vih~  187 (340)
                      .++++|+|+||+|.||...++.+...|.+|+++++++.... ... .+... .++..+.|..+..   .  .++|+||++
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~-~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAK-ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHH-HHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-HcCCCEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            35779999999999999999999889999999998543222 111 22211 1222222222211   1  369999999


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       217 ~g  218 (325)
T 3jyn_A          217 VG  218 (325)
T ss_dssp             SC
T ss_pred             CC
Confidence            87

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.60  E-value=0.0045  Score=53.40  Aligned_cols=64  Identities=8%  Similarity=0.022  Sum_probs=48.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~A  188 (340)
                      ++++|+|+ |.+|..+++.|.+.|+ |++++++++... ..    . .++.++.+|..++      .+.++|.||.+.
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~-~~----~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R-SGANFVHGDPTRVSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHH-HH----H-TTCEEEESCTTCHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHH-HH----h-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcC
Confidence            47999996 9999999999999999 999987543221 11    1 3467888887664      256799999765

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.60  E-value=0.01  Score=51.73  Aligned_cols=32  Identities=25%  Similarity=0.342  Sum_probs=27.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDN  148 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r  148 (340)
                      ++|+|.|++|.+|+.+++.+.+. |+++.++..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d   33 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELD   33 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEc
Confidence            48999999999999999999876 888886654

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.59  E-value=0.00063  Score=62.53  Aligned_cols=73  Identities=14%  Similarity=0.094  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCccccc---cc--CCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEP---LL--LEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~---~~--~~~D~Vih~A  188 (340)
                      .+++|||+|++|.+|..+++.+...|++|+++++++..... .. .+.... ++..+.|..+.   ..  .++|+||+++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~~-~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  243 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR-AK-ALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHT  243 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HH-HHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-hcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            57799999999999999999999999999999986432221 11 122111 12111222111   11  3699999999


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       244 g  244 (343)
T 2eih_A          244 G  244 (343)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.55  E-value=0.0029  Score=56.48  Aligned_cols=65  Identities=14%  Similarity=0.252  Sum_probs=45.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +|+|.|.|+||.+|..+++.|++.|++|++.+|+...... +.. .   .++.  .+ ..+.+.++|+||-+.
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~-~---g~~~--~~-~~~~~~~aDvVi~av   75 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR-LQG-M---GIPL--TD-GDGWIDEADVVVLAL   75 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH-HHH-T---TCCC--CC-SSGGGGTCSEEEECS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHh-c---CCCc--CC-HHHHhcCCCEEEEcC
Confidence            4699999999999999999999999999999886432221 111 1   1221  12 234566899999865

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.54  E-value=0.015  Score=53.44  Aligned_cols=104  Identities=13%  Similarity=0.178  Sum_probs=66.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc------------------c----ccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK------------------E----NVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~----~~~~~~~~~~~~~~~  170 (340)
                      ++..+|+|.| .|.+|.++++.|+..|. +++++|...-...                  +    .+...-....++.+.
T Consensus        34 L~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            4556899999 58899999999999998 8888865321100                  0    000000112345555


Q ss_pred             Cccc---ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          171 HDVV---EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       171 ~D~~---~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      .++.   ...+.++|+||.+.                 .|...-..+.++|.+.++.+|..++.+.+|
T Consensus       113 ~~~~~~~~~~~~~~dvVv~~~-----------------d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          113 EDIEKKPESFFTQFDAVCLTC-----------------CSRDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             SCGGGCCHHHHTTCSEEEEES-----------------CCHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             cccCcchHHHhcCCCEEEEcC-----------------CCHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            4442   23456899999764                 233444567888999998898887766555

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.54  E-value=0.00097  Score=61.34  Aligned_cols=74  Identities=20%  Similarity=0.210  Sum_probs=47.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCC-ceEEeeCcc---ccccc--CCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDV---VEPLL--LEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~---~~~~~--~~~D~Vih  186 (340)
                      ..+++|+|+|++|.||..+++.+... |.+|+++++++.... .. ..+... .++..+.|.   ..+..  .++|+||+
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~-~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  246 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AA-KRAGADYVINASMQDPLAEIRRITESKGVDAVID  246 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HH-HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HH-HHhCCCEEecCCCccHHHHHHHHhcCCCceEEEE
Confidence            35679999999999999999999998 999999998643221 11 112211 112112222   11112  36999999


Q ss_pred             ccc
Q 019470          187 LAC  189 (340)
Q Consensus       187 ~Ag  189 (340)
                      ++|
T Consensus       247 ~~g  249 (347)
T 1jvb_A          247 LNN  249 (347)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            997

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.50  E-value=0.0018  Score=60.11  Aligned_cols=74  Identities=20%  Similarity=0.242  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.+|+|+|+ |.||...++.+...|.+|+++++++..... ....+.... ++..+.+...+...++|+||+++|.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEE-ALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHH-HHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence            6789999996 999999999999999999999986543221 111222111 1111111222233579999999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.50  E-value=0.00096  Score=61.82  Aligned_cols=37  Identities=22%  Similarity=0.132  Sum_probs=33.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..+.+|||+||+|.||..+++.+...|++|+++++++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~  198 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD  198 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH
Confidence            3577999999999999999999999999999999864

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.50  E-value=0.0053  Score=54.38  Aligned_cols=65  Identities=17%  Similarity=0.114  Sum_probs=46.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +++++|+|+ |..|+.++..|++.|.+|++++|+.+...+..  .+.   +.....+.    +.++|+|||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la--~~~---~~~~~~~~----l~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ--RLG---CDCFMEPP----KSAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH--HHT---CEEESSCC----SSCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HCC---CeEecHHH----hccCCEEEEcccC
Confidence            789999995 99999999999999999999999765443322  221   23332222    2389999997653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.49  E-value=0.0015  Score=59.33  Aligned_cols=77  Identities=9%  Similarity=0.022  Sum_probs=49.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCC--ccccccccc---CCCceEEeeCccc---ccccCCCCE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG--RKENVMHHF---GNPNFELIRHDVV---EPLLLEVDQ  183 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~--~~~~~~~~~---~~~~~~~~~~D~~---~~~~~~~D~  183 (340)
                      +.++++++|+|+ |.+|+.++..|.+.|. +|+++.|+.+.  +.+.+.+.+   ....+.....+..   ...+.++|+
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceE
Confidence            467889999996 9999999999999998 89999997321  111111111   1112333333221   234567999


Q ss_pred             EEEcccC
Q 019470          184 IYHLACP  190 (340)
Q Consensus       184 Vih~Ag~  190 (340)
                      |||+...
T Consensus       224 IINaTp~  230 (312)
T 3t4e_A          224 LTNGTKV  230 (312)
T ss_dssp             EEECSST
T ss_pred             EEECCcC
Confidence            9997654

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.44  E-value=0.0055  Score=56.82  Aligned_cols=93  Identities=18%  Similarity=0.157  Sum_probs=52.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHh-CCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIA-RGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~-~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      |++|.|.||+|++|+.|++.|++ +++   +++.+.....+.  ... .+....+.+.+.+.. ..+.++|+||.+.|. 
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~-~~~g~~i~~~~~~~~-~~~~~~DvVf~a~g~-   75 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAP-SFGGTTGTLQDAFDL-EALKALDIIVTCQGG-   75 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCC-GGGTCCCBCEETTCH-HHHHTCSEEEECSCH-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--Ccc-ccCCCceEEEecCCh-HHhcCCCEEEECCCc-
Confidence            46899999999999999995444 443   555554432111  111 111122333333211 124689999988752 


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe--EEEEeC
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTST  230 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~--~i~~SS  230 (340)
                                       ..+......+.+.|++  +|=.||
T Consensus        76 -----------------~~s~~~a~~~~~~G~k~vVID~ss   99 (367)
T 1t4b_A           76 -----------------DYTNEIYPKLRESGWQGYWIDAAS   99 (367)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             -----------------hhHHHHHHHHHHCCCCEEEEcCCh
Confidence                             2244566677788874  444444

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.42  E-value=0.019  Score=52.86  Aligned_cols=102  Identities=18%  Similarity=0.184  Sum_probs=63.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEe
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELI  169 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~  169 (340)
                      .++..+|+|.|+ |.+|.++++.|+..|. +++++|+..-....                      .+........++.+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            345679999995 8899999999999997 88888875311100                      00000011244455


Q ss_pred             eCcccccc----cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCc
Q 019470          170 RHDVVEPL----LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (340)
Q Consensus       170 ~~D~~~~~----~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~  231 (340)
                      ..++.+..    +.++|+||.+..         +...       .-..+.++|.+.++.+|+.+..
T Consensus       194 ~~~i~~~~~~~~~~~~DlVvd~~D---------n~~~-------~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          194 ALNINDYTDLHKVPEADIWVVSAD---------HPFN-------LINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             ECCCCSGGGGGGSCCCSEEEECCC---------CSTT-------HHHHHHHHHHHTTCCEEEEEEE
T ss_pred             ecccCchhhhhHhccCCEEEEecC---------ChHH-------HHHHHHHHHHHhCCCEEEEEEe
Confidence            44443222    678999998652         1110       2234567899999888876643

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.41  E-value=0.003  Score=58.71  Aligned_cols=73  Identities=23%  Similarity=0.272  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCccccc--ccCCCCEEEEccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEP--LLLEVDQIYHLAC  189 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~--~~~~~D~Vih~Ag  189 (340)
                      .++.+|+|+||+|.||...++.+...|.+|+++++ . .+.+.. ..+.... ++..+.|..+.  ...++|+||+++|
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~-~~~~~~-~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g  257 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-Q-DASELV-RKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG  257 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-G-GGHHHH-HHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-h-HHHHHH-HHcCCCEEEECCchHHHHHHhhcCCCCEEEECCC
Confidence            35779999999999999999999889999998874 2 222222 2222211 12212222221  1247999999987

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.40  E-value=0.0026  Score=60.10  Aligned_cols=67  Identities=15%  Similarity=0.218  Sum_probs=49.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      +++|+|+|. |-+|..+++.|.++|++|+++++++..... .    ....+.++.+|.+++.      +.++|+||-+.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~-~----~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIET-L----RKFGMKVFYGDATRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHH-H----HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-H----HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence            357999995 999999999999999999999986433221 1    1235667778877652      45789999765

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.37  E-value=0.0051  Score=55.40  Aligned_cols=71  Identities=15%  Similarity=0.156  Sum_probs=50.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ...+++|+|.| .|.||+.+++.|...|.+|++.+|+..... ....    ..++.+..+..++.+.++|+|+.+..
T Consensus       154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~-~~~~----~g~~~~~~~~l~~~l~~aDvVi~~~p  224 (300)
T 2rir_A          154 TIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLA-RITE----MGLVPFHTDELKEHVKDIDICINTIP  224 (300)
T ss_dssp             CSTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHH----TTCEEEEGGGHHHHSTTCSEEEECCS
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH----CCCeEEchhhHHHHhhCCCEEEECCC
Confidence            56788999999 599999999999999999999998643211 1111    12333333334556778999998765

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.34  E-value=0.0032  Score=56.89  Aligned_cols=37  Identities=30%  Similarity=0.491  Sum_probs=32.1

Q ss_pred             CCCCe-EEEE-cCc-----------------hHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLR-IVVT-GGA-----------------GFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~-vlVt-Gat-----------------G~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..|++ |||| |+|                 |-.|.++++.++++|++|+.+.+..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            45667 9999 777                 9999999999999999999998853

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.33  E-value=0.0039  Score=55.69  Aligned_cols=69  Identities=20%  Similarity=0.167  Sum_probs=47.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++++++|+|+ |..|+.++..|.+.|. +|+++.|+.+... .+..     .+.....+..+. + ++|+|||+...
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~-~La~-----~~~~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTS-EIYG-----EFKVISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHH-HHCT-----TSEEEEHHHHTT-C-CCSEEEECSST
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHH-----hcCcccHHHHHh-c-cCCEEEECCcc
Confidence            457889999996 8899999999999998 8999998654322 2211     122233222233 4 89999997643

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=96.33  E-value=0.0095  Score=56.59  Aligned_cols=34  Identities=44%  Similarity=0.564  Sum_probs=30.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      |+|.|.| +|++|..++..|++.|++|+++++++.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~   34 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSST   34 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            4799998 799999999999999999999998643

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.32  E-value=0.0017  Score=59.05  Aligned_cols=73  Identities=19%  Similarity=0.304  Sum_probs=48.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccccCCCCEEEEccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..+.+|+|+||+|.+|...++.+...|.+|+++++..  .. .....+... -++..+.|...+.+.++|+||.+.|
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~--~~-~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR--NH-AFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH--HH-HHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc--hH-HHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCC
Confidence            4577999999999999999999999999999887532  11 222222222 1222222313344568999999887

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.28  E-value=0.012  Score=56.21  Aligned_cols=76  Identities=14%  Similarity=0.030  Sum_probs=53.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCC-CCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE-VDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~-~D~Vih~Ag~  190 (340)
                      ..++++|+|.|. |..|..+++.|.++|++|.+.|+....... ....+...++.+..+...+..+.+ +|.||...|+
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~-~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi   82 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENP-TAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGI   82 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCH-HHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCCh-HHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence            456789999997 889999999999999999999986432111 111222235566655444444455 8999988775

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.27  E-value=0.015  Score=53.31  Aligned_cols=67  Identities=31%  Similarity=0.318  Sum_probs=49.7

Q ss_pred             CCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       109 p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +......+|+|.|.| .|-||+.+++.|...|.+|++.+|.....          ...  ...+..++.+.++|+|+.+.
T Consensus       164 ~~~~~l~gktiGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------~~~--~~~~sl~ell~~aDvVil~v  230 (340)
T 4dgs_A          164 PLGHSPKGKRIGVLG-LGQIGRALASRAEAFGMSVRYWNRSTLSG----------VDW--IAHQSPVDLARDSDVLAVCV  230 (340)
T ss_dssp             CCCCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCTT----------SCC--EECSSHHHHHHTCSEEEECC
T ss_pred             CccccccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCcccc----------cCc--eecCCHHHHHhcCCEEEEeC
Confidence            334578899999999 69999999999999999999999864321          011  12233455677899999765

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.26  E-value=0.0064  Score=54.20  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=31.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      .++|.|.| +|.+|..|+..|++.|++|++.+++++.
T Consensus         4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~   39 (283)
T 4e12_A            4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDA   39 (283)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHH
Confidence            46899998 5999999999999999999999987543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.25  E-value=0.0029  Score=59.60  Aligned_cols=72  Identities=19%  Similarity=0.327  Sum_probs=49.4

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..+++|+|.|+ |.+|..+++.|...|. +|++++|+..... .+...+   +.+.+..+...+.+.++|+||.+.+.
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~-~la~~~---g~~~~~~~~l~~~l~~aDvVi~at~~  237 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDL---GGEAVRFDELVDHLARSDVVVSATAA  237 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHH---TCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH-HHHHHc---CCceecHHhHHHHhcCCCEEEEccCC
Confidence            46789999997 9999999999999998 9999998643221 111111   12333323333455789999998763

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.25  E-value=0.0035  Score=57.99  Aligned_cols=70  Identities=13%  Similarity=0.110  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC---CCcccccccccCCCceEEeeC-cccccc---cCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF---TGRKENVMHHFGNPNFELIRH-DVVEPL---LLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~---~~~~~~~~~~~~~~~~~~~~~-D~~~~~---~~~~D~Vih~  187 (340)
                      ++++|+|+|+ |.||..+++.+...|.+|++++++.   ... +.. ..+.   .+.++. |..+..   -.++|+||++
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~-~~~g---a~~v~~~~~~~~~~~~~~~~d~vid~  253 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVI-EETK---TNYYNSSNGYDKLKDSVGKFDVIIDA  253 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHH-HHHT---CEEEECTTCSHHHHHHHCCEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHH-HHhC---CceechHHHHHHHHHhCCCCCEEEEC
Confidence            4789999999 9999999999988999999999865   221 111 1222   222211 222111   1469999999


Q ss_pred             ccC
Q 019470          188 ACP  190 (340)
Q Consensus       188 Ag~  190 (340)
                      +|.
T Consensus       254 ~g~  256 (366)
T 2cdc_A          254 TGA  256 (366)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            973

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.23  E-value=0.03  Score=53.71  Aligned_cols=36  Identities=19%  Similarity=0.087  Sum_probs=32.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CC-eEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~-~V~~l~r~~~  151 (340)
                      +.|+|.|.| .|++|..++..|++. |+ +|+++++++.
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            456899998 799999999999999 99 9999999866

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.21  E-value=0.0073  Score=54.28  Aligned_cols=35  Identities=29%  Similarity=0.371  Sum_probs=32.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +++|.|.||.|.+|..+++.|.+.|++|++++|+.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            46899999999999999999999999999998854

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.21  E-value=0.01  Score=50.35  Aligned_cols=37  Identities=19%  Similarity=0.248  Sum_probs=30.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ...+++|.|.| .|.+|..+++.|.+.|++|++++|++
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~   52 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKD   52 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            34567999999 79999999999999999999998853

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=96.13  E-value=0.008  Score=53.34  Aligned_cols=42  Identities=26%  Similarity=0.381  Sum_probs=36.0

Q ss_pred             CCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          108 IPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       108 ~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +|...+.++|+|||.| .|-+|...++.|++.|++|++++...
T Consensus         5 lpl~~~l~~k~VLVVG-gG~va~rka~~Ll~~Ga~VtViap~~   46 (274)
T 1kyq_A            5 LQLAHQLKDKRILLIG-GGEVGLTRLYKLMPTGCKLTLVSPDL   46 (274)
T ss_dssp             EEEEECCTTCEEEEEE-ESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred             eeEEEEcCCCEEEEEC-CcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence            4555677899999999 58899999999999999999998643

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.11  E-value=0.0034  Score=57.68  Aligned_cols=36  Identities=31%  Similarity=0.299  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++.+|||+||+|.+|...++.+...|.+|+++++++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~  185 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRN  185 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            578999999999999999999999999999998854

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.10  E-value=0.006  Score=53.60  Aligned_cols=68  Identities=16%  Similarity=0.289  Sum_probs=46.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      .++ +++|.|+ |..|+.++..|++.|. +|++.+|+.+... .+..     .+.....+...+.+.++|+||++..
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~-~la~-----~~~~~~~~~~~~~~~~aDiVInatp  175 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAK-ALDF-----PVKIFSLDQLDEVVKKAKSLFNTTS  175 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHH-TCCS-----SCEEEEGGGHHHHHHTCSEEEECSS
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-HHHH-----HcccCCHHHHHhhhcCCCEEEECCC
Confidence            456 8999995 9999999999999998 8999999643322 1111     1122233333445678999999764

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.09  E-value=0.0094  Score=53.41  Aligned_cols=101  Identities=17%  Similarity=0.231  Sum_probs=63.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCc----------------c-----cccccccCCCceEEee
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGR----------------K-----ENVMHHFGNPNFELIR  170 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~----------------~-----~~~~~~~~~~~~~~~~  170 (340)
                      +++..+|+|.| .|.+|.++++.|++.|. +++++|...-..                +     +.+...-....++.+.
T Consensus        33 kL~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            45677999999 69999999999999997 888887653110                0     0000000112444444


Q ss_pred             Ccccc-----ccc-----------CCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCc
Q 019470          171 HDVVE-----PLL-----------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (340)
Q Consensus       171 ~D~~~-----~~~-----------~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~  231 (340)
                      .++.+     ..+           .++|+||.+.                 -|...-..+.++|.+.++.+|+.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~-----------------Dn~~~R~~in~~c~~~~~Pli~~gv~  171 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV-----------------DNFEARMTINTACNELGQTWMESGVS  171 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC-----------------SSHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECC-----------------cchhhhhHHHHHHHHhCCCEEEeeee
Confidence            44432     111           4789999765                 23444456778899999888876543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.09  E-value=0.0029  Score=58.12  Aligned_cols=71  Identities=14%  Similarity=0.046  Sum_probs=46.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc---c--CCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL---L--LEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~---~--~~~D~Vih~Ag  189 (340)
                      ++|+|+||+|.||...++.+...|.+|++++++..... ... .+... -++..+.|..+..   .  .++|+||+++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~-~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LLK-DIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HHH-HHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-HcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            68999999999999999988889999999998654322 111 22211 1122122222211   1  37999999987

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.08  E-value=0.0047  Score=56.99  Aligned_cols=73  Identities=22%  Similarity=0.212  Sum_probs=48.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeC-cccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRH-DVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~-D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++..... .. .+.... ++..+. |..+....++|+||.++|.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~-~~-~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED-AM-KMGADHYIATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-HH-HHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HH-HcCCCEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence            5779999999 999999999888889999999986544321 11 122211 222222 3322222579999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.06  E-value=0.032  Score=48.76  Aligned_cols=104  Identities=10%  Similarity=0.119  Sum_probs=62.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc------------------ccccccc----CCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK------------------ENVMHHF----GNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~------------------~~~~~~~----~~~~~~~~~  170 (340)
                      ++.++|+|.|+ |.+|.++++.|+..|. +++++|...-...                  +...+.+    ....++.+.
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  104 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ  104 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence            45669999996 7799999999999997 7778766421100                  0000000    112334443


Q ss_pred             Ccccc----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          171 HDVVE----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       171 ~D~~~----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      .++..    ..+.++|+||.+..                 |...-..+.++|.+.++.+|..+..+.+|
T Consensus       105 ~~~~~~~~~~~~~~~DvVi~~~d-----------------~~~~r~~l~~~~~~~~~p~i~~~~~g~~G  156 (251)
T 1zud_1          105 QRLTGEALKDAVARADVVLDCTD-----------------NMATRQEINAACVALNTPLITASAVGFGG  156 (251)
T ss_dssp             SCCCHHHHHHHHHHCSEEEECCS-----------------SHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred             ccCCHHHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence            33322    23456899998652                 22233456778888888888877654333

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.06  E-value=0.0085  Score=53.71  Aligned_cols=71  Identities=20%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ...+++|+|.| .|.||+.+++.|...|.+|++.+|...... ... .   ..++.+..+..++.+.++|+|+.+..
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~-~~~-~---~g~~~~~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLA-RIA-E---MGMEPFHISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH-H---TTSEEEEGGGHHHHTTTCSEEEECCS
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHH-H---CCCeecChhhHHHHhcCCCEEEECCC
Confidence            56788999999 699999999999999999999998643211 111 1   12333333334556778999998763

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=96.04  E-value=0.014  Score=51.79  Aligned_cols=68  Identities=18%  Similarity=0.087  Sum_probs=44.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc---eEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN---FELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|.|+ |.+|..++..|.+.|++|++++|++..... +........   ..+.. +. .+.+.++|+||-+.
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~~~~~-~~-~~~~~~~d~vi~~v   71 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS-VNLVETDGSIFNESLTA-ND-PDFLATSDLLLVTL   71 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE-EEEECTTSCEEEEEEEE-SC-HHHHHTCSEEEECS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceee-EEEEcCCCceeeeeeee-cC-ccccCCCCEEEEEe
Confidence            47999996 999999999999999999999997643322 211110011   11111 21 23456799999865

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.04  E-value=0.0094  Score=52.92  Aligned_cols=71  Identities=18%  Similarity=0.221  Sum_probs=48.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++++++|.| +|.+|+.+++.|++.|.+|++.+|+.+... .+...   ..++... + ..+.+.++|+||++...
T Consensus       126 ~~~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~-~l~~~---~g~~~~~-~-~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          126 EVKEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAI-KLAQK---FPLEVVN-S-PEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             TGGGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHH-HHTTT---SCEEECS-C-GGGTGGGCSEEEECSST
T ss_pred             CcCCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHH-HHHHH---cCCeeeh-h-HHhhhcCCCEEEEeCCC
Confidence            45678999999 589999999999999999999988643222 12111   1233322 2 23456689999998764

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.03  E-value=0.014  Score=50.94  Aligned_cols=34  Identities=15%  Similarity=0.373  Sum_probs=27.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEE-EeCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNF  149 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-l~r~  149 (340)
                      +|+||.|+|+ |.+|+.+++.+.++++++.+ +++.
T Consensus         2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~   36 (243)
T 3qy9_A            2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENT   36 (243)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecC
Confidence            4689999999 99999999999998777665 4553

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.01  E-value=0.013  Score=55.91  Aligned_cols=34  Identities=29%  Similarity=0.381  Sum_probs=31.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      |+|.|.| +|++|..++..|++.|++|+++++++.
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~   36 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRN   36 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence            5899998 699999999999999999999999754

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.01  E-value=0.026  Score=51.07  Aligned_cols=70  Identities=13%  Similarity=0.113  Sum_probs=46.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCccccc-ccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-LLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~D~Vih~A  188 (340)
                      .+..++|.|.| .|.+|..+++.|.+.|+  +|++.+|++.......  ..  ...+-...| .++ .+.++|+||-+.
T Consensus        30 ~~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~--~~--G~~~~~~~~-~~~~~~~~aDvVilav  102 (314)
T 3ggo_A           30 SLSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV--DL--GIIDEGTTS-IAKVEDFSPDFVMLSS  102 (314)
T ss_dssp             CCSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH--HT--TSCSEEESC-TTGGGGGCCSEEEECS
T ss_pred             hcCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH--HC--CCcchhcCC-HHHHhhccCCEEEEeC
Confidence            34457999999 79999999999999999  9999998653322111  11  111111122 233 567899999865

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.98  E-value=0.021  Score=52.01  Aligned_cols=68  Identities=19%  Similarity=0.214  Sum_probs=49.9

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      .....+++|.|.| .|.||+.+++.|...|.+|++.+|+...... .        ......+..++.+.++|+|+.+.
T Consensus       132 ~~~l~gktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~--------~~~~~~~~l~ell~~aDvV~l~l  199 (324)
T 3evt_A          132 TSTLTGQQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADH-F--------HETVAFTATADALATANFIVNAL  199 (324)
T ss_dssp             CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-C--------SEEEEGGGCHHHHHHCSEEEECC
T ss_pred             CccccCCeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHh-H--------hhccccCCHHHHHhhCCEEEEcC
Confidence            3467899999999 7999999999999999999999986533211 1        01123334456677899999765

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.97  E-value=0.007  Score=54.73  Aligned_cols=39  Identities=18%  Similarity=0.279  Sum_probs=34.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      ..++|+|.|.| .|.+|..+++.|++.|++|++.+|++..
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~   56 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSK   56 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGG
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence            44668999998 7999999999999999999999997543

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.95  E-value=0.062  Score=42.36  Aligned_cols=85  Identities=19%  Similarity=0.239  Sum_probs=53.1

Q ss_pred             CCCeEEEEcCc---hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGA---GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      +.++|.|.|++   |.+|..+++.|++.|++|+.++...    +..      .++..+  +..++...++|+++-+..  
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~----~~i------~G~~~~--~s~~el~~~vDlvii~vp--   78 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY----DEI------EGLKCY--RSVRELPKDVDVIVFVVP--   78 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC----SEE------TTEECB--SSGGGSCTTCCEEEECSC--
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC----CeE------CCeeec--CCHHHhCCCCCEEEEEeC--
Confidence            45589999987   8999999999999999988876532    111      122211  112233346899887542  


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                                      -.....+++.|.+.|++.+++.
T Consensus        79 ----------------~~~v~~v~~~~~~~g~~~i~~~  100 (138)
T 1y81_A           79 ----------------PKVGLQVAKEAVEAGFKKLWFQ  100 (138)
T ss_dssp             ----------------HHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ----------------HHHHHHHHHHHHHcCCCEEEEc
Confidence                            1234455666777787544443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.94  E-value=0.012  Score=53.25  Aligned_cols=81  Identities=17%  Similarity=0.147  Sum_probs=52.7

Q ss_pred             CCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEE--ee-C--cccccccCCCCEE
Q 019470          110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFEL--IR-H--DVVEPLLLEVDQI  184 (340)
Q Consensus       110 ~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~--~~-~--D~~~~~~~~~D~V  184 (340)
                      .+.+..+++++|.|++.-+|+.+++.|++.|.+|++++|+.....+... .+.......  +. .  +-..+.+.++|+|
T Consensus       171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~-~la~~~~~~t~~~~t~~~~L~e~l~~ADIV  249 (320)
T 1edz_A          171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE-SLKLNKHHVEDLGEYSEDLLKKCSLDSDVV  249 (320)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC-CSSCCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH-HHhhhcccccccccccHhHHHHHhccCCEE
Confidence            3446789999999988889999999999999999999885322111111 111111111  11 1  2334556789999


Q ss_pred             EEcccCC
Q 019470          185 YHLACPA  191 (340)
Q Consensus       185 ih~Ag~~  191 (340)
                      |...|..
T Consensus       250 IsAtg~p  256 (320)
T 1edz_A          250 ITGVPSE  256 (320)
T ss_dssp             EECCCCT
T ss_pred             EECCCCC
Confidence            9988753

>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}

Probab=95.93  E-value=0.032  Score=58.32  Aligned_cols=105  Identities=11%  Similarity=0.141  Sum_probs=69.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEee
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIR  170 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~~  170 (340)
                      ++..+|+|.|+ |.+|.++++.|+..|. +++++|...-...                      +.+...-....++.+.
T Consensus        25 L~~s~VlIvG~-GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~L~~lNP~v~v~~~~  103 (1015)
T 3cmm_A           25 MQTSNVLILGL-KGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVLD  103 (1015)
T ss_dssp             HTTCEEEEECC-SHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHTTSCTTSCEEECC
T ss_pred             HhcCEEEEECC-ChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHHHHHHCCCCeEEEec
Confidence            45669999995 8899999999999998 7888876421100                      0000010112455555


Q ss_pred             CcccccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          171 HDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       171 ~D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      .++....+.++|+||.+..                .|...-..+.++|.+.++.+|..++.+.+|
T Consensus       104 ~~l~~~~l~~~DvVv~~~d----------------~~~~~r~~ln~~c~~~~iplI~~~~~G~~G  152 (1015)
T 3cmm_A          104 SLDDVTQLSQFQVVVATDT----------------VSLEDKVKINEFCHSSGIRFISSETRGLFG  152 (1015)
T ss_dssp             CCCCSTTGGGCSEEEECTT----------------SCHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred             CCCCHHHHhcCCEEEEcCC----------------CCHHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            5555556678999997531                144555677889999998888888665544

>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*

Probab=95.91  E-value=0.014  Score=56.69  Aligned_cols=103  Identities=10%  Similarity=0.131  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------------------cccccccCCCceEEeeC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------------------ENVMHHFGNPNFELIRH  171 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------------------~~~~~~~~~~~~~~~~~  171 (340)
                      +..+|+|.|+ |.+|.++++.|+..|. +++++|...-...                      +.+...-....++.+..
T Consensus        31 ~~~~VlvvG~-GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lNp~v~v~~~~~  109 (531)
T 1tt5_A           31 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  109 (531)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhCCCCeEEEeCC
Confidence            4458999995 8899999999999998 7888875421100                      00000001123344444


Q ss_pred             ccc------ccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          172 DVV------EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       172 D~~------~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ++.      ...+.++|+||.+.                 .|...-..+.++|.+.++.+|..++.+.+|
T Consensus       110 ~~~~~~~~~~~~~~~~DvVi~~~-----------------d~~~~r~~ln~~c~~~~iplI~~~~~G~~G  162 (531)
T 1tt5_A          110 SPENLLDNDPSFFCRFTVVVATQ-----------------LPESTSLRLADVLWNSQIPLLICRTYGLVG  162 (531)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEES-----------------CCHHHHHHHHHHHHHTTCCEEEEEEETTEE
T ss_pred             CcchhhhhhHHHhcCCCEEEEeC-----------------CCHHHHHHHHHHHHHcCCCEEEEEecCCeE
Confidence            332      23456799999764                 233344567788999998899888766554

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=95.91  E-value=0.01  Score=56.83  Aligned_cols=37  Identities=30%  Similarity=0.178  Sum_probs=33.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      .+.+++++|||+. .||..+++.|.+.|.+|++.++++
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~  298 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDP  298 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4688999999975 999999999999999999998864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=95.88  E-value=0.0032  Score=57.83  Aligned_cols=72  Identities=21%  Similarity=0.308  Sum_probs=45.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----cCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~D~Vih~A  188 (340)
                      ..+.+|||+||+|.||...++.+...|.+|+++ ++... .+.. ..+....++ ...|..+..     -.++|+||+++
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~-~~~~-~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~  224 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD-LEYV-RDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTL  224 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH-HHHH-HHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH-HHHH-HHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECC
Confidence            356799999999999999999999999999998 43222 1212 222221122 112221111     13699999998


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       225 g  225 (343)
T 3gaz_A          225 G  225 (343)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=95.88  E-value=0.0058  Score=56.37  Aligned_cols=74  Identities=23%  Similarity=0.189  Sum_probs=46.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.+|+|+|+ |.+|...++.+...|.+|+++++++..... ....+.... ++..+.|...+...++|+||+++|.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~-~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREE-ALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHH-HHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC
Confidence            6779999995 999999998888889999999986543221 111222111 1111111222223479999999873

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.85  E-value=0.015  Score=55.48  Aligned_cols=91  Identities=22%  Similarity=0.315  Sum_probs=57.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC-C---eEEEEeCCCCCcccccccccCCCceEEeeCcc------cccccCCCCEEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG-D---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV------VEPLLLEVDQIYH  186 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G-~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~------~~~~~~~~D~Vih  186 (340)
                      ++|+|.| .|.||+.++..|++++ .   +|++++......  .+.+... .++...+.|-      .++.+.+.|+|||
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~--~~~~~~g-~~~~~~~Vdadnv~~~l~aLl~~~DvVIN   89 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV--DVAQQYG-VSFKLQQITPQNYLEVIGSTLEENDFLID   89 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC--CHHHHHT-CEEEECCCCTTTHHHHTGGGCCTTCEEEE
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh--hHHhhcC-CceeEEeccchhHHHHHHHHhcCCCEEEE
Confidence            3799999 8999999999999974 4   688887644332  2111111 2233223221      2334555699998


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                      ++-..                  ....++++|.++|+.+|-++
T Consensus        90 ~s~~~------------------~~l~Im~acleaGv~YlDTa  114 (480)
T 2ph5_A           90 VSIGI------------------SSLALIILCNQKGALYINAA  114 (480)
T ss_dssp             CCSSS------------------CHHHHHHHHHHHTCEEEESS
T ss_pred             CCccc------------------cCHHHHHHHHHcCCCEEECC
Confidence            55221                  13468999999998776555

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.85  E-value=0.016  Score=51.50  Aligned_cols=58  Identities=21%  Similarity=0.218  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.++++++|.|+++.+|+.++..|+++|..|+++.+...                     ...+.+.++|+||...|.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~~~~~~ADIVI~Avg~  213 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DLSLYTRQADLIIVAAGC  213 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHHTTCSEEEECSSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHhhcCCEEEECCCC
Confidence            3678999999999999999999999999999999876321                     122345678888887764

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.84  E-value=0.0055  Score=55.04  Aligned_cols=35  Identities=29%  Similarity=0.523  Sum_probs=30.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +|+|.|.|+ |.+|..++..|.+.|++|++++|+++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~   37 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPA   37 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence            468999995 99999999999999999999998643

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=95.83  E-value=0.027  Score=53.78  Aligned_cols=76  Identities=16%  Similarity=0.115  Sum_probs=56.6

Q ss_pred             CCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       109 p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |.-.+.++++|+|.| .|-+|...++.|++.|++|++++.....   .+.......++.++..+.....+.++|.||-+.
T Consensus         5 P~~~~l~~~~vlVvG-gG~va~~k~~~L~~~ga~V~vi~~~~~~---~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at   80 (457)
T 1pjq_A            5 PIFCQLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIP---QFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT   80 (457)
T ss_dssp             EEEECCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCH---HHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred             eeEEECCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEcCCCCH---HHHHHHhcCCEEEEECCCCccccCCccEEEEcC
Confidence            344567889999999 5889999999999999999999864322   222222334678888777777788999998644

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=95.81  E-value=0.0058  Score=52.32  Aligned_cols=68  Identities=21%  Similarity=0.191  Sum_probs=44.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEE-EeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +++|+|.|.| +|.+|..+++.|.+.|++|++ .+|+++.... +.....   +.... +. .+.+.++|+||-+.
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~-l~~~~g---~~~~~-~~-~~~~~~aDvVilav   89 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSS-VTDRFG---ASVKA-VE-LKDALQADVVILAV   89 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHH-HHHHHT---TTEEE-CC-HHHHTTSSEEEEES
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHH-HHHHhC---CCccc-Ch-HHHHhcCCEEEEeC
Confidence            3467999999 899999999999999999998 7775443222 111111   11111 11 22356799999765

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=95.77  E-value=0.11  Score=46.52  Aligned_cols=64  Identities=11%  Similarity=0.148  Sum_probs=42.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      +||-+.| .|.+|..+++.|++.||+|++.+|+++......     .....  ..+...+...++|+||-+.
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-----~~G~~--~~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLT-----KLGAT--VVENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTT-----TTTCE--ECSSGGGGCCTTCEEEECC
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----HcCCe--EeCCHHHHHhcCCceeeec
Confidence            4799998 899999999999999999999998755433221     12222  2344455667899999765

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.75  E-value=0.0032  Score=57.85  Aligned_cols=35  Identities=29%  Similarity=0.339  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~  202 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD  202 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence            6779999999 9999999999999999 999999864

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.74  E-value=0.0074  Score=53.82  Aligned_cols=64  Identities=17%  Similarity=0.195  Sum_probs=43.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|.| .|.+|..+++.|++.|++|++.+|+++........     ++.  ..+..++.+.++|+||-+.
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~--~~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-----GAE--RAATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-----TCE--ECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-----CCe--ecCCHHHHHhcCCEEEEEc
Confidence            5899999 69999999999999999999999875443221111     111  1222233445678888654

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.74  E-value=0.058  Score=49.00  Aligned_cols=72  Identities=13%  Similarity=-0.054  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCchHHHHH-HHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc-CCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSH-LVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-LEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~-l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~D~Vih~Ag~  190 (340)
                      .+|+|.|.| -|..|.. +++.|+++|++|.+.|+.......   ..+....+++..+...+... .++|.||...|+
T Consensus         3 ~~~~i~~iG-iGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~---~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi   76 (326)
T 3eag_A            3 AMKHIHIIG-IGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMS---TQLEALGIDVYEGFDAAQLDEFKADVYVIGNVA   76 (326)
T ss_dssp             CCCEEEEES-CCSHHHHHHHHHHHHTTCEEEEEESSCCTTHH---HHHHHTTCEEEESCCGGGGGSCCCSEEEECTTC
T ss_pred             CCcEEEEEE-ECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHH---HHHHhCCCEEECCCCHHHcCCCCCCEEEECCCc
Confidence            467899999 5778885 999999999999999986532211   11222355665543333333 479999998775

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.70  E-value=0.0041  Score=56.93  Aligned_cols=73  Identities=19%  Similarity=0.119  Sum_probs=46.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCccccc---ccCCCCEEEEccc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEP---LLLEVDQIYHLAC  189 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~---~~~~~D~Vih~Ag  189 (340)
                      ..+++|||+|+ |.+|..+++.+...|.+|+++++++.... .. ..+.... ++..+.|..+.   ...++|+||+++|
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~-~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LA-KELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HH-HHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HH-HHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            35779999999 77999999999999999999998643222 11 1122111 11111122111   1147999999987

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.69  E-value=0.0051  Score=56.33  Aligned_cols=35  Identities=26%  Similarity=0.368  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~  199 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNP  199 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence            5679999999 9999999998888999 999999854

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=95.68  E-value=0.018  Score=52.72  Aligned_cols=70  Identities=26%  Similarity=0.219  Sum_probs=47.2

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..+.+|||+|+ |.+|...++.+...|.+|+++++++....  ....+....+-   .|. +....++|+||++.|.
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~--~~~~lGa~~v~---~~~-~~~~~~~D~vid~~g~  244 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ--DALSMGVKHFY---TDP-KQCKEELDFIISTIPT  244 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH--HHHHTTCSEEE---SSG-GGCCSCEEEEEECCCS
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH--HHHhcCCCeec---CCH-HHHhcCCCEEEECCCc
Confidence            35779999997 99999999988889999999998654432  22223322221   221 1112289999999873

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.67  E-value=0.018  Score=51.57  Aligned_cols=64  Identities=19%  Similarity=0.145  Sum_probs=44.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      .++|.|.| .|.+|..+++.|++.|++|++.+|++.........     ++.  ..+..++.+. +|+||-+.
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-----g~~--~~~~~~~~~~-aDvvi~~v   78 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-----GAT--LADSVADVAA-ADLIHITV   78 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-----TCE--ECSSHHHHTT-SSEEEECC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-----CCE--EcCCHHHHHh-CCEEEEEC
Confidence            35899998 79999999999999999999999976543322111     121  1222334455 89988765

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.65  E-value=0.016  Score=51.77  Aligned_cols=59  Identities=20%  Similarity=0.253  Sum_probs=46.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcc-cccccCCCCEEEEcccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-VEPLLLEVDQIYHLACP  190 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.++++++|.|+++.+|+.++..|+++|..|+++.+...                    |+ ..+.+.++|+||...|.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------------~l~l~~~~~~ADIVI~Avg~  220 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------------TEDMIDYLRTADIVIAAMGQ  220 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------------HHHHHHHHHTCSEEEECSCC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------------CchhhhhhccCCEEEECCCC
Confidence            3678999999999999999999999999999999876321                    11 01445678999988874

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=95.61  E-value=0.029  Score=51.04  Aligned_cols=68  Identities=19%  Similarity=0.217  Sum_probs=49.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ....+++|.|.| .|-||+.+++.|...|.+|++.+|....... .        ......+..++.+.++|+|+.+.-
T Consensus       136 ~~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~--------~~~~~~~~l~ell~~aDvV~l~lP  203 (324)
T 3hg7_A          136 QGLKGRTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERAG-F--------DQVYQLPALNKMLAQADVIVSVLP  203 (324)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCTT-C--------SEEECGGGHHHHHHTCSEEEECCC
T ss_pred             cccccceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhhh-h--------hcccccCCHHHHHhhCCEEEEeCC
Confidence            367889999999 7999999999999999999999986522110 0        012223344556778998887653

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.60  E-value=0.0072  Score=54.91  Aligned_cols=67  Identities=15%  Similarity=0.174  Sum_probs=45.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      .++|+|.|.| .|.+|..+++.|++.|++|++.+|+++...... .    ..+..  .+..++.+.++|+||-+.
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~-~----~g~~~--~~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLA-A----LGATI--HEQARAAARDADIVVSML   95 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-T----TTCEE--ESSHHHHHTTCSEEEECC
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-H----CCCEe--eCCHHHHHhcCCEEEEEC
Confidence            4567999998 699999999999999999999998644322111 1    12221  222334566789888765

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.56  E-value=0.015  Score=52.15  Aligned_cols=64  Identities=16%  Similarity=0.046  Sum_probs=48.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ...+++|.|.| .|.||+.+++.|...|.+|++.+|+......          ++  ..+..++.+.++|+|+.+.-
T Consensus       119 ~l~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----------~~--~~~~l~ell~~aDiV~l~~P  182 (290)
T 3gvx_A          119 LLYGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV----------DV--ISESPADLFRQSDFVLIAIP  182 (290)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC----------SE--ECSSHHHHHHHCSEEEECCC
T ss_pred             eeecchheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc----------cc--ccCChHHHhhccCeEEEEee
Confidence            56788999999 7999999999999999999999986533211          11  23334455677999997653

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=95.56  E-value=0.009  Score=55.39  Aligned_cols=73  Identities=19%  Similarity=0.188  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++..... .. .+.... ++..+.|..+....++|+||.++|.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~-a~-~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AK-ALGADEVVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HH-HHTCSEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-HcCCcEEeccccHHHHHHhhcCCCEEEECCCC
Confidence            5779999997 889999999888899999999986543221 11 122211 1211122222223579999999873

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.53  E-value=0.081  Score=48.91  Aligned_cols=92  Identities=17%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             CeEEEEcCchHHHHHHHH-HHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          117 LRIVVTGGAGFVGSHLVD-RLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~-~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      ++|.|.||||++|..|++ .|.++.+   ++..+.-+..+.  .+.. +......+.+.+. ...+.++|+||-+.+.  
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~--~~~~-~~~~~~~~~~~~~-~~~~~~~Dvvf~a~~~--   74 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV--PAPN-FGKDAGMLHDAFD-IESLKQLDAVITCQGG--   74 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCC-SSSCCCBCEETTC-HHHHTTCSEEEECSCH--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCc--CHHH-hCCCceEEEecCC-hhHhccCCEEEECCCh--
Confidence            489999999999999999 6666653   666554322221  1111 1111122222211 1235789999988752  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeC
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTST  230 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS  230 (340)
                                      ..+..+...+.+.|+  ++|=.|+
T Consensus        75 ----------------~~s~~~~~~~~~~G~k~~VID~ss   98 (370)
T 3pzr_A           75 ----------------SYTEKVYPALRQAGWKGYWIDAAS   98 (370)
T ss_dssp             ----------------HHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             ----------------HHHHHHHHHHHHCCCCEEEEeCCc
Confidence                            113345555566775  4555554

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.53  E-value=0.015  Score=53.21  Aligned_cols=35  Identities=34%  Similarity=0.472  Sum_probs=30.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      .+..+|+|.| .|.+|.++++.|+..|. +++++|+.
T Consensus        32 L~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           32 IKNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HhCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCC
Confidence            4567999999 59999999999999997 78888765

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=95.49  E-value=0.012  Score=53.42  Aligned_cols=70  Identities=21%  Similarity=0.162  Sum_probs=44.0

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCc--ccccc-cCCCCEEEEccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHD--VVEPL-LLEVDQIYHLAC  189 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D--~~~~~-~~~~D~Vih~Ag  189 (340)
                      +|+|+||+|.+|...++.+...|.+|+++++++.... ... .+... -++..+.|  ..... -.++|+||+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~-~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLR-VLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHH-HTTCSEEEECC---------CCSCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHH-HcCCcEEEecCCcHHHHHHHhcCCcccEEEECCc
Confidence            7999999999999999998889999999998754322 111 12211 11211111  11111 136899999987

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=95.48  E-value=0.008  Score=57.17  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..+++|||+||+|.||...++.+...|.+|++++++.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~  255 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA  255 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            3578999999999999999999999999999998753

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.47  E-value=0.01  Score=53.31  Aligned_cols=36  Identities=17%  Similarity=0.126  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++|+|.|.| .|.+|..+++.|++.|++|++.+|++.
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~   41 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQ   41 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence            346899998 799999999999999999999998654

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.46  E-value=0.081  Score=52.35  Aligned_cols=103  Identities=15%  Similarity=0.247  Sum_probs=65.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCccc----------------------ccccccCCCceEEeeC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKE----------------------NVMHHFGNPNFELIRH  171 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~----------------------~~~~~~~~~~~~~~~~  171 (340)
                      +..+|+|.|+ |.+|.++++.|+..|. +++++|...-....                      .+...-....++.+..
T Consensus        16 ~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~   94 (640)
T 1y8q_B           16 AGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHD   94 (640)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEES
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEec
Confidence            4458999995 9999999999999997 88888764211000                      0000001124445555


Q ss_pred             cccc-----cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCccccc
Q 019470          172 DVVE-----PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG  235 (340)
Q Consensus       172 D~~~-----~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g  235 (340)
                      ++.+     ..+.++|+||.+.                 -|+..-..+.+.|.+.++.+|..++.+.+|
T Consensus        95 ~i~~~~~~~~~~~~~DlVvda~-----------------Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G  146 (640)
T 1y8q_B           95 SIMNPDYNVEFFRQFILVMNAL-----------------DNRAARNHVNRMCLAADVPLIESGTAGYLG  146 (640)
T ss_dssp             CTTSTTSCHHHHTTCSEEEECC-----------------SCHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred             ccchhhhhHhhhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEEEecccc
Confidence            4432     3356789999864                 244455567788888888888776655443

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=95.44  E-value=0.012  Score=54.17  Aligned_cols=33  Identities=21%  Similarity=0.398  Sum_probs=28.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEe
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~  147 (340)
                      .+.+|.|.||||++|..|++.|.++.. ++..+.
T Consensus        12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~   45 (351)
T 1vkn_A           12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   45 (351)
T ss_dssp             CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEe
Confidence            456899999999999999999999865 666665

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.44  E-value=0.024  Score=51.40  Aligned_cols=66  Identities=17%  Similarity=0.274  Sum_probs=48.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceE-EeeCcccccccCCCCEEEEcc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFE-LIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ....+|+|.|.| .|-||+.+++.|...|.+|++.+|+.....          .++ ....+..++.+.++|+|+.+.
T Consensus       135 ~~l~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~----------~~~~~~~~~~l~ell~~aDiV~l~~  201 (315)
T 3pp8_A          135 YTREEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWP----------GVESYVGREELRAFLNQTRVLINLL  201 (315)
T ss_dssp             CCSTTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCT----------TCEEEESHHHHHHHHHTCSEEEECC
T ss_pred             CCcCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhh----------hhhhhcccCCHHHHHhhCCEEEEec
Confidence            457889999999 799999999999999999999998654221          111 111233455677899888765

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.44  E-value=0.006  Score=54.42  Aligned_cols=36  Identities=19%  Similarity=0.191  Sum_probs=32.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      |++|.|.| .|.+|..+++.|++.|++|++.+|++..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~   36 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAK   36 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGG
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHH
Confidence            46899998 7999999999999999999999997554

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.40  E-value=0.021  Score=51.62  Aligned_cols=63  Identities=24%  Similarity=0.266  Sum_probs=47.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ....+++|.|.| .|.||+.+++.|...|.+|++.+|......           +   ..+..++.+.++|+|+.+.-
T Consensus       140 ~~l~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----------~---~~~~l~ell~~aDvV~l~~p  202 (311)
T 2cuk_A          140 LDLQGLTLGLVG-MGRIGQAVAKRALAFGMRVVYHARTPKPLP-----------Y---PFLSLEELLKEADVVSLHTP  202 (311)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----------S---CBCCHHHHHHHCSEEEECCC
T ss_pred             cCCCCCEEEEEE-ECHHHHHHHHHHHHCCCEEEEECCCCcccc-----------c---ccCCHHHHHhhCCEEEEeCC
Confidence            367889999998 799999999999999999999998653321           1   11223345667899987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	340
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-90
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-62
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-57
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-55
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-48
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	7e-47
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	7e-46
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-45
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-42
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	6e-40
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-39
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-38
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	4e-34
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-33
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-30
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-21
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	5e-19
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	2e-17
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-15
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	5e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-14
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	2e-13
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	4e-12
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-12
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-11
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	4e-10
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-10
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-09
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	7e-07
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	5e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-05
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	4e-04
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.003

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  271 bits (694), Expect = 2e-90
 Identities = 158/218 (72%), Positives = 181/218 (83%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL 62

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR LL STSEVYGDP
Sbjct: 63  YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDP 122

Query: 238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID 297
             HPQ E YWG+VNPIG R+CYDEGKR AET+   Y +  GVEVR+ARIFNT+GPRM ++
Sbjct: 123 EVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 182

Query: 298 DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           DGRVVSNF+ QAL+ EPLTVYG G QTR+FQ+VSDLV 
Sbjct: 183 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 220

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  201 bits (512), Expect = 1e-62
 Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 26/242 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNF-FTGRKENVMHHFGNPNFELIRHDVVE 175
           +I++TGGAGF+GS +V  +I    D+V+ +D   + G  E++     +  +     D+ +
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----- 223
              +         D + HLA  +        P   I+TN+VGT  +L +A++  +     
Sbjct: 62  SAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121

Query: 224 -----RFLLTSTSEVYGDPLQHPQKET-----YWGNVNPIGVRSCYDEGKRTAETLTMDY 273
                RF   ST EVYGD     + E       +         S Y   K +++ L   +
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAW 181

Query: 274 HRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
            R  G+   +    N YGP       +++   +  AL  +PL +YG G Q R + +V D 
Sbjct: 182 RRTYGLPTIVTNCSNNYGPYH--FPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239

Query: 334 VR 335
            R
Sbjct: 240 AR 241

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  187 bits (475), Expect = 1e-57
 Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 20/231 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARG------DSVIVVDNF-FTGRKENVMHHFGNPNFELIR 170
           R++VTGGAGF+GSH V +L+A        D VIV+D+  + G + N+     +P    + 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61

Query: 171 HDVVEPLLLEV-----DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-AR 224
            D+ +  LL       D I H A  +             +TNV GT  +L  A   G  R
Sbjct: 62  GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121

Query: 225 FLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIA 284
            +  ST++VYG        E+     +P+   S Y   K  ++ +   YHR  G++VRI 
Sbjct: 122 VVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 285 RIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           R  N YGP       +++  FV   L    L +YGDG   R +    D  R
Sbjct: 177 RCCNNYGPYQ--HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  182 bits (463), Expect = 2e-55
 Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 24/235 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMH--HFGNPNFELIRH 171
             ++TG  G  GS+L + L+ +G  V  +      F T R +++    H  NP F L   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 172 DVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-- 222
           D+ +   L         D++Y+L   +       +P  T   + +GTL +L   + +G  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 223 --ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVE 280
              RF   STSE+YG   + PQKET      P   RS Y   K  A  +T++Y    G+ 
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMY 177

Query: 281 VRIARIFNTYGPRM--CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
                +FN   PR        ++       A   E     G+    R +    D 
Sbjct: 178 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY 232

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  163 bits (413), Expect = 2e-48
 Identities = 48/229 (20%), Positives = 74/229 (32%), Gaps = 25/229 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           R+ + G  G VGS +  +L  RGD  +V+                     L+    V   
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR--------------DELNLLDSRAVHDF 49

Query: 178 LLE--VDQIYHLACPASP-VHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEV 233
                +DQ+Y  A      V     P   I  N++   N++  A +    + L   +S +
Sbjct: 50  FASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI 109

Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
           Y    + P  E+             Y   K     L   Y+R  G + R     N YGP 
Sbjct: 110 YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 169

Query: 294 MCIDDGR-------VVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
                         +     A A +   + V+G G   R F  V D+  
Sbjct: 170 DNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA 218

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  160 bits (404), Expect = 7e-47
 Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 19/233 (8%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV------MHHFGNPN 165
           L  +    ++TG AGF+GS+L++ L+     V+ +DNF TG + N+      +      N
Sbjct: 12  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71

Query: 166 FELIRHDVVEPLLL-----EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR 220
           F+ I+ D+            VD + H A   S      +P+ +  TN+ G LNML  A+ 
Sbjct: 72  FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131

Query: 221 VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGV 279
                F   ++S  YGD    P+ E   G        S Y   K   E     + R  G 
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGK-----PLSPYAVTKYVNELYADVFSRCYGF 186

Query: 280 EVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV 330
                R FN +G R   +     V+  + +  ++ + + + GDG+ +R F ++
Sbjct: 187 STIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYI 239

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 7e-46
 Identities = 55/235 (23%), Positives = 90/235 (38%), Gaps = 25/235 (10%)

Query: 121 VTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVMHH---FGNPNFELIRHDV 173
           +TG  G  GS+L + L+ +G  V  +      F TGR E++  +       N +L   D+
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 174 VEPLL-------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG---- 222
            +          ++  +IY+L   +           T   + VGTL +L   K  G    
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVR 282
            +F   STSE+YG   + PQKET      P   RS Y   K  A  + +++     +   
Sbjct: 126 VKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAV 180

Query: 283 IARIFNTYGPRMCIDDG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
              +FN   PR   +    ++  +     L +      G+    R +    D V 
Sbjct: 181 NGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 235

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  155 bits (392), Expect = 4e-45
 Identities = 59/229 (25%), Positives = 93/229 (40%), Gaps = 16/229 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE 175
            I+VTGGAGF+GS+ V  +        V V+D       +  +        EL+  D+ +
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 63

Query: 176 PLLLE-----VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
             L++      D I H A  +   +   +P   I TN +GT  +L  A++   RF   ST
Sbjct: 64  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 123

Query: 231 SEVYGD-------PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRI 283
            EVYGD       P         +         S Y   K  ++ +   + R  GV+  I
Sbjct: 124 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATI 183

Query: 284 ARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD 332
           +   N YGP   I+  + +   +   L      +YG+GK  R +   +D
Sbjct: 184 SNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTND 230

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  148 bits (374), Expect = 1e-42
 Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 30/243 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVE 175
           R++VTGG+G++GSH   +L+  G  VI++DN    ++  +  +   G  +   +  D+  
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 176 PLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLL 227
             L+        +D + H A   +       P++    NV GTL ++   +      F+ 
Sbjct: 62  EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIF 121

Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMD-YHRGAGVEVRIARI 286
           +S++ VYGD  + P  E++         +S Y + K   E +  D         + + R 
Sbjct: 122 SSSATVYGDQPKIPYVESFPTGTP----QSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177

Query: 287 FNTYGPRMCIDDG-------RVVSNFVAQAL--RKEPLTVYG------DGKQTRSFQFVS 331
           FN  G     D G         +  ++AQ    R++ L ++G      DG   R +  V 
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237

Query: 332 DLV 334
           DL 
Sbjct: 238 DLA 240

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  141 bits (355), Expect = 6e-40
 Identities = 47/230 (20%), Positives = 84/230 (36%), Gaps = 17/230 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEP 176
             +VTG  G  G++L   L+ +G  V  +     +  +  +       + +    D+ + 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 177 LLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLL 227
             +       +  ++Y+LA  +        PV T   + +G  ++L   ++     RF  
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 228 TSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
            STSE++G      Q E       P   RS Y   K     +T++Y    G+      +F
Sbjct: 122 ASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILF 176

Query: 288 NTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           N   P   I+    +V        L K+     G+    R + F  D V 
Sbjct: 177 NHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE 226

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  140 bits (354), Expect = 1e-39
 Identities = 56/237 (23%), Positives = 96/237 (40%), Gaps = 22/237 (9%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEP 176
           ++VTGGAG++GSH V  LI  G   +V DN      ++V         +      D+ + 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLT 228
             LE       +D + H A   +       P++    N++GT+ +L L ++     F+ +
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFS 123

Query: 229 STSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARI 286
           S++ VYGD  + P          P+G  + Y   K   E +  D +       +  I R 
Sbjct: 124 SSATVYGDATRFPNMIPIPEE-CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 287 FNTYGPRMCIDDG--------RVVSNFVAQAL-RKEPLTVYGDGKQTRSFQFVSDLV 334
           FN  G       G         ++      A+ R+E L ++GD   +R    + D +
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYI 239

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  138 bits (347), Expect = 1e-38
 Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 27/244 (11%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF-TGRKENVMHHFGNPNFELIRHDVVEP 176
           ++++TGG GF+GS+L    +++G  +IV DN    G  +N+       NFE +  D+   
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 177 LLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLA--KRVGARFLL 227
             +         D  +HLA   +      NP    + NV GTLN+L            + 
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 228 TSTSEVYGDPLQHPQKETYWGNVN-----------PIGVRSCYDEGKRTAETLTMDYHRG 276
           +ST++VYGD  Q+   ET                  +   S Y   K  A+   +DY R 
Sbjct: 122 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 181

Query: 277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFV------AQALRKEPLTVYGDGKQTRSFQFV 330
            G+   + R  + YG R      +    +        +    +P T+ G+GKQ R     
Sbjct: 182 FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241

Query: 331 SDLV 334
            D++
Sbjct: 242 EDMI 245

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  126 bits (317), Expect = 4e-34
 Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 13/231 (5%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           + L+I +TG  GF+ SH+  RL   G  VI  D     + E++        F L+   V+
Sbjct: 14  ENLKISITGAGGFIASHIARRLKHEGHYVIASDWK---KNEHMTEDMFCDEFHLVDLRVM 70

Query: 175 EPLLLEVDQIYHLACPASP----VHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTS 229
           E  L   + + H+   A+        + N    +  N + + NM+  A+  G  RF   S
Sbjct: 71  ENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYAS 130

Query: 230 TSEVYG--DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIF 287
           ++ +Y     L+         +  P   +  +   K   E L   Y++  G+E RI R  
Sbjct: 131 SACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFH 190

Query: 288 NTYGPR---MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           N YGP        +    +         +   ++GDG QTRSF F+ + V 
Sbjct: 191 NIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE 241

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  123 bits (308), Expect = 4e-33
 Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 26/237 (10%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN----FFTGRKENVM---HHFGNPNFELIR 170
             ++TG  G  GS+L + L+ +G  V  +      F T R  ++    H+      +L  
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 171 HDVVEPLLLE-------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA 223
            D+ +   L         D++Y+LA  +        P  T      G L +L   +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 224 RF-----LLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAG 278
                     + S         PQ ET      P   RS Y   K  A   T++Y    G
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAYG 177

Query: 279 VEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 333
           +      +FN   PR   +    ++        +  +     G+ + +R + F  D 
Sbjct: 178 LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 234

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 3e-30
 Identities = 56/247 (22%), Positives = 93/247 (37%), Gaps = 34/247 (13%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV--------MHHFGNPNFELI 169
           +++VTGGAG++GSH V  L+  G   +V+DNF    +           +      + E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 170 RHDVVEPLLLEVDQ-------IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG 222
             D+++   L+          + H A   +       P+   + N+ GT+ +L + K  G
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123

Query: 223 ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDY-HRGAGVEV 281
            + L+ S+S        +PQ           G  + Y + K   E +  D          
Sbjct: 124 VKNLVFSSSATVY---GNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180

Query: 282 RIARIFNTYGPRMCIDDG-------RVVSNFVAQAL--RKEPLTVYG------DGKQTRS 326
            + R FN  G       G         +  +V+Q    R+E L V+G      DG   R 
Sbjct: 181 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240

Query: 327 FQFVSDL 333
           +  V DL
Sbjct: 241 YIHVVDL 247

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 91.0 bits (224), Expect = 3e-21
 Identities = 53/277 (19%), Positives = 90/277 (32%), Gaps = 59/277 (21%)

Query: 118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKEN------------------VM 158
           R++V GGAG++GSH V  L+     SV++VD+      ++                    
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 159 HHFGNPNFELIRHDVVEPLLLE--------VDQIYHLACPASPVHYKFNPVKTIKTNVVG 210
             + +    L   DV     L         +D + H+    +      +P+K    NVVG
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 211 TLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV---RSCYDEGKRTAE 267
            L +L          ++ S+S             T    ++        S Y E K  AE
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAE 183

Query: 268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDG-------RVVSNFVAQALRK-------- 312
            +  D     G++    R FN  G     D G        ++   + + +          
Sbjct: 184 RMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLT 243

Query: 313 --------EPLTVYG------DGKQTRSFQFVSDLVR 335
                   + + ++G      DG   R +  V DL  
Sbjct: 244 IHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLAS 280

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 84.6 bits (207), Expect = 5e-19
 Identities = 49/227 (21%), Positives = 89/227 (39%), Gaps = 19/227 (8%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV--- 173
           R+++ G  GF+G+HL +RL+      V  +D               +P+F  +  D+   
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIH 57

Query: 174 ---VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST 230
              +E  + + D +  L   A+P+ Y  NP++  + +    L ++    +   R +  ST
Sbjct: 58  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 117

Query: 231 SEVYGDPLQHPQKETYWGNVNPIGV--RSCYDEGKRTAETLTMDYHRGAGVEVRIARIFN 288
           SEVYG        E +   +       R  Y   K+  + +   Y    G++  + R FN
Sbjct: 118 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 177

Query: 289 TYG------PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 329
             G          I   R ++  +   +   P+ +   GKQ R F  
Sbjct: 178 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 224

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 79.9 bits (195), Expect = 2e-17
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 15/218 (6%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           +G R+ VTG  GF G  L   L   G +V                       +    D+ 
Sbjct: 7   QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 66

Query: 175 EPLLLEVDQ-------IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL----AKRVGA 223
           +   L           ++H+A           PV+T  TNV+GT+ +L            
Sbjct: 67  DQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAV 126

Query: 224 RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM---DYHRGAGVE 280
             + +       + +   ++    G  +P        E   ++   +      +   G  
Sbjct: 127 VNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTA 186

Query: 281 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY 318
           V   R  N  G      D R+V + +    + +P+ + 
Sbjct: 187 VATVRAGNVIGGGDWALD-RIVPDILRAFEQSQPVIIR 223

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 73.3 bits (178), Expect = 3e-15
 Identities = 43/246 (17%), Positives = 77/246 (31%), Gaps = 26/246 (10%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV 174
           +G  ++VTG  GFV SH+V++L+  G  V         +  N+   +           VV
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVV 68

Query: 175 EPLL------LEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFL 226
           E +L        +     +A  AS V +     + +   + GTLN L  A    +  RF+
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV 128

Query: 227 LTSTSEVYGDPLQHPQKETY---------------WGNVNPIGVRSCYDEGKRTAETL-- 269
           LTS++     P  + +                       +P      Y   K  AE    
Sbjct: 129 LTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAW 188

Query: 270 TMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQF 329
                      +       T G     +     ++    +L    ++        + +  
Sbjct: 189 KFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVS 248

Query: 330 VSDLVR 335
             D+  
Sbjct: 249 AVDIGL 254

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 70.0 bits (169), Expect = 5e-14
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 18/83 (21%)

Query: 116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM----------------- 158
           G R++V GG G+ G      L  +   V +VDN      ++ +                 
Sbjct: 1   GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 159 -HHFGNPNFELIRHDVVEPLLLE 180
                  + EL   D+ +   L 
Sbjct: 61  WKALTGKSIELYVGDICDFEFLA 83

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 68.6 bits (166), Expect = 9e-14
 Identities = 26/221 (11%), Positives = 63/221 (28%), Gaps = 27/221 (12%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---RKENVMHHFGNPNFELIRHDVV 174
           R+++ GG G++G  +V+  I+ G    V+          K  ++ +F     +LI   + 
Sbjct: 5   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 64

Query: 175 EPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY 234
           +   L           ++      +     +  +     +  + +    +  L S   + 
Sbjct: 65  DHQRLVDALKQVDVVISALAGGVLSHHILEQLKL-----VEAIKEAGNIKRFLPSEFGMD 119

Query: 235 GDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM 294
            D ++H  +                       +         A +           G   
Sbjct: 120 PDIMEHALQPGSI---------------TFIDKRKVRRAIEAASIPYTYVSSNMFAGYF- 163

Query: 295 CIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
               G +          ++ + +YGDG     +    D+  
Sbjct: 164 ---AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGT 201

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 68.1 bits (164), Expect = 2e-13
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 119 IVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           I+VTGGAGF+GS++V  L  +G + ++VVDN   G K   +    N    + + D +  +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 178 LLEVDQIYHLACP 190
           +   +     A  
Sbjct: 61  MAGEEFGDVEAIF 73

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (150), Expect = 4e-12
 Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I + G  G  G   + + +  G  V V+    +               ++++   V+  
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGD 236
           +   D +  L    + +               G  N++   K  G    +  +++ +  D
Sbjct: 65  VAGQDAVIVLLGTRNDLSPTTV-------MSEGARNIVAAMKAHGVDKVVACTSAFLLWD 117

Query: 237 PLQHPQKETYW 247
           P + P +    
Sbjct: 118 PTKVPPRLQAV 128

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 63.7 bits (153), Expect = 4e-12
 Identities = 25/222 (11%), Positives = 58/222 (26%), Gaps = 34/222 (15%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG----RKENVMHHFGNPNFELIRHDV 173
           RI++ G  G++G H+    +  G    ++    T      K  ++  F      ++    
Sbjct: 5   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGS- 63

Query: 174 VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEV 233
                  +D    L      V    + V +++      +           RF  +     
Sbjct: 64  -------IDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGND 116

Query: 234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPR 293
             +       ++ +     +                        G+           G  
Sbjct: 117 VDNVHAVEPAKSVFEVKAKV-----------------RRAIEAEGIPYTYVSSNCFAGYF 159

Query: 294 MCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR 335
           +     R ++     A  ++ + + GDG     F    D+  
Sbjct: 160 L-----RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGT 196

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 61.4 bits (147), Expect = 2e-11
 Identities = 30/180 (16%), Positives = 56/180 (31%), Gaps = 26/180 (14%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
           +I++TG  G +G  +  +L  +   VI  D                 + ++     V   
Sbjct: 3   KILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKF 47

Query: 178 LLEV--DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 235
             E   + + + A   +    +       K N +G  N+   A  VGA  +  ST  V+ 
Sbjct: 48  FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFD 107

Query: 236 DPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMC 295
              + P  E    N      ++  +            + +    +  I R    YG    
Sbjct: 108 GEAKEPITEFDEVNPQSAYGKTKLEGEN---------FVKALNPKYYIVRTAWLYGDGNN 158

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 57.1 bits (136), Expect = 4e-10
 Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP 176
            ++VTG +G  G  +  +L    D  +      + + +  +    +    ++   D + P
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 64

Query: 177 LLLEVDQIYHLACPASPVHYKFNPVKTI 204
               +D +  L      +   F+P K  
Sbjct: 65  AFQGIDALVILTSAVPKMKPGFDPTKGG 92

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 57.7 bits (138), Expect = 4e-10
 Identities = 25/209 (11%), Positives = 47/209 (22%), Gaps = 9/209 (4%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---- 173
            I V G  G  G+ L+    A G  V    +  + +          PN  L +  +    
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVH--SLKGLIAEELQAIPNVTLFQGPLLNNV 62

Query: 174 --VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS 231
             ++ L       +      +                 GT+     +            +
Sbjct: 63  PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPA 122

Query: 232 EVYGDPLQHPQKETYWGNVNPIGVR-SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTY 290
                P    +       +    V    Y+    +                     F+  
Sbjct: 123 VPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPD 182

Query: 291 GPRMCIDDGRVVSNFVAQALRKEPLTVYG 319
            P   +D    V   + Q  +  P    G
Sbjct: 183 IPLPWLDAEHDVGPALLQIFKDGPQKWNG 211

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 55.3 bits (131), Expect = 2e-09
 Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 10/142 (7%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL 177
            I++ G  G VG  L   L   G+ +I +D        +        N + +   V +  
Sbjct: 2   NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKEFCGDFS------NPKGVAETVRK-- 52

Query: 178 LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP 237
            L  D I + A   +    +  P      N      +   A   GA  +  ST  V+   
Sbjct: 53  -LRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGT 111

Query: 238 LQHPQKETYWGNVNPIGVRSCY 259
              P +ET   +   +  ++  
Sbjct: 112 GDIPWQETDATSPLNVYGKTKL 133

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.1 bits (110), Expect = 7e-07
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF 161
           R+++ G  G  G HL+DR+++      V+      RK    H  
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIA---PARKALAEHPR 44

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (104), Expect = 5e-06
 Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 3/60 (5%)

Query: 112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRH 171
            + +   + + G +G  G  L+  ++ +G    V      GR++         N      
Sbjct: 10  FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVT---LIGRRKLTFDEEAYKNVNQEVV 66

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 17/133 (12%), Positives = 29/133 (21%), Gaps = 6/133 (4%)

Query: 97  VGFGAVNSGGKIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN 156
                V    K   G   KG + VV  G G VG      L   G  V++        +  
Sbjct: 5   TAAAGVALVVKA-AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAA 63

Query: 157 VMHHFGNPNFELIRHDV-----VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGT 211
                      +   +          +     ++        +  +          +V  
Sbjct: 64  ADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVAD 123

Query: 212 LNMLGLAKRVGAR 224
            N        G  
Sbjct: 124 YNAQPPLGIGGID 136

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.5 bits (88), Expect = 4e-04
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 1/91 (1%)

Query: 120 VVTGGAGFVGSHLVDRLIARGDSVIVVD-NFFTGRKENVMHHFGNPNFELIRHDVVEPLL 178
           V+  G+GFV    +D L   G  V V      + +K +       P    +  D      
Sbjct: 5   VLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE 64

Query: 179 LEVDQIYHLACPASPVHYKFNPVKTIKTNVV 209
           +    +     P +            K +VV
Sbjct: 65  VAKHDLVISLIPYTFHATVIKSAIRQKKHVV 95

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVD 147
           +  R++V GG G +GS  V    AR   V  +D
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASID 33

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 9/30 (30%), Positives = 19/30 (63%)

Query: 118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVD 147
           +++V GG G +GS +++     G +V+ +D
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNID 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	340
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.97
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.97
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.97
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.96
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.95
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.95
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.93
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.93
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.93
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.9
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.89
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.86
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.86
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.85
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.84
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.84
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.84
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.84
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.84
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.84
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.84
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.84
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.84
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.83
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.83
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.83
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.83
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.83
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.83
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.83
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.83
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.82
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.82
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.81
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.81
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.81
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.81
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.81
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.81
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.81
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.8
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.8
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.79
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.79
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.79
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.79
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.79
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.79
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.79
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.78
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.78
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.78
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.77
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.76
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.76
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.75
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.74
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.74
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.73
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.73
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.72
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.71
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.7
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.7
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.69
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.69
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.69
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.68
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.68
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.66
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.63
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.61
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.6
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.6
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.59
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.55
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.52
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.5
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.13
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.33
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.21
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.21
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.11
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.09
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.0
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.98
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.98
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.97
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.97
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.93
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.92
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.89
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.83
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.8
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.8
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.77
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.75
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.74
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.73
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.72
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.67
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.66
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.64
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.61
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.54
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.52
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.51
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.29
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.26
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.25
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.25
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.22
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.21
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.05
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.04
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.03
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	96.98
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.98
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	96.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.95
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.93
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.9
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.81
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.79
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.78
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	96.75
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.71
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.7
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.65
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.61
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.6
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.58
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.57
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.46
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.39
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.38
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.36
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.3
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.27
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.24
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.17
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.04
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.03
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	95.89
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.87
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	95.86
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.76
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.76
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.75
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.67
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.57
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.51
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	95.51
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.45
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.44
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.4
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.35
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.3
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.27
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.16
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.12
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.12
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.11
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.07
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.06
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.05
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.04
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.03
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.02
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.01
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.0
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.99
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.93
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.9
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.8
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	94.8
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.78
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.76
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.75
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.73
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.7
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.69
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.54
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.52
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.46
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.29
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.25
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.23
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.21
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.04
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.02
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.97
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.97
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.94
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.92
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	93.9
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.88
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	93.87
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.83
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.83
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.81
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.78
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.77
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.7
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.66
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.59
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	93.39
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.38
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	93.18
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.15
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.09
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.97
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.86
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	92.73
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.52
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.51
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	92.43
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.41
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.32
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	92.09
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.05
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	92.02
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	91.8
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	91.77
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.33
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.94
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.91
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.86
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.78
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.53
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	90.49
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	90.43
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.3
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	89.97
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.94
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	89.78
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.68
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.02
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.97
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	88.76
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.64
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.37
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.08
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.91
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	87.53
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	87.22
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.86
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.43
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	86.26
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	86.25
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.21
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.2
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	86.03
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.9
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.49
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	85.43
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.2
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	84.85
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.66
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.52
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	83.99
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.46
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	83.26
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	82.86
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	82.3
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	82.21
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.8
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	81.42
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	80.82
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	80.31

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-41  Score=306.33  Aligned_cols=223  Identities=71%  Similarity=1.156  Sum_probs=202.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHY  196 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~~  196 (340)
                      ||||||||+||||++|+++|+++|++|+++++......+.+.......++++.+.|+.+....++|+|||+|+......+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~~~   81 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNY   81 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCchhH
Confidence            68999999999999999999999999999998766666665555667789999999999988899999999997654445


Q ss_pred             cCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh
Q 019470          197 KFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG  276 (340)
Q Consensus       197 ~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~  276 (340)
                      ..++...+++|+.|+.+++++|++.+++|||+||++|||.....+.+|+.+...+|..|.+.|+.+|.++|.+++.+++.
T Consensus        82 ~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~  161 (312)
T d2b69a1          82 MYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ  161 (312)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            67888899999999999999999999999999999999998888999988877788889999999999999999999999


Q ss_pred             hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          277 AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       277 ~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|++++++||++||||+.......+++.++.++++++++.+++++.+.++|+|++|++++++.
T Consensus       162 ~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~  224 (312)
T d2b69a1         162 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  224 (312)
T ss_dssp             HCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             hCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHH
Confidence            999999999999999987766677999999999999999999999999999999999999875

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=8.5e-36  Score=273.90  Aligned_cols=216  Identities=32%  Similarity=0.499  Sum_probs=184.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCe------EEEEeCCCCC-cccccccccCCCceEEeeCccccc-----ccCCCCEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDS------VIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~------V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~V  184 (340)
                      |||||||||||||++|++.|+++|++      |+.+++.... ....+.......+++++..|..+.     ...++|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            68999999999999999999999984      5555554322 222333333456889999998664     34579999


Q ss_pred             EEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 019470          185 YHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGK  263 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK  263 (340)
                      +|+|+.........++...+++|+.|+.+++++|++.++ +|||+||+++||.....+++|+     .+..|.+.|+.+|
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~-----~~~~p~~~Y~~sK  155 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASK  155 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCC-----CCCCCCCHHHHHH
Confidence            999987655555667888899999999999999999997 8999999999999988888888     6778889999999


Q ss_pred             HHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          264 RTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       264 ~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ..+|.+++.+.++++++++++||++||||++  ....++..++.++++++++.++++|++.++|+|++|+|++++.
T Consensus       156 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~--~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~  229 (322)
T d1r6da_         156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQ--HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIAL  229 (322)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTC--CTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEECcCC--CcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHH
Confidence            9999999999999999999999999999975  3356889999999999999999999999999999999999875

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.4e-35  Score=273.88  Aligned_cols=219  Identities=26%  Similarity=0.330  Sum_probs=174.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc----cccc--cccCCCceEEeeCcccccc-----cC--CCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK----ENVM--HHFGNPNFELIRHDVVEPL-----LL--EVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~----~~~~--~~~~~~~~~~~~~D~~~~~-----~~--~~D~  183 (340)
                      |+|||||||||||++|+++|+++|++|++++|......    +.+.  ......+++++++|+.+..     +.  ++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            68999999999999999999999999999999643221    1111  1123457899999997642     22  4699


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC----eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChH
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCY  259 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~----~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y  259 (340)
                      |||+||..+......++...+++|+.||.+|+++|++.++    +|||+||+.|||.+...+++|+     ++..|.+.|
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~-----~~~~P~~~Y  156 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPY  156 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCSHH
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC-----CCCCCCChH
Confidence            9999998776667788899999999999999999999763    6999999999998888889998     566778999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhCC-CeEEecCCceeEccccHHHHHHHH
Q 019470          260 DEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFVSDLVRLT  337 (340)
Q Consensus       260 ~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v~Dva~a~  337 (340)
                      +.+|+.+|.+++.+.+.++++++++||+++|||+..... ...+..++..+..++ ....+|++++.++|+|++|+++++
T Consensus       157 ~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~  236 (357)
T d1db3a_         157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ  236 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence            999999999999999989999999999999999753221 223445555555554 456679999999999999999998


Q ss_pred             HhC
Q 019470          338 ETI  340 (340)
Q Consensus       338 ~~~  340 (340)
                      +.+
T Consensus       237 ~~~  239 (357)
T d1db3a_         237 WMM  239 (357)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            754

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=8e-35  Score=271.79  Aligned_cols=221  Identities=27%  Similarity=0.461  Sum_probs=180.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCe-EEEEeCCCCC-cccccccccCCCceEEeeCcccccc-----c--CCCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDS-VIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEPL-----L--LEVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~-----~--~~~D~Vih~  187 (340)
                      |+|||||||||||++|+++|+++|++ |+++++.... ....+.......+++++.+|+.+..     +  .++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            58999999999999999999999997 4556654322 2233444445678999999998752     1  268999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC----------CeEEEEeCcccccCCCCCCCCCCC-----CCCCCC
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG----------ARFLLTSTSEVYGDPLQHPQKETY-----WGNVNP  252 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~----------~~~i~~SS~~v~g~~~~~~~~E~~-----~~~~~~  252 (340)
                      |+..+......++...+++|+.|+.+++++|++.+          .+||++||+.+||.....+..|..     +...++
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            99765545556788899999999999999998764          279999999999976544433321     223466


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHH
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD  332 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D  332 (340)
                      ..|.+.|+.+|.++|.+++.+.+.++++++++||++||||+.  ....++..++.++++++++.++++|++.++|+|++|
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~--~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D  238 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH--FPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED  238 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC--CTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCC--CcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence            778899999999999999999999999999999999999975  335688999999999999999999999999999999


Q ss_pred             HHHHHHh
Q 019470          333 LVRLTET  339 (340)
Q Consensus       333 va~a~~~  339 (340)
                      +|++++.
T Consensus       239 ~a~ai~~  245 (361)
T d1kewa_         239 HARALHM  245 (361)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.1e-34  Score=268.43  Aligned_cols=221  Identities=27%  Similarity=0.380  Sum_probs=187.6

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc------ccccCCCceEEeeCccccc-----ccCCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV------MHHFGNPNFELIRHDVVEP-----LLLEVD  182 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~------~~~~~~~~~~~~~~D~~~~-----~~~~~D  182 (340)
                      .++|+|||||||||||++|+++|+++|++|++++|.........      ........++++.+|..+.     ...+.+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            45679999999999999999999999999999998554333211      1111224688899998775     345789


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      .|+|+++.........++...+++|+.|+.+++++|++.++ +|||+||+.+||...+.+.+|+     .+..|.+.|+.
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~  168 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYAV  168 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCC-----CCCCCCCcchH
Confidence            99999986554446677888999999999999999999997 9999999999999888888888     67778899999


Q ss_pred             HHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          262 GKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       262 sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|..+|.+++.+.+..+++++++||++|||++.....  ..++..++..+++++++.++++|.+.++|+|++|++.++..
T Consensus       169 sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~  248 (341)
T d1sb8a_         169 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL  248 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhh
Confidence            9999999999999989999999999999999765432  45788999999999999999999999999999999998654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=259.96  Aligned_cols=218  Identities=23%  Similarity=0.248  Sum_probs=174.0

Q ss_pred             CeE-EEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc----cccc---ccCCCceEEeeCccccccc-------CCC
Q 019470          117 LRI-VVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE----NVMH---HFGNPNFELIRHDVVEPLL-------LEV  181 (340)
Q Consensus       117 ~~v-lVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~----~~~~---~~~~~~~~~~~~D~~~~~~-------~~~  181 (340)
                      ||| ||||||||||++|+++|+++|++|++++|.......    .+..   .....+++++.+|+.+...       .++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            477 999999999999999999999999999996543221    1111   1112467899999977521       357


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC----eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA----RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRS  257 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~----~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~  257 (340)
                      ++++|+++.........+....+++|+.|+.+++++|+++++    +|||+||++|||.+...+++|+     .+..|.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~P~~  155 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRS  155 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCCS
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC-----CCCCCCC
Confidence            899999986544444566777889999999999999999874    7999999999998888888888     6677889


Q ss_pred             hHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC--ccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHH
Q 019470          258 CYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD--GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR  335 (340)
Q Consensus       258 ~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~  335 (340)
                      .|+.||.++|++++.+.++++++++++||+++|||+.....  ..+...+......+.+...++++++.++|+|++|+++
T Consensus       156 ~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~  235 (347)
T d1t2aa_         156 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHH
Confidence            99999999999999998889999999999999999753322  2233344555556788888999999999999999999


Q ss_pred             HHHh
Q 019470          336 LTET  339 (340)
Q Consensus       336 a~~~  339 (340)
                      ++..
T Consensus       236 a~~~  239 (347)
T d1t2aa_         236 AMWL  239 (347)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9875

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=3.3e-33  Score=258.95  Aligned_cols=223  Identities=26%  Similarity=0.354  Sum_probs=178.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeC--CCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN--FFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r--~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      .||+|||||||||||++|+++|+++|++|.++++  ................+++++.+|+.+.     .+.++|.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            3789999999999999999999999986555443  2222222222233456889999998764     45679999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCC---CCC----CCCCCCCCCCCCCCCChHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPL---QHP----QKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~---~~~----~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |+......+..++...+++|+.|+.+++++|+..+.++|++||+.+||...   ..+    .....+...++..|.+.|+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            987655445567888999999999999999999999999999999998531   111    1111222335677889999


Q ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          261 EGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|.++|.+++.+.++.+++++++||++||||+.  .....+..++.....+.++.+++++++.++|+|++|++++++.
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~--~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~  237 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ--HIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA  237 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC--CTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC--CccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHH
Confidence            9999999999999988999999999999999975  3456778888888899999999999999999999999999875

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-32  Score=251.59  Aligned_cols=219  Identities=23%  Similarity=0.376  Sum_probs=182.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~Ag  189 (340)
                      |||||||||||||++|+++|+++|+ +|+++++..+...    ......+++++.+|+.+.      ...++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~----~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS----RFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG----GGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchh----hhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            5899999999999999999999995 8999988543222    223456899999998653      3457999999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCC--CCCCCCCCChHHHHHHHHH
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWG--NVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~--~~~~~~~~~~Y~~sK~~~E  267 (340)
                      .........++...+..|+.|+.+++++|.+.+.+++++||+.+|+........|....  ......|.+.|+.+|..+|
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E  156 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchh
Confidence            76655556677889999999999999999999999999999999998777666665432  2244456788999999999


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCCC------CccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCID------DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++++.+.+.+|++++++||+.+||++....      .......++.++++++++.++++|++.++|+|++|++++++.
T Consensus       157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~  234 (342)
T d2blla1         157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR  234 (342)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHH
T ss_pred             hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeee
Confidence            999999999999999999999999865432      134678899999999999999999999999999999999875

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.9e-32  Score=247.93  Aligned_cols=218  Identities=22%  Similarity=0.224  Sum_probs=174.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc-cccccCCCceEEeeCccccccc-------CCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN-VMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~-------~~~D~Vih~A  188 (340)
                      |+|||||||||||++|+++|+++||+|++++|........ +.......++.++.+|+.+...       ...++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            5899999999999999999999999999999976543322 2222234578999999987521       2478888988


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      +.........++...+..|+.|+.+++++|++.++  +|++.||..+||.......+|+     ++..|.+.|+.+|..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  155 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLYG  155 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCC-----CCccccChhHHHHHHH
Confidence            76544445567888999999999999999999985  6888888999988877777777     6777889999999999


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHHHhC-CCeEEecCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      |.+++.+.++++++++++||+++|||...... .+.+..++.++..+ .+...++++++.++|+|++|+|++++.
T Consensus       156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~  230 (321)
T d1rpna_         156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL  230 (321)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHH
Confidence            99999999999999999999999999753222 22334445555554 455668999999999999999999875

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.9e-32  Score=253.15  Aligned_cols=220  Identities=25%  Similarity=0.356  Sum_probs=174.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-----cccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-----PLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-----~~~~~~D~Vih~Ag  189 (340)
                      ++|||||||||||||++|+++|+++|++|+++++........   ..  ...++..+|+.+     ..+.++|+|||+|+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~---~~--~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---DM--FCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---GG--TCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hc--ccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            567899999999999999999999999999999864432221   11  223455556544     24568999999998


Q ss_pred             CCCCCCC-cCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCC--CCCCCCCCCChHHHHHHH
Q 019470          190 PASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYW--GNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       190 ~~~~~~~-~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~--~~~~~~~~~~~Y~~sK~~  265 (340)
                      ....... ...+......|+.++.+++++|++.++ +||++||..+|+.....+..|...  ....+..|.+.|+.+|..
T Consensus        89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~  168 (363)
T d2c5aa1          89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA  168 (363)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence            6544332 456788899999999999999999997 899999999999887777666543  345677888999999999


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC---ccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD---GRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +|.+++.+.+++|++++++||+++||++.....   ......+........+...+++|.+.++|+|++|++++++.
T Consensus       169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~  245 (363)
T d2c5aa1         169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR  245 (363)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHH
Confidence            999999999999999999999999999754322   22333444555567788889999999999999999999875

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.3e-32  Score=248.75  Aligned_cols=218  Identities=24%  Similarity=0.457  Sum_probs=173.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc--cccCCCceEEeeCcccccc-----cC--CCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--HHFGNPNFELIRHDVVEPL-----LL--EVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~-----~~--~~D~Vih~  187 (340)
                      |||||||||||||++|+++|+++|++|++++|..........  +.....+++++++|+.+..     +.  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            689999999999999999999999999999986555443222  2234467899999997753     23  79999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      ||.........++...+++|+.|+.+++++|++.++ +||++||..+|+.....+..|++    ....|.+.|+.+|..+
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~p~~~Y~~sK~~~  156 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESF----PTGTPQSPYGKSKLMV  156 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTS----CCCCCSSHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccccccc----ccCCCcchHHHHHhhh
Confidence            997554445567889999999999999999999997 89999999999887776666654    4556778999999999


Q ss_pred             HHHHHHHHHh-hCCcEEEEEeCceeCCCCCCC--------CccHHHHHHHHHHhC-CCeEEecC------CceeEccccH
Q 019470          267 ETLTMDYHRG-AGVEVRIARIFNTYGPRMCID--------DGRVVSNFVAQALRK-EPLTVYGD------GKQTRSFQFV  330 (340)
Q Consensus       267 E~~v~~~~~~-~gi~~~ivRp~~i~G~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~------g~~~~~~v~v  330 (340)
                      |.++..+..+ .+++++++||+++||++....        ...++..++..+..+ +++.++|+      +.+.+||+|+
T Consensus       157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v  236 (338)
T d1udca_         157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV  236 (338)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred             hHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEE
Confidence            9999876655 489999999999999864321        124666666656554 56777664      7889999999


Q ss_pred             HHHHHHHH
Q 019470          331 SDLVRLTE  338 (340)
Q Consensus       331 ~Dva~a~~  338 (340)
                      +|++.++.
T Consensus       237 ~D~~~~~~  244 (338)
T d1udca_         237 MDLADGHV  244 (338)
T ss_dssp             HHHHHHHH
T ss_pred             eehhhhcc
Confidence            99997764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=7.4e-32  Score=246.20  Aligned_cols=210  Identities=23%  Similarity=0.319  Sum_probs=164.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc--CCCCEEEEcccCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL--LEVDQIYHLACPASP  193 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~~D~Vih~Ag~~~~  193 (340)
                      .|||||||||||||++|+++|+++|+.|+++++..+              +++.+.+..+..+  .++|.|+|+|+....
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            358999999999999999999999999988765321              1122222222222  358999999976432


Q ss_pred             CC-CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          194 VH-YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       194 ~~-~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                      .. ...+....++.|+.|+.+++++|++.++ +|||+||+++||.....+.+|+......+..+.+.|+.+|.++|++++
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~  147 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE  147 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence            22 2345667789999999999999999997 899999999999888888888866555555566789999999999999


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCC--CccHHH-----HHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCID--DGRVVS-----NFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+.+++|++++++||++||||+....  ...+..     .+.....++..+.+++++.+.++|+|++|+++++..
T Consensus       148 ~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~  222 (315)
T d1e6ua_         148 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIH  222 (315)
T ss_dssp             HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHH
Confidence            99999999999999999999975432  222222     234555567888999999999999999999998864

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=5e-31  Score=248.23  Aligned_cols=223  Identities=27%  Similarity=0.316  Sum_probs=169.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC---------------cc-cc--cccccCCCceEEeeCcccccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG---------------RK-EN--VMHHFGNPNFELIRHDVVEPL  177 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~---------------~~-~~--~~~~~~~~~~~~~~~D~~~~~  177 (340)
                      ||||||||||||||++|+++|+++||+|+++|+....               .. +.  ........+++++.+|+.+..
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            6899999999999999999999999999999742110               00 00  001122357899999997752


Q ss_pred             -----cC--CCCEEEEcccCCCCCCCcC---ChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCC
Q 019470          178 -----LL--EVDQIYHLACPASPVHYKF---NPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -----~~--~~D~Vih~Ag~~~~~~~~~---~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                           +.  ++|+|||+||.........   .+...+++|+.|+.+++++|++.+.  +|++.||..+|+.... +..|.
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~~  159 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEG  159 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCSS
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-ccccc
Confidence                 22  5799999998754333222   2456789999999999999999885  5778888888865432 22222


Q ss_pred             CC---------CCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCC---------------CccH
Q 019470          246 YW---------GNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCID---------------DGRV  301 (340)
Q Consensus       246 ~~---------~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~---------------~~~~  301 (340)
                      ++         ....+..|.+.|+.+|..+|.+++.+.++++++++++||++|||++....               ...+
T Consensus       160 ~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  239 (393)
T d1i24a_         160 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  239 (393)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             cccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence            11         11235667789999999999999999999999999999999999874321               1346


Q ss_pred             HHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          302 VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +..++.....++++.++|++.+.+||+|++|++++++.
T Consensus       240 i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~  277 (393)
T d1i24a_         240 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEI  277 (393)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHH
T ss_pred             hhhhhHHhhcCCeeEEeeecccccccccccchHHHHHH
Confidence            78899999999999999999999999999999999875

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=6.6e-30  Score=235.26  Aligned_cols=217  Identities=22%  Similarity=0.289  Sum_probs=164.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc----ccc---ccccCCCceEEeeCcccccc-------cCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK----ENV---MHHFGNPNFELIRHDVVEPL-------LLEVD  182 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~----~~~---~~~~~~~~~~~~~~D~~~~~-------~~~~D  182 (340)
                      |++||||||||||+||++.|+++||+|++++|......    ..+   ........+.+..+|+.+..       -.++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            68999999999999999999999999999999643211    111   11123456788899987642       13689


Q ss_pred             EEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC------CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019470          183 QIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG------ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVR  256 (340)
Q Consensus       183 ~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~------~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~  256 (340)
                      +|||+|+........+++...+..|+.++.++++++++.+      +++++.||+.+|+.. ..+.+|+     .+..|.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~-----~~~~p~  155 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSET-----TPFHPR  155 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTT-----SCCCCC
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCC-----CCCCCc
Confidence            9999999755444556788899999999999999997643      257777777777654 4556777     677888


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-ccHHHHHHHHH-HhCCCeEEecCCceeEccccHHHHH
Q 019470          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-GRVVSNFVAQA-LRKEPLTVYGDGKQTRSFQFVSDLV  334 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~v~v~Dva  334 (340)
                      +.|+.+|..+|.++..+.+.++++++++||++||||+..... ...+...+... ..+.+...++++.+.+||+|++|++
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a  235 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV  235 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence            999999999999999999999999999999999999753221 12223333333 3345667788999999999999999


Q ss_pred             HHHHh
Q 019470          335 RLTET  339 (340)
Q Consensus       335 ~a~~~  339 (340)
                      +++..
T Consensus       236 ~~~~~  240 (339)
T d1n7ha_         236 EAMWL  240 (339)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.96  E-value=1.8e-28  Score=229.88  Aligned_cols=224  Identities=24%  Similarity=0.348  Sum_probs=166.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHh-CCCeEEEEeCCCCCcc--------cc----------cccccCCCceEEeeCccccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIA-RGDSVIVVDNFFTGRK--------EN----------VMHHFGNPNFELIRHDVVEP  176 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~l~r~~~~~~--------~~----------~~~~~~~~~~~~~~~D~~~~  176 (340)
                      .|||||||||||||++|+++|++ .|++|+++|+......        +.          .........+.++.+|+.+.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            57999999999999999999997 6899999986322110        00          00111234678899999774


Q ss_pred             c--------cCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCC-C-
Q 019470          177 L--------LLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKE-T-  245 (340)
Q Consensus       177 ~--------~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E-~-  245 (340)
                      .        ..++|+|||+|+........++....++.|+.++.++++++++.++ +++++||..+|+........+ . 
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            2        2468999999997665555567778899999999999999999997 899999999887655433221 1 


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCC-------ccHHHHHHHHHH--------
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDD-------GRVVSNFVAQAL--------  310 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~-------~~~~~~~~~~~~--------  310 (340)
                      ......+..|.+.|+.+|..+|.+++.+.+.+|++++++||+++||++.....       ..+++.++..++        
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence            12233677788999999999999999999989999999999999999865432       234444444443        


Q ss_pred             --------hCCCeEEec------CCceeEccccHHHHHHHHHh
Q 019470          311 --------RKEPLTVYG------DGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       311 --------~~~~~~~~~------~g~~~~~~v~v~Dva~a~~~  339 (340)
                              .++++.++|      ||.+.+||+|++|++++++.
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~  284 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHIL  284 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHH
Confidence                    245556655      57889999999999999864

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=5.9e-29  Score=230.19  Aligned_cols=222  Identities=24%  Similarity=0.400  Sum_probs=163.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc--cccCCCceEEeeCcccccc-----c--CCCCEEEEc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM--HHFGNPNFELIRHDVVEPL-----L--LEVDQIYHL  187 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~-----~--~~~D~Vih~  187 (340)
                      |.|||||||||||++|+++|+++|++|+++++..........  ......+++++.+|+.+..     +  .++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            579999999999999999999999999999876544332221  2223457888999987643     1  279999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      |+.........++..+..+|+.|+.+++++|++.++ +||++||+.+||.....+..|. .....+..|.+.|+.+|..+
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~-~~e~~~~~p~~~Y~~sK~~~  160 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIP-IPEECPLGPTNPYGHTKYAI  160 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCS-BCTTSCCCCCSHHHHHHHHH
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCc-cccccCCCCCChhHhHHHHH
Confidence            997654455667788999999999999999999997 8999999999997654322221 11226777889999999999


Q ss_pred             HHHHHHHHHh--hCCcEEEEEeCceeCCCCCCC--------CccHHHHHHHHHHh-CCCeEEecCC------ceeEcccc
Q 019470          267 ETLTMDYHRG--AGVEVRIARIFNTYGPRMCID--------DGRVVSNFVAQALR-KEPLTVYGDG------KQTRSFQF  329 (340)
Q Consensus       267 E~~v~~~~~~--~gi~~~ivRp~~i~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~g------~~~~~~v~  329 (340)
                      |.+++.+.+.  .+++++++||+++||+.....        ...++..++..... ++++.++|++      ...+|+++
T Consensus       161 E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~  240 (347)
T d1z45a2         161 ENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH  240 (347)
T ss_dssp             HHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEE
T ss_pred             HHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeee
Confidence            9999988653  589999999999999753211        12355555554443 4566666654      45667778


Q ss_pred             HHHHHHHHHh
Q 019470          330 VSDLVRLTET  339 (340)
Q Consensus       330 v~Dva~a~~~  339 (340)
                      +.|++.+++.
T Consensus       241 ~~~~~~~~~~  250 (347)
T d1z45a2         241 VVDLAKGHIA  250 (347)
T ss_dssp             HHHHHHHHHH
T ss_pred             eecccccccc
Confidence            8887776543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5e-28  Score=223.61  Aligned_cols=219  Identities=25%  Similarity=0.407  Sum_probs=166.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc------cc--ccccCCCceEEeeCcccccc-----c--CCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE------NV--MHHFGNPNFELIRHDVVEPL-----L--LEV  181 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~------~~--~~~~~~~~~~~~~~D~~~~~-----~--~~~  181 (340)
                      |||||||||||||++|+++|+++|++|+++++.......      ..  .......++.++++|+.+..     +  .++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            589999999999999999999999999999874322111      00  11223467899999998752     1  357


Q ss_pred             CEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHH
Q 019470          182 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       182 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |+++|+||..+......++...++.|+.|+.+++++|++.++ +|+|+||+.+|+........+..    ....+.++|+
T Consensus        83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~----~~~~~~~~Y~  158 (346)
T d1ek6a_          83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH----PTGGCTNPYG  158 (346)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCSSHHH
T ss_pred             ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccc----cccccCChHH
Confidence            789999997655545567888999999999999999999997 89999999999876654443332    3344568899


Q ss_pred             HHHHHHHHHHHHHHHh-hCCcEEEEEeCceeCCCCCCC--------CccHHHHHHHHHHh-CCCeEEec------CCcee
Q 019470          261 EGKRTAETLTMDYHRG-AGVEVRIARIFNTYGPRMCID--------DGRVVSNFVAQALR-KEPLTVYG------DGKQT  324 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~-~gi~~~ivRp~~i~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~------~g~~~  324 (340)
                      .+|..+|..++.+.+. .++..+++||+++||++....        ...++..++..... +.++.+++      ++.+.
T Consensus       159 ~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~  238 (346)
T d1ek6a_         159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV  238 (346)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCee
Confidence            9999999999988765 589999999999999864321        23355555555544 45566554      47788


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      +||+|++|+|.++..
T Consensus       239 Rdfi~v~D~a~~~~~  253 (346)
T d1ek6a_         239 RDYIHVVDLAKGHIA  253 (346)
T ss_dssp             ECEEEHHHHHHHHHH
T ss_pred             EeEEEEEeccchhhh
Confidence            999999999987754

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.96  E-value=4.1e-28  Score=222.46  Aligned_cols=222  Identities=29%  Similarity=0.426  Sum_probs=168.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-cccccccCCCceEEeeCcccccc-----cC--CCCEEEEccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMHHFGNPNFELIRHDVVEPL-----LL--EVDQIYHLAC  189 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~-----~~--~~D~Vih~Ag  189 (340)
                      ||||||||||||++|+++|+++|++|+++++...... +.+.......+++++.+|+.+..     +.  ++|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            7999999999999999999999999999986533322 22222224467899999997642     22  4699999999


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeC-cccccCCCCCCCCCC-----------CCCCCCCCCCC
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTST-SEVYGDPLQHPQKET-----------YWGNVNPIGVR  256 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS-~~v~g~~~~~~~~E~-----------~~~~~~~~~~~  256 (340)
                      .........++...+++|+.||.+|+++|.+.++ ++|+.|| ..+++.....+..+.           .+....+..+.
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFH  161 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccc
Confidence            7654445557889999999999999999999986 6666666 445544332221111           11223556677


Q ss_pred             ChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCC-CCccHHHHHHHHHHh-----CCCeEEecCCceeEccccH
Q 019470          257 SCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCI-DDGRVVSNFVAQALR-----KEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       257 ~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~v~v  330 (340)
                      +.|+.+|...|.++..+.+.+++...++|+..+||+.... .....+..++..+++     ++++.++|+|.+.++|+|+
T Consensus       162 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v  241 (338)
T d1orra_         162 SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA  241 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEH
T ss_pred             cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecc
Confidence            8999999999999999988899999999999999875432 334566777776664     6789999999999999999


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|++++++.
T Consensus       242 ~D~~~~~~~  250 (338)
T d1orra_         242 EDMISLYFT  250 (338)
T ss_dssp             HHHHHHHHH
T ss_pred             cchhhHHHH
Confidence            999999764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.95  E-value=1.5e-27  Score=220.78  Aligned_cols=218  Identities=21%  Similarity=0.244  Sum_probs=167.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccccc-------CCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLL-------LEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-------~~~D~Vih~  187 (340)
                      ++|||||||||||||++|++.|+++|++|++++|.................++++.+|+.++..       .++|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            5789999999999999999999999999999999766544433222234578999999977532       257999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-e-EEEEeCcccccCCCC-CCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-R-FLLTSTSEVYGDPLQ-HPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~-~i~~SS~~v~g~~~~-~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      |+........+++...+.+|+.|+.+++++|++.+. + +++.|+..++..... .+..|+     .+..|.+.|+.+|.
T Consensus        87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-----~~~~p~~~y~~~k~  161 (356)
T d1rkxa_          87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNSKG  161 (356)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHHHH
T ss_pred             hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccc-----cccCCCCccccccc
Confidence            987655445667888999999999999999999874 4 555555544444333 333333     56667789999999


Q ss_pred             HHHHHHHHHHH---------hhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHH
Q 019470          265 TAETLTMDYHR---------GAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR  335 (340)
Q Consensus       265 ~~E~~v~~~~~---------~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~  335 (340)
                      ..|..++.+..         .+++.++++||+++|||++. ....++..++..+..+.+ .+++++++.++++|++|++.
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~-~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~v~D~~~  239 (356)
T d1rkxa_         162 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW-ALDRIVPDILRAFEQSQP-VIIRNPHAIRPWQHVLEPLS  239 (356)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC-CSSCHHHHHHHHHHTTCC-EECSCTTCEECCEETHHHHH
T ss_pred             cchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcc-hhhHHHHHHHHHHhCCCc-eEEeeccccccccccccccc
Confidence            99999887765         34788999999999999742 234577777776655444 56788899999999999999


Q ss_pred             HHHh
Q 019470          336 LTET  339 (340)
Q Consensus       336 a~~~  339 (340)
                      ++..
T Consensus       240 a~~~  243 (356)
T d1rkxa_         240 GYLL  243 (356)
T ss_dssp             HHHH
T ss_pred             hhhh
Confidence            9764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.95  E-value=1.6e-27  Score=220.21  Aligned_cols=220  Identities=20%  Similarity=0.213  Sum_probs=162.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---c-ccCCCceEEeeCcccc-----cccCCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---H-HFGNPNFELIRHDVVE-----PLLLEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~-~~~~~~~~~~~~D~~~-----~~~~~~D~Vi  185 (340)
                      +|++||||||+||||++|+++|+++|++|++++|+.... ..+.   . .........+.+|+.+     +.+.++|+|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL-ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhH-HHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            588999999999999999999999999999999864322 1111   1 1122233456667654     4567899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcC-C-eEEEEeCcccccCCC----CCCCCCCCC-----------C
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPL----QHPQKETYW-----------G  248 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~-~-~~i~~SS~~v~g~~~----~~~~~E~~~-----------~  248 (340)
                      |+++...   ...++...++.|+.|+.+++++|.+.+ + +|||+||+.+++...    .....|+.|           .
T Consensus        89 ~~a~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  165 (342)
T d1y1pa1          89 HIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP  165 (342)
T ss_dssp             ECCCCCS---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred             hhccccc---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence            9998633   445677888999999999999999975 4 899999976543221    122333332           1


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCCCeEEecCCceeE
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTR  325 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~  325 (340)
                      ...+..|.+.|+.+|..+|.+++.+.+++  +++++++||+.+|||...+. .......++..+++++..... .+.+.+
T Consensus       166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~  244 (342)
T d1y1pa1         166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQ  244 (342)
T ss_dssp             TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSE
T ss_pred             ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccce
Confidence            23455566789999999999999998765  57889999999999975433 344677788888887765443 345678


Q ss_pred             ccccHHHHHHHHHh
Q 019470          326 SFQFVSDLVRLTET  339 (340)
Q Consensus       326 ~~v~v~Dva~a~~~  339 (340)
                      +|+|++|+|++++.
T Consensus       245 ~~v~v~Dva~~~i~  258 (342)
T d1y1pa1         245 YYVSAVDIGLLHLG  258 (342)
T ss_dssp             EEEEHHHHHHHHHH
T ss_pred             eeeeHHHHHHHHHH
Confidence            99999999999764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-26  Score=200.61  Aligned_cols=189  Identities=16%  Similarity=0.081  Sum_probs=139.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCcc-----cccccCCCCEEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-----VEPLLLEVDQIY  185 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~D~Vi  185 (340)
                      .+++|+|||||||||||++|+++|+++|.  +|++++|++........     ..++....|+     ....+.++|+||
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~-----~~i~~~~~D~~~~~~~~~~~~~~d~vi   85 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-----KNVNQEVVDFEKLDDYASAFQGHDVGF   85 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-----GGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc-----ceeeeeeeccccccccccccccccccc
Confidence            35678999999999999999999999995  89999997654333222     2344444454     335678899999


Q ss_pred             EcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 019470          186 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKR  264 (340)
Q Consensus       186 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~  264 (340)
                      |++|..   ....+.....++|+.++.+++++|++.++ +||++||..+++.                  +.+.|+.+|+
T Consensus        86 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~------------------~~~~Y~~~K~  144 (232)
T d2bkaa1          86 CCLGTT---RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFLYLQVKG  144 (232)
T ss_dssp             ECCCCC---HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHH
T ss_pred             cccccc---ccccchhhhhhhcccccceeeecccccCccccccCCccccccC------------------ccchhHHHHH
Confidence            999742   22334567788999999999999999998 7999999887532                  1267999999


Q ss_pred             HHHHHHHHHHHhhCCc-EEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          265 TAETLTMDYHRGAGVE-VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       265 ~~E~~v~~~~~~~gi~-~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+|..+++    .+++ ++|+||+.+||++.   ..+....++..++...     +........|+++|+|++++.
T Consensus       145 ~~E~~l~~----~~~~~~~IlRP~~i~G~~~---~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         145 EVEAKVEE----LKFDRYSVFRPGVLLCDRQ---ESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             HHHHHHHT----TCCSEEEEEECCEEECTTG---GGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHH
T ss_pred             Hhhhcccc----ccccceEEecCceeecCCC---cCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHH
Confidence            99998744    4664 89999999999863   3344455555554432     222334457999999998764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1e-25  Score=203.11  Aligned_cols=212  Identities=23%  Similarity=0.278  Sum_probs=152.9

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeC-cccc-----cccCCCCEEEEcccCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRH-DVVE-----PLLLEVDQIYHLACPA  191 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~-D~~~-----~~~~~~D~Vih~Ag~~  191 (340)
                      |||||||||||++|+++|+++|+ +|+++++.........  .......+..+. |..+     .....+++|+|.|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN--LVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHH--HHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhc--ccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            89999999999999999999996 7999986544332211  112223333332 2222     2445789999999853


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTM  271 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~  271 (340)
                      .  ....+.....+.|+.++.+++++++..++++++.||+.+++.+......|+     .+..+.+.|+.+|..+|.+++
T Consensus        80 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~-----~~~~~~~~Y~~~K~~~e~~~~  152 (307)
T d1eq2a_          80 S--TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLFDEYVR  152 (307)
T ss_dssp             C--TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHHHHHHH
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccchhhhhcc
Confidence            3  334466778889999999999999999999999999888876655554444     445667899999999999999


Q ss_pred             HHHHhhCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeE-EecCCceeEccccHHHHHHHHHh
Q 019470          272 DYHRGAGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLT-VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       272 ~~~~~~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .+.++++++++++||+++|||+....  ...++..+...+..++... ..+++...++|+|++|++.++..
T Consensus       153 ~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~  223 (307)
T d1eq2a_         153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLW  223 (307)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHH
T ss_pred             ccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHH
Confidence            99998999999999999999976432  2345666777777776544 45788889999999999999864

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.93  E-value=5.3e-26  Score=203.14  Aligned_cols=192  Identities=21%  Similarity=0.257  Sum_probs=157.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPV  194 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~  194 (340)
                      |||||||||||||++|+++|.++|++|++++|..               +|+.+.+..++.+.  ++|+|||+|+.....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~~   66 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD   66 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccccc
Confidence            6899999999999999999999999999998842               12222222233333  579999999875544


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  274 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~  274 (340)
                      .....+......|+....++.+.++..+..++++||..+|+.....+..|.     ++..+...|+.+|...|.+++   
T Consensus        67 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~-----~~~~~~~~~~~~k~~~e~~~~---  138 (281)
T d1vl0a_          67 KCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGENFVK---  138 (281)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHHHHHH---
T ss_pred             cccccchhhcccccccccccccccccccccccccccceeeecccccccccc-----ccccchhhhhhhhhHHHHHHH---
Confidence            455667788899999999999999999889999999999998888888887     566777899999999998874   


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                       +.+.+++++||+++||++.     ++...++..+.+++.+.+.++  +.++++|++|+++++..
T Consensus       139 -~~~~~~~i~R~~~vyG~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~~~~~~~  195 (281)
T d1vl0a_         139 -ALNPKYYIVRTAWLYGDGN-----NFVKTMINLGKTHDELKVVHD--QVGTPTSTVDLARVVLK  195 (281)
T ss_dssp             -HHCSSEEEEEECSEESSSS-----CHHHHHHHHHHHCSEEEEESS--CEECCEEHHHHHHHHHH
T ss_pred             -HhCCCccccceeEEeCCCc-----ccccchhhhhccCCceeecCC--ceeccchhhhhhhhhhh
Confidence             4588999999999999863     567778888888888877764  78999999999999875

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.5e-25  Score=189.76  Aligned_cols=182  Identities=15%  Similarity=0.135  Sum_probs=139.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEcc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHLA  188 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~A  188 (340)
                      |.+|||+||||||+||++++++|+++|++|++++|++.....     ....+++++.+|+.+.     .+.++|+|||++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-----~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~   75 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-----ccccccccccccccchhhHHHHhcCCCEEEEEe
Confidence            457899999999999999999999999999999997554322     2235678899998764     577899999999


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      |......    +   .+++..++.+++++++++++ |||++||.+++++....+            .....|...|..+|
T Consensus        76 g~~~~~~----~---~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~------------~~~~~~~~~~~~~e  136 (205)
T d1hdoa_          76 GTRNDLS----P---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP------------PRLQAVTDDHIRMH  136 (205)
T ss_dssp             CCTTCCS----C---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC------------GGGHHHHHHHHHHH
T ss_pred             ccCCchh----h---hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccc------------ccccccchHHHHHH
Confidence            8643211    1   13678899999999999997 899999998876543321            11246888999998


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      ++++    +.+++|+++||+.+++...                 .....++.++.....+++++|+|++++.+
T Consensus       137 ~~l~----~~~~~~tiirp~~~~~~~~-----------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~  188 (205)
T d1hdoa_         137 KVLR----ESGLKYVAVMPPHIGDQPL-----------------TGAYTVTLDGRGPSRVISKHDLGHFMLRC  188 (205)
T ss_dssp             HHHH----HTCSEEEEECCSEEECCCC-----------------CSCCEEESSSCSSCSEEEHHHHHHHHHHT
T ss_pred             HHHH----hcCCceEEEecceecCCCC-----------------cccEEEeeCCCCCCCcCCHHHHHHHHHHH
Confidence            8764    4699999999999987532                 12334555667778899999999998753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.90  E-value=8.2e-24  Score=189.89  Aligned_cols=196  Identities=19%  Similarity=0.146  Sum_probs=147.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcccCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLACPASPV  194 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~Ag~~~~~  194 (340)
                      |||||||||||||++|++.|.++|+ ++++++....           ...|+.+.+..+..+.  ++|+|||+||.....
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~   68 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD   68 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------ccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence            6899999999999999999999986 5555553221           0112222222223333  579999999976655


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYH  274 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~  274 (340)
                      ....++...++.|+.++.+++++|++.+++++++||+.+|+...+.+..|+     .+..|.+.|+.+|..+|..++.+ 
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~-----~~~~p~~~y~~~k~~~e~~~~~~-  142 (298)
T d1n2sa_          69 KAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEKALQDN-  142 (298)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHHHHHHH-
T ss_pred             ccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccc-----cccCCCchHhhhhhhhhhhHHhh-
Confidence            567788889999999999999999999999999999999998888888888     56678899999999999987554 


Q ss_pred             HhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          275 RGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       275 ~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                         .....++|++..|+..    .......+...+..+..+...+  .+..+++|++|+++++..
T Consensus       143 ---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~  198 (298)
T d1n2sa_         143 ---CPKHLIFRTSWVYAGK----GNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAH  198 (298)
T ss_dssp             ---CSSEEEEEECSEECSS----SCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHH
T ss_pred             ---hcccccccccceeecc----CCccchhhhhhhcccceeeccc--ceeecccccchHHHHHHH
Confidence               4456777877766543    2234445556666666666554  468899999999988754

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=6.8e-24  Score=182.37  Aligned_cols=180  Identities=19%  Similarity=0.181  Sum_probs=125.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCcc---cccccCCCCEEEEcccC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDV---VEPLLLEVDQIYHLACP  190 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~D~Vih~Ag~  190 (340)
                      .|+|||||||||||++|+++|+++|+  +|+++.|+.....         ..++....|+   .+....++|+|||++|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------PRLDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------TTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------ccccccccchhhhhhccccchheeeeeeee
Confidence            36999999999999999999999998  6777776432221         2233333333   23334568999999874


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETL  269 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  269 (340)
                      .  .....+...+.+.|+.++.+++++|++.++ +|+++||.++++.                  +.+.|..+|+.+|+.
T Consensus        73 ~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~------------------~~~~y~~~K~~~E~~  132 (212)
T d2a35a1          73 T--IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELEQA  132 (212)
T ss_dssp             C--HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHHHH
T ss_pred             e--ccccccccccccchhhhhhhcccccccccccccccccccccccc------------------cccchhHHHHHHhhh
Confidence            3  122345667889999999999999999997 8999999887642                  126799999999998


Q ss_pred             HHHHHHhhCC-cEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          270 TMDYHRGAGV-EVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       270 v~~~~~~~gi-~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      ++    +.++ +++++||+.|||+...   .++...+      ...+.....  ..+..||++|+|++++.
T Consensus       133 l~----~~~~~~~~I~Rp~~v~G~~~~---~~~~~~~------~~~~~~~~~--~~~~~i~v~DvA~ai~~  188 (212)
T d2a35a1         133 LQ----EQGWPQLTIARPSLLFGPREE---FRLAEIL------AAPIARILP--GKYHGIEACDLARALWR  188 (212)
T ss_dssp             HT----TSCCSEEEEEECCSEESTTSC---EEGGGGT------TCCCC------CHHHHHHHHHHHHHHHH
T ss_pred             cc----ccccccceeeCCcceeCCccc---ccHHHHH------HHHHhhccC--CCCcEEEHHHHHHHHHH
Confidence            74    3455 5999999999998642   2211111      111111111  23457999999999875

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.86  E-value=1.3e-22  Score=182.97  Aligned_cols=194  Identities=16%  Similarity=0.162  Sum_probs=137.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---cccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      .+||||||||||||++|+++|+++|++|++++|........   ....+...+++++.+|+.+.     .+.++++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            45799999999999999999999999999999975543321   11223446788999988764     46789999998


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTA  266 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~  266 (340)
                      ++....           ..|..++.+++++|++.+. ++++.||.+++.....           .+..+...|...|..+
T Consensus        83 ~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~-----------~~~~~~~~~~~~~~~~  140 (312)
T d1qyda_          83 LAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME-----------HALQPGSITFIDKRKV  140 (312)
T ss_dssp             CCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCC-----------CCCSSTTHHHHHHHHH
T ss_pred             hhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcc-----------cccchhhhhhHHHHHH
Confidence            874321           2456667788899988875 8888888766543222           2333445666666665


Q ss_pred             HHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          267 ETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       267 E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +..    ..+.+++++++||+.+||+......    ..+......++.+.+++++++.++|+|++|+|++++.
T Consensus       141 ~~~----~~~~~~~~~i~r~~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  205 (312)
T d1qyda_         141 RRA----IEAASIPYTYVSSNMFAGYFAGSLA----QLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIK  205 (312)
T ss_dssp             HHH----HHHTTCCBCEEECCEEHHHHTTTSS----CTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHH
T ss_pred             HHh----hcccccceEEeccceeecCCccchh----hHHHHhhhcccccccccccccccceeeHHHHHHHHHH
Confidence            554    4667999999999999997432110    1111112245667778999999999999999999864

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=7.9e-21  Score=166.50  Aligned_cols=194  Identities=15%  Similarity=0.113  Sum_probs=141.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      |++++|+++||||+++||.+++++|+++|++|++++|+.+...+.    ....+...+.+|+.++.            +.
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~----~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA----AEAVGAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHHcCCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999999964332222    12235677888987642            34


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----CC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----GA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..++|++.+++|+.++.++.+++...    +. .++++||....+.              
T Consensus        77 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~--------------  142 (242)
T d1ulsa_          77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN--------------  142 (242)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC--------------
T ss_pred             CceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC--------------
Confidence            6999999999765443    22458899999999999998877543    33 5777777543322              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                         .....|+.+|++.+.+++.++.+   +|++++.|.||.|-.+...    ...+.+...+.+..++.         -+
T Consensus       143 ---~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~pl~---------R~  206 (242)
T d1ulsa_         143 ---LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA----KVPEKVREKAIAATPLG---------RA  206 (242)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS----SSCHHHHHHHHHTCTTC---------SC
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhh----cCCHHHHHHHHhcCCCC---------CC
Confidence               12268999999999999999876   4899999999999776432    12233444555544432         25


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ...+|++++++.
T Consensus       207 ~~pedia~~v~f  218 (242)
T d1ulsa_         207 GKPLEVAYAALF  218 (242)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            568899888754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.85  E-value=1.1e-20  Score=166.22  Aligned_cols=164  Identities=19%  Similarity=0.161  Sum_probs=125.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+.....+...+. ...++..+.+|+.++.            +.+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHH-cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999999754332222222 2357888999997752            347


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..++|++.+++|+.++.++.+++    ++.+ .++|++||.....                
T Consensus        81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----------------  144 (247)
T d2ew8a1          81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----------------  144 (247)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----------------
T ss_pred             CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc----------------
Confidence            999999999865443    22468899999999999988876    3344 3899999976431                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+.
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  189 (247)
T d2ew8a1         145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT  189 (247)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred             cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence            1122268999999999999999876   48999999999997654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.84  E-value=9.2e-22  Score=176.22  Aligned_cols=189  Identities=15%  Similarity=0.195  Sum_probs=133.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc----ccccCCCceEEeeCccccc-----ccCCCCEEEE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV----MHHFGNPNFELIRHDVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~----~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih  186 (340)
                      .|||||||||||||++++++|+++|++|++++|.........    ...+....++++.+|+.+.     .+.+++.|+|
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeee
Confidence            468999999999999999999999999999999765433211    1122345678888888664     3568999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRT  265 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  265 (340)
                      +++.               .+..++.+++++++..++ ++++.||........            ........|...+..
T Consensus        83 ~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~------------~~~~~~~~~~~~~~~  135 (307)
T d1qyca_          83 TVGS---------------LQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNV------------HAVEPAKSVFEVKAK  135 (307)
T ss_dssp             CCCG---------------GGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSC------------CCCTTHHHHHHHHHH
T ss_pred             cccc---------------cccchhhHHHHHHHHhccccceeeeccccccccc------------ccccccccccccccc
Confidence            8863               345566788899998886 777777754332111            111112334444444


Q ss_pred             HHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHhC
Q 019470          266 AETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTETI  340 (340)
Q Consensus       266 ~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~~  340 (340)
                      .+.    +..+.+++++++||+++||+....     +..+.....++....+++++++.++|+|++|+|++++.+
T Consensus       136 ~~~----~~~~~~~~~~i~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (307)
T d1qyca_         136 VRR----AIEAEGIPYTYVSSNCFAGYFLRS-----LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  201 (307)
T ss_dssp             HHH----HHHHHTCCBEEEECCEEHHHHTTT-----TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             ccc----hhhccCCCceecccceecCCCccc-----hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHH
Confidence            444    445679999999999999975321     122333445567778889999999999999999998764

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.84  E-value=1.3e-20  Score=164.61  Aligned_cols=188  Identities=17%  Similarity=0.125  Sum_probs=133.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+++||++++++|+++|++|++++|+....          ..+..+.+|+.++.            +.+
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   73 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQGP   73 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999965432          23455677776642            346


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..++|++.+++|+.++..+.+++    ++.+. ++|++||......               
T Consensus        74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~---------------  138 (237)
T d1uzma1          74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG---------------  138 (237)
T ss_dssp             CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------
T ss_pred             ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC---------------
Confidence            999999999765443    23468899999999988887755    44444 8999999664311               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+   +|+++++|.||.|..+...    .+.+.....+.+..++         .-+.
T Consensus       139 -~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~pl---------~R~~  204 (237)
T d1uzma1         139 -IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR----ALDERIQQGALQFIPA---------KRVG  204 (237)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HSCHHHHHHHGGGCTT---------CSCB
T ss_pred             -CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh----ccCHHHHHHHHhcCCC---------CCCc
Confidence             112268999999999999999876   4899999999999664211    0112222333332222         2366


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      ..+|+|++++.
T Consensus       205 ~pedvA~~v~f  215 (237)
T d1uzma1         205 TPAEVAGVVSF  215 (237)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            78999988764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=4.1e-21  Score=168.47  Aligned_cols=196  Identities=16%  Similarity=0.122  Sum_probs=141.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      ++++|+++||||+++||+++++.|+++|++|++.+|+++...+ +.+.+ ..++..+.+|+.++            .+.+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA-ISDYL-GANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHh-CCCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            4688999999999999999999999999999999997543322 22222 23577888998774            2346


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||.......    .+++++.+++|+.++..+.+++    ++.+ .++|++||......               
T Consensus        79 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~---------------  143 (243)
T d1q7ba_          79 VDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG---------------  143 (243)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC---------------
T ss_pred             cceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC---------------
Confidence            9999999997654442    2458889999999999998877    3334 38999999664311               


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccc
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  328 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v  328 (340)
                       ......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+..    ..+.+.....+.+..++         .-+.
T Consensus       144 -~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~----~~~~~~~~~~~~~~~pl---------~R~~  209 (243)
T d1q7ba_         144 -NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT----RALSDDQRAGILAQVPA---------GRLG  209 (243)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH----HTSCHHHHHHHHTTCTT---------SSCB
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh----hhhhhhHHHHHHhcCCC---------CCCC
Confidence             112268999999999999999876   489999999999865421    11112233334343332         2366


Q ss_pred             cHHHHHHHHHh
Q 019470          329 FVSDLVRLTET  339 (340)
Q Consensus       329 ~v~Dva~a~~~  339 (340)
                      ..+|+|++++.
T Consensus       210 ~pedvA~~v~f  220 (243)
T d1q7ba_         210 GAQEIANAVAF  220 (243)
T ss_dssp             CHHHHHHHHHH
T ss_pred             CHHHHHHHHHH
Confidence            78999988754

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.1e-20  Score=166.96  Aligned_cols=200  Identities=16%  Similarity=0.124  Sum_probs=143.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+...+...+. -...++..+.+|+.++.            +
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999654322211111 12346788999998752            3


Q ss_pred             CCCCEEEEcccCCCCCCC---cCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~---~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|++|||||.......   .++|++.+++|+.++.++.+.+..    .+ .++|++||.....               
T Consensus        87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~---------------  151 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN---------------  151 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC---------------
T ss_pred             CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc---------------
Confidence            479999999997654433   345888999999999998876633    33 3899999966431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                       +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+...   ..+-+.....+.+..++.         -+
T Consensus       152 -~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~---~~~~~e~~~~~~~~~pl~---------R~  218 (255)
T d1fmca_         152 -KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---SVITPEIEQKMLQHTPIR---------RL  218 (255)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH---TTCCHHHHHHHHHTCSSC---------SC
T ss_pred             -cccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhh---ccCCHHHHHHHHhcCCCC---------CC
Confidence             1122368999999999999999876   4899999999999665311   011133444444444332         25


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ...+|+|++++.
T Consensus       219 g~pedvA~~v~f  230 (255)
T d1fmca_         219 GQPQDIANAALF  230 (255)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            678899988764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.84  E-value=2.5e-20  Score=163.33  Aligned_cols=163  Identities=18%  Similarity=0.140  Sum_probs=126.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|+++||||+++||+++++.|+++|++|++++|+++...+.. +.+ ..++..+.+|+.++.            +.+
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMA-AEL-ADAARYVHLDVTQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHh-hCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            578999999999999999999999999999999999754332222 222 246778889997752            346


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||.......    .++|++.+++|+.++.++++.+    ++.+. ++|++||...+.                
T Consensus        81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----------------  144 (244)
T d1nffa_          81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----------------  144 (244)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc----------------
Confidence            9999999997654432    2458899999999999988866    33333 899999976431                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      +......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+.
T Consensus       145 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  189 (244)
T d1nffa_         145 GTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM  189 (244)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChh
Confidence            1122368999999999999999876   48999999999997653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=7.5e-21  Score=166.64  Aligned_cols=198  Identities=19%  Similarity=0.112  Sum_probs=140.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc--------ccCCCCE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------LLLEVDQ  183 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~~D~  183 (340)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+...+... ..  ..+..+.+|+.++        .+.++|+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-~~--~~~~~~~~Dv~~~~~v~~~~~~~g~iDi   77 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAK-EC--PGIEPVCVDLGDWDATEKALGGIGPVDL   77 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HS--TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hc--CCCeEEEEeCCCHHHHHHHHHHcCCCeE
Confidence            36789999999999999999999999999999999996543322221 21  3567788888764        2457999


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c-C-CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V-G-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~-~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|||||......    ..++++..+++|+.++..+.+++..    . + .++|++||.....                +.
T Consensus        78 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~~  141 (242)
T d1cyda_          78 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------TF  141 (242)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CC
T ss_pred             EEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc----------------cC
Confidence            999999765443    2335888999999999999886632    2 2 3899999976432                11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      .....|+.+|++.+.+++.++.+   +|+++++|.||.|-.+.......  .+.+...+.+..++         .-+...
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~pl---------~R~~~p  210 (242)
T d1cyda_         142 PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA--DPEFARKLKERHPL---------RKFAEV  210 (242)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC--CHHHHHHHHHHSTT---------SSCBCH
T ss_pred             CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC--CHHHHHHHHhcCCC---------CCCcCH
Confidence            22367999999999999999876   48999999999986542100000  02233334333332         236678


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|++++++.
T Consensus       211 eeva~~v~f  219 (242)
T d1cyda_         211 EDVVNSILF  219 (242)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988764

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.84  E-value=1.4e-20  Score=166.60  Aligned_cols=199  Identities=16%  Similarity=0.090  Sum_probs=141.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|+++||||+++||.+++++|+++|++|++++|+.+...+...+.+  ...++..+.+|+.++.            +
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999997543322222221  2346788899997752            3


Q ss_pred             CCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcCC--eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVGA--RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~~--~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .++|++|||||...+...    .+++++.+++|+.++.++.+++    ++.+.  .+|++||.....             
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~-------------  150 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI-------------  150 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-------------
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc-------------
Confidence            479999999998655442    3458889999999998888776    33342  588999966431             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHH-HHHHHHHHhCCCeEEecCCcee
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVV-SNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                         +......|+.+|++.+.+++.++.+   +|+++++|.||.|..+...   ..+. +.....+.+..++         
T Consensus       151 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~---~~~~~~~~~~~~~~~~pl---------  215 (261)
T d1geea_         151 ---PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA---EKFADPEQRADVESMIPM---------  215 (261)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH---HHHHSHHHHHHHHTTCTT---------
T ss_pred             ---cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh---hhcCCHHHHHHHHhcCCC---------
Confidence               1122367999999999999999876   4899999999999765321   0110 1222333333332         


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      .-+...+|+|++++.
T Consensus       216 ~R~~~pediA~~v~f  230 (261)
T d1geea_         216 GYIGEPEEIAAVAAW  230 (261)
T ss_dssp             SSCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            225678999998764

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.84  E-value=1.7e-20  Score=165.38  Aligned_cols=162  Identities=17%  Similarity=0.159  Sum_probs=126.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+++||.+++++|+++|++|++++|+.+...+... .+ ..++..+.+|+.++.            +.+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR-EL-GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hh-CCceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999997543332222 22 246788999997752            347


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||......    ..+++++.+++|+.++.++.+++.    +.+ .++|++||...+.                
T Consensus        80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----------------  143 (254)
T d1hdca_          80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------------  143 (254)
T ss_dssp             CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc----------------
Confidence            999999999865443    223588899999999999988773    334 3999999976431                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      +......|+.+|++.+.+++.++.+   +|+++++|.||.|..+
T Consensus       144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~  187 (254)
T d1hdca_         144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP  187 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence            1122368999999999999999876   4899999999998553

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.84  E-value=1.3e-20  Score=166.04  Aligned_cols=198  Identities=12%  Similarity=-0.016  Sum_probs=142.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      .+++|++|||||+++||++++++|+++|++|++++|+.+...+...+. ....++..+.+|+.++.            +.
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK   86 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999999654332211111 12346888999998752            34


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......    ..+++++.+++|+.++..+.+++    ++.+ .++|++||......              
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~--------------  152 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG--------------  152 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--------------
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC--------------
Confidence            7999999999765443    22468899999999998888866    3334 39999999664311              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEcc
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSF  327 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  327 (340)
                        ......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+...    ...+.+...+.+..++.         -+
T Consensus       153 --~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~----~~~~~~~~~~~~~~pl~---------R~  217 (251)
T d2c07a1         153 --NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD----KISEQIKKNIISNIPAG---------RM  217 (251)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------CCHHHHHHHHTTCTTS---------SC
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccc----ccCHHHHHHHHhcCCCC---------CC
Confidence              112267999999999999999876   4899999999999776421    12234445555544332         26


Q ss_pred             ccHHHHHHHHHh
Q 019470          328 QFVSDLVRLTET  339 (340)
Q Consensus       328 v~v~Dva~a~~~  339 (340)
                      ...+|++++++.
T Consensus       218 ~~pedvA~~v~f  229 (251)
T d2c07a1         218 GTPEEVANLACF  229 (251)
T ss_dssp             BCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHH
Confidence            678899888753

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2e-20  Score=164.09  Aligned_cols=197  Identities=18%  Similarity=0.103  Sum_probs=140.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc--------ccCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------LLLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~~D~V  184 (340)
                      .+++|++|||||+++||++++++|+++|++|++++|+.+...+.. ..+  ..+..+.+|+.++        .+.++|++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~-~~~--~~~~~~~~Dv~d~~~v~~~~~~~g~iDil   80 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-REC--PGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHS--TTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-Hhc--CCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence            578999999999999999999999999999999999754332222 122  3467778888764        34579999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH-----cC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR-----VG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~-----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      |||||......    ..++++..+++|+.++..+.+++..     .+ .++|++||.....                +..
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----------------~~~  144 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------AVT  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCT
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc----------------ccc
Confidence            99999765443    2346888999999999888876532     22 3899999976432                112


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|++.+.+++.++.+   +|++++.|.||.|..+........  ......+.+..|+         .-+...+
T Consensus       145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~--~~~~~~~~~~~pl---------~R~~~pe  213 (244)
T d1pr9a_         145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--PHKAKTMLNRIPL---------GKFAEVE  213 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS--HHHHHHHHTTCTT---------CSCBCHH
T ss_pred             chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC--hHHHHHHHhcCCC---------CCCcCHH
Confidence            2367999999999999999876   489999999999976531111111  2233444443332         2367789


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+|++++.
T Consensus       214 evA~~v~f  221 (244)
T d1pr9a_         214 HVVNAILF  221 (244)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988754

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.83  E-value=4.3e-21  Score=169.12  Aligned_cols=164  Identities=15%  Similarity=0.122  Sum_probs=125.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.+...+.........++..+.+|+.++.            +.+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999975433322222223457889999998752            347


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC--CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      +|++|||||......    ..++|++.+++|+.++.++.+++..    .+  .++|++||...+.               
T Consensus        83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~---------------  147 (251)
T d1zk4a1          83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV---------------  147 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS---------------
T ss_pred             ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec---------------
Confidence            999999999865443    2235788999999999999887643    33  3789999966431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                       +......|+.+|++.+.+.+.++.+     +|++++.|.||.|-.+
T Consensus       148 -~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~  193 (251)
T d1zk4a1         148 -GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTP  193 (251)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCH
T ss_pred             -cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCCh
Confidence             1112268999999999999988754     4899999999999654

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.83  E-value=2.5e-20  Score=164.79  Aligned_cols=202  Identities=16%  Similarity=0.157  Sum_probs=141.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---cccccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+...+.   +.......++..+.+|+.++.            
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999975433221   112223456788899997752            


Q ss_pred             cCCCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|++|||||......     ..++|++.+++|+.++.++.+++..    .+ .++|++||...+-            
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------  148 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR------------  148 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS------------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc------------
Confidence            347999999999754322     2345889999999999999887632    23 4899999966431            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCC----CCccHHHHHHHHHHhCCCeEEecC
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCI----DDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                          +......|+.+|++.+.+++.++.+   +||+++.|.||.|..+....    ........+...+.+..++     
T Consensus       149 ----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl-----  219 (258)
T d1iy8a_         149 ----GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-----  219 (258)
T ss_dssp             ----BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-----
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC-----
Confidence                1122368999999999999999876   48999999999996542100    0000112233333333332     


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                          .-+...+|+|++++.
T Consensus       220 ----~R~~~p~dvA~~v~f  234 (258)
T d1iy8a_         220 ----KRYGEAPEIAAVVAF  234 (258)
T ss_dssp             ----CSCBCHHHHHHHHHH
T ss_pred             ----CCCcCHHHHHHHHHH
Confidence                236678999988754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=1.3e-20  Score=165.55  Aligned_cols=159  Identities=18%  Similarity=0.165  Sum_probs=123.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      .+++|++|||||+++||.++++.|+++|++|++++|+.+..  ...+.   ....++.+|+.++            .+.+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~--~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK--EVAEA---IGGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH--HHHHH---HTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHH---cCCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999999999975432  12122   2446778898774            2347


Q ss_pred             CCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      +|++|||||...+...    .++|++.+++|+.++.++.+++.    +.+. ++|++||...+.                
T Consensus        77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~----------------  140 (248)
T d2d1ya1          77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------------  140 (248)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------
T ss_pred             CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc----------------
Confidence            9999999997654432    23588899999999999988874    3343 899999976431                


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+
T Consensus       141 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  184 (248)
T d2d1ya1         141 AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE  184 (248)
T ss_dssp             BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence            1122368999999999999999876   4899999999998554

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.9e-20  Score=164.78  Aligned_cols=199  Identities=18%  Similarity=0.164  Sum_probs=140.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      .++++|++|||||+++||+++++.|+++|++|++++|+.+...+ +.+.+  .+...+.+|+.++            .+.
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~-~~~~~--~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA-LEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHhc--CCCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            36789999999999999999999999999999999996543322 22222  3567888998774            234


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||......     ..++|++.+++|+.++.++++++.    +.+.++|++||......              
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~--------------  144 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG--------------  144 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC--------------
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc--------------
Confidence            7999999999653222     223588999999999999888763    33458999999664311              


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCC---CCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCI---DDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                        ......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+....   .... ....+.......|+         
T Consensus       145 --~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~-~~~~~~~~~~~~pl---------  212 (250)
T d1ydea1         145 --QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPD-PRASIREGMLAQPL---------  212 (250)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSS-HHHHHHHHHHTSTT---------
T ss_pred             --ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCC-HHHHHHHHHhcCCC---------
Confidence              112268999999999999999876   48999999999985531100   0000 11223333333332         


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      .-+...+|++++++.
T Consensus       213 ~R~g~p~eva~~v~f  227 (250)
T d1ydea1         213 GRMGQPAEVGAAAVF  227 (250)
T ss_dssp             SSCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHH
Confidence            236778999988764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.83  E-value=1.1e-20  Score=166.98  Aligned_cols=164  Identities=17%  Similarity=0.171  Sum_probs=126.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------cC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      |++++|+++||||+++||+++++.|+++|++|++++|+.+...+... .+ ..++..+.+|+.++.            +.
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~-~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAA-EI-GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hh-CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999997543332222 22 346788899997752            34


Q ss_pred             CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......    ..++++..+++|+.++..+.+++.    +.+  .++|++||...+-              
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--------------  144 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR--------------  144 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------------
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc--------------
Confidence            7999999999765443    224588999999999999887642    222  3899999976431              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        +......|+.+|++.+.+++.++.+   +|++++.|.||.+-.+.
T Consensus       145 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~  189 (256)
T d1k2wa_         145 --GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH  189 (256)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred             --ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence              1122368999999999999999876   48999999999987764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.83  E-value=1.7e-20  Score=166.14  Aligned_cols=164  Identities=16%  Similarity=0.053  Sum_probs=124.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc---cCCCceEEeeCcccccc------------c
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH---FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++|++|||||+++||++++++|+++|++|++++|+.....+.....   ....++..+.+|+.++.            +
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            47889999999999999999999999999999999754332222211   12346788899997742            3


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|++|||||......    ..+++++.+++|+.++.++++++    ++.+. ++|++||.....              
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--------------  147 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------  147 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee--------------
Confidence            46999999999765443    22458899999999998887776    34443 899999976431              


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                        +......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+.
T Consensus       148 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~  192 (260)
T d1x1ta1         148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL  192 (260)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred             --ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChh
Confidence              1122367999999999999999876   48999999999986653

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.83  E-value=1e-19  Score=161.81  Aligned_cols=204  Identities=16%  Similarity=0.143  Sum_probs=140.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      ++++|++|||||+++||.+++++|+++|++|++++|+.+...+...+.-....+.++.+|+.++            .+.+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999999997544332222222334577888999774            2347


Q ss_pred             CCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      +|++|||||......      ..++++..+++|+.++..+.+++..    .+. ++|++||...+...            
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~------------  150 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG------------  150 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC------------
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc------------
Confidence            999999999754331      2235888999999999998887643    343 89999986543110            


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEc
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRS  326 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  326 (340)
                         ......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+........- .............       ...-
T Consensus       151 ---~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~-------~~gr  219 (268)
T d2bgka1         151 ---EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD-SSRVEELAHQAAN-------LKGT  219 (268)
T ss_dssp             ---TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC-HHHHHHHHHHTCS-------SCSC
T ss_pred             ---cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC-HHHHHHHHHhccc-------cCCC
Confidence               011136999999999999999876   4899999999999877532111111 1112222211111       1112


Q ss_pred             cccHHHHHHHHHh
Q 019470          327 FQFVSDLVRLTET  339 (340)
Q Consensus       327 ~v~v~Dva~a~~~  339 (340)
                      +...+|+|++++.
T Consensus       220 ~~~pedvA~~v~f  232 (268)
T d2bgka1         220 LLRAEDVADAVAY  232 (268)
T ss_dssp             CCCHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH
Confidence            6678999998764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.83  E-value=3.5e-20  Score=163.94  Aligned_cols=203  Identities=12%  Similarity=0.046  Sum_probs=143.2

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      +++++|++|||||+++||++++++|+++|++|++.+|+.+...+...+. -...++..+.+|+.++.            +
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999754433222211 12356778889987641            2


Q ss_pred             C-CCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 L-EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 ~-~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      . .+|++|||||......    ..+++++.+++|+.++.++.+++.    +.+. ++|++||.....             
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------  150 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL-------------  150 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS-------------
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc-------------
Confidence            3 5899999999765443    223588899999999999888764    3333 899999965431             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCC-CccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                         +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+..... ...-....+..+.+..++.        
T Consensus       151 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~--------  219 (259)
T d2ae2a_         151 ---AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR--------  219 (259)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC--------
T ss_pred             ---ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC--------
Confidence               1122368999999999999999876   489999999999965421100 0111123344444444332        


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                       -+...+|+|++++.
T Consensus       220 -R~g~pedvA~~v~f  233 (259)
T d2ae2a_         220 -RMGEPKELAAMVAF  233 (259)
T ss_dssp             -SCBCHHHHHHHHHH
T ss_pred             -CCcCHHHHHHHHHH
Confidence             25668899988754

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.83  E-value=2e-20  Score=165.60  Aligned_cols=166  Identities=15%  Similarity=0.080  Sum_probs=118.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .++++|++|||||+++||.+++++|+++|++|++++|+.+...+...+. ....++..+.+|+.++.            +
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            3678999999999999999999999999999999999754433222111 12346888889987641            2


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       ..+|++|||||......    ..++++..+++|+.++..+.+++.    +.+ .++|++||.....             
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-------------  150 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-------------  150 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-------------
Confidence             24899999999765433    234588999999999999888763    334 4999999965331             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+.
T Consensus       151 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~  195 (259)
T d1xq1a_         151 ---SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL  195 (259)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred             ---cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence               1122368999999999999999876   48999999999997653

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=2.8e-20  Score=163.82  Aligned_cols=199  Identities=18%  Similarity=0.095  Sum_probs=141.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------c
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------~  178 (340)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+...+...+.  ....++..+.+|+.++.            +
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999754433222111  11346788899997752            3


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cC-CeEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      .++|++|||||......    ..++|++.+++|+.++.++.+++..    .+ .++|+++|......             
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~-------------  148 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-------------  148 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc-------------
Confidence            47999999999764433    2346888999999999999887643    33 38999998643210             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHH--HHHHHHHHhCCCeEEecCCcee
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVV--SNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                        +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+...    ...  ......+.+..++..       
T Consensus       149 --~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~----~~~~~~~~~~~~~~~~pl~R-------  215 (251)
T d1vl8a_         149 --TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE----AVFSDPEKLDYMLKRIPLGR-------  215 (251)
T ss_dssp             --CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH----HHHTCHHHHHHHHHTCTTSS-------
T ss_pred             --cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH----hccCCHHHHHHHHhcCCCCC-------
Confidence              1111257999999999999999876   4899999999999776421    111  223444555444322       


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                        +...+|+|++++.
T Consensus       216 --~~~pedvA~~v~f  228 (251)
T d1vl8a_         216 --TGVPEDLKGVAVF  228 (251)
T ss_dssp             --CBCGGGGHHHHHH
T ss_pred             --CCCHHHHHHHHHH
Confidence              4456777777653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.82  E-value=1.2e-19  Score=160.45  Aligned_cols=200  Identities=14%  Similarity=0.055  Sum_probs=140.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLEV  181 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~~  181 (340)
                      .+|++|||||+++||.+++++|+++|++|++.+|+.+...+...+. ....++..+.+|+.++.            +.++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999754332211111 12346888999997752            3469


Q ss_pred             CEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH------cC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          182 DQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR------VG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       182 D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~------~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      |++|||||......    ..+++++.+++|+.++.++++++..      .+ .++|++||...+.               
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~---------------  145 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ---------------  145 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS---------------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc---------------
Confidence            99999999765443    2335889999999999999998754      23 3799999866431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCC-------CCccHHHHHHHHHHhCCCeEEecC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCI-------DDGRVVSNFVAQALRKEPLTVYGD  320 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~  320 (340)
                       +......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+....       ......+.....+.+..|+.    
T Consensus       146 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg----  220 (257)
T d2rhca1         146 -GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG----  220 (257)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS----
T ss_pred             -ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC----
Confidence             1122367999999999999999987   48999999999985542100       00001123333444433322    


Q ss_pred             CceeEccccHHHHHHHHHh
Q 019470          321 GKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       321 g~~~~~~v~v~Dva~a~~~  339 (340)
                           -+...+|++++++.
T Consensus       221 -----R~~~pedia~~v~f  234 (257)
T d2rhca1         221 -----RYVQPSEVAEMVAY  234 (257)
T ss_dssp             -----SCBCHHHHHHHHHH
T ss_pred             -----CCcCHHHHHHHHHH
Confidence                 26678999988764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.82  E-value=1.5e-19  Score=159.82  Aligned_cols=203  Identities=14%  Similarity=0.084  Sum_probs=141.4

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc-ccCCCceEEeeCcccccc------------c
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HFGNPNFELIRHDVVEPL------------L  178 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~------------~  178 (340)
                      .++++|++|||||++.||++++++|+++|++|++++|+++...+.... ......+..+.+|+.++.            +
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            367899999999999999999999999999999999975433222211 112356778889987642            2


Q ss_pred             -CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCC
Q 019470          179 -LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       179 -~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       ..+|++|||||......    ..+++.+.+++|+.++..+.+++..    .+. ++|++||.....             
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~-------------  148 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS-------------  148 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS-------------
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc-------------
Confidence             24899999999765433    2336889999999999999887643    233 899999976532             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCC--CCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCI--DDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                         +......|+.+|.+.+.+++.++.+   +|+++++|.||.|..+....  ............+.+..++        
T Consensus       149 ---~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl--------  217 (258)
T d1ae1a_         149 ---ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM--------  217 (258)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT--------
T ss_pred             ---ccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC--------
Confidence               1122368999999999999999876   48999999999998764211  0111112344444443333        


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                       .-+...+|+|.+++.
T Consensus       218 -gR~~~pediA~~v~f  232 (258)
T d1ae1a_         218 -GRAGKPQEVSALIAF  232 (258)
T ss_dssp             -CSCBCHHHHHHHHHH
T ss_pred             -CCCcCHHHHHHHHHH
Confidence             226788999998754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.81  E-value=1.1e-20  Score=166.70  Aligned_cols=162  Identities=20%  Similarity=0.193  Sum_probs=123.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      ++++|+++||||+++||++++++|+++|++|++.+|+.+...+ +...+ ..+...+.+|+.++            .+.+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-LAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHh-CCCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999986543322 22222 24567788888764            2347


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcccccCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSEVYGDPLQHPQKETYWGNVNP  252 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~  252 (340)
                      +|++|||||......    ..++|++.+++|+.++.++.+++..    .+.++|++||.....                +
T Consensus        81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~----------------~  144 (253)
T d1hxha_          81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----------------P  144 (253)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------C
T ss_pred             CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc----------------C
Confidence            999999999765433    2345889999999999988887643    234899999966431                1


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          253 IGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       253 ~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                      ......|+.+|++.+.+++.++.+     ++++++.|.||.|..+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~  189 (253)
T d1hxha_         145 IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP  189 (253)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred             ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence            122368999999999999988765     3599999999998654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=1.7e-19  Score=157.11  Aligned_cols=190  Identities=13%  Similarity=0.079  Sum_probs=134.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~  187 (340)
                      +++|++|||||+++||++++++|+++|++|++++|+.+.    +.+    ...+++.+|+.+.      .+.++|++|||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~----l~~----~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKR----SGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHH----TCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHh----cCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            578999999999999999999999999999999986422    111    2334566776552      35679999999


Q ss_pred             ccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCCh
Q 019470          188 ACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSC  258 (340)
Q Consensus       188 Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  258 (340)
                      ||......    ..+++++.+++|+.++..+.+++    ++.+. ++|+++|.....                +......
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~----------------~~~~~~~  137 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----------------PIENLYT  137 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------CCTTBHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc----------------ccccccc
Confidence            99754433    23357889999999988888776    33443 899999976432                2222368


Q ss_pred             HHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHH
Q 019470          259 YDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVR  335 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~  335 (340)
                      |+.+|++.+.+++.++.+   +|+++++|.||.+-.+....   ..-+.....+.+..++         .-+...+|+++
T Consensus       138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~~pl---------~R~~~pediA~  205 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLSEEKKKQVESQIPM---------RRMAKPEEIAS  205 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSCHHHHHHHHTTSTT---------SSCBCHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhh---hcCHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            999999999999999876   48999999999997764210   0011222333333332         23677899998


Q ss_pred             HHHh
Q 019470          336 LTET  339 (340)
Q Consensus       336 a~~~  339 (340)
                      +++.
T Consensus       206 ~v~f  209 (234)
T d1o5ia_         206 VVAF  209 (234)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.81  E-value=9.9e-20  Score=161.14  Aligned_cols=164  Identities=16%  Similarity=0.091  Sum_probs=124.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.+...+..... ....++..+.+|+.++.            +.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999999754332211111 12346788899997742            34


Q ss_pred             CCCEEEEcccCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGN  249 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~  249 (340)
                      ++|++|||||......     ..++|+..+++|+.++.++.+++..    .+. ++|++||...+..             
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-------------  148 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-------------  148 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-------------
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-------------
Confidence            7999999999754322     2335888999999999998887632    333 8999999664421             


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          250 VNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       250 ~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                         ......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+
T Consensus       149 ---~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         149 ---PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence               112268999999999999999876   4899999999999665

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.81  E-value=7.4e-20  Score=160.43  Aligned_cols=193  Identities=16%  Similarity=0.049  Sum_probs=137.6

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCccccc------------ccCCCCE
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEP------------LLLEVDQ  183 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~~~~D~  183 (340)
                      .||||||+++||++++++|+++|++|++.+++.+...+.+.+.+  ...++..+.+|+.++            .+.++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            79999999999999999999999999987765433322222211  234678889999775            2347999


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      +|||||......    ..++|++.+++|+.++.++.+++.    +.+ .++|++||...+-                +..
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------------~~~  146 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----------------GNI  146 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------CCT
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC----------------CCC
Confidence            999999765443    234688999999999999888763    334 3999999966431                111


Q ss_pred             CCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHH
Q 019470          255 VRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVS  331 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  331 (340)
                      ....|+.+|.+.+.+++.++.+   +|+++++|.||.|-.+..    ..+...+...+.+..++.         -+...+
T Consensus       147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~----~~~~~~~~~~~~~~~pl~---------R~~~p~  213 (244)
T d1edoa_         147 GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT----AKLGEDMEKKILGTIPLG---------RTGQPE  213 (244)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH----HTTCHHHHHHHHTSCTTC---------SCBCHH
T ss_pred             CCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH----HHhhHHHHHHHHhcCCCC---------CCcCHH
Confidence            2268999999999999999876   489999999999865421    111233444444443332         266789


Q ss_pred             HHHHHHHh
Q 019470          332 DLVRLTET  339 (340)
Q Consensus       332 Dva~a~~~  339 (340)
                      |+|++++.
T Consensus       214 dvA~~v~f  221 (244)
T d1edoa_         214 NVAGLVEF  221 (244)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99988753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.81  E-value=1.6e-19  Score=160.22  Aligned_cols=165  Identities=13%  Similarity=0.053  Sum_probs=119.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc---c-cCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---H-FGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~-~~~~~~~~~~~D~~~~~-----------  177 (340)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+...+...+   . ....++..+.+|+.++.           
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999975433221111   1 12346888999997752           


Q ss_pred             -cCCCCEEEEcccCCCCCC--------CcCChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeCcc-cccCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKR----VGARFLLTSTSE-VYGDPLQHPQK  243 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~--------~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS~~-v~g~~~~~~~~  243 (340)
                       +.++|++|||||......        ..++|+..+++|+.++.++.+++..    .+..+|+++|+. ..         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~---------  152 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL---------  152 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS---------
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc---------
Confidence             347999999999753221        2235888999999999888887643    334666666643 22         


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                             .+......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+.
T Consensus       153 -------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~  198 (264)
T d1spxa_         153 -------HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF  198 (264)
T ss_dssp             -------SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred             -------ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence                   11112257999999999999999876   48999999999997653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.3e-20  Score=164.60  Aligned_cols=164  Identities=14%  Similarity=0.115  Sum_probs=125.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccc---ccccc---cCCCceEEeeCcccccc---------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKE---NVMHH---FGNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~---~~~~~---~~~~~~~~~~~D~~~~~---------  177 (340)
                      .+++|++|||||+++||.+++++|+++|++|++++|+.+...+   .+...   ....++..+.+|+.++.         
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999999997543322   11111   12357888999997752         


Q ss_pred             ---cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHc----C-CeEEEEeCcccccCCCCCCCCCC
Q 019470          178 ---LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 ---~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~----~-~~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                         +.++|++|||||......    ..++++..+++|+.++..+++++...    + ..+|++|+....+.         
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~---------  159 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---------  159 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC---------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc---------
Confidence               347999999999755443    22458889999999999998887533    2 36787776543221         


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                              .....|+.+|++.+.+++.++.+   +|+++++|.||.|..+.
T Consensus       160 --------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~  202 (297)
T d1yxma1         160 --------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  202 (297)
T ss_dssp             --------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             --------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence                    11267999999999999999876   48999999999997764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=1.9e-19  Score=155.78  Aligned_cols=191  Identities=14%  Similarity=0.084  Sum_probs=125.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCe--EEEEeCCCCCcccccccccCCCceEEeeCccccc-----ccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDS--VIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----LLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~--V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~D~Vih~  187 (340)
                      ++++|||||||||||+++++.|+++|++  |+++.|++.....      ...+++++.+|..+.     .+.++|+|||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK------IGGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH------TTCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh------ccCCcEEEEeeeccccccccccccceeeEEE
Confidence            4679999999999999999999999975  5566664322111      123566777777553     56789999999


Q ss_pred             ccCCCCCC-------------CcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          188 ACPASPVH-------------YKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       188 Ag~~~~~~-------------~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      |+......             ..........+|+.++.++++.+..... .+.+.|+...+.....           ...
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----------~~~  144 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----------LNK  144 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----------GGG
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----------ccc
Confidence            98643211             1123556778999999999999998886 7888887665432111           011


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      .....|...+...+    .+..+.+++++++||+.+||+......  .        +.+....   -.....+++|++|+
T Consensus       145 ~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~~--~--------~~~~~~~---~~~~~~~~i~~~Dv  207 (252)
T d2q46a1         145 LGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVRE--L--------LVGKDDE---LLQTDTKTVPRADV  207 (252)
T ss_dssp             GGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSSC--E--------EEESTTG---GGGSSCCEEEHHHH
T ss_pred             ccccchhhhhhhhh----hhhhcccccceeecceEEECCCcchhh--h--------hhccCcc---cccCCCCeEEHHHH
Confidence            11234555555444    344667999999999999998642100  0        0011000   11334579999999


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |++++.
T Consensus       208 a~a~~~  213 (252)
T d2q46a1         208 AEVCIQ  213 (252)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999865

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.80  E-value=4.9e-19  Score=156.18  Aligned_cols=160  Identities=19%  Similarity=0.085  Sum_probs=120.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCccccc------------ccCCCCE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEP------------LLLEVDQ  183 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~~~D~  183 (340)
                      |.+|||||+++||++++++|+++|++|++.+|+.+...+...+. ....++..+.+|+.++            .+.++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            45799999999999999999999999999999754332221111 1234678889999775            2347999


Q ss_pred             EEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC--CeEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          184 IYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       184 Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|||||......    ..++|++.+++|+.++.++++++.    +.+  .+++++||...+.                +.
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------~~  145 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------------GN  145 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------CC
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc----------------cC
Confidence            999999765433    234588899999999999988763    333  3799999966431                11


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      .....|+.+|++.+.+++.++.+   +|++++.|.||.|-.+
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  187 (255)
T d1gega_         146 PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP  187 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred             cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence            22367999999999999999876   4899999999998554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=1.9e-19  Score=158.89  Aligned_cols=200  Identities=13%  Similarity=0.006  Sum_probs=135.8

Q ss_pred             CCCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------cc
Q 019470          113 KRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LL  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~  178 (340)
                      ++++|++|||||+|  +||++++++|+++|++|++.+|++....+.............+.+|+.++            .+
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence            67899999999987  89999999999999999998886433222111111223567788888764            23


Q ss_pred             CCCCEEEEcccCCCCC--------CCcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      .++|++|||||.....        ...++++..+++|+.++..+++++...-   .++|++||.....            
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~------------  152 (256)
T d1ulua_          85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------------  152 (256)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS------------
T ss_pred             CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC------------
Confidence            4699999999864211        1223467789999999999998876442   3799999966431            


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                          +......|+.+|++.+.+++.++.+   +|+++++|.||.|..+....  ......+...+.+..++.        
T Consensus       153 ----~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~--~~~~~~~~~~~~~~~pl~--------  218 (256)
T d1ulua_         153 ----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS--IPGFTKMYDRVAQTAPLR--------  218 (256)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------CHHHHHHHHHHSTTS--------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccc--hhhhHHHHHHHHhcCCCC--------
Confidence                1122368999999999999999876   48999999999997764311  111133444444433332        


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                       -+...+|+|++++.
T Consensus       219 -R~~~pedvA~~v~f  232 (256)
T d1ulua_         219 -RNITQEEVGNLGLF  232 (256)
T ss_dssp             -SCCCHHHHHHHHHH
T ss_pred             -CCcCHHHHHHHHHH
Confidence             25668899988754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.79  E-value=2.2e-19  Score=158.92  Aligned_cols=205  Identities=15%  Similarity=0.060  Sum_probs=140.7

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------  177 (340)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+...+...+..  ...++..+.+|+.++.            
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998665433222111  1346788999997752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----c-CC-eEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----V-GA-RFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~-~~-~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      +.++|++|||||......    ..+++++.+++|+.++.++.+++..    . +. .++.++|...........      
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~------  158 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL------  158 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET------
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc------
Confidence            346999999999765443    2235888999999999988876532    2 23 566666655432111000      


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                         .+......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+....    ....+...+.+..++..       
T Consensus       159 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~----~~~~~~~~~~~~~pl~R-------  224 (260)
T d1h5qa_         159 ---NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH----MDKKIRDHQASNIPLNR-------  224 (260)
T ss_dssp             ---TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SCHHHHHHHHHTCTTSS-------
T ss_pred             ---ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc----cCHHHHHHHHhcCCCCC-------
Confidence               01112257999999999999999875   48999999999997654221    12334444555444332       


Q ss_pred             EccccHHHHHHHHH
Q 019470          325 RSFQFVSDLVRLTE  338 (340)
Q Consensus       325 ~~~v~v~Dva~a~~  338 (340)
                        +...+|+|++++
T Consensus       225 --~g~pedvA~~v~  236 (260)
T d1h5qa_         225 --FAQPEEMTGQAI  236 (260)
T ss_dssp             --CBCGGGGHHHHH
T ss_pred             --CcCHHHHHHHHH
Confidence              445667777654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=3.8e-19  Score=158.56  Aligned_cols=164  Identities=15%  Similarity=0.051  Sum_probs=122.0

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccc---cc-cCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVM---HH-FGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~---~~-~~~~~~~~~~~D~~~~~-----------  177 (340)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+...+...   .. ....++..+.+|+.++.           
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999997543222111   11 12346888999997752           


Q ss_pred             -cCCCCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +.++|++|||||......      ..++|+..+++|+.++..+.+++..    .+. .++++||.....          
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~----------  150 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ----------  150 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS----------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc----------
Confidence             346999999999643221      1234788999999999988887743    333 677777754321          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            +......|+.+|.+.+.+++.++.+   +|++++.|.||.|-.+
T Consensus       151 ------~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~  194 (274)
T d1xhla_         151 ------AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG  194 (274)
T ss_dssp             ------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred             ------cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence                  1112257999999999999999876   4899999999999765

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.79  E-value=1.1e-18  Score=153.79  Aligned_cols=161  Identities=17%  Similarity=0.117  Sum_probs=125.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc--cccccCCCceEEeeCccccc-------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN--VMHHFGNPNFELIRHDVVEP-------------  176 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~-------------  176 (340)
                      +++++|+||||||+++||.+++++|+++|++|++++|..+.....  +.......++.++.+|+...             
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999998875543211  22233445788888888632             


Q ss_pred             ccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc------C--CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          177 LLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV------G--ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       177 ~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~------~--~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      .+.++|++|||||..    ..+++++++++|+.|+.++.+++...      +  .++|++||...+.             
T Consensus        81 ~~g~iDilvnnAG~~----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~-------------  143 (254)
T d1sbya1          81 QLKTVDILINGAGIL----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN-------------  143 (254)
T ss_dssp             HHSCCCEEEECCCCC----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS-------------
T ss_pred             HcCCCCEEEeCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc-------------
Confidence            124699999999953    35678999999999999998877431      1  2799999976541             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                         +......|+.+|++...+++.++.+   +|++++.|.||.|..+
T Consensus       144 ---~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~  187 (254)
T d1sbya1         144 ---AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP  187 (254)
T ss_dssp             ---CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence               2222368999999999999999875   4999999999999865

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=1.3e-18  Score=154.85  Aligned_cols=164  Identities=15%  Similarity=0.074  Sum_probs=121.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc---c-cCCCceEEeeCcccccc-----------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---H-FGNPNFELIRHDVVEPL-----------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~-~~~~~~~~~~~D~~~~~-----------  177 (340)
                      ++++|++|||||+++||++++++|+++|++|++++|+.+...+...+   . ....++..+.+|+.++.           
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999975433221111   1 12346888999997752           


Q ss_pred             -cCCCCEEEEcccCCCCCCC-----cC---ChhhHHHHHHHHHHHHHHHHHH----cCCeEEEEeC-cccccCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVHY-----KF---NPVKTIKTNVVGTLNMLGLAKR----VGARFLLTST-SEVYGDPLQHPQK  243 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~~-----~~---~~~~~~~~Nv~g~~~ll~~a~~----~~~~~i~~SS-~~v~g~~~~~~~~  243 (340)
                       +.++|++|||||...+...     +.   +|++.+++|+.++.++.+++..    .+..+|+++| .+..         
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~---------  152 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP---------  152 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS---------
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc---------
Confidence             3479999999997654321     11   3788999999999998887643    3345665555 3322         


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          244 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       244 E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                             .+......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+
T Consensus       153 -------~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  197 (272)
T d1xkqa_         153 -------QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  197 (272)
T ss_dssp             -------SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             -------cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence                   11122267999999999999999876   4899999999999665

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.79  E-value=3.1e-19  Score=156.16  Aligned_cols=195  Identities=20%  Similarity=0.146  Sum_probs=140.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      .+++|++|||||+++||..++++|+++|++|++.+|+.+...+... .+ ..++..+.+|+.++            .+.+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-AL-EAEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TC-CSSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hc-CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4688999999999999999999999999999999997654332222 22 24677888998765            2346


Q ss_pred             CCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcCC---eEEEEeCcccccCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNVNPI  253 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~~---~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~  253 (340)
                      +|++|||||......    ..++++..+++|+.+..++.+++...-.   .++++||.+....                 
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-----------------  142 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-----------------  142 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-----------------
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-----------------
Confidence            999999999765433    2235788999999999999998866532   3445554432211                 


Q ss_pred             CCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          254 GVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       254 ~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      .....|+.+|++.|.+++.++++.   |+++++|.||.|-.+..    ..+.+.....+.+..++.         -+...
T Consensus       143 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~----~~~~~~~~~~~~~~~p~~---------r~~~p  209 (241)
T d2a4ka1         143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMT----AGLPPWAWEQEVGASPLG---------RAGRP  209 (241)
T ss_dssp             HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGG----TTSCHHHHHHHHHTSTTC---------SCBCH
T ss_pred             cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHH----HhhhHhHHHHHHhCCCCC---------CCcCH
Confidence            112579999999999999999874   79999999999965432    112234455555544432         26678


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|+|++++.
T Consensus       210 ~dva~~v~f  218 (241)
T d2a4ka1         210 EEVAQAALF  218 (241)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.79  E-value=2.5e-19  Score=159.87  Aligned_cols=163  Identities=21%  Similarity=0.160  Sum_probs=122.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccC
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      |++++|++|||||+++||++++++|+++|++|++++|+.+...+... .+ ..++..+.+|+.++            .+.
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~-~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELET-DH-GDNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HH-GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-Hc-CCCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999999997543322221 11 24678888888764            234


Q ss_pred             CCCEEEEcccCCCCCCC-----c----CChhhHHHHHHHHHHHHHHHH----HHcCCeEEEEeCcccccCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHY-----K----FNPVKTIKTNVVGTLNMLGLA----KRVGARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~-----~----~~~~~~~~~Nv~g~~~ll~~a----~~~~~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      ++|++|||||.......     .    +.|++.+++|+.++.++++++    ++.+.++|+++|...+-           
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~-----------  147 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY-----------  147 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-----------
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc-----------
Confidence            79999999997533221     1    137889999999998888776    34445888888865321           


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh--CCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~--gi~~~ivRp~~i~G~  292 (340)
                           +......|+.+|++.+.+++.++.+.  +++++.|.||.|-.+
T Consensus       148 -----~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~  190 (276)
T d1bdba_         148 -----PNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSD  190 (276)
T ss_dssp             -----TTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSC
T ss_pred             -----CCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecC
Confidence                 11122579999999999999998764  599999999998665

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=9.2e-19  Score=153.45  Aligned_cols=199  Identities=15%  Similarity=0.070  Sum_probs=138.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc--------ccCCCCEE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------LLLEVDQI  184 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~~D~V  184 (340)
                      ++++|++|||||++.||+++++.|+++|++|++++|+++...+    ......++....|+...        .+.++|++
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~l   78 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE----LEKYPGIQTRVLDVTKKKQIDQFANEVERLDVL   78 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG----GGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHhccCCceeeeeccccccccccccccccceeE
Confidence            3789999999999999999999999999999999996533222    22234455666665443        24579999


Q ss_pred             EEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCC
Q 019470          185 YHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGV  255 (340)
Q Consensus       185 ih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~  255 (340)
                      |||||......    ..++++..+++|+.++..+.+++..    .+. ++|++||....-               .+...
T Consensus        79 Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------------~~~~~  143 (245)
T d2ag5a1          79 FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---------------KGVVN  143 (245)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---------------BCCTT
T ss_pred             EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---------------CCccc
Confidence            99999766543    2335889999999999999887643    333 899999854210               11223


Q ss_pred             CChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCC--CccHHHHHHHHHHhCCCeEEecCCceeEccccH
Q 019470          256 RSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFV  330 (340)
Q Consensus       256 ~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  330 (340)
                      ...|+.+|++.+.+++.++.+   +|+++++|.||.|-.+.....  .......+...+.+..++.         -+...
T Consensus       144 ~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~p  214 (245)
T d2ag5a1         144 RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG---------RFATA  214 (245)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS---------SCEEH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC---------CCcCH
Confidence            368999999999999999876   489999999999977532100  0011122334444443322         26677


Q ss_pred             HHHHHHHHh
Q 019470          331 SDLVRLTET  339 (340)
Q Consensus       331 ~Dva~a~~~  339 (340)
                      +|+++++..
T Consensus       215 edva~~v~f  223 (245)
T d2ag5a1         215 EEIAMLCVY  223 (245)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            899888754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=5e-19  Score=154.93  Aligned_cols=164  Identities=12%  Similarity=0.005  Sum_probs=125.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-cCCCceEEeeCccccc------------ccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      +..||+++||||+++||++++++|+++|++|++++|+.+...+...+. ....++..+.+|++++            .+.
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999754332221111 1234688889999775            234


Q ss_pred             CCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHH----HHcCC-eEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLA----KRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a----~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      ++|++|||||........    +.+++++++|+.|+.++++++    ++.+. ++|++||...+.               
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~---------------  148 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV---------------  148 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC---------------
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC---------------
Confidence            699999999986544432    247789999999999888766    34444 899999976431               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh------hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG------AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~------~gi~~~ivRp~~i~G~  292 (340)
                       +......|+.||++.+.+.+.++.+      .|++++++.||+|-.+
T Consensus       149 -~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~  195 (244)
T d1yb1a_         149 -SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG  195 (244)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence             1122267999999999999999865      3799999999988654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=8e-19  Score=154.94  Aligned_cols=166  Identities=16%  Similarity=0.057  Sum_probs=124.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---cccccCCCceEEeeCcccccc------------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------  177 (340)
                      ++++|++|||||+++||.++++.|+++|++|++.+|+.....+.   +.......++..+.+|+.++.            
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999875432221   111112347888899998752            


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHH----HHcC---CeEEEEeCcccccCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLA----KRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~---~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      +.++|++|||||......    ..++++..+++|+.+..++.+++    ++.+   .++|++||.+.+..          
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----------  156 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV----------  156 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC----------
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC----------
Confidence            347999999999765433    23458889999999998887765    3333   38999999764311          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                          .|......|+.+|++.+.+++.++.+     +++++++|.||.+-.+
T Consensus       157 ----~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~  203 (257)
T d1xg5a_         157 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ  203 (257)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred             ----CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh
Confidence                11122256999999999999988854     4899999999988554

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=1.7e-18  Score=152.96  Aligned_cols=202  Identities=18%  Similarity=0.117  Sum_probs=140.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCccccc------------cc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEP------------LL  178 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~------------~~  178 (340)
                      +++||++|||||+++||.+++++|+++|++|++.++..+...+.....+  ...++..+.+|+.++            ..
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999987775444333222222  234678899999774            23


Q ss_pred             CCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCc-ccccCCCCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTS-EVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~-~v~g~~~~~~~~E~~~~~~  250 (340)
                      .++|++|||||......    ..+.++..+++|+.+..++++++...=   .++++++|. +...               
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~---------------  147 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT---------------  147 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC---------------
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc---------------
Confidence            46999999999765443    223578899999999999999886542   256666664 3221               


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCC---------CCCCccHHHHHHHHHHhCCCeEEe
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRM---------CIDDGRVVSNFVAQALRKEPLTVY  318 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~---------~~~~~~~~~~~~~~~~~~~~~~~~  318 (340)
                       +......|+.+|++.+.+++.++.+   +|+++++|.||+|-.+..         ..........+...+.+..++.  
T Consensus       148 -~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~--  224 (259)
T d1ja9a_         148 -GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK--  224 (259)
T ss_dssp             -SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS--
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC--
Confidence             1111267999999999999999876   489999999999864310         0011112233444444544332  


Q ss_pred             cCCceeEccccHHHHHHHHHh
Q 019470          319 GDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       319 ~~g~~~~~~v~v~Dva~a~~~  339 (340)
                             -+...+|++++++.
T Consensus       225 -------R~g~p~eVa~~v~f  238 (259)
T d1ja9a_         225 -------RIGYPADIGRAVSA  238 (259)
T ss_dssp             -------SCBCHHHHHHHHHH
T ss_pred             -------CCcCHHHHHHHHHH
Confidence                   36778999988764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.77  E-value=2.1e-18  Score=150.65  Aligned_cols=160  Identities=13%  Similarity=0.062  Sum_probs=120.9

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCe-------EEEEeCCCCCcccccccc-cCCCceEEeeCccccc------------c
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDS-------VIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEP------------L  177 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~-------V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~------------~  177 (340)
                      .||||||+++||++++++|+++|++       |++.+|+.+...+...+. ....++..+.+|+.++            .
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999987       888888644322211111 1234678889999875            2


Q ss_pred             cCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHH----HcC-CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~----~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                      +.++|++|||||......    ..+++++.+++|+.|+..+++++.    +.+ .++|++||...+.             
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------  149 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK-------------  149 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------------
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC-------------
Confidence            346999999999765443    234688899999999999887763    334 3899999976441             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                         +......|+.+|++.+.+.+.++.+   +|++++.|.||.|-.+.
T Consensus       150 ---~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~  194 (240)
T d2bd0a1         150 ---AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM  194 (240)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence               1122368999999999999999876   48999999999997653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.76  E-value=2e-18  Score=151.87  Aligned_cols=197  Identities=14%  Similarity=0.084  Sum_probs=133.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-------ccCCCCEEEEcccC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-------LLLEVDQIYHLACP  190 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-------~~~~~D~Vih~Ag~  190 (340)
                      ++|||||+++||+.++++|+++|++|++.+|+.+...+..........+|+.+.+..+.       .+.++|++|||||.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            78999999999999999999999999999987554322111111123455554443332       23479999999996


Q ss_pred             CCCCC-----CcCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHH
Q 019470          191 ASPVH-----YKFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       191 ~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      .....     ..+++++.+++|+.++.++++++    ++.+ .++|++||...+..                ......|+
T Consensus        82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~----------------~~~~~~Y~  145 (252)
T d1zmta1          82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP----------------WKELSTYT  145 (252)
T ss_dssp             CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC----------------CTTCHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc----------------cccccccc
Confidence            53321     22358889999999999888776    3334 48999999764321                11226799


Q ss_pred             HHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCc----cHHHHHHHHHHhCCCeEEecCCceeEccccHHHH
Q 019470          261 EGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDG----RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  333 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dv  333 (340)
                      .+|.+.+.+++.++.+   +|+++++|.||.|-.+.......    ...+.....+.+..++.         -+...+|+
T Consensus       146 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedv  216 (252)
T d1zmta1         146 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------RLGTQKEL  216 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------SCBCHHHH
T ss_pred             cccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------CCcCHHHH
Confidence            9999999999999876   48999999999997764221110    01123344444433332         25678899


Q ss_pred             HHHHHh
Q 019470          334 VRLTET  339 (340)
Q Consensus       334 a~a~~~  339 (340)
                      |++++.
T Consensus       217 A~~v~f  222 (252)
T d1zmta1         217 GELVAF  222 (252)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988753

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.9e-18  Score=150.23  Aligned_cols=158  Identities=20%  Similarity=0.194  Sum_probs=120.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccc---cccccCCCceEEeeCcccccc------------cC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEPL------------LL  179 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~------------~~  179 (340)
                      +||++|||||+++||+++++.|+++|++|++++|+.+...+.   +.+.....++..+.+|+.++.            +.
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            688999999999999999999999999999999975443222   222223457888999997752            34


Q ss_pred             CCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHH----c--C--CeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR----V--G--ARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~----~--~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      ++|++|||||...    ..++++.+++|+.++.++.+++..    .  +  .++|++||...+                .
T Consensus        82 ~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~----------------~  141 (254)
T d2gdza1          82 RLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL----------------M  141 (254)
T ss_dssp             CCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT----------------S
T ss_pred             CcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc----------------c
Confidence            7999999999643    457889999999998888777643    2  1  269999997643                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHH--HHH---hhCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMD--YHR---GAGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~--~~~---~~gi~~~ivRp~~i~G~  292 (340)
                      +......|+.+|++.+.+++.  ++.   .+|++++.|.||.|-.+
T Consensus       142 ~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~  187 (254)
T d2gdza1         142 PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA  187 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCCh
Confidence            122236799999999999885  343   35899999999998543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.75  E-value=3.5e-18  Score=154.10  Aligned_cols=163  Identities=16%  Similarity=0.120  Sum_probs=117.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc----c-c---ccccc--CCC--ceEEeeCccccc---
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK----E-N---VMHHF--GNP--NFELIRHDVVEP---  176 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~----~-~---~~~~~--~~~--~~~~~~~D~~~~---  176 (340)
                      +++++|++|||||+++||++++++|+++|++|++.++..+...    + .   ....+  ...  .+++.+.+..+.   
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            5788999999999999999999999999999999988654221    1 0   00011  011  122222222111   


Q ss_pred             ----ccCCCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCccc-ccCCCCCCC
Q 019470          177 ----LLLEVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEV-YGDPLQHPQ  242 (340)
Q Consensus       177 ----~~~~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v-~g~~~~~~~  242 (340)
                          .+.++|++|||||.......    .++++..+++|+.|+.++++++    ++.+ .+||++||... ++..     
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~-----  157 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-----  157 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC-----
Confidence                23479999999998765442    2358899999999999988876    3444 39999999653 3322     


Q ss_pred             CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeC
Q 019470          243 KETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYG  291 (340)
Q Consensus       243 ~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G  291 (340)
                                  ....|+.+|++.+.+.+.++.+   +|+++++|.||.+-.
T Consensus       158 ------------~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t  197 (302)
T d1gz6a_         158 ------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSR  197 (302)
T ss_dssp             ------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCST
T ss_pred             ------------CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCc
Confidence                        1268999999999999999876   489999999998744

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.8e-17  Score=144.04  Aligned_cols=197  Identities=19%  Similarity=0.214  Sum_probs=133.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------------ccCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------------LLLE  180 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~  180 (340)
                      .++||++|||||+++||.+++++|+++|++|++++|+.+...+...+ +. ........|..+.            ....
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK-LG-NNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH-HC-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-hC-CCccccccccccccccccccccccccccc
Confidence            47899999999999999999999999999999999986554433322 22 3445555555432            2235


Q ss_pred             CCEEEEcccCCCCCC----------CcCChhhHHHHHHHHHHHHHHHHHHc----------CC-eEEEEeCcccccCCCC
Q 019470          181 VDQIYHLACPASPVH----------YKFNPVKTIKTNVVGTLNMLGLAKRV----------GA-RFLLTSTSEVYGDPLQ  239 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~----------~~~~~~~~~~~Nv~g~~~ll~~a~~~----------~~-~~i~~SS~~v~g~~~~  239 (340)
                      .|.++++++......          ..+.+++.+++|+.++.++.+++...          +. ++|++||...+.    
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----  155 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE----  155 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH----
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc----
Confidence            788888876543221          12357789999999999999988542          22 799999976441    


Q ss_pred             CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeE
Q 019470          240 HPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLT  316 (340)
Q Consensus       240 ~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~  316 (340)
                                  +......|+.+|++.+.+++.++.+   +|+++++|.||.+..+...    .+.+.+...+.+..++ 
T Consensus       156 ------------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~----~~~~~~~~~~~~~~pl-  218 (248)
T d2o23a1         156 ------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT----SLPEKVCNFLASQVPF-  218 (248)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSS-
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh----cCCHHHHHHHHhcCCC-
Confidence                        1122367999999999999999876   4899999999999766421    1122233333333221 


Q ss_pred             EecCCceeEccccHHHHHHHHHh
Q 019470          317 VYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       317 ~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                       .      .-+...+|+|++++.
T Consensus       219 -~------~R~g~peevA~~v~f  234 (248)
T d2o23a1         219 -P------SRLGDPAEYAHLVQA  234 (248)
T ss_dssp             -S------CSCBCHHHHHHHHHH
T ss_pred             -C------CCCcCHHHHHHHHHH
Confidence             0      126678999998764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.74  E-value=2.2e-17  Score=146.84  Aligned_cols=168  Identities=17%  Similarity=0.103  Sum_probs=125.8

Q ss_pred             CCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc--CCCceEEeeCccccc-----------
Q 019470          110 LGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF--GNPNFELIRHDVVEP-----------  176 (340)
Q Consensus       110 ~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~-----------  176 (340)
                      ....+++|++|||||++.||++|+++|+++|++|++++++.+...+.....+  ....+..+.+|+.++           
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999986543322222211  234678888999774           


Q ss_pred             -ccCCCCEEEEcccCCCCCC----CcCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCC
Q 019470          177 -LLLEVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWG  248 (340)
Q Consensus       177 -~~~~~D~Vih~Ag~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~  248 (340)
                       .+.++|++|||+|......    ..+++...+++|+.++..+++++...=   .++++++|+....             
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~-------------  158 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-------------  158 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-------------
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc-------------
Confidence             2347999999999765443    223577899999999999999886542   3677777754221             


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          249 NVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       249 ~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                        .+......|+.+|++.+.+++.++.+   +|++++.|.||.|-.+
T Consensus       159 --~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~  203 (272)
T d1g0oa_         159 --KAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD  203 (272)
T ss_dssp             --SSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred             --ccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence              11122257999999999999999876   4999999999998543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.73  E-value=6.7e-17  Score=141.66  Aligned_cols=165  Identities=15%  Similarity=0.015  Sum_probs=120.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHh---CCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------------c
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------------L  178 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------------~  178 (340)
                      ||+||||||+++||.+++++|++   +|++|++.+|+.+...+.........++.++.+|+.++.              .
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            67899999999999999999974   699999999987654332111112357889999997742              1


Q ss_pred             CCCCEEEEcccCCCCCC--Cc---CChhhHHHHHHHHHHHHHHHHHH----c-----------C-CeEEEEeCcccccCC
Q 019470          179 LEVDQIYHLACPASPVH--YK---FNPVKTIKTNVVGTLNMLGLAKR----V-----------G-ARFLLTSTSEVYGDP  237 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~--~~---~~~~~~~~~Nv~g~~~ll~~a~~----~-----------~-~~~i~~SS~~v~g~~  237 (340)
                      .++|++|||||......  .+   +++++.+++|+.|+..+++++..    .           + .++|++||....  .
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~--~  159 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS--I  159 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC--S
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc--c
Confidence            35999999999754332  12   23778999999999988877632    1           2 379999995421  1


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      ..           .+......|+.||++...+++.++.+   .|++++.+.||.|-.+.
T Consensus       160 ~~-----------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         160 QG-----------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             TT-----------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             CC-----------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            11           11122357999999999999988765   48999999999997764

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.73  E-value=3.6e-17  Score=146.93  Aligned_cols=202  Identities=13%  Similarity=0.051  Sum_probs=135.3

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc--cCCCceEEeeCcccccc------------
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH--FGNPNFELIRHDVVEPL------------  177 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~------------  177 (340)
                      .++++|++|||||+|+||++++++|+++|++|++++|+.....+...+.  .....+..+.+|+.++.            
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            5789999999999999999999999999999999999754333222111  12346778889987652            


Q ss_pred             cCCCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHH----HcC-C-eEEEEeCcccccCCCCCCCCCCCC
Q 019470          178 LLEVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVG-A-RFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       178 ~~~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~----~~~-~-~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      ..++|++|||||........    .++...+.+|+.+...+...+.    ..+ . .++.++|......           
T Consensus       101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~-----------  169 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-----------  169 (294)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-----------
T ss_pred             ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc-----------
Confidence            34699999999976544322    2466778888888777765542    222 3 5777776543211           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                           ......|+.+|.+.+.+++.++.+   +|+++++|.||.|-.+...... .-.........+..++.        
T Consensus       170 -----~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~~pl~--------  235 (294)
T d1w6ua_         170 -----SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL-DPTGTFEKEMIGRIPCG--------  235 (294)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C-CTTSHHHHHHHTTCTTS--------
T ss_pred             -----ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc-CCcHHHHHHHhhcCCCC--------
Confidence                 111257999999999999999876   4899999999999766421100 00122334444443332        


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                       -+...+|+|.++..
T Consensus       236 -R~~~pediA~~v~f  249 (294)
T d1w6ua_         236 -RLGTVEELANLAAF  249 (294)
T ss_dssp             -SCBCHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHH
Confidence             25678999988764

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.1e-17  Score=144.77  Aligned_cols=163  Identities=13%  Similarity=0.156  Sum_probs=120.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc--ccCCCceEEeeCccccc------------ccC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH--HFGNPNFELIRHDVVEP------------LLL  179 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~--~~~~~~~~~~~~D~~~~------------~~~  179 (340)
                      ++||++|||||+++||.+++++|+++|++|++++|+.+...+...+  ......+.....|..+.            ...
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            7899999999999999999999999999999999975443322211  12334566677776543            234


Q ss_pred             CCCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHH----HcCCeEEEEeCcccccCCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAK----RVGARFLLTSTSEVYGDPLQHPQKETYWGNVN  251 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~----~~~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~  251 (340)
                      .+|+++||||........    +++...+++|+.++..+.+.+.    +.+.++|++||...+                .
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~----------------~  155 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK----------------V  155 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT----------------S
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc----------------C
Confidence            689999999976544322    2466789999999888877663    334589999996643                1


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          252 PIGVRSCYDEGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       252 ~~~~~~~Y~~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                      +......|+.||++.+.+.+.++.+     .+++++.+.||.|-.+
T Consensus       156 ~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~  201 (269)
T d1xu9a_         156 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE  201 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence            1122368999999999999998865     3689999999998654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.71  E-value=1.6e-17  Score=152.58  Aligned_cols=190  Identities=14%  Similarity=0.009  Sum_probs=126.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc------ccCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP------LLLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~D~Vih~A  188 (340)
                      +.|+|+|||||||||++|+++|+++|++|+++.|+.......  ......+++++.+|+.+.      ++.++|.++++.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence            457999999999999999999999999999999976543221  112345789999998764      356788888765


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAE  267 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  267 (340)
                      ....            ..|+..+.+++++|+++|+ ++++.||.........              .+...|..+|...|
T Consensus        80 ~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~--------------~~~~~~~~~k~~~~  133 (350)
T d1xgka_          80 TSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP--------------WPAVPMWAPKFTVE  133 (350)
T ss_dssp             CSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS--------------CCCCTTTHHHHHHH
T ss_pred             cccc------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCc--------------ccchhhhhhHHHHH
Confidence            4211            1567788999999999996 8888888654432211              22245777888777


Q ss_pred             HHHHHHHHhhCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCC-CeEEecCCceeEccccH-HHHHHHHHh
Q 019470          268 TLTMDYHRGAGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKE-PLTVYGDGKQTRSFQFV-SDLVRLTET  339 (340)
Q Consensus       268 ~~v~~~~~~~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~v~v-~Dva~a~~~  339 (340)
                      ..+    .+.+++++++||+.+++.........+..   .....+. ....+.+++..+.++++ +|+++++..
T Consensus       134 ~~~----~~~~~~~~~vr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~  200 (350)
T d1xgka_         134 NYV----RQLGLPSTFVYAGIYNNNFTSLPYPLFQM---ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQ  200 (350)
T ss_dssp             HHH----HTSSSCEEEEEECEEGGGCBSSSCSSCBE---EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred             HHH----HhhccCceeeeeceeeccccccccccccc---cccccccceeeecccCCCcceEEEeHHHHHHHHHH
Confidence            765    45589999999999887532111110000   0001111 22334456677777875 788887654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=8.1e-17  Score=142.05  Aligned_cols=164  Identities=14%  Similarity=-0.009  Sum_probs=123.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHh---CCCeEEEEeCCCCCcccc---cccccCCCceEEeeCcccccc---------
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFTGRKEN---VMHHFGNPNFELIRHDVVEPL---------  177 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~l~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~---------  177 (340)
                      .+++|+++||||+++||.+++++|++   +|++|++++|+.+...+.   +.......++..+.+|+.++.         
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            57889999999999999999999986   799999999975433221   111223457888999997741         


Q ss_pred             -------cCCCCEEEEcccCCCCCC-------CcCChhhHHHHHHHHHHHHHHHHHHc----C---CeEEEEeCcccccC
Q 019470          178 -------LLEVDQIYHLACPASPVH-------YKFNPVKTIKTNVVGTLNMLGLAKRV----G---ARFLLTSTSEVYGD  236 (340)
Q Consensus       178 -------~~~~D~Vih~Ag~~~~~~-------~~~~~~~~~~~Nv~g~~~ll~~a~~~----~---~~~i~~SS~~v~g~  236 (340)
                             ....|++|||||...+..       ..+++++.+++|+.++.++.+++...    +   .++|++||...+  
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~--  160 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL--  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT--
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccccc--
Confidence                   124789999999754322       11347789999999999999988543    2   279999997643  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh-hCCcEEEEEeCceeCC
Q 019470          237 PLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-AGVEVRIARIFNTYGP  292 (340)
Q Consensus       237 ~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-~gi~~~ivRp~~i~G~  292 (340)
                                    .+......|+.+|++.+.+++.++.+ .|+++++|.||.|-.+
T Consensus       161 --------------~~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~  203 (259)
T d1oaaa_         161 --------------QPYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             --------------SCCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             --------------CCCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence                          12222368999999999999999866 5899999999999664

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.70  E-value=3.1e-16  Score=137.56  Aligned_cols=167  Identities=11%  Similarity=-0.025  Sum_probs=116.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCcccccc------------c--
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------------L--  178 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~--  178 (340)
                      ++|+||||||+++||.+++++|+++|+  .|++.+|+.+...+ +. .....++.++.+|+.+..            +  
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~-l~-~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH-HH-HhhCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999996  68888887544332 22 223457899999997641            1  


Q ss_pred             CCCCEEEEcccCCCCCC--C---cCChhhHHHHHHHHHHHHHHHHHH----c------------CCeEEEEeCcccccCC
Q 019470          179 LEVDQIYHLACPASPVH--Y---KFNPVKTIKTNVVGTLNMLGLAKR----V------------GARFLLTSTSEVYGDP  237 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~--~---~~~~~~~~~~Nv~g~~~ll~~a~~----~------------~~~~i~~SS~~v~g~~  237 (340)
                      .++|++|||||......  .   .+++++.+++|+.|+.++.+++..    .            ..+++.+|+...+-..
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            14899999999754322  1   224778999999999998877632    1            1257777775432111


Q ss_pred             CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          238 LQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       238 ~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      ....         .+..+...|+.||++...+++.++.+   .|++++++.||.|-.+
T Consensus       160 ~~~~---------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~  208 (250)
T d1yo6a1         160 NTSG---------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN  208 (250)
T ss_dssp             CCST---------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred             Cccc---------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC
Confidence            1000         11223356999999999999999875   4899999999998554

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3.9e-17  Score=142.14  Aligned_cols=161  Identities=19%  Similarity=0.089  Sum_probs=111.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc----cc--cCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE----PL--LLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~--~~~~D~Vih~A  188 (340)
                      ++|+||||||+|+||.++++.|+++|++|.++++.......... .......+..+.|...    ..  ..++|++||||
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnA   79 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV-IVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA   79 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEE-ECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccc-eeecccCcHHHHHHHHHHHHHHhCCCCceEEEECC
Confidence            47899999999999999999999999999999886533221110 0000000000011100    01  12589999999


Q ss_pred             cCCCCCC-----CcCChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHH
Q 019470          189 CPASPVH-----YKFNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYD  260 (340)
Q Consensus       189 g~~~~~~-----~~~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~  260 (340)
                      |......     ..++++..+++|+.++.++.+++...   +.++|++||.....                +......|+
T Consensus        80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----------------~~~~~~~Y~  143 (236)
T d1dhra_          80 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----------------GTPGMIGYG  143 (236)
T ss_dssp             CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------CCTTBHHHH
T ss_pred             cccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC----------------CccCCcccH
Confidence            9533221     12347778999999999998888653   23899999976432                112236899


Q ss_pred             HHHHHHHHHHHHHHHh-----hCCcEEEEEeCceeCC
Q 019470          261 EGKRTAETLTMDYHRG-----AGVEVRIARIFNTYGP  292 (340)
Q Consensus       261 ~sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G~  292 (340)
                      .||++.+.+++.++.+     .|++++.|.||.|..+
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~  180 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP  180 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC
Confidence            9999999999999865     3799999999999764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.7e-16  Score=141.85  Aligned_cols=160  Identities=21%  Similarity=0.147  Sum_probs=116.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC---CCCcc--cccccc--cCCCceEEeeCcccccc----------cC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF---FTGRK--ENVMHH--FGNPNFELIRHDVVEPL----------LL  179 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~---~~~~~--~~~~~~--~~~~~~~~~~~D~~~~~----------~~  179 (340)
                      |.||||||+++||+++++.|+++|.+|+.+.+.   .+...  ......  ....++..+.+|+.++.          ..
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            468999999999999999999999976655432   21111  011111  13457889999997752          13


Q ss_pred             CCCEEEEcccCCCCCCC----cCChhhHHHHHHHHHHHHHHHH----HHcC-CeEEEEeCcccccCCCCCCCCCCCCCCC
Q 019470          180 EVDQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQKETYWGNV  250 (340)
Q Consensus       180 ~~D~Vih~Ag~~~~~~~----~~~~~~~~~~Nv~g~~~ll~~a----~~~~-~~~i~~SS~~v~g~~~~~~~~E~~~~~~  250 (340)
                      .+|++|||||.......    .++++..+++|+.|+.++.+++    ++.+ .++|++||....                
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~----------------  146 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL----------------  146 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT----------------
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc----------------
Confidence            59999999997654432    2357889999999999988876    4445 389999996543                


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          251 NPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       251 ~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                      .+......|+.+|++.+.+.+.++.+   +|+++++|.||.|-.+
T Consensus       147 ~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         147 MGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence            11122367999999999999999876   4999999999998654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.5e-16  Score=140.09  Aligned_cols=198  Identities=14%  Similarity=0.014  Sum_probs=131.0

Q ss_pred             CCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCccccc------------cc
Q 019470          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEP------------LL  178 (340)
Q Consensus       114 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~------------~~  178 (340)
                      +++|++|||||+|  +||.++++.|+++|++|++.+|++.... ...+.. ..........|..+.            ..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG-RVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            6789999999998  8999999999999999999999754322 111111 122344555555442            23


Q ss_pred             CCCCEEEEcccCCCCCCCc---------CChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYK---------FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~---------~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      ...|++||+++........         +.+...+.+|+.+...+.+++...-   ..+|++||....            
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~------------  149 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------  149 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc------------
Confidence            4589999999865332211         1244566777778888877775542   268888886532            


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHhh---CCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---GVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~~---gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                          .+......|+.+|.+.+.+++.++.+.   |+++++|+||.|..+....  ..........+.+..++.       
T Consensus       150 ----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~--~~~~~~~~~~~~~~~pl~-------  216 (258)
T d1qsga_         150 ----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG--IKDFRKMLAHCEAVTPIR-------  216 (258)
T ss_dssp             ----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG--STTHHHHHHHHHHHSTTS-------
T ss_pred             ----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccc--cchhhhHHHHHHhCCCCC-------
Confidence                111122679999999999999998764   7999999999998775321  111233334444433321       


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                        -+...+|++.++..
T Consensus       217 --R~~~peeia~~v~f  230 (258)
T d1qsga_         217 --RTVTIEDVGNSAAF  230 (258)
T ss_dssp             --SCCCHHHHHHHHHH
T ss_pred             --CCcCHHHHHHHHHH
Confidence              26678999988754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.68  E-value=6.7e-17  Score=140.54  Aligned_cols=157  Identities=18%  Similarity=0.133  Sum_probs=108.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcc-----ccc--ccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDV-----VEP--LLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~--~~~~~D~Vih~Ag  189 (340)
                      .|||||||+++||.+++++|+++|++|++++|...........  ....++..+.+.     ...  ...++|++|||||
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG   80 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNIL--VDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG   80 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEE--CCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccce--eccccCchhHHHHHHHHHHHHhcCCCeeEEEECCc
Confidence            3799999999999999999999999999999975432211110  001111111000     001  1245899999999


Q ss_pred             CCCCCC--C---cCChhhHHHHHHHHHHHHHHHHHHcC---CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHH
Q 019470          190 PASPVH--Y---KFNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDE  261 (340)
Q Consensus       190 ~~~~~~--~---~~~~~~~~~~Nv~g~~~ll~~a~~~~---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~  261 (340)
                      ......  .   .+.++.++++|+.++..+.+++...-   .++|++||...+.                +......|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~----------------~~~~~~~Y~a  144 (235)
T d1ooea_          81 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----------------PTPSMIGYGM  144 (235)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------CCTTBHHHHH
T ss_pred             ccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC----------------CcccccchHH
Confidence            643221  1   12466789999999999988886542   3899999966432                1122368999


Q ss_pred             HHHHHHHHHHHHHHh-----hCCcEEEEEeCceeC
Q 019470          262 GKRTAETLTMDYHRG-----AGVEVRIARIFNTYG  291 (340)
Q Consensus       262 sK~~~E~~v~~~~~~-----~gi~~~ivRp~~i~G  291 (340)
                      +|++.+.+++.++.+     .+++++.+.||.+-.
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T  179 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT  179 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcC
Confidence            999999999999865     377899999998844

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.68  E-value=1.9e-16  Score=139.56  Aligned_cols=160  Identities=19%  Similarity=0.257  Sum_probs=118.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc--cccccc--cCCCceEEeeCcccccc-----------cCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK--ENVMHH--FGNPNFELIRHDVVEPL-----------LLE  180 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~--~~~~~~--~~~~~~~~~~~D~~~~~-----------~~~  180 (340)
                      .+||||||+|+||.+++++|+++|+ +|+++.|+.....  +.....  ....++.++.+|+.++.           ..+
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            4899999999999999999999999 5777888633221  111111  12357889999997742           125


Q ss_pred             CCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHHHcCC-eEEEEeCcc-cccCCCCCCCCCCCCCCCCCCC
Q 019470          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQKETYWGNVNPIG  254 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~SS~~-v~g~~~~~~~~E~~~~~~~~~~  254 (340)
                      +|.||||+|........    +++...+++|+.++.++.++++..+. +||++||.. .+|..+                
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~----------------  153 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG----------------  153 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT----------------
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc----------------
Confidence            89999999976554422    24667889999999999998887765 899999955 444322                


Q ss_pred             CCChHHHHHHHHHHHHHHHHHhhCCcEEEEEeCceeCCCC
Q 019470          255 VRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRM  294 (340)
Q Consensus       255 ~~~~Y~~sK~~~E~~v~~~~~~~gi~~~ivRp~~i~G~~~  294 (340)
                       ...|+.+|...+.+.+.+.. .|++++.|.||.+.++++
T Consensus       154 -~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~  191 (259)
T d2fr1a1         154 -LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGM  191 (259)
T ss_dssp             -CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC----
T ss_pred             -cHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCcc
Confidence             25799999999999888755 599999999999887654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.3e-16  Score=140.37  Aligned_cols=178  Identities=17%  Similarity=0.052  Sum_probs=122.0

Q ss_pred             CCeE-EEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccc-cCCCceEEeeCcccccc------------cCC
Q 019470          116 GLRI-VVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHH-FGNPNFELIRHDVVEPL------------LLE  180 (340)
Q Consensus       116 ~~~v-lVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~------------~~~  180 (340)
                      ||+| |||||+++||.+++++|+++ |++|++.+|+.+...+...+. ....++.++.+|+.+..            ..+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4455 99999999999999999986 899999999765433222111 12356788999997742            246


Q ss_pred             CCEEEEcccCCCCCCCc----CChhhHHHHHHHHHHHHHHHHHHc---CCeEEEEeCcccc-cCCCCCC----------C
Q 019470          181 VDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKRV---GARFLLTSTSEVY-GDPLQHP----------Q  242 (340)
Q Consensus       181 ~D~Vih~Ag~~~~~~~~----~~~~~~~~~Nv~g~~~ll~~a~~~---~~~~i~~SS~~v~-g~~~~~~----------~  242 (340)
                      +|++|||||........    ++++..+++|+.|+..+++++...   +.++|++||.... +.....+          .
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~  161 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  161 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccccc
Confidence            99999999986554432    246678999999999999988653   1389999995432 1111000          0


Q ss_pred             CCC--------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh-------hCCcEEEEEeCceeCCC
Q 019470          243 KET--------------YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG-------AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       243 ~E~--------------~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~-------~gi~~~ivRp~~i~G~~  293 (340)
                      .+.              ......+..+...|+.||+....+.+.++++       .+++++.+.||.|-.+-
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m  233 (275)
T d1wmaa1         162 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  233 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             chhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence            000              0000112234468999999999988776654       28999999999987653

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.63  E-value=1e-14  Score=130.57  Aligned_cols=202  Identities=10%  Similarity=0.005  Sum_probs=129.7

Q ss_pred             CCCCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCcc------------cccccccCC---CceEEeeCccc
Q 019470          112 LKRKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRK------------ENVMHHFGN---PNFELIRHDVV  174 (340)
Q Consensus       112 ~~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~------------~~~~~~~~~---~~~~~~~~D~~  174 (340)
                      +++++|++|||||+|  +||.+++++|+++|++|++.+|......            .........   .++.-++.++.
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            478999999999887  8999999999999999999987531100            000000000   01111111110


Q ss_pred             c------------------------------cccCCCCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHH
Q 019470          175 E------------------------------PLLLEVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLA  218 (340)
Q Consensus       175 ~------------------------------~~~~~~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a  218 (340)
                      .                              ..+.++|++|||||......      ..+++...+++|+.+..++++++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence            0                              11346899999999643211      22357889999999999999988


Q ss_pred             HHcCC---eEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH----hhCCcEEEEEeCceeC
Q 019470          219 KRVGA---RFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHR----GAGVEVRIARIFNTYG  291 (340)
Q Consensus       219 ~~~~~---~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~----~~gi~~~ivRp~~i~G  291 (340)
                      .....   ..+.+++++.....               ......|..+|...+.+++.++.    ++|++++.|.||.+..
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~---------------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T  228 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERII---------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGS  228 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCC---------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBC
T ss_pred             HHHhhcCCcceeeeehhhcccc---------------cccccceecccccccccccccchhccccceEEecccccccccc
Confidence            76532   45566654432111               11225799999999998877654    3589999999999988


Q ss_pred             CCCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          292 PRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +..  ......+.+.+...+..|+.         .+...+|++.+++.
T Consensus       229 ~~~--~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~f  265 (297)
T d1d7oa_         229 RAA--KAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAF  265 (297)
T ss_dssp             CCS--SCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHH
T ss_pred             hhh--hhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHH
Confidence            753  22233455555555544432         25678899888764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=9.5e-16  Score=133.18  Aligned_cols=184  Identities=20%  Similarity=0.133  Sum_probs=122.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc-----------ccCCCCEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP-----------LLLEVDQIY  185 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----------~~~~~D~Vi  185 (340)
                      |++|||||+++||++++++|+++|++|++++|+.+..           ......+|+...           .....+.++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-----------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-----------cceEeeccccchhhhHHHHHhhhccccccchh
Confidence            6899999999999999999999999999999965432           223344444332           122345556


Q ss_pred             EcccCCCCCC--------CcCChhhHHHHHHHHHHHHHHHHHHc----------CC-eEEEEeCcccccCCCCCCCCCCC
Q 019470          186 HLACPASPVH--------YKFNPVKTIKTNVVGTLNMLGLAKRV----------GA-RFLLTSTSEVYGDPLQHPQKETY  246 (340)
Q Consensus       186 h~Ag~~~~~~--------~~~~~~~~~~~Nv~g~~~ll~~a~~~----------~~-~~i~~SS~~v~g~~~~~~~~E~~  246 (340)
                      ++++......        ..+.+++.+++|+.+..++++.+...          +. ++|++||...+..          
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~----------  140 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG----------  140 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC----------
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC----------
Confidence            6555432221        11246678899999988887766432          22 7999999764311          


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCce
Q 019470          247 WGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ  323 (340)
Q Consensus       247 ~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  323 (340)
                            ......|+.+|++.+.+++.++.+   +|+++++|.||.|-.+....    ........+.+..++  .     
T Consensus       141 ------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~----~~~~~~~~~~~~~~~--~-----  203 (241)
T d1uaya_         141 ------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG----LPEKAKASLAAQVPF--P-----  203 (241)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT----SCHHHHHHHHTTCCS--S-----
T ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch----hhhhHHHHHHhcCCC--C-----
Confidence                  112268999999999999999876   48999999999996653211    112233333333322  1     


Q ss_pred             eEccccHHHHHHHHHh
Q 019470          324 TRSFQFVSDLVRLTET  339 (340)
Q Consensus       324 ~~~~v~v~Dva~a~~~  339 (340)
                       .-+...+|+|++++.
T Consensus       204 -~R~g~pedvA~~v~f  218 (241)
T d1uaya_         204 -PRLGRPEEYAALVLH  218 (241)
T ss_dssp             -CSCCCHHHHHHHHHH
T ss_pred             -CCCcCHHHHHHHHHH
Confidence             125678999988764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.60  E-value=4.2e-15  Score=131.77  Aligned_cols=198  Identities=12%  Similarity=-0.052  Sum_probs=120.4

Q ss_pred             CCCCeEEEEcCch--HHHHHHHHHHHhCCCeEEEEeCCCCCccccccc-ccCCCceEEeeCccccc------------cc
Q 019470          114 RKGLRIVVTGGAG--FVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH-HFGNPNFELIRHDVVEP------------LL  178 (340)
Q Consensus       114 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~-~~~~~~~~~~~~D~~~~------------~~  178 (340)
                      +++|++|||||+|  +||.+++++|+++|++|++++|++.... ...+ .-......+...|+.++            .+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            6789999999887  8999999999999999999999743222 1111 11123455667777553            23


Q ss_pred             CCCCEEEEcccCCCCCCCc-----CChhhHHHHHH---HHHHHHHHHHHHcCC---eEEEEeCcccccCCCCCCCCCCCC
Q 019470          179 LEVDQIYHLACPASPVHYK-----FNPVKTIKTNV---VGTLNMLGLAKRVGA---RFLLTSTSEVYGDPLQHPQKETYW  247 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~-----~~~~~~~~~Nv---~g~~~ll~~a~~~~~---~~i~~SS~~v~g~~~~~~~~E~~~  247 (340)
                      ..+|++|||+|........     ..+......+.   .....+.........   .++.+|+.+....           
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-----------  150 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----------  150 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-----------
Confidence            4799999999965332211     12222222222   233333333333321   3555555554321           


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHHhCCCeEEecCCcee
Q 019470          248 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  324 (340)
Q Consensus       248 ~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  324 (340)
                           ......|+.+|.+.+.+++.++.+   +|+++++|.||.+..+.......  ...+........+.         
T Consensus       151 -----~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------  214 (274)
T d2pd4a1         151 -----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD--FRMILKWNEINAPL---------  214 (274)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHHSTT---------
T ss_pred             -----cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc--hHHHHHHHhhhhhc---------
Confidence                 122267999999999999998876   48999999999998764321111  12222222222222         


Q ss_pred             EccccHHHHHHHHHh
Q 019470          325 RSFQFVSDLVRLTET  339 (340)
Q Consensus       325 ~~~v~v~Dva~a~~~  339 (340)
                      .-+...+|++.+++.
T Consensus       215 ~r~~~pedIA~~v~f  229 (274)
T d2pd4a1         215 RKNVSLEEVGNAGMY  229 (274)
T ss_dssp             SSCCCHHHHHHHHHH
T ss_pred             cCCcCHHHHHHHHHH
Confidence            236778899988754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.60  E-value=1.8e-14  Score=128.04  Aligned_cols=193  Identities=13%  Similarity=0.029  Sum_probs=123.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc---CCCceEEee-----------------Cccccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF---GNPNFELIR-----------------HDVVEP  176 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~---~~~~~~~~~-----------------~D~~~~  176 (340)
                      ..+|||||+++||++++++|+++|++|++.+++.....+.+...+   .......+.                 +|+.+.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            378999999999999999999999999998876443322211111   112222333                 333322


Q ss_pred             ------------ccCCCCEEEEcccCCCCCCCcC----C--------------hhhHHHHHHHHHHHHHHHHHHc-----
Q 019470          177 ------------LLLEVDQIYHLACPASPVHYKF----N--------------PVKTIKTNVVGTLNMLGLAKRV-----  221 (340)
Q Consensus       177 ------------~~~~~D~Vih~Ag~~~~~~~~~----~--------------~~~~~~~Nv~g~~~ll~~a~~~-----  221 (340)
                                  .+.++|++|||||...+....+    +              +..++.+|+.+...+.+++.+.     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence                        2347999999999765433211    1              2246788999998888876431     


Q ss_pred             ----C--CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          222 ----G--ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       222 ----~--~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                          +  ..+++++|....                .+......|+.+|.+.+.+++.++.+   +|+++++|.||.+-..
T Consensus       163 ~~~~~~~~~ii~~~s~~~~----------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~  226 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTN----------------QPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  226 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTT----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred             HHhcCCCCccccccccccc----------------CCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc
Confidence                1  257777775432                11122368999999999999999876   4899999999974322


Q ss_pred             CCCCCCccHHHHHHHHHHhCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          293 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      .      .....+.+...+..++.        .-+...+|++++++.
T Consensus       227 ~------~~~~~~~~~~~~~~pl~--------~R~~~peeiA~~v~f  259 (284)
T d1e7wa_         227 D------DMPPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIF  259 (284)
T ss_dssp             G------GSCHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHH
T ss_pred             c------cCCHHHHHHHHhcCCCC--------CCCCCHHHHHHHHHH
Confidence            1      11244455555543320        125678899988764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.59  E-value=2.7e-14  Score=125.69  Aligned_cols=192  Identities=18%  Similarity=0.119  Sum_probs=122.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccc---ccCCCceEEeeCcccc----------------ccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPNFELIRHDVVE----------------PLL  178 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~---~~~~~~~~~~~~D~~~----------------~~~  178 (340)
                      ++|||||+++||.+++++|+++|++|++++|+.+...+.+..   ............|..+                +.+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999976543322211   1122344444433321                123


Q ss_pred             CCCCEEEEcccCCCCCCCc---------------CChhhHHHHHHHHHHHHHHHHHHcC---------C-eEEEEeCccc
Q 019470          179 LEVDQIYHLACPASPVHYK---------------FNPVKTIKTNVVGTLNMLGLAKRVG---------A-RFLLTSTSEV  233 (340)
Q Consensus       179 ~~~D~Vih~Ag~~~~~~~~---------------~~~~~~~~~Nv~g~~~ll~~a~~~~---------~-~~i~~SS~~v  233 (340)
                      .++|++|||||...+....               ..+..++..|+.+...........-         . .++.+++...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            4699999999976543211               1133455666666655555543321         1 4666666443


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCCCCCCCccHHHHHHHHHH
Q 019470          234 YGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPRMCIDDGRVVSNFVAQAL  310 (340)
Q Consensus       234 ~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~~~~~~~~~~~~~~~~~~  310 (340)
                      .                .+......|+.||++.+.+++.++.+   +|++++.|.||.+..+....      ..+...+.
T Consensus       163 ~----------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~------~~~~~~~~  220 (266)
T d1mxha_         163 D----------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP------QETQEEYR  220 (266)
T ss_dssp             G----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC------HHHHHHHH
T ss_pred             c----------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC------HHHHHHHH
Confidence            2                11122368999999999999999875   58999999999987654311      34444454


Q ss_pred             hCCCeEEecCCceeEccccHHHHHHHHHh
Q 019470          311 RKEPLTVYGDGKQTRSFQFVSDLVRLTET  339 (340)
Q Consensus       311 ~~~~~~~~~~g~~~~~~v~v~Dva~a~~~  339 (340)
                      +..++   +     +-+...+|++++++.
T Consensus       221 ~~~pl---~-----r~~~~peeva~~v~f  241 (266)
T d1mxha_         221 RKVPL---G-----QSEASAAQIADAIAF  241 (266)
T ss_dssp             TTCTT---T-----SCCBCHHHHHHHHHH
T ss_pred             hcCCC---C-----CCCCCHHHHHHHHHH
Confidence            44332   1     124578899988764

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.55  E-value=1.6e-14  Score=127.33  Aligned_cols=162  Identities=12%  Similarity=0.057  Sum_probs=110.0

Q ss_pred             CCCCeEEEEcCc--hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc--------------
Q 019470          114 RKGLRIVVTGGA--GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL--------------  177 (340)
Q Consensus       114 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------------  177 (340)
                      +++|++|||||+  .+||.+++++|+++|++|++.+|+.....+.+.+.+ ..+...+.+|+.++.              
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhccc
Confidence            688999999965  469999999999999999999987554333333332 235667788886541              


Q ss_pred             -cCCCCEEEEcccCCCCCC------Cc---CChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEeCcccccCCCCCCCCCC
Q 019470          178 -LLEVDQIYHLACPASPVH------YK---FNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQKET  245 (340)
Q Consensus       178 -~~~~D~Vih~Ag~~~~~~------~~---~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~SS~~v~g~~~~~~~~E~  245 (340)
                       +..+|+++||+|......      .+   ..+...+.+|+.........+.....  .+++++|.....          
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~----------  152 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR----------  152 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS----------
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc----------
Confidence             235899999999642111      11   12444566666666666666654432  344444433221          


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCC
Q 019470          246 YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGP  292 (340)
Q Consensus       246 ~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~  292 (340)
                            .......|+.+|.+.+.+++.++.+   +|++++.|.||.|-.+
T Consensus       153 ------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~  196 (268)
T d2h7ma1         153 ------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  196 (268)
T ss_dssp             ------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ------cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence                  1112368999999999999999876   4899999999988653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.52  E-value=1.7e-13  Score=124.65  Aligned_cols=161  Identities=9%  Similarity=0.015  Sum_probs=107.7

Q ss_pred             CCeEEEEc--CchHHHHHHHHHHHhCCCeEEEEeCCCCCcc------------ccccccc-CCCceEEeeCc--------
Q 019470          116 GLRIVVTG--GAGFVGSHLVDRLIARGDSVIVVDNFFTGRK------------ENVMHHF-GNPNFELIRHD--------  172 (340)
Q Consensus       116 ~~~vlVtG--atG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~------------~~~~~~~-~~~~~~~~~~D--------  172 (340)
                      +|.+||||  ++++||..+++.|+++|.+|++.++......            +...... ..........|        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57899999  5579999999999999999999876532111            0000000 00111122111        


Q ss_pred             ------------ccc------------cccCCCCEEEEcccCCCCCC------CcCChhhHHHHHHHHHHHHHHHHHHcC
Q 019470          173 ------------VVE------------PLLLEVDQIYHLACPASPVH------YKFNPVKTIKTNVVGTLNMLGLAKRVG  222 (340)
Q Consensus       173 ------------~~~------------~~~~~~D~Vih~Ag~~~~~~------~~~~~~~~~~~Nv~g~~~ll~~a~~~~  222 (340)
                                  +.+            +.+.++|++|||||......      ..++|+..+++|+.++..+++++...=
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                        111            12347999999999654321      224588899999999999988886641


Q ss_pred             ---CeEEEEeCcccccCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHh----hCCcEEEEEeCceeC
Q 019470          223 ---ARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----AGVEVRIARIFNTYG  291 (340)
Q Consensus       223 ---~~~i~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~v~~~~~~----~gi~~~ivRp~~i~G  291 (340)
                         .++|.+||.+....              .| .....|+.+|++.+.+++.++.+    +||+++.|.||.|-.
T Consensus       162 ~~~GsIv~iss~~~~~~--------------~p-~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKV--------------VP-GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEECGGGTSC--------------CT-TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccccccceeehhccc--------------cc-ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence               37999988654311              00 11256999999999999988754    589999999998743

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.50  E-value=1e-13  Score=121.36  Aligned_cols=172  Identities=15%  Similarity=0.027  Sum_probs=102.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~  195 (340)
                      ||+||||||+++||++++++|+++|++|++++|+.......+...   ........|........+|+++||||...   
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~id~lv~~Ag~~~---   74 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTA---EGRKQAIADVLAKCSKGMDGLVLCAGLGP---   74 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEECCTTSH---HHHHHHHHHHHTTCTTCCSEEEECCCCCT---
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHhcCH---HHHHHHHHHHHHHhCCCCcEEEEcCCCCC---
Confidence            578999999999999999999999999999998654322211110   01111111222233346899999998643   


Q ss_pred             CcCChhhHHHHHHHHHHHHHHHHHH----cCC-eEEEEeCcccc-cCCCCCCCCCC-C----------CCCCCCCCCCCh
Q 019470          196 YKFNPVKTIKTNVVGTLNMLGLAKR----VGA-RFLLTSTSEVY-GDPLQHPQKET-Y----------WGNVNPIGVRSC  258 (340)
Q Consensus       196 ~~~~~~~~~~~Nv~g~~~ll~~a~~----~~~-~~i~~SS~~v~-g~~~~~~~~E~-~----------~~~~~~~~~~~~  258 (340)
                      ..+.+.....+|..+...+.+....    ... ....+++.... -.....+.... .          ............
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~  154 (257)
T d1fjha_          75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA  154 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHH
Confidence            2345677778888888777665533    222 45555543211 11000000000 0          000001111235


Q ss_pred             HHHHHHHHHHHHHHHHHh---hCCcEEEEEeCceeCCC
Q 019470          259 YDEGKRTAETLTMDYHRG---AGVEVRIARIFNTYGPR  293 (340)
Q Consensus       259 Y~~sK~~~E~~v~~~~~~---~gi~~~ivRp~~i~G~~  293 (340)
                      |+.+|++.+.+++.++.+   +|++++.|.||.|-.+.
T Consensus       155 Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~  192 (257)
T d1fjha_         155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL  192 (257)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred             HHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence            999999999999999865   48999999999996653

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.13  E-value=3e-12  Score=107.03  Aligned_cols=80  Identities=14%  Similarity=0.143  Sum_probs=57.6

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccc-----ccccCCCCEEEE
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVV-----EPLLLEVDQIYH  186 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~D~Vih  186 (340)
                      .++++|+|+||||+|+||..+++.|+++|++|++++|+.+...+..........+.+...|+.     ++.+.++|+|||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            378999999999999999999999999999999999975443322111111122333344443     345778999999


Q ss_pred             cccCC
Q 019470          187 LACPA  191 (340)
Q Consensus       187 ~Ag~~  191 (340)
                      |||..
T Consensus        99 ~Ag~g  103 (191)
T d1luaa1          99 AGAIG  103 (191)
T ss_dssp             CCCTT
T ss_pred             cCccc
Confidence            99864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.33  E-value=1.7e-06  Score=67.70  Aligned_cols=110  Identities=14%  Similarity=0.051  Sum_probs=75.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc-ccccccCCCc-eEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE-NVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~-~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      ||.|+||+|.+|..++-.|..+|.  ++..+|........ .+.+...... -..+..+-..+.+.++|+||.+||... 
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~-   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR-   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC-
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC-
Confidence            799999999999999999998886  78888875321111 1111111111 123333434456789999999998532 


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                       ....+-.+++..|..-...+++.+++.+.  .++.+|
T Consensus        81 -~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 -KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             -CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence             23345677889999999999999999875  566555

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=6.3e-06  Score=64.48  Aligned_cols=111  Identities=14%  Similarity=0.067  Sum_probs=74.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHh-CC--CeEEEEeCCCCCccc--ccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIA-RG--DSVIVVDNFFTGRKE--NVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~-~G--~~V~~l~r~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      |||.|+|++|.+|.+++-.|.. .+  .++..+|..+....+  .+.+.........+..+-..+.+.++|+||.+||..
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~~   80 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVR   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSCC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCcc
Confidence            5899999999999999987754 34  588888874321111  111111112223333332334678999999999964


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      .  ....+-.+++..|..-...+.+.+.+.+.  .++.+|
T Consensus        81 ~--k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          81 R--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             C--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             C--CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            2  33345667889999999999999988874  566666

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.21  E-value=1.3e-05  Score=62.59  Aligned_cols=110  Identities=13%  Similarity=0.117  Sum_probs=74.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcc-c----ccccc--cCCCceEEe-eCcccccccCCCCEEEE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRK-E----NVMHH--FGNPNFELI-RHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~-~----~~~~~--~~~~~~~~~-~~D~~~~~~~~~D~Vih  186 (340)
                      |||.|+||+|.+|..++..|+.+|.  ++..+|+.+...+ +    .+.+.  ......++. ..+-....+.++|+||-
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            5899999999999999999999984  8999988643211 1    11111  111222332 22222356789999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLT  228 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~-~~i~~  228 (340)
                      +||...  ....+-.+++..|..-.+.+++..++.+. .++.+
T Consensus        81 tAG~~~--~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          81 TSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             eccccc--CCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            998532  23345667889999999999999988765 34434

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.11  E-value=1.1e-05  Score=63.25  Aligned_cols=111  Identities=20%  Similarity=0.268  Sum_probs=77.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccc---ccccc--cCCCceEEeeCcccccccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKE---NVMHH--FGNPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~---~~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      ..++||.|+|+ |++|..++..|+.+|.  ++..+|+.+.....   .+.+.  +......+...|.  +.+.++|+||.
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--~~l~daDvvvi   80 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY--DDCRDADLVVI   80 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG--GGTTTCSEEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH--HHhccceeEEE
Confidence            34568999996 9999999999999875  89999986433211   11111  1122344444443  56889999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ++|...  ....+-.+.+..|..-...+++..++.+.  .++.+|
T Consensus        81 tag~~~--~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          81 CAGANQ--KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             CCSCCC--CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             eccccc--ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            998533  23345567778999999999999888874  566665

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.09  E-value=6.7e-06  Score=64.42  Aligned_cols=109  Identities=15%  Similarity=0.154  Sum_probs=70.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCCCCcccc---cccc-cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFFTGRKEN---VMHH-FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~~~~~~~---~~~~-~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      .+||.|.|+ |++|..++..|+.+|  .+|.++|+.+...+..   +.+. ...........|.  +.+.++|+||.+||
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~--~~~~~adivvitag   81 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY--SDCKDADLVVITAG   81 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG--GGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH--HHhccccEEEEecc
Confidence            458999995 999999999999987  4899999865332211   1110 1112234444553  45789999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....+..+....|+.-...+++.+++.+.  .++.+|
T Consensus        82 ~~~--~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          82 APQ--KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            533  22345566778999999999999999875  455544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.00  E-value=1.8e-05  Score=62.43  Aligned_cols=115  Identities=12%  Similarity=0.069  Sum_probs=76.9

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc---cccc--cCCCceEEeeCcccccccCCCCEEEEc
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN---VMHH--FGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      .+.+||.|.|+ |.+|..++..|..++. ++.++|.++......   +.+.  ...........+..+.++.++|+|+.+
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvit   83 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT   83 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEe
Confidence            45679999997 9999999988888875 888888765432211   1110  111222333333345567899999999


Q ss_pred             ccCCCCCCC---cCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          188 ACPASPVHY---KFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~---~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +|.......   ..+-..++..|..-...+++.+++.+.  .++.+|
T Consensus        84 ag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          84 AGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            986543221   124566788999999999999998875  455454

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=1.6e-05  Score=62.12  Aligned_cols=97  Identities=16%  Similarity=0.102  Sum_probs=58.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-C---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-D---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      |++|.|.||||++|+.+++.|+++. +   +++++..+....+...   ......... .......+.++|++|.+++. 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~---~~~~~~~~~-~~~~~~~~~~~DivF~a~~~-   75 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS---FGGTTGTLQ-DAFDLEALKALDIIVTCQGG-   75 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG---GGTCCCBCE-ETTCHHHHHTCSEEEECSCH-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc---ccCCceeee-cccchhhhhcCcEEEEecCc-
Confidence            5789999999999999999888864 2   6666665433221111   111111111 11222346789999988741 


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccc
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVY  234 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~  234 (340)
                                       .-...+...+.+.|.+.+.++.++.|
T Consensus        76 -----------------~~s~~~~~~~~~~g~~~~VID~Ss~f  101 (146)
T d1t4ba1          76 -----------------DYTNEIYPKLRESGWQGYWIDAASSL  101 (146)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred             -----------------hHHHHhhHHHHhcCCCeecccCCccc
Confidence                             22445677777788765556655555

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.98  E-value=2.7e-05  Score=61.72  Aligned_cols=110  Identities=15%  Similarity=0.091  Sum_probs=76.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc---ccc--ccCCCceEEeeCcccccccCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMH--HFGNPNFELIRHDVVEPLLLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~---~~~--~~~~~~~~~~~~D~~~~~~~~~D~Vih~  187 (340)
                      +.+||.|.|+ |.+|..++-.|+.+|.  ++..+|++++.....   +.+  .+..........|  ...+.++|+||..
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d--~~~~~~adiVVit   95 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD--YSVTANSKIVVVT   95 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS--GGGGTTCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc--hhhcccccEEEEe
Confidence            4459999995 9999999999999987  899998864333211   111  1111222222333  3467899999999


Q ss_pred             ccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          188 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       188 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ||...  ....+-.+.+..|..-.+.++...++.+.  .++.+|
T Consensus        96 Ag~~~--~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          96 AGVRQ--QEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             CSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCcc--ccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99643  23345667888999999999999988874  566666

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.97  E-value=4.5e-05  Score=59.22  Aligned_cols=108  Identities=17%  Similarity=0.132  Sum_probs=71.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccc---cccc-CCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENV---MHHF-GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~---~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +||.|.|+ |.+|..++-.|+.+|.  ++..+|+.+.......   .+.. ..........  ..+++.++|+||.+||.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~--~~~~~~~adivvitag~   78 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG--DYSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CGGGGTTCSEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC--cHHHhCCCceEEEeccc
Confidence            37899996 9999999999999976  8999998765433221   1111 1123333333  34568899999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  ....+-...+..|..-...+++.+++.+.  .++.+|
T Consensus        79 ~~--~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          79 NR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             cc--CcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            42  23345677889999999999999998864  455555

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.97  E-value=5e-05  Score=58.95  Aligned_cols=109  Identities=13%  Similarity=0.069  Sum_probs=74.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccc-----cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHH-----FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |||.|+|| |.+|..++..|+.+|.  ++..+|+++..........     .......+...+. .+++.++|+||-+||
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            58999996 9999999999999974  8999998765432211111     0112334443222 346789999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....+-......|..-...+++.+++.+.  .++.+|
T Consensus        79 ~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          79 LPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             CCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             cCC--CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            532  23345567788999999999999988764  455554

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.93  E-value=4e-05  Score=61.73  Aligned_cols=112  Identities=16%  Similarity=0.110  Sum_probs=73.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC---C----eEEEEeCCCCCcc-cccc---cccCCC-ceEEeeCcccccccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG---D----SVIVVDNFFTGRK-ENVM---HHFGNP-NFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G---~----~V~~l~r~~~~~~-~~~~---~~~~~~-~~~~~~~D~~~~~~~~~D~  183 (340)
                      ..+|.|+||+|.||.+++-.|++.+   .    .+..++....... +.+.   ...... .-.....+-..+++.++|+
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDv  103 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW  103 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCce
Confidence            3489999999999999999988752   2    4455554322111 1111   111111 1233334445567889999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-C--CeEEEEe
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-G--ARFLLTS  229 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~--~~~i~~S  229 (340)
                      ||-.+|.  +.....+..+++..|..-...+.+++.+. +  ++++.+|
T Consensus       104 Vvi~ag~--~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         104 ALLIGAK--PRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             EEECCCC--CCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEeecc--CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            9999985  34455677889999999999999999885 4  3566665

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.92  E-value=4e-05  Score=59.45  Aligned_cols=108  Identities=17%  Similarity=0.030  Sum_probs=75.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCC--cc---cccccc-cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTG--RK---ENVMHH-FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~--~~---~~~~~~-~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ||.|+||+|.+|..++..|+.+|.  ++..+|.....  ..   ..+.+. .......+...|  .+.+.++|+||.+||
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~--~~~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC--HHHhhhcCEEEEecc
Confidence            799999999999999999999986  78888863211  11   111110 012334444444  345789999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....+-.+++..|..-.+.+.+..++.+.  .++.+|
T Consensus        80 ~~~--~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          80 IPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             CCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             ccc--ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            533  23345677889999999999999999874  566665

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.89  E-value=4e-05  Score=59.59  Aligned_cols=108  Identities=18%  Similarity=0.179  Sum_probs=74.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc---ccccc-CCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ||.|+|+ |.+|.+++..|+.+|.  ++..+|+.+......   +.+.. ......+...+.. +++.++|+||.+||..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~-~~~~daDvVVitaG~~   80 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGPR   80 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH-HHhhCCcEEEEecccc
Confidence            7999996 9999999999999986  899999865432211   11110 0112334333333 3578999999999864


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      .  ....+-.+++..|..-...+++.+++.+.  .++.+|
T Consensus        81 ~--~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          81 Q--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             C--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             c--CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            3  23345667889999999999999988875  455555

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.83  E-value=4.7e-05  Score=58.97  Aligned_cols=108  Identities=13%  Similarity=0.083  Sum_probs=73.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCccccccc---cc-CCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMH---HF-GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~---~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |||.|.|+ |.+|..++..|+.++.  ++..+|++++.......+   .. ......+...|  .+++.++|+||-+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~--~~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc--HHHhcCCCEEEEeccc
Confidence            58999996 9999999999998874  899998865332211111   00 11233444444  3468899999999986


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  .....-.+++..|..-...+++..++.+.  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          78 PQ--KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             CC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cc--CCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            43  23345567788899999999999988874  455544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.80  E-value=3.7e-05  Score=58.82  Aligned_cols=67  Identities=19%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      |+|+|+|+ |.+|+.+++.|.++|++|++++.+++.... ....   ....++.+|..++.      +.++|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~~~~---~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-ASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhh-hhhh---hhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            68999996 999999999999999999999986432221 1111   24578888887753      45788888654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.80  E-value=8.4e-05  Score=58.46  Aligned_cols=112  Identities=17%  Similarity=0.132  Sum_probs=70.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC----e---EEEEeCCCCCcc-ccc---ccccCCC-ceEEeeCcccccccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD----S---VIVVDNFFTGRK-ENV---MHHFGNP-NFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~----~---V~~l~r~~~~~~-~~~---~~~~~~~-~~~~~~~D~~~~~~~~~D~  183 (340)
                      ++||.|+||+|++|.+++-.|+..+.    .   ...++....... +..   .+..... .-.+...+-....+.++|+
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adv   83 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY   83 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccE
Confidence            45999999999999999999988753    1   122222111000 000   0111111 2233334444567899999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHc-CC--eEEEEe
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA--RFLLTS  229 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~-~~--~~i~~S  229 (340)
                      ||-+||..  .....+-.+++..|+.-...+.+.+.+. +.  .++.+|
T Consensus        84 ViitaG~~--~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          84 ALLVGAAP--RKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             EEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEeecCcC--CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            99999864  3344566778899999999999999885 33  455555

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=5.4e-05  Score=54.19  Aligned_cols=91  Identities=23%  Similarity=0.235  Sum_probs=62.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      +.++|+|+|.|. |--|..+++.|.++|++|++.|.+.........   . ....+...+..+..+.++|.||-.-|+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL---P-EAVERHTGSLNDEWLMAADLIVASPGIAL   76 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS---C-TTSCEEESBCCHHHHHHCSEEEECTTSCT
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH---h-hccceeecccchhhhccCCEEEECCCCCC
Confidence            467889999996 788999999999999999999986543322221   1 23334444444445667899998777521


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEE
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL  226 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i  226 (340)
                           +             ..+++.|++.|+.+|
T Consensus        77 -----~-------------~~~~~~a~~~gi~ii   92 (93)
T d2jfga1          77 -----A-------------HPSLSAAADAGIEIV   92 (93)
T ss_dssp             -----T-------------SHHHHHHHHTTCEEE
T ss_pred             -----C-------------CHHHHHHHHcCCCeE
Confidence                 1             146778888887654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=2.9e-05  Score=61.55  Aligned_cols=70  Identities=16%  Similarity=0.119  Sum_probs=46.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceE-EeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFE-LIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||+|.|+ |.+|..++..|.+.|++|.+++|................... ....+ ..+.+.++|+||.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~iii~v   71 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAN-DPDFLATSDLLLVTL   71 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEES-CHHHHHTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccc-hhhhhcccceEEEee
Confidence            69999997 999999999999999999999997654332222111111111 11111 223456799999865

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.74  E-value=5.9e-05  Score=58.50  Aligned_cols=109  Identities=15%  Similarity=0.048  Sum_probs=74.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc---cccc--cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHH--FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |||.|.|+ |.+|..++..|+.+|.  ++..+|++++.....   +.+.  .......+...+. .+.+.++|+||-.||
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-~~~~~~adiVvitag   78 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-HHHhccccEEEEecc
Confidence            58999996 9999999999998875  799998764332211   1111  0111223333222 257889999999998


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ...  ....+..+....|..-...+.+.+++.+.  .++.+|
T Consensus        79 ~~~--~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          79 LAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             CCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             ccC--CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            532  33445677888999999999999998874  455555

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.73  E-value=4e-05  Score=60.64  Aligned_cols=111  Identities=14%  Similarity=0.093  Sum_probs=73.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc---cccc--cCCCceEEeeCcccccccCCCCEEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHH--FGNPNFELIRHDVVEPLLLEVDQIYH  186 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih  186 (340)
                      ++..||.|+|+ |.+|..++..|+.+|.  ++..+|++++.....   +.+.  ...........|  ...+.++|+||.
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d--~~~~~~adivvi   93 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD--YNVSANSKLVII   93 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS--GGGGTTEEEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc--hhhhccccEEEE
Confidence            34458999995 9999999999999976  899998764332211   1111  111122233333  345689999999


Q ss_pred             cccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          187 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       187 ~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      +||....  ...+-.+.++.|..-...+++..++.+.  .++.+|
T Consensus        94 tag~~~~--~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          94 TAGARMV--SGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             CCSCCCC--TTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ecccccC--CCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9986432  2334445678899999999988888775  566655

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.72  E-value=7.5e-05  Score=55.44  Aligned_cols=99  Identities=14%  Similarity=0.074  Sum_probs=70.9

Q ss_pred             CCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          109 PLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       109 p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |.-.+.++++|+|.| +|-+|..-++.|++.|.+|++++.....   .........++++...+..+..+.+++.|+.+.
T Consensus         5 Pi~l~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~---~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at   80 (113)
T d1pjqa1           5 PIFCQLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIP---QFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT   80 (113)
T ss_dssp             EEEECCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCH---HHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred             ceEEEeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCCh---HHHHHHhcCCceeeccCCCHHHhCCCcEEeecC
Confidence            444577899999999 5899999999999999999999864432   222233446788888888888888999998654


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                      +         +.    +.    ...+.+.|++.+ .+|++.
T Consensus        81 ~---------d~----~~----n~~i~~~a~~~~-ilVNv~  103 (113)
T d1pjqa1          81 D---------DD----TV----NQRVSDAAESRR-IFCNVV  103 (113)
T ss_dssp             S---------CH----HH----HHHHHHHHHHTT-CEEEET
T ss_pred             C---------CH----HH----HHHHHHHHHHcC-CEEEeC
Confidence            2         11    12    235777888876 455544

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.67  E-value=0.00012  Score=56.86  Aligned_cols=94  Identities=20%  Similarity=0.143  Sum_probs=58.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      .++|.|.||||++|..|++.|.+++|   ++..+..+.. ..+.+.  .  ..-++...+.....+.++|+++.+++.  
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~-~Gk~i~--~--~~~~~~~~~~~~~~~~~~d~vf~a~p~--   74 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES-AGQRMG--F--AESSLRVGDVDSFDFSSVGLAFFAAAA--   74 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT-TTCEEE--E--TTEEEECEEGGGCCGGGCSEEEECSCH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc-CCccee--e--ccccchhccchhhhhccceEEEecCCc--
Confidence            36899999999999999998877665   6666643221 111111  1  112333334444556789999977641  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                      .....+...+.+.|.++|-.|+..
T Consensus        75 ----------------~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          75 ----------------EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ----------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ----------------chhhhhccccccCCceEEeechhh
Confidence                            123345566677788888777654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.66  E-value=9.1e-05  Score=58.24  Aligned_cols=112  Identities=14%  Similarity=0.116  Sum_probs=69.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-------eEEEEeCCCCCcc-cccc---cccC-CCceEEeeCcccccccCCCCE
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-------SVIVVDNFFTGRK-ENVM---HHFG-NPNFELIRHDVVEPLLLEVDQ  183 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~l~r~~~~~~-~~~~---~~~~-~~~~~~~~~D~~~~~~~~~D~  183 (340)
                      ++||.|+||+|.+|.+++-.|++.+-       ++..++....... +.+.   .... .....+...+-..+.+.++|+
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv   82 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV   82 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceE
Confidence            45999999999999999998886542       3444444322111 1110   1111 112223333444567889999


Q ss_pred             EEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHH-cCC--eEEEEe
Q 019470          184 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR-VGA--RFLLTS  229 (340)
Q Consensus       184 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~-~~~--~~i~~S  229 (340)
                      ||-++|...  ....+-.+.+..|..-...+.+...+ ++.  .+|.+|
T Consensus        83 VVitag~~~--~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          83 AILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             EEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEecccCC--CCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            999998543  23344556778999999999988866 454  344444

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.64  E-value=5.5e-05  Score=58.99  Aligned_cols=110  Identities=16%  Similarity=0.104  Sum_probs=71.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccc---cccc--cCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKEN---VMHH--FGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      |||.|+|+ |.+|..++-.|+.+|.  ++..+|+++......   +.+.  .......+...|  .+.+.++|+||-+||
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d--~~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND--WAALADADVVISTLG   78 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC--GGGGTTCSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC--HHHhccccEEEEecc
Confidence            58999995 9999999999999874  888888864432211   1111  111223344333  345789999999998


Q ss_pred             CCCCCCC--cCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          190 PASPVHY--KFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       190 ~~~~~~~--~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      .......  ..+-.+++..|..-...+.+..++.+.  .+|.+|
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            5432211  112335677899999999999998875  455555

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.61  E-value=5.1e-05  Score=58.91  Aligned_cols=109  Identities=16%  Similarity=0.147  Sum_probs=68.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccc-----cCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHH-----FGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +||.|.|+ |.+|..++-.|+.++. ++..+|..+........+.     +......+...+. ...+.++|+||-+||.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d-~~~~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN-YADTANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc-HHHhcCCCEEEEeeec
Confidence            48999996 9999999999988875 8888988654332211111     0111222332222 2357889999999985


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..  ....+..+.+..|..-...+++...+.+.  .++.+|
T Consensus        80 ~~--~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          80 PR--KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             C-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             cC--CcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            43  22334556678899999999999988774  455544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.54  E-value=2.7e-05  Score=62.95  Aligned_cols=36  Identities=28%  Similarity=0.446  Sum_probs=32.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      |||.|+||+|.+|+.|++.|++.|++|.+.+|+++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            589999999999999999999999999999997543

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.52  E-value=0.00036  Score=56.10  Aligned_cols=99  Identities=13%  Similarity=0.152  Sum_probs=59.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCC--Cccccc---cccc-CCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFT--GRKENV---MHHF-GNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~--~~~~~~---~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |++|.|.||||++|..|++.|.++. .++..+.-...  ...+..   ...+ ..........+..+....++|+++.+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al   80 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT   80 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence            6799999999999999999999974 46665532211  111111   1111 112223333333344456899999876


Q ss_pred             cCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          189 CPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       189 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                      ..                  .....+...+.+.++++|-.|+..
T Consensus        81 p~------------------~~s~~~~~~~~~~~~~vIDlSadf  106 (179)
T d2g17a1          81 AH------------------EVSHDLAPQFLQAGCVVFDLSGAF  106 (179)
T ss_dssp             CH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             cc------------------hhHHHHhhhhhhcCceeecccccc
Confidence            31                  112235566677788898888754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.51  E-value=0.00018  Score=56.13  Aligned_cols=111  Identities=14%  Similarity=0.168  Sum_probs=73.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc---cccc--cCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN---VMHH--FGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~---~~~~--~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .||.|.|+ |.+|..++..|+.++. ++..+|+++......   +.+.  +......+...+ ..+.+.++|+||.++|.
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~-~~~~~~~advvvitag~   81 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN-TYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC-CGGGGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc-cccccCCCcEEEEeccc
Confidence            48999995 9999999988887765 888888865433221   1110  111122233222 33567899999999996


Q ss_pred             CCCCC-C--cCChhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          191 ASPVH-Y--KFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       191 ~~~~~-~--~~~~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ..... .  ..+-..++..|..-...+++.+++.+.  .++.+|
T Consensus        82 ~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          82 TKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             SSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             ccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            43322 1  123556788999999999999998875  455555

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.29  E-value=0.00076  Score=52.20  Aligned_cols=93  Identities=16%  Similarity=0.250  Sum_probs=53.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC-C---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG-D---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G-~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      |||.|.||||++|..|++.|++.. +   ++..+.-+...-+. .  ...... ...........+.++|+||.+...  
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~--~~~~~~-~~~~~~~~~~~~~~~DvvF~alp~--   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P--NFGKDA-GMLHDAFDIESLKQLDAVITCQGG--   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C--CSSSCC-CBCEETTCHHHHTTCSEEEECSCH--
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c--ccCCcc-eeeecccchhhhccccEEEEecCc--
Confidence            589999999999999999888753 3   55555433221111 1  111111 111111122345789999987631  


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe--EEEEeCc
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR--FLLTSTS  231 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~--~i~~SS~  231 (340)
                                      .-+..+...+.+.|.+  +|=.|+.
T Consensus        75 ----------------~~s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          75 ----------------SYTEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             ----------------HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred             ----------------hHHHHHhHHHHHcCCceEEEeCCcc
Confidence                            1134566777777865  5555553

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.26  E-value=9.2e-05  Score=58.57  Aligned_cols=73  Identities=19%  Similarity=0.323  Sum_probs=53.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++++|+|.|+ |-+|..+++.|.+.|. +|.+..|..+... .+...+   +......+.....+.++|+||.+.+.
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~-~l~~~~---~~~~~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV-ELARDL---GGEAVRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH-HHHHHH---TCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHH-HHHHhh---hcccccchhHHHHhccCCEEEEecCC
Confidence            457789999996 9999999999999998 6888887543322 222221   34555666666677899999998763

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.25  E-value=0.00015  Score=56.63  Aligned_cols=39  Identities=26%  Similarity=0.313  Sum_probs=35.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +..+++|.|.||.|.+|+.+++.|.+.||+|.+.+|...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            567789999999999999999999999999999998543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.25  E-value=0.00013  Score=58.06  Aligned_cols=37  Identities=24%  Similarity=0.319  Sum_probs=32.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~  153 (340)
                      .|+|+|.|| |++|..+++.|.++|++|++++|+.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a   38 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESA   38 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHH
Confidence            579999986 9999999999999999999999976543

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.22  E-value=9.7e-05  Score=59.08  Aligned_cols=73  Identities=15%  Similarity=0.092  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++.+|+|+||+|.+|...++.+...|.+|+++++++..... . ..+.... ++..+.+.......++|+||.+.|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~-~-~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-P-LALGAEEAATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-H-HHTTCSEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccc-c-cccccceeeehhhhhhhhhccccccccccccc
Confidence            46689999999999999999988899999999986543322 1 1222221 111111111123457999999775

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.21  E-value=0.00089  Score=50.71  Aligned_cols=66  Identities=17%  Similarity=0.180  Sum_probs=47.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      |+++|.|+ |.+|+.+++.|.++|++|++++.+++....     +.......+.+|..++.      +.++|.||-+.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~-----~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-----YASYATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHH-----TTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHH-----HHHhCCcceeeecccchhhhccCCccccEEEEEc
Confidence            47889985 999999999999999999999985433222     22234456667776652      45688888654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.05  E-value=0.00013  Score=58.91  Aligned_cols=73  Identities=18%  Similarity=0.139  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCccccc-----ccCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEP-----LLLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~-----~~~~~D~Vih~A  188 (340)
                      ++.+|||+||+|.+|...++.....|.+|++++++++.. + ......... ++..+.|..+.     .-.++|+||++.
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~-~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v  106 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-A-YLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV  106 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-H-HHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-H-HHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence            567999999999999999998888999999999864321 1 222222222 22222332222     124699999988


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       107 G  107 (182)
T d1v3va2         107 G  107 (182)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.04  E-value=0.00042  Score=55.13  Aligned_cols=74  Identities=23%  Similarity=0.286  Sum_probs=49.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccccccc-CCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHF-GNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++|+|+|.| +|+.+++++..|.+.|.+|+++.|+.+...+ +...+ ....+.....+  +....++|+|||+...
T Consensus        15 ~~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~-l~~~~~~~~~~~~~~~~--~~~~~~~dliIN~Tp~   89 (170)
T d1nyta1          15 IRPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEE-LAKLFAHTGSIQALSMD--ELEGHEFDLIINATSS   89 (170)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHH-HHHHTGGGSSEEECCSG--GGTTCCCSEEEECCSC
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHH-HHHHHhhcccccccccc--cccccccceeeccccc
Confidence            45788999999 5889999999999999999999886543322 22211 11233333332  3334578999998643

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.0012  Score=54.88  Aligned_cols=71  Identities=18%  Similarity=0.165  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEc----------------CchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccc-
Q 019470          113 KRKGLRIVVTG----------------GAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVE-  175 (340)
Q Consensus       113 ~~~~~~vlVtG----------------atG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-  175 (340)
                      ++++++||||+                .||..|.+|++++.++|++|+++.-.....        ....+..+.....+ 
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--------~p~~~~~~~~~t~~~   74 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------TPPFVKRVDVMTALE   74 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------CCTTEEEEECCSHHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--------cccccccceehhhHH
Confidence            46777888884                479999999999999999999986532211        11234444433222 


Q ss_pred             ------cccCCCCEEEEcccCC
Q 019470          176 ------PLLLEVDQIYHLACPA  191 (340)
Q Consensus       176 ------~~~~~~D~Vih~Ag~~  191 (340)
                            ..+.++|++|++|++.
T Consensus        75 m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          75 MEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             HHHHHHHHGGGCSEEEECCBCC
T ss_pred             HHHHHHhhhccceeEeeeechh
Confidence                  2346799999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.00038  Score=47.67  Aligned_cols=37  Identities=38%  Similarity=0.367  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++++|+|+||+|.+|...++.+...|.+|++++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~   67 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES   67 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHH
Confidence            4558999999999999999988888999999988643

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.98  E-value=0.0013  Score=49.68  Aligned_cols=71  Identities=17%  Similarity=0.267  Sum_probs=52.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEE-eCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVV-DNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~  195 (340)
                      |||.|.|++|-+|+.|.+.+.++|+++.+. +++                        ....+.++|+||...-+     
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~------------------------~~~~~~~~DVvIDFS~p-----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN------------------------GVEELDSPDVVIDFSSP-----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT------------------------EEEECSCCSEEEECSCG-----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC------------------------cHHHhccCCEEEEecCH-----
Confidence            589999999999999999999999987653 210                        11234678999987532     


Q ss_pred             CcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       196 ~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                                   .++...++.|.+.++.+|.=+
T Consensus        52 -------------~~~~~~l~~~~~~~~p~ViGT   72 (128)
T d1vm6a3          52 -------------EALPKTVDLCKKYRAGLVLGT   72 (128)
T ss_dssp             -------------GGHHHHHHHHHHHTCEEEECC
T ss_pred             -------------HHHHHHHHHHHhcCCCEEEEc
Confidence                         335678899999998765433

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.96  E-value=0.00056  Score=54.80  Aligned_cols=73  Identities=19%  Similarity=0.108  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCccccc----ccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP----LLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~D~Vih~Ag  189 (340)
                      ++.+|||+||+|.+|...++-+...|.+|++..+++.+..  ....+....+.-.+.+..+.    .-.++|+||.+.|
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~--~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD--YLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH--HHHHTTCSEEEECC---------CCSCCEEEEEECST
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHH--HHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCC
Confidence            4568999999999999999988889999999998654322  21222222221111111111    1236999999887

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00019  Score=57.41  Aligned_cols=73  Identities=19%  Similarity=0.241  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc-----cCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL-----LLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~-----~~~~D~Vih~A  188 (340)
                      ++.+|||+||+|.+|...++.+...|.+|++++++++. .+... .+... -++..+.|..+..     -.++|+|+.+.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~-~~~~~-~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~  105 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-QKIVL-QNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEML  105 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHH-HTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccc-ccccc-ccCcccccccccccHHHHhhhhhccCCceEEeecc
Confidence            46699999999999999999988899999999975432 22222 22221 2222233333321     23589999987


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       106 g  106 (174)
T d1yb5a2         106 A  106 (174)
T ss_dssp             H
T ss_pred             c
Confidence            5

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.93  E-value=0.00064  Score=53.57  Aligned_cols=65  Identities=25%  Similarity=0.346  Sum_probs=43.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||.|.| .|.+|..+++.|.++|++|++.+|+.+........    ..++....+.  +.+.++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~----~~~~~~~~~~--~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLVDEAGQDL--SLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSCSEEESCG--GGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHh----hccceeeeec--ccccccccccccC
Confidence            5899998 59999999999999999999999864332221111    1111111221  3567899998643

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.90  E-value=0.0019  Score=50.93  Aligned_cols=68  Identities=13%  Similarity=0.085  Sum_probs=44.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |++|+|.| .|.+|..|++.|.+.|+  +|++.|++.+.......    ....+....+.......++|.||.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~----~~~~~~~~~~~~~~~~~~~dlIila~   70 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIIDEGTTSIAKVEDFSPDFVMLSS   70 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCSEEESCGGGGGGTCCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH----hhcchhhhhhhhhhhccccccccccC
Confidence            56899998 69999999999999996  78888885432221111    11223333333333445789999764

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.81  E-value=0.0033  Score=48.92  Aligned_cols=92  Identities=13%  Similarity=0.152  Sum_probs=54.1

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPV  194 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~  194 (340)
                      +|.|.||||++|.+|++.|.++.+   ++..+.-+ .........    ..-.....+..+....++|.++.+++.    
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~-~s~G~~~~~----~~~~~~~~~~~~~~~~~~d~~f~~~~~----   73 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-RSAGKSLKF----KDQDITIEETTETAFEGVDIALFSAGS----   73 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECG-GGTTCEEEE----TTEEEEEEECCTTTTTTCSEEEECSCH----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccc-ccccccccc----cCCcccccccchhhhhhhhhhhhccCc----
Confidence            799999999999999998888764   34444321 111111111    111222233344456678988877642    


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE  232 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~  232 (340)
                                    ..+......+.+.+.++|=.|+..
T Consensus        74 --------------~~s~~~~~~~~~~~~~VIDlSsdf   97 (154)
T d2gz1a1          74 --------------STSAKYAPYAVKAGVVVVDNTSYF   97 (154)
T ss_dssp             --------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             --------------cchhhHHhhhccccceehhcChhh
Confidence                          113344555666777888887754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.79  E-value=0.0022  Score=52.21  Aligned_cols=33  Identities=42%  Similarity=0.556  Sum_probs=30.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      |+|.|.| .|++|..++..|+++|++|+++|.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~   33 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSS   33 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCH
Confidence            6899997 89999999999999999999999753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.78  E-value=0.0011  Score=52.70  Aligned_cols=74  Identities=18%  Similarity=0.289  Sum_probs=49.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccC-CCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFG-NPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ..++++|+|.| +|+.++.++..|.+.+.+|+++.|+.+.... +.+.+. ...+.....|  +..+.++|+|||+...
T Consensus        15 ~~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~-l~~~~~~~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          15 LRPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKE-LAERFQPYGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             CCTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHH-HHHHHGGGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHH-HHHHHhhccccchhhhc--cccccccceeeecccc
Confidence            45778999999 5888999999999988899999997543322 211111 1223333333  3346789999998654

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.75  E-value=0.00022  Score=57.32  Aligned_cols=73  Identities=16%  Similarity=0.158  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccc-----cCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPL-----LLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~-----~~~~D~Vih~A  188 (340)
                      ++.+|||+||+|.+|...++.+...|.+|++++++++. .+.+. ...... ++..+.|+.+..     -.++|+||.+.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~-~~~l~-~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-REMLS-RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHH-TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccc-ccccc-cccccccccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            45699999999999999999888889999999875432 22222 222221 222233333321     14699999988


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       103 g  103 (183)
T d1pqwa_         103 A  103 (183)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.0026  Score=50.01  Aligned_cols=97  Identities=16%  Similarity=0.283  Sum_probs=58.5

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC-CCeEEE-EeCCCCCcc-cccccccCCCceEEeeCcccccccCCCCEEEEcccCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR-GDSVIV-VDNFFTGRK-ENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPAS  192 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~-l~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~  192 (340)
                      .++|+|.|++|-+|+.|++.+.+. +.++.+ +++...... .............+...|..+..+..+|+||...    
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs----   79 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFT----   79 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECS----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEec----
Confidence            458999999999999999999887 445544 344322111 1111111111112222233445567899999864    


Q ss_pred             CCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          193 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       193 ~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                                    .-.++...++.|.+.++.+|.=+|
T Consensus        80 --------------~p~~~~~~~~~a~~~~~~~ViGTT  103 (162)
T d1diha1          80 --------------RPEGTLNHLAFCRQHGKGMVIGTT  103 (162)
T ss_dssp             --------------CHHHHHHHHHHHHHTTCEEEECCC
T ss_pred             --------------cHHHHHHHHHHHHhccceeEEecC
Confidence                          224566788999999987664443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.70  E-value=0.00074  Score=53.57  Aligned_cols=72  Identities=21%  Similarity=0.201  Sum_probs=46.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc-----cCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL-----LLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~D~Vih~Ag  189 (340)
                      ++.+|||+||+|.+|...++-....|.+|+++++++++...  ...+....+. ...|...+.     -.++|+||.+.|
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~--~~~lGad~vi-~~~~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY--LKQLGASEVI-SREDVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH--HHHHTCSEEE-EHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH--HHhhcccceE-eccchhchhhhcccCCCceEEEecCc
Confidence            34479999999999999998877789999999997554322  1222222221 111221111     236899999876

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.65  E-value=0.00086  Score=53.58  Aligned_cols=32  Identities=22%  Similarity=0.404  Sum_probs=26.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEe
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~  147 (340)
                      |++|.|.||||++|..|++.|.+.-+ ++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            57999999999999999999988654 666664

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.61  E-value=0.0015  Score=52.57  Aligned_cols=33  Identities=27%  Similarity=0.540  Sum_probs=27.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEe
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVD  147 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~  147 (340)
                      +..||.|.||||+.|..|++.|.++-+ ++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            445899999999999999999988754 666554

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.60  E-value=0.00032  Score=56.14  Aligned_cols=73  Identities=19%  Similarity=0.135  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc-----cCCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL-----LLEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~-----~~~~D~Vih~A  188 (340)
                      ++.+|+|+||+|.+|...++.+...|.+|+++++++.+... .. .+... -++..+.|+.++.     -.++|+|+.+.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~-~~-~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~  105 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSV  105 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HH-HHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHH-HH-hcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence            35689999999999999999888889999999987543322 22 22222 2333344443321     13589999988


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      +
T Consensus       106 g  106 (179)
T d1qora2         106 G  106 (179)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.58  E-value=0.0027  Score=49.09  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=36.4

Q ss_pred             CCCCCCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          107 KIPLGLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       107 ~~p~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      ++|...++++|+|||+|| |.+|..-++.|++.|.+|+++...
T Consensus         4 ~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           4 SLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             cchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            455566789999999996 899999999999999999999643

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.57  E-value=0.0035  Score=46.59  Aligned_cols=35  Identities=23%  Similarity=0.363  Sum_probs=31.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      .++++|.| +|++|.+++..|.++|.+|+++.+.+.
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            46899999 699999999999999999999998754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.46  E-value=0.0014  Score=52.47  Aligned_cols=37  Identities=38%  Similarity=0.344  Sum_probs=32.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      +.+|||+||+|.+|...++-....|.+|++++++++.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k   68 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST   68 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhH
Confidence            3479999999999999999888889999999986544

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.39  E-value=0.0014  Score=51.66  Aligned_cols=73  Identities=21%  Similarity=0.187  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeC-cccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRH-DVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~-D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ++.+|+|.|+ |.+|...++.+...|.+|+++++++..... . ..+.... ++..+. +..+....++|.++.+.+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~-a-~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED-A-MKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH-H-HHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH-h-hccCCcEEeeccchHHHHHhhhcccceEEEEecC
Confidence            4568999986 999999998877889999999997554322 1 1222211 121111 2233344578999998764

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0013  Score=51.85  Aligned_cols=73  Identities=21%  Similarity=0.205  Sum_probs=47.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      .+.+|+|.|+ |.||...++.+...|.++++++++.... + ....+.... ++..+.+.......++|++|.+.|.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~-~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-E-AAKALGADEVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-H-HHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-H-HHhccCCcEEEECchhhHHHHhcCCCceeeeeeec
Confidence            4568999986 8899999988888999999988865432 2 222222221 2222222233345679999999873

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.36  E-value=0.0019  Score=50.02  Aligned_cols=64  Identities=19%  Similarity=0.166  Sum_probs=44.3

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||.|.| .|.+|..|++.|+++|++|++.++............     +.+  .+..++.+.++|+||-+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~--~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----VGV--TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----HTC--EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhc-----ccc--cccHHHHHhhcCeEEEEe
Confidence            5899997 799999999999999999998887544332222111     111  122345567899999765

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.30  E-value=0.0065  Score=47.62  Aligned_cols=36  Identities=28%  Similarity=0.236  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      .+.+|+|+| +|.||...+..+...|.+|+++++++.
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~   61 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPR   61 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHH
Confidence            445899997 689999999988889999999998643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.27  E-value=0.0011  Score=53.38  Aligned_cols=36  Identities=17%  Similarity=0.278  Sum_probs=32.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +-++|.|.|+ |.+|+.|+..++..|++|+++|++++
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEH   38 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHH
Confidence            3458999996 99999999999999999999999754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.24  E-value=0.0011  Score=52.18  Aligned_cols=65  Identities=15%  Similarity=0.152  Sum_probs=45.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |++|.+.| .|.+|..|++.|+++|++|.+.+|+......... .      .....+...+.+..+|+|+-+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~-~------~~~~~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-A------GASAARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-T------TCEECSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhh-h------hccccchhhhhccccCeeeecc
Confidence            56899998 8999999999999999999999986443222111 1      1122333445667799998765

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.17  E-value=0.04  Score=41.07  Aligned_cols=86  Identities=16%  Similarity=0.117  Sum_probs=54.0

Q ss_pred             CCCeEEEEcCc---hHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGA---GFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGat---G~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++|.|.|++   +..|..+.+.|.+.| ++|+.+....    +...      +...+ .++ ++.-..+|.++-+.  
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~----~~i~------G~~~y-~sl-~dlp~~vDlvvi~v--   72 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE----EEVQ------GVKAY-KSV-KDIPDEIDLAIIVV--   72 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC----SEET------TEECB-SST-TSCSSCCSEEEECS--
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc----cccC------CeEee-cch-hhcCCCCceEEEec--
Confidence            55699999998   999999999987766 5898886421    1111      11110 111 11123588888653  


Q ss_pred             CCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe-EEEEeC
Q 019470          191 ASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTST  230 (340)
Q Consensus       191 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~-~i~~SS  230 (340)
                                      .-..+..+++.|.+.|++ ++.+|+
T Consensus        73 ----------------p~~~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          73 ----------------PKRFVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             ----------------CHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred             ----------------ChHHhHHHHHHHHHcCCCEEEEecc
Confidence                            223455678889899984 666665

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.04  E-value=0.00072  Score=54.57  Aligned_cols=72  Identities=21%  Similarity=0.109  Sum_probs=43.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEE-EeCCCCCcccccccccCCC-ceEEeeCccccc----ccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIV-VDNFFTGRKENVMHHFGNP-NFELIRHDVVEP----LLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~----~~~~~D~Vih~Ag  189 (340)
                      .+|||+||+|.+|...++-+...|.++++ ++.+.+ ....+...+... -++..+.|..+.    .-.++|+|+.+.|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e-~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE-KCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHH-HHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHH-HHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            58999999999999999888778986554 444322 222222222222 223222233221    1246999999886

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.03  E-value=0.003  Score=50.11  Aligned_cols=34  Identities=26%  Similarity=0.202  Sum_probs=31.2

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      |+|.|.|+ |.+|..++..|.++|++|.+++|+++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~   35 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQ   35 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            68999995 99999999999999999999999643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=95.89  E-value=0.037  Score=38.43  Aligned_cols=68  Identities=13%  Similarity=0.097  Sum_probs=45.0

Q ss_pred             CeEEEEcCchHHHH-HHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          117 LRIVVTGGAGFVGS-HLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       117 ~~vlVtGatG~IG~-~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      |+|.+.|- |++|. .|++.|+++|++|.+-|+......+.+    ....+.+..+ -....+.++|.||...++
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L----~~~Gi~i~~g-h~~~~i~~~d~vV~SsAI   70 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYL----RKLGIPIFVP-HSADNWYDPDLVIKTPAV   70 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH----HHTTCCEESS-CCTTSCCCCSEEEECTTC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHH----HHCCCeEEee-ecccccCCCCEEEEecCc
Confidence            58888875 44443 789999999999999998754333332    2234455443 222335679999988775

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.87  E-value=0.0018  Score=50.76  Aligned_cols=64  Identities=17%  Similarity=0.296  Sum_probs=44.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||-|.| .|.+|..+++.|+++|++|++.+|+++...+.. .    ....  ..+...+.+.++|+||-+.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~----~~~~--~~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-A----AGAE--TASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H----TTCE--ECSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-H----hhhh--hcccHHHHHhCCCeEEEEc
Confidence            5799998 799999999999999999999998644322211 1    1111  2233345566799999765

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.86  E-value=0.009  Score=47.50  Aligned_cols=71  Identities=18%  Similarity=0.253  Sum_probs=47.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcc-ccccc-----c--cCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRK-ENVMH-----H--FGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~-~~~~~-----~--~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.|.| +|-.|..|+..|.+.|++|++..|...... +.+..     .  .......+...+..++.+.++|+||.+.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            6899999 599999999999999999999988432211 11100     0  0111233444455566788999999754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.76  E-value=0.031  Score=43.71  Aligned_cols=65  Identities=11%  Similarity=0.138  Sum_probs=41.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +.+||.|.| +|.+|+.+++.|.+. +.+++++........         ........+.......++|+|+.+..
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---------~~~~~~~~~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---------TKTPVFDVADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---------SSSCEEEGGGGGGTTTTCSEEEECSC
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc---------cccccccchhhhhhccccceEEEeCC
Confidence            345899999 699999999999886 457776654322211         11122333334445668999998764

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.76  E-value=0.0068  Score=47.64  Aligned_cols=67  Identities=13%  Similarity=0.223  Sum_probs=43.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      ++++|+|.|+ |+.|++++..|.+.|. +|.++.|+.+.. +.+...+.   ...+.    .....++|+|||+...
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka-~~L~~~~~---~~~~~----~~~~~~~DliINaTpi   83 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG-QYLAALYG---YAYIN----SLENQQADILVNVTSI   83 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH-HHHHHHHT---CEEES----CCTTCCCSEEEECSST
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH-HHHHHhhh---hhhhh----cccccchhhheecccc
Confidence            4568999995 9999999999999997 788888865432 22222211   11111    1123468999987543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.75  E-value=0.0084  Score=47.43  Aligned_cols=71  Identities=13%  Similarity=0.137  Sum_probs=45.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCc-eEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      .+|-+.| .|.+|..+++.|++.|++|++.+|+++...+.......... .-....+.....+.++|.++-+.
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECS
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEec
Confidence            3799999 69999999999999999999999976544332222111111 11122222334456788888764

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.67  E-value=0.041  Score=38.70  Aligned_cols=70  Identities=13%  Similarity=0.047  Sum_probs=47.3

Q ss_pred             CCCeEEEEcCchHHH-HHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          115 KGLRIVVTGGAGFVG-SHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       115 ~~~~vlVtGatG~IG-~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      +.++|.+.|. |++| +.||+.|.++|++|.+-|+......+.+.+    ..+.+...+..+ .+.++|.||...|+
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~----~Gi~v~~g~~~~-~i~~~d~vV~S~AI   77 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ----AGAKIYIGHAEE-HIEGASVVVVSSAI   77 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH----TTCEEEESCCGG-GGTTCSEEEECTTS
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH----CCCeEEECCccc-cCCCCCEEEECCCc
Confidence            4568888874 4444 678999999999999999864433333322    345555554433 35789999987764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.57  E-value=0.0022  Score=51.81  Aligned_cols=72  Identities=18%  Similarity=0.028  Sum_probs=46.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccc-----c----CCCceEEeeCcccccccCCCCEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH-----F----GNPNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~-----~----~~~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +.|+||.|.| +|-.|.+++..|.+.|++|.+.+|+++.........     +    -..++.  -.+..++++.++|+|
T Consensus         5 ~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~--~t~~l~~a~~~ad~i   81 (189)
T d1n1ea2           5 LYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNIT--FTSDVEKAYNGAEII   81 (189)
T ss_dssp             CCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEE--EESCHHHHHTTCSCE
T ss_pred             ceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccc--cchhhhhccCCCCEE
Confidence            4566899999 699999999999999999999998643221110000     0    011222  222344567789999


Q ss_pred             EEcc
Q 019470          185 YHLA  188 (340)
Q Consensus       185 ih~A  188 (340)
                      |.+.
T Consensus        82 iiav   85 (189)
T d1n1ea2          82 LFVI   85 (189)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            8753

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.51  E-value=0.013  Score=43.49  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++++|+|.| .|++|.+++..|.++|.+|+++.+.+
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            456899998 69999999999999999999998864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0096  Score=55.65  Aligned_cols=104  Identities=9%  Similarity=0.114  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcc----------c------------ccccccCCCceEEeeC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRK----------E------------NVMHHFGNPNFELIRH  171 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~----------~------------~~~~~~~~~~~~~~~~  171 (340)
                      +..+|+|.|+ |.+|.++++.|+..|. +++++|...-...          +            .+.+.-....++.+..
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~  102 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  102 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence            3458999996 7899999999999997 7888876421110          0            0110001123344444


Q ss_pred             cccc------cccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCcccccC
Q 019470          172 DVVE------PLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGD  236 (340)
Q Consensus       172 D~~~------~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~~v~g~  236 (340)
                      +..+      ..+.++|+||.+.                 .|......+.+.|++.++.||..++.+.||.
T Consensus       103 ~~~~~~~~~~~~~~~~dvVv~~~-----------------~~~~~~~~l~~~c~~~~ip~i~~~~~G~~G~  156 (529)
T d1yova1         103 SPENLLDNDPSFFCRFTVVVATQ-----------------LPESTSLRLADVLWNSQIPLLICRTYGLVGY  156 (529)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEES-----------------CCHHHHHHHHHHHHHHTCCEEEEEEETTEEE
T ss_pred             CchhhhhhHHHHhcCCCEEEECC-----------------CCHHHHHHHHHHHHHcCCCEEEEeccCCEEE
Confidence            3322      2355789999754                 2444455678999999999999998877763

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.0078  Score=47.96  Aligned_cols=77  Identities=10%  Similarity=0.007  Sum_probs=48.5

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccc--ccccc---CCCceEEeeCcc---cccccCCCCE
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKEN--VMHHF---GNPNFELIRHDV---VEPLLLEVDQ  183 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~--~~~~~---~~~~~~~~~~D~---~~~~~~~~D~  183 (340)
                      +.++++|+|.|+ |+.|+.++..|.+.|. +++++.|+.+.....  +.+.+   ....+.......   ....+.++|+
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccce
Confidence            457789999995 8999999999999987 788888865433211  11111   111222222221   2233567999


Q ss_pred             EEEcccC
Q 019470          184 IYHLACP  190 (340)
Q Consensus       184 Vih~Ag~  190 (340)
                      |||+...
T Consensus        94 iIN~Tp~  100 (182)
T d1vi2a1          94 LTNGTKV  100 (182)
T ss_dssp             EEECSST
T ss_pred             eccccCC
Confidence            9998654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.44  E-value=0.0057  Score=48.52  Aligned_cols=76  Identities=17%  Similarity=0.135  Sum_probs=47.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCccccc---ccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENV---MHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      +.++++|+|.| +|+.++.++..|.+.| +|+++.|+.....+..   ...........+..+..+..+.+.|++||+..
T Consensus        15 ~~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp   92 (177)
T d1nvta1          15 RVKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP   92 (177)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred             CcCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCc
Confidence            46788999999 5889999999997777 9999998644332211   11111111122222333444567899999765


Q ss_pred             C
Q 019470          190 P  190 (340)
Q Consensus       190 ~  190 (340)
                      .
T Consensus        93 ~   93 (177)
T d1nvta1          93 I   93 (177)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.40  E-value=0.016  Score=42.34  Aligned_cols=35  Identities=23%  Similarity=0.362  Sum_probs=31.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +++++|.| .|++|..++..|.+.|.+|+++.|.+.
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            35899999 599999999999999999999988643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.35  E-value=0.0037  Score=49.81  Aligned_cols=36  Identities=28%  Similarity=0.313  Sum_probs=30.7

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~  151 (340)
                      ++.+|+|+|+ |.||...+..+...|. +|+++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~   64 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPN   64 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccc
Confidence            4568999996 8999999999999997 7999988643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.30  E-value=0.02  Score=45.47  Aligned_cols=62  Identities=19%  Similarity=0.108  Sum_probs=47.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ...+++|.|.| .|-||+.+++.|..-|.+|++.++.......             ...+-.++.+..+|+|+.+.
T Consensus        39 ~l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~-------------~~~~~l~ell~~sDiv~~~~  100 (181)
T d1qp8a1          39 LIQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW-------------RFTNSLEEALREARAAVCAL  100 (181)
T ss_dssp             CCTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS-------------CCBSCSHHHHTTCSEEEECC
T ss_pred             cccCceEEEec-cccccccceeeeeccccccccccccccccce-------------eeeechhhhhhccchhhccc
Confidence            36789999999 7899999999999999999999986432110             01123566788899999755

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.27  E-value=0.032  Score=42.67  Aligned_cols=69  Identities=19%  Similarity=0.248  Sum_probs=50.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      .|+|+|. |-+|..+++.|.++|++|++++..++....... .....++.++.+|..++.      +.++|.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~-~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLE-QRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHH-HHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHH-HhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            5889995 899999999999999999999875433222222 222357888999987763      45689998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.16  E-value=0.021  Score=41.89  Aligned_cols=36  Identities=25%  Similarity=0.279  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      .+++++|.| +|+||..++..|.+.|.+|+++.+...
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            346899999 699999999999999999999988653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.039  Score=45.81  Aligned_cols=35  Identities=23%  Similarity=0.319  Sum_probs=29.8

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      .+..+|+|.| .|.+|.++++.|.+.|. +++++|..
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4566999999 68899999999999998 77777654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.12  E-value=0.0089  Score=47.11  Aligned_cols=39  Identities=28%  Similarity=0.342  Sum_probs=34.8

Q ss_pred             CCCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          111 GLKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       111 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      +.+.+||+++|.|-+.-+|+-|+..|+++|..|+.+...
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            347899999999999999999999999999999887653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.11  E-value=0.02  Score=42.22  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=31.1

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +++++|.| +|+||.+++..|.+.|.+|+++.+.+.
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence            35899999 699999999999999999999988643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.07  E-value=0.0045  Score=50.16  Aligned_cols=66  Identities=21%  Similarity=0.223  Sum_probs=47.0

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ....+++|.|.| .|.||+.+++.|..-|.+|++.++........       .   .+..+-.++.+..+|+|+.+.
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~-------~---~~~~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK-------K---GYYVDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH-------T---TCBCSCHHHHHHHCSEEEECS
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc-------c---eeeeccccccccccccccccC
Confidence            356789999999 89999999999999999999998753321110       0   112233455667789888665

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.06  E-value=0.0086  Score=46.14  Aligned_cols=64  Identities=14%  Similarity=0.222  Sum_probs=42.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |+|.+.| +|-+|.+|++.|++.| ++|++.+|+++... .+.+..   .+.... |  .+.+.++|+||-+.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~-~l~~~~---~~~~~~-~--~~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRE-RLEKEL---GVETSA-T--LPELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHH-HHHHHT---CCEEES-S--CCCCCTTSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHH-Hhhhhc---cccccc-c--cccccccceEEEec
Confidence            5899998 5999999999999987 89999998754332 222221   223222 1  12356789999653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.012  Score=45.90  Aligned_cols=68  Identities=19%  Similarity=0.164  Sum_probs=48.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      .+.+|+++|.| .|.||+.+++.|...|.+|++.++.+-..-+..   .  ..+.+.   ..++.+...|+||-+.|
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~---~--dG~~v~---~~~~a~~~adivvtaTG   88 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA---M--EGYEVT---TMDEACQEGNIFVTTTG   88 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---H--TTCEEC---CHHHHTTTCSEEEECSS
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh---c--CceEee---ehhhhhhhccEEEecCC
Confidence            46788999999 999999999999999999999988542221111   1  122222   34456677899987776

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.04  E-value=0.034  Score=44.33  Aligned_cols=66  Identities=17%  Similarity=0.084  Sum_probs=47.5

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ....+++|.|.| .|.||+.+++.|..-|.+|++.++.......           .....+-.++.+..+|+|+.++.
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----------~~~~~~~l~ell~~sDii~i~~p  105 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-----------NATQVQHLSDLLNMSDVVSLHVP  105 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-----------TCEECSCHHHHHHHCSEEEECCC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-----------hhhhhhhHHHHHhhccceeeccc
Confidence            356788999998 8999999999999999999999875322111           11222334556677898887654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.03  E-value=0.017  Score=42.30  Aligned_cols=34  Identities=15%  Similarity=0.285  Sum_probs=30.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +++|+|.| .|++|.+++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            46899999 59999999999999999999999864

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.018  Score=45.10  Aligned_cols=72  Identities=19%  Similarity=0.150  Sum_probs=44.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeCccccc--------ccCCCCEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEP--------LLLEVDQIY  185 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--------~~~~~D~Vi  185 (340)
                      ++.+|+|.|+ |.+|...+..+...|. +|+++++++....  ..+.+....+.....+...+        .-.++|+||
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~--~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS--KAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH--HHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHH--HHHHhCCcccccccccccccccccccccCCCCceEEE
Confidence            3458999986 9999999999999998 7999987643322  12222222222222111111        113689999


Q ss_pred             Eccc
Q 019470          186 HLAC  189 (340)
Q Consensus       186 h~Ag  189 (340)
                      .+.|
T Consensus       103 d~~G  106 (171)
T d1pl8a2         103 ECTG  106 (171)
T ss_dssp             ECSC
T ss_pred             eccC
Confidence            9887

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.01  E-value=0.0043  Score=48.02  Aligned_cols=65  Identities=15%  Similarity=0.245  Sum_probs=43.6

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||.+.| +|-+|.+|++.|++.|++|++.+|+.+... .+.+.+.   +..  ....++.+.++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~-~l~~~~g---~~~--~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSK-EIAEQLA---LPY--AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHH-HHHHHHT---CCB--CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHH-hhccccc---eee--echhhhhhhccceeeeec
Confidence            5788998 899999999999999999999988644332 2211211   111  112234456899999654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.00  E-value=0.068  Score=40.08  Aligned_cols=71  Identities=17%  Similarity=0.129  Sum_probs=48.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhC-CCeEEEE-eCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVV-DNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVH  195 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~~~  195 (340)
                      ||.|.|++|-+|+.|++.+.+. +.++.+. ++..                     ++......++|+||...-+     
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~---------------------~~~~~~~~~~DvvIDFS~p-----   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD---------------------PLSLLTDGNTEVVIDFTHP-----   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC---------------------CTHHHHTTTCSEEEECCCT-----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC---------------------chhhhccccCCEEEEcccH-----
Confidence            6899999999999999988776 5566543 2210                     0011122468999987632     


Q ss_pred             CcCChhhHHHHHHHHHHHHHHHHHHcCCeEEE
Q 019470          196 YKFNPVKTIKTNVVGTLNMLGLAKRVGARFLL  227 (340)
Q Consensus       196 ~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~  227 (340)
                                   ..+...++.|.+.++.+|.
T Consensus        55 -------------~~~~~~~~~~~~~~~~~Vi   73 (135)
T d1yl7a1          55 -------------DVVMGNLEFLIDNGIHAVV   73 (135)
T ss_dssp             -------------TTHHHHHHHHHHTTCEEEE
T ss_pred             -------------HHHHHHHHHHHhcCCCEEE
Confidence                         2355678999999987654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.99  E-value=0.005  Score=48.36  Aligned_cols=73  Identities=19%  Similarity=0.177  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCC-ceEEeeCcccccc-----cCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEPL-----LLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~-----~~~~D~Vih~  187 (340)
                      .+.+|+|+|++|.+|...+..+...|. +|+++++++....  ....+... .++....|..+..     -.++|+||.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~--~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~  104 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE--AAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDL  104 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH--HHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHH--HHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcc
Confidence            455899999999999999998888885 8888887543221  11122211 1121222222221     1358999998


Q ss_pred             cc
Q 019470          188 AC  189 (340)
Q Consensus       188 Ag  189 (340)
                      +|
T Consensus       105 ~g  106 (170)
T d1jvba2         105 NN  106 (170)
T ss_dssp             CC
T ss_pred             cc
Confidence            86

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.94  E-value=0.013  Score=46.28  Aligned_cols=113  Identities=11%  Similarity=0.105  Sum_probs=66.6

Q ss_pred             CCeEEEEcCchHHHHH--HHHHHHhC----CCeEEEEeCCCCCcccc---ccc--ccCCCceEEeeCcccccccCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSH--LVDRLIAR----GDSVIVVDNFFTGRKEN---VMH--HFGNPNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~--l~~~Ll~~----G~~V~~l~r~~~~~~~~---~~~--~~~~~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      .|||.|.|| |.+|..  ++..|+..    +.++..+|++++.....   ..+  .......++...+-.++++.++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            469999996 878764  34445543    35999999875433211   111  1122345666666666788999999


Q ss_pred             EEcccCCCCCCCcCCh------------------------hhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          185 YHLACPASPVHYKFNP------------------------VKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~~------------------------~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      ++.++......++.+.                        ......|+.-.+.+++..++...  .+|.+|
T Consensus        81 v~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          81 INTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             EECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             eeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9988753211100000                        00012477778888888887764  566666

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.93  E-value=0.0041  Score=49.22  Aligned_cols=72  Identities=22%  Similarity=0.217  Sum_probs=41.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEE-EEeCCCCCcccccccccCCCc-eEEeeCcccccc--c--CCCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVI-VVDNFFTGRKENVMHHFGNPN-FELIRHDVVEPL--L--LEVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~-~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~--~--~~~D~Vih~A  188 (340)
                      ++.+|+|.|+ |.||...+..+...|.+++ ++++++. +.+.. +.+.... ++..+.|..+..  +  .++|+||.+.
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~-k~~~a-~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~  104 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVES-RLELA-KQLGATHVINSKTQDPVAAIKEITDGGVNFALEST  104 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHH-HHHHH-HHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHH-HHHHH-HHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcC
Confidence            4568999996 9999999988888888655 4554332 21211 2222211 222222222221  1  2589999998


Q ss_pred             c
Q 019470          189 C  189 (340)
Q Consensus       189 g  189 (340)
                      |
T Consensus       105 G  105 (174)
T d1f8fa2         105 G  105 (174)
T ss_dssp             C
T ss_pred             C
Confidence            7

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.90  E-value=0.02  Score=41.82  Aligned_cols=34  Identities=26%  Similarity=0.443  Sum_probs=30.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++++|.| .|++|.+++..|.+.|.+|.++.|.+.
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            5899999 699999999999999999999988643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.80  E-value=0.019  Score=46.00  Aligned_cols=35  Identities=29%  Similarity=0.499  Sum_probs=31.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      -++|.|.|+ |.+|+.|+..++..|++|+++|++++
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~   38 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTED   38 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChH
Confidence            368999996 99999999999999999999999754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.80  E-value=0.022  Score=45.62  Aligned_cols=32  Identities=34%  Similarity=0.522  Sum_probs=27.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      |+|.|.| .|++|..++..| ++|++|+++|.++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            6899997 899999998655 6799999999864

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.78  E-value=0.022  Score=41.47  Aligned_cols=35  Identities=29%  Similarity=0.336  Sum_probs=30.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +++++|.| .|++|.+++..|.+.|.+|+++.+.+.
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence            35899998 699999999999999999999988643

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.76  E-value=0.038  Score=39.62  Aligned_cols=38  Identities=18%  Similarity=0.121  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +.++|+|+|.| +|--|..++..|.+.+.+|+.+.|...
T Consensus        29 ~f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            56889999999 689999999999988878777766543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.75  E-value=0.023  Score=42.58  Aligned_cols=35  Identities=26%  Similarity=0.428  Sum_probs=31.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      .++++|.| +|++|.+++..|.+.|.+|.++.+.+.
T Consensus        35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            46899999 699999999999999999999988643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.031  Score=41.36  Aligned_cols=34  Identities=24%  Similarity=0.320  Sum_probs=30.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++++|.| .|+||.+++..|.+.|.+|+++.|...
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccc
Confidence            5899999 599999999999999999999998753

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.70  E-value=0.0088  Score=46.81  Aligned_cols=74  Identities=22%  Similarity=0.298  Sum_probs=50.8

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEe--eCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELI--RHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~--~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      ++-+|+|.| .|-.|..=++...+.|..|.++|.+.....+ +...+. ..++..  +.+...+.+.++|+||.++-+.
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~-l~~~~~-~~~~~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSY-LETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHH-HHHhhc-ccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence            344899999 5999999999999999999999986543322 211111 123332  2334556778899999987643

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.69  E-value=0.018  Score=46.52  Aligned_cols=69  Identities=20%  Similarity=0.218  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++++++|+|-| -|-+|.++++.|.+.|.+|++.+.+.......     .....+.+..+  +-...+||+++=||.
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-----~~~g~~~~~~~--~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA-----VALGHTAVALE--DVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-----HHTTCEECCGG--GGGGCCCSEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-----HhhcccccCcc--ccccccceeeecccc
Confidence            57889999998 89999999999999999999887643211111     01122332221  223347999998764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.65  E-value=0.02  Score=45.98  Aligned_cols=68  Identities=24%  Similarity=0.320  Sum_probs=47.4

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ....++++.|.| .|-||+.+++.|..-|.+|++.++.........        ..+...+..++.+..+|+|+.+.
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~i~~~~  112 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA--------LGLQRVSTLQDLLFHSDCVTLHC  112 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH--------HTCEECSSHHHHHHHCSEEEECC
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh--------hccccccchhhccccCCEEEEee
Confidence            367889999999 799999999999999999999988543321111        11222333445566788777654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.54  E-value=0.031  Score=41.15  Aligned_cols=33  Identities=24%  Similarity=0.207  Sum_probs=29.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      +++++|.| .|+||.+++..|.+.|.+|+++.++
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            34799999 6999999999999999999999875

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.52  E-value=0.023  Score=41.87  Aligned_cols=34  Identities=24%  Similarity=0.384  Sum_probs=30.4

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++++|.| .|++|.+++..|.+.|.+|+++.+.+.
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            5899998 699999999999999999999988643

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.46  E-value=0.32  Score=35.08  Aligned_cols=83  Identities=19%  Similarity=0.244  Sum_probs=52.9

Q ss_pred             CeEEEEcCc---hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCCCC
Q 019470          117 LRIVVTGGA---GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASP  193 (340)
Q Consensus       117 ~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~~~  193 (340)
                      |+|.|.|++   +-.|..+.+.|++.|++|+.+...    .+...      +...+ .++ .+.-..+|.++-+.     
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~----~~~i~------G~~~y-~sl-~~lp~~~D~vvi~v-----   64 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN----YDEIE------GLKCY-RSV-RELPKDVDVIVFVV-----   64 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT----CSEET------TEECB-SSG-GGSCTTCCEEEECS-----
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc----ccccc------Ccccc-ccc-hhccccceEEEEEe-----
Confidence            589999988   679999999999999998887532    11111      11111 111 11223578887543     


Q ss_pred             CCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019470          194 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTS  229 (340)
Q Consensus       194 ~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~S  229 (340)
                                   .-..+..+++.|.+.|++.+++-
T Consensus        65 -------------p~~~~~~~l~~~~~~g~k~v~~~   87 (116)
T d1y81a1          65 -------------PPKVGLQVAKEAVEAGFKKLWFQ   87 (116)
T ss_dssp             -------------CHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             -------------CHHHHHHHHHHHHhcCCceEEec
Confidence                         22345567888888998766553

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.29  E-value=0.067  Score=38.67  Aligned_cols=37  Identities=24%  Similarity=0.392  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      ...||.|.| +|.+|+-++....+.|++|++++.++..
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~   46 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADA   46 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCC
Confidence            445899999 6999999999999999999999986543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.052  Score=42.42  Aligned_cols=37  Identities=24%  Similarity=0.302  Sum_probs=34.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      +.++|+|+|.|-+..+|+-|+..|+++|..|+.+...
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~   72 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK   72 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecc
Confidence            6789999999999999999999999999999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.23  E-value=0.028  Score=44.80  Aligned_cols=68  Identities=15%  Similarity=0.123  Sum_probs=46.9

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ...++++.|.| .|.||+.+++.|..-|.+|.+.++..........       ..+...+..++.+.++|+|+.+.
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------~~~~~~~~l~~~l~~sD~v~~~~  108 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-------LNLTWHATREDMYPVCDVVTLNC  108 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-------HTCEECSSHHHHGGGCSEEEECS
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc-------ccccccCCHHHHHHhccchhhcc
Confidence            56788999999 8999999999999999999999985432221111       01222333445667788877554

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.21  E-value=0.029  Score=45.27  Aligned_cols=64  Identities=22%  Similarity=0.337  Sum_probs=46.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ...+++|.|.| .|-||+.+++.|..-|.+|++.++.......        ..++..   -.++.+..+|+|+.+.
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------~~~~~~---~l~~l~~~~D~v~~~~  105 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------PDFDYV---SLEDLFKQSDVIDLHV  105 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------TTCEEC---CHHHHHHHCSEEEECC
T ss_pred             cccceeeeeee-cccccccccccccccceeeeccCCccchhhh--------cchhHH---HHHHHHHhcccceeee
Confidence            56788999999 8999999999999999999999985432211        122222   2345566789888654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.04  E-value=0.032  Score=44.67  Aligned_cols=69  Identities=17%  Similarity=0.164  Sum_probs=47.9

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ....++++.|.| .|.||+.+++.|..-|.+|++.++..........       ......+..++.+..+|+|+.+.
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------~~~~~~~~l~~ll~~sD~v~l~~  111 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-------YQATFHDSLDSLLSVSQFFSLNA  111 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-------HTCEECSSHHHHHHHCSEEEECC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc-------ccccccCCHHHHHhhCCeEEecC
Confidence            356789999999 7999999999999999999999875443222111       11222334455667788887554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.02  E-value=0.049  Score=42.36  Aligned_cols=37  Identities=30%  Similarity=0.462  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      +..+|+|+|.|.+..+|+-|+..|.++|..|+.+...
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~   70 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF   70 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence            5789999999999999999999999999999888653

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.97  E-value=0.044  Score=39.97  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=31.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +++++|.| +|++|..++..|.+.|.+|.++.+.+.
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            56899999 699999999999999999999998653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.97  E-value=0.028  Score=44.22  Aligned_cols=72  Identities=19%  Similarity=0.107  Sum_probs=44.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCc-eEEeeCccc-cc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVV-EP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~-~~-----~~~~~D~Vih  186 (340)
                      .+.+|+|+| .|.||...+..+...|. .|++.+.++...  ...+.+.... ++....|.. ..     .-.++|+||.
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~--~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie  104 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKF--PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLD  104 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH--HHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHH--HHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEE
Confidence            456899998 59999999999999998 577777754332  2222222221 111122211 11     1247999999


Q ss_pred             ccc
Q 019470          187 LAC  189 (340)
Q Consensus       187 ~Ag  189 (340)
                      +.|
T Consensus       105 ~~G  107 (174)
T d1e3ia2         105 CAG  107 (174)
T ss_dssp             SSC
T ss_pred             ecc
Confidence            987

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.94  E-value=0.06  Score=42.50  Aligned_cols=37  Identities=27%  Similarity=0.319  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..++|+|+|.| +|..|..-+..|.++|++|+++.+.+
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            44567999999 69999999999999999999998854

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.92  E-value=0.034  Score=40.99  Aligned_cols=35  Identities=29%  Similarity=0.361  Sum_probs=31.2

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      +++++|.| .|+||.+++..|.+.|.+|+++.|.+.
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            35899999 699999999999999999999988654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.91  E-value=0.019  Score=45.70  Aligned_cols=67  Identities=24%  Similarity=0.291  Sum_probs=46.1

Q ss_pred             CCCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          112 LKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       112 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ....++++.|.| .|.||+.+++.+..-|.+|++.++.........      ..+..   ...++.+.++|+|+.+.
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~------~~~~~---~~l~ell~~sDiv~~~~  106 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ------LGIEL---LSLDDLLARADFISVHL  106 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH------HTCEE---CCHHHHHHHCSEEEECC
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh------cCcee---ccHHHHHhhCCEEEEcC
Confidence            356788999999 799999999999988999999987543221111      01121   12345667789888654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=93.90  E-value=0.021  Score=45.55  Aligned_cols=38  Identities=18%  Similarity=0.017  Sum_probs=30.9

Q ss_pred             CCeEEE-EcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 019470          116 GLRIVV-TGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (340)
Q Consensus       116 ~~~vlV-tGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~  153 (340)
                      +.+++| +||+|.+|...++-....|.+|+++++..+..
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~   67 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL   67 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence            446666 59999999999988888899999999865543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.88  E-value=0.059  Score=48.65  Aligned_cols=35  Identities=26%  Similarity=0.378  Sum_probs=29.7

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNF  149 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~  149 (340)
                      ++..||||.|+ |.||.++++.|+..|. +++++|..
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            34568999996 7799999999999998 88888764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=93.87  E-value=0.031  Score=43.76  Aligned_cols=38  Identities=29%  Similarity=0.211  Sum_probs=30.0

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTG  152 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~  152 (340)
                      .++.+|+|.|+ |.+|...+..+...|. +|+++++++..
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k   65 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDK   65 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGG
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHH
Confidence            35668999998 5689888888988885 88888876543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.83  E-value=0.045  Score=40.50  Aligned_cols=34  Identities=18%  Similarity=0.295  Sum_probs=30.8

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +++++|.| .|+||.+++..|.+.|.+|+++.+.+
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            45899999 69999999999999999999998864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.83  E-value=0.031  Score=37.70  Aligned_cols=34  Identities=24%  Similarity=0.090  Sum_probs=30.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +|+|.|.| +|.+|+-++.+-.+.|++|++++...
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            46899999 69999999999999999999998654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.81  E-value=0.048  Score=44.60  Aligned_cols=34  Identities=29%  Similarity=0.379  Sum_probs=30.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      .++|+|.| .|..|...+..|.++|++|.+++|..
T Consensus         6 ~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35899999 59999999999999999999999853

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.78  E-value=0.074  Score=40.97  Aligned_cols=95  Identities=11%  Similarity=0.146  Sum_probs=49.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHh-CCC-eEEEE-eCCCCCcccccccccCCCceEEee--Ccc--cccccCCCCEEEEccc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIA-RGD-SVIVV-DNFFTGRKENVMHHFGNPNFELIR--HDV--VEPLLLEVDQIYHLAC  189 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~-~G~-~V~~l-~r~~~~~~~~~~~~~~~~~~~~~~--~D~--~~~~~~~~D~Vih~Ag  189 (340)
                      .||.|.| +|.||+.+...+++ ... +++++ +|+.........+..   .+....  .|.  ....+.++|+||.+.-
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~---~i~~~~~~~d~l~~~~~~~~iDiVf~ATp   80 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM---GVTTTYAGVEGLIKLPEFADIDFVFDATS   80 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT---TCCEESSHHHHHHHSGGGGGEEEEEECSC
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc---CCcccccceeeeeecccccccCEEEEcCC
Confidence            5899999 89999875444444 433 77766 454333222222111   222222  121  1223567999997531


Q ss_pred             CCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeCc
Q 019470          190 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTS  231 (340)
Q Consensus       190 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS~  231 (340)
                                      ..........-.+.+.|+.+|-.|+.
T Consensus        81 ----------------ag~h~~~~~~~~aa~~G~~VID~s~a  106 (157)
T d1nvmb1          81 ----------------ASAHVQNEALLRQAKPGIRLIDLTPA  106 (157)
T ss_dssp             ----------------HHHHHHHHHHHHHHCTTCEEEECSTT
T ss_pred             ----------------chhHHHhHHHHHHHHcCCEEEEcccc
Confidence                            11111122233344667788888874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.77  E-value=0.029  Score=43.86  Aligned_cols=72  Identities=19%  Similarity=0.105  Sum_probs=41.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCc-eEEeeC-ccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPN-FELIRH-DVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~-D~~~~-----~~~~~D~Vih  186 (340)
                      ++.+|+|.|+ |.+|...+..+...|. .|+++++++.. .+ +...+.... ++..+. |....     .-.++|+||.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k-~~-~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid  104 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-FA-RAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFE  104 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-HH-HHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH-HH-HHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeee
Confidence            4568999997 5789999988888897 56666654332 22 222222222 111111 11111     1246999999


Q ss_pred             ccc
Q 019470          187 LAC  189 (340)
Q Consensus       187 ~Ag  189 (340)
                      +.|
T Consensus       105 ~~G  107 (176)
T d2fzwa2         105 CIG  107 (176)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            987

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.70  E-value=0.03  Score=44.00  Aligned_cols=36  Identities=22%  Similarity=0.439  Sum_probs=31.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~  153 (340)
                      |+|-|.| .|.+|..+++.|++.|++|++.+|+.+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            5799998 89999999999999999999999865443

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.66  E-value=0.19  Score=37.70  Aligned_cols=86  Identities=15%  Similarity=0.169  Sum_probs=56.0

Q ss_pred             CCCeEEEEcCc---hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGA---GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      +.++|.|.|++   +-.|..+++.|++.|++|+.+....    ..+.      +... -.++ ...-..+|.++-+.   
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~----~~i~------G~~~-~~sl-~dlp~~iD~v~i~v---   82 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY----EEVL------GRKC-YPSV-LDIPDKIEVVDLFV---   82 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC----SEET------TEEC-BSSG-GGCSSCCSEEEECS---
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc----cccC------CCcc-cccc-cccCccceEEEEEe---
Confidence            34689999998   7899999999999999998885421    1111      1111 1112 12223578877653   


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                                     +-..+..+++.|.+.|++.+++.+
T Consensus        83 ---------------p~~~~~~~~~e~~~~g~k~v~~~~  106 (139)
T d2d59a1          83 ---------------KPKLTMEYVEQAIKKGAKVVWFQY  106 (139)
T ss_dssp             ---------------CHHHHHHHHHHHHHHTCSEEEECT
T ss_pred             ---------------CHHHHHHHHHHHHHhCCCEEEEec
Confidence                           233456788888888987776654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.59  E-value=0.047  Score=44.91  Aligned_cols=70  Identities=20%  Similarity=0.200  Sum_probs=46.1

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ++++++|+|-| -|-+|.++++.|.+.|.+|++.+.+........ ..   ...+.+..  .+....+||+++=||-
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~-~~---~g~~~~~~--~~~~~~~cDIl~PcA~  105 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV-AE---EGADAVAP--NAIYGVTCDIFAPCAL  105 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HH---HCCEECCG--GGTTTCCCSEEEECSC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH-Hh---cCCcccCC--cccccccccEeccccc
Confidence            57889999999 899999999999999999999876432211111 11   12222222  1223346888888775

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=93.39  E-value=0.013  Score=46.34  Aligned_cols=73  Identities=21%  Similarity=0.193  Sum_probs=44.4

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCC-ceEEeeCccccc---c--cCCCCEEEEc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP---L--LLEVDQIYHL  187 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~---~--~~~~D~Vih~  187 (340)
                      ++.+|+|.|+ |.+|...++.+...|. +|+++++++.+.  .....+... -++..+.+..+.   .  -.++|+||.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~--~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~  103 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV--EAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMA  103 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH--HHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH--HHHHhhCccccccccchhHHHHHHHHhhccCcceEEEc
Confidence            4558999985 9999999988888897 799988754322  111222211 122222222221   1  1359999999


Q ss_pred             ccC
Q 019470          188 ACP  190 (340)
Q Consensus       188 Ag~  190 (340)
                      +|.
T Consensus       104 ~g~  106 (174)
T d1jqba2         104 GGG  106 (174)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            873

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.38  E-value=0.047  Score=47.12  Aligned_cols=35  Identities=31%  Similarity=0.565  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++|+|+|.| +|.-|...|..|.++|++|.++..+.
T Consensus         1 k~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCC
Confidence            467999999 69999999999999999999998754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=93.18  E-value=0.044  Score=42.95  Aligned_cols=73  Identities=21%  Similarity=0.048  Sum_probs=45.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCC-ceEEeeCccc-ccc-----cCCCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVV-EPL-----LLEVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~-~~~-----~~~~D~Vi  185 (340)
                      .++.+|+|.|+ |.+|...+..+...|. +|+++++++.+..  ....+... -++....|.. ...     -.++|++|
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~--~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vi  102 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP--KAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAV  102 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH--HHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHH--HHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEE
Confidence            35668999995 9999999999988897 7888887543322  11222221 1222223321 111     13699999


Q ss_pred             Eccc
Q 019470          186 HLAC  189 (340)
Q Consensus       186 h~Ag  189 (340)
                      .+.|
T Consensus       103 d~~g  106 (174)
T d1p0fa2         103 ECAG  106 (174)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            9886

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.15  E-value=0.05  Score=41.91  Aligned_cols=35  Identities=20%  Similarity=0.311  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC--eEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD--SVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~l~r~~  150 (340)
                      .+|||+|.| .|++|..++..|.+.|.  +|+++++.+
T Consensus         1 ~gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            368999999 59999999999999885  788887654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.09  E-value=0.052  Score=42.65  Aligned_cols=35  Identities=17%  Similarity=0.175  Sum_probs=30.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~  151 (340)
                      ++||+|.| +|..|...+..|.++|+ +|+++.+...
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            46899999 59999999999999998 5999988643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.97  E-value=0.056  Score=44.93  Aligned_cols=34  Identities=29%  Similarity=0.306  Sum_probs=30.6

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +|||+|.| +|.-|...+..|.++|++|.++.+..
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            47999999 69999999999999999999998753

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.86  E-value=0.051  Score=42.48  Aligned_cols=113  Identities=10%  Similarity=-0.020  Sum_probs=61.2

Q ss_pred             CeEEEEcC-chHHHHHHHHHHHhCC----CeEEEEeCCCCCcccccccc-------cCCCceEEeeCcccccccCCCCEE
Q 019470          117 LRIVVTGG-AGFVGSHLVDRLIARG----DSVIVVDNFFTGRKENVMHH-------FGNPNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       117 ~~vlVtGa-tG~IG~~l~~~Ll~~G----~~V~~l~r~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      +||.|.|| +.+.+..++..++...    .++..+|.++..........       .......+....-..+++.++|+|
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV   81 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV   81 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence            48999996 3344555554444431    38888888654321111110       012233444443344567899999


Q ss_pred             EEcccCCCCCCCcCC------------------hhhHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019470          185 YHLACPASPVHYKFN------------------PVKTIKTNVVGTLNMLGLAKRVGA--RFLLTS  229 (340)
Q Consensus       185 ih~Ag~~~~~~~~~~------------------~~~~~~~Nv~g~~~ll~~a~~~~~--~~i~~S  229 (340)
                      |.+|+..+...+..+                  -......|+.-.+.+++..++...  .++.+|
T Consensus        82 v~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          82 TTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             EECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            999986432111000                  011223567777778888888764  555555

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=92.73  E-value=0.045  Score=42.70  Aligned_cols=70  Identities=19%  Similarity=0.183  Sum_probs=41.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCceEEeeC--ccccc-----ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPNFELIRH--DVVEP-----LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~--D~~~~-----~~~~~D~Vih  186 (340)
                      .+.+|+|.|+ |.+|...+..+...|. .|+++++++.+.  .....+...  .+++.  |..+.     .-.++|+||.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~--~~~~~~ga~--~~i~~~~~~~~~~~~~~~~~g~d~vid  106 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL--KLAERLGAD--HVVDARRDPVKQVMELTRGRGVNVAMD  106 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH--HHHHHTTCS--EEEETTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH--HHHhhcccc--eeecCcccHHHHHHHhhCCCCceEEEE
Confidence            3568999985 9999999988877886 666666643221  121122221  22222  22221     1236999999


Q ss_pred             ccc
Q 019470          187 LAC  189 (340)
Q Consensus       187 ~Ag  189 (340)
                      +.|
T Consensus       107 ~~g  109 (172)
T d1h2ba2         107 FVG  109 (172)
T ss_dssp             SSC
T ss_pred             ecC
Confidence            987

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.52  E-value=0.063  Score=44.65  Aligned_cols=32  Identities=22%  Similarity=0.337  Sum_probs=29.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      .|+|.| +|.+|..++.+|.++|.+|+++++..
T Consensus         6 DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            399999 69999999999999999999999864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=92.43  E-value=0.3  Score=36.31  Aligned_cols=88  Identities=17%  Similarity=0.160  Sum_probs=53.4

Q ss_pred             CCCeEEEEcCc---hHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccCC
Q 019470          115 KGLRIVVTGGA---GFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPA  191 (340)
Q Consensus       115 ~~~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~~  191 (340)
                      +.++|.|.|++   +-.|..+++.|++.|++++.+.-+...  ....      +.. ...++. +.-..+|.++-+.   
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~--~~i~------g~~-~~~~l~-~i~~~iD~v~v~~---   78 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG--EELF------GEE-AVASLL-DLKEPVDILDVFR---   78 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT--SEET------TEE-CBSSGG-GCCSCCSEEEECS---
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc--ceee------cee-cccchh-hccCCCceEEEec---
Confidence            34589999998   558999999999999999887543211  1110      111 111111 1123578887653   


Q ss_pred             CCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCeEEEEeC
Q 019470          192 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTST  230 (340)
Q Consensus       192 ~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~~i~~SS  230 (340)
                                     +-.....+++.|.+.|++.+++.+
T Consensus        79 ---------------p~~~v~~~v~~~~~~g~k~i~~q~  102 (136)
T d1iuka_          79 ---------------PPSALMDHLPEVLALRPGLVWLQS  102 (136)
T ss_dssp             ---------------CHHHHTTTHHHHHHHCCSCEEECT
T ss_pred             ---------------cHHHHHHHHHHHHhhCCCeEEEec
Confidence                           223344567778888887666654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.41  E-value=0.11  Score=40.83  Aligned_cols=32  Identities=22%  Similarity=0.416  Sum_probs=26.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC-CeEEEEeC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDN  148 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~l~r  148 (340)
                      |-||.|-| .|.||+.+++.|.+++ .+|+++..
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd   33 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK   33 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC
Confidence            34799998 8999999999999885 47777754

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.32  E-value=0.095  Score=43.02  Aligned_cols=35  Identities=26%  Similarity=0.147  Sum_probs=31.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      .+||+|.| .|..|..++..|.++|++|+++++...
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            34899999 599999999999999999999998643

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=92.09  E-value=0.073  Score=44.11  Aligned_cols=33  Identities=24%  Similarity=0.565  Sum_probs=29.9

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      |+|+|.|| |.-|...+..|.++|++|+++.+.+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            58999995 9999999999999999999998753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.05  E-value=0.095  Score=44.24  Aligned_cols=35  Identities=26%  Similarity=0.354  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++|+|+|.| +|..|...+..|.++|++|.++.+..
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456999999 69999999999999999999998753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.02  E-value=0.12  Score=39.81  Aligned_cols=35  Identities=26%  Similarity=0.190  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ++.+|+|.|+ |.+|...+..+...|.+|+++++++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~   61 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDD   61 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchh
Confidence            4568999886 9999999998888899999998854

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.87  E-value=0.072  Score=41.12  Aligned_cols=69  Identities=16%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcccC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACP  190 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag~  190 (340)
                      -..+|+++|.| -|++|+-+++.|...|.+|+++.+.+-..-+..   .  ..+++..   .++++...|++|-+.|-
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~---m--dGf~v~~---~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV---M--EGFNVVT---LDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH---T--TTCEECC---HHHHTTTCSEEEECCSS
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH---h--cCCccCc---hhHccccCcEEEEcCCC
Confidence            35788999999 899999999999999999999987543222221   1  2333322   24566778999987763

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=91.80  E-value=0.087  Score=41.26  Aligned_cols=72  Identities=17%  Similarity=0.049  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCC-ceEEeeCccccc------ccCCCCEEEE
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNP-NFELIRHDVVEP------LLLEVDQIYH  186 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~------~~~~~D~Vih  186 (340)
                      ++.+|+|+|+ |.+|...+..+...|. +|+++++++++..  +...+... .++..+.|....      .-.++|++|.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~--~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE--KAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH--HHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH--HHHhcCCcEEECccccchHHHHHHHHhccccceEEEE
Confidence            4568999985 9999999999999995 8999998654432  22222221 222222222111      1247999999


Q ss_pred             ccc
Q 019470          187 LAC  189 (340)
Q Consensus       187 ~Ag  189 (340)
                      +.|
T Consensus       106 ~~g  108 (176)
T d1d1ta2         106 VIG  108 (176)
T ss_dssp             CSC
T ss_pred             eCC
Confidence            886

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.77  E-value=0.11  Score=44.18  Aligned_cols=36  Identities=25%  Similarity=0.235  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      .+++++|+|-| -|-+|.++++.|.+.|.+|++++..
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            57889999999 6999999999999999999988643

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.33  E-value=0.22  Score=38.76  Aligned_cols=32  Identities=28%  Similarity=0.450  Sum_probs=25.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDN  148 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r  148 (340)
                      |++|.|-| -|-||+.+++.|.+++. +|.++..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            56899998 89999999999988864 6666543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.94  E-value=0.22  Score=40.38  Aligned_cols=36  Identities=25%  Similarity=0.338  Sum_probs=32.1

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ...++|+|.| +|..|...+..|.++|++|+++.+..
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeecc
Confidence            4567999999 69999999999999999999998764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.91  E-value=0.067  Score=41.69  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=42.4

Q ss_pred             CCeEEEEcCchHHHHH-HHHHHHhC-----CCeEEEEeCCCCCccc--ccccc---cCCCceEEeeCcccccccCCCCEE
Q 019470          116 GLRIVVTGGAGFVGSH-LVDRLIAR-----GDSVIVVDNFFTGRKE--NVMHH---FGNPNFELIRHDVVEPLLLEVDQI  184 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~-l~~~Ll~~-----G~~V~~l~r~~~~~~~--~~~~~---~~~~~~~~~~~D~~~~~~~~~D~V  184 (340)
                      ..||.|.|| |.+|.. ++..|+.+     +.+|..+|.+++....  .....   .......+....-..+++.++|+|
T Consensus         3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            348999997 444443 44445543     2389999986543321  11111   111233444433345678899999


Q ss_pred             EEcccCC
Q 019470          185 YHLACPA  191 (340)
Q Consensus       185 ih~Ag~~  191 (340)
                      |..+|..
T Consensus        82 vitag~~   88 (167)
T d1u8xx1          82 MAHIRVG   88 (167)
T ss_dssp             EECCCTT
T ss_pred             EECCCcC
Confidence            9999864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.86  E-value=0.16  Score=38.55  Aligned_cols=34  Identities=24%  Similarity=0.467  Sum_probs=28.4

Q ss_pred             CeEEEE-cCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          117 LRIVVT-GGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVt-GatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +.++|. .+.||||..++..|.++|.+|+++.+..
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            356665 3569999999999999999999998854

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.78  E-value=0.3  Score=37.91  Aligned_cols=31  Identities=19%  Similarity=0.427  Sum_probs=25.0

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDN  148 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r  148 (340)
                      +||.|-| .|-||+.+++.|.++.. +|.++..
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd   34 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITK   34 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEec
Confidence            4899999 79999999999988754 6666543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.53  E-value=0.17  Score=39.06  Aligned_cols=34  Identities=21%  Similarity=0.132  Sum_probs=28.2

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      ++++|+|.| +|++|.+++..|.+.|.+|.++.+.
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~   35 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG   35 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence            456899999 6999999999999999877666544

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=90.49  E-value=0.24  Score=38.87  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=31.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCc
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGR  153 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~  153 (340)
                      -+|+|.| .|-.|.+=++..+..|..|.++|.+....
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~   65 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATK   65 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence            3899999 59999999999999999999999876543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=90.43  E-value=0.15  Score=39.42  Aligned_cols=73  Identities=22%  Similarity=0.106  Sum_probs=41.3

Q ss_pred             CCCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCCCcccccccccCCCc-eEEeeCccc-cc-----ccCCCCEEE
Q 019470          114 RKGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFTGRKENVMHHFGNPN-FELIRHDVV-EP-----LLLEVDQIY  185 (340)
Q Consensus       114 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~~~~D~~-~~-----~~~~~D~Vi  185 (340)
                      .++.+|+|.|+ |.+|...+..+...|. .|+++++.+....  ....+.... ++..+.|.. ++     .-.++|+++
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~--~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vi  103 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFE--KAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSL  103 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH--HHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHH--HHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceee
Confidence            35668999996 5577777777777766 7888887544322  122222211 111122211 11     113699999


Q ss_pred             Eccc
Q 019470          186 HLAC  189 (340)
Q Consensus       186 h~Ag  189 (340)
                      .+.|
T Consensus       104 d~~G  107 (175)
T d1cdoa2         104 ECVG  107 (175)
T ss_dssp             ECSC
T ss_pred             eecC
Confidence            9987

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.30  E-value=0.14  Score=40.89  Aligned_cols=32  Identities=25%  Similarity=0.373  Sum_probs=29.2

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      -|+|.| +|.-|...+..|.++|++|.++.++.
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            388999 79999999999999999999998864

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=89.97  E-value=0.14  Score=39.04  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=27.3

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhC--CCeEEEEeC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIAR--GDSVIVVDN  148 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~l~r  148 (340)
                      +|+|.|.|+||-||....+-+.+.  .++|.++.-
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            569999999999999999888765  358887754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.94  E-value=0.18  Score=38.37  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=27.4

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDN  148 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r  148 (340)
                      ||+|.|.|+||-||...++-+.+..  ++|.++.-
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            5789999999999999998887763  47877754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.78  E-value=0.055  Score=43.26  Aligned_cols=35  Identities=31%  Similarity=0.247  Sum_probs=28.0

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      .+.+|+|.|+ |.+|...+..+...|. +|+++++++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~   60 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP   60 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc
Confidence            4569999985 9999888887777777 788888753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.68  E-value=0.18  Score=41.94  Aligned_cols=32  Identities=31%  Similarity=0.473  Sum_probs=29.0

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      -|+|.| +|..|..++.+|.++|++|+++++..
T Consensus         5 DvvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            388999 69999999999999999999999854

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.02  E-value=0.16  Score=43.16  Aligned_cols=34  Identities=18%  Similarity=0.346  Sum_probs=30.0

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      |..|+|.| +|.-|..+|..|.++|++|.++..+.
T Consensus         1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            34799999 69999999999999999999998753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.97  E-value=0.28  Score=41.02  Aligned_cols=34  Identities=21%  Similarity=0.354  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      +..||+|.| +|.-|..-+.+|.++|++|.++...
T Consensus         4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCC
Confidence            345899999 6999999999999999999999654

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=88.76  E-value=0.6  Score=33.92  Aligned_cols=63  Identities=17%  Similarity=0.144  Sum_probs=43.9

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccCCCceEEeeCcccccc------cCCCCEEEEcc
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPL------LLEVDQIYHLA  188 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------~~~~D~Vih~A  188 (340)
                      -++|.| -|-+|..+++.|  +|++|.+++..+..... .    ...++.++.+|..++.      +.+++.+|-+.
T Consensus         2 HivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~-~----~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           2 HVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKK-V----LRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHH-H----HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             EEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHH-H----HhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            478888 588899999998  46678888775443221 1    2246788889987753      45688888654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.64  E-value=0.16  Score=42.38  Aligned_cols=32  Identities=19%  Similarity=0.275  Sum_probs=29.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      +|+|.|| |..|..++..|.++|++|.++++.+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            6999994 8999999999999999999998864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.37  E-value=0.39  Score=34.48  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=26.7

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHh---CCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~l~r~~  150 (340)
                      +++++|.|| |++|.+++..|.+   +|.+|+++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            358999995 9999999965554   456899998754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.08  E-value=0.32  Score=40.07  Aligned_cols=36  Identities=28%  Similarity=0.384  Sum_probs=32.3

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      ++++++|+|-| -|-+|.++++.|.+.|.+|++++..
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            56888999998 8999999999999999999988754

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.91  E-value=0.25  Score=41.54  Aligned_cols=32  Identities=47%  Similarity=0.749  Sum_probs=28.7

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      +|+|.| +|.+|..++.+|.++|. +|.++++..
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            699999 59999999999999996 699999864

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.53  E-value=0.043  Score=44.62  Aligned_cols=26  Identities=38%  Similarity=0.511  Sum_probs=23.5

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeE
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSV  143 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V  143 (340)
                      |||+|.| +|.+|...+.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            5899999 6999999999999999854

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.22  E-value=0.32  Score=38.20  Aligned_cols=33  Identities=15%  Similarity=0.234  Sum_probs=27.8

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~  150 (340)
                      |||+|.| +|++|.+++..|.+.+  .+|+++.|..
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            6899999 5899999999998874  4788888754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.86  E-value=0.44  Score=38.91  Aligned_cols=34  Identities=24%  Similarity=0.313  Sum_probs=29.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFFT  151 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~~  151 (340)
                      ++|+|.| +|..|..++..|.+.|. +|.++.+.+.
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            4899999 59999999999999995 8999988654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.43  E-value=0.62  Score=33.21  Aligned_cols=35  Identities=20%  Similarity=0.236  Sum_probs=27.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHh---CCCeEEEEeCCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIA---RGDSVIVVDNFFT  151 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~l~r~~~  151 (340)
                      +++++|.| .|++|.+++..|.+   .|.+|.++.+.+.
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence            45899999 59999999976543   4889999988643

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.26  E-value=0.4  Score=36.22  Aligned_cols=31  Identities=29%  Similarity=0.383  Sum_probs=26.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ||+|.| .|++|.+++..|. ++.+|+++.+.+
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            789999 5999999999885 577999998753

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=86.25  E-value=0.43  Score=36.23  Aligned_cols=36  Identities=28%  Similarity=0.187  Sum_probs=29.9

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ++.+|+|.|+ |.+|...+..+...|.+|+++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~   62 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDE   62 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHH
Confidence            4568999875 99999999988889999999987543

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.21  E-value=0.43  Score=40.76  Aligned_cols=35  Identities=26%  Similarity=0.263  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhCC--CeEEEEeCCC
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIARG--DSVIVVDNFF  150 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~l~r~~  150 (340)
                      .+|+|+|.| +|.-|...+..|+++|  ++|+++.+..
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            457899999 5999999999999886  5999998864

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=86.03  E-value=1.3  Score=32.11  Aligned_cols=90  Identities=12%  Similarity=0.005  Sum_probs=53.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhC-CCeEEEEeCCCCC-cccccccccCCCceEEeeCcccccccC-CCCEEEEcccCCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIAR-GDSVIVVDNFFTG-RKENVMHHFGNPNFELIRHDVVEPLLL-EVDQIYHLACPASPV  194 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~-G~~V~~l~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~D~Vih~Ag~~~~~  194 (340)
                      +|+|.| +|.+|..|++.+... |+++++.....+. .....      .++.+...|....... .+++.+-+..     
T Consensus         5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I------~Gi~V~~~~~l~~~~~~~i~iai~~i~-----   72 (126)
T d2dt5a2           5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRPV------RGGVIEHVDLLPQRVPGRIEIALLTVP-----   72 (126)
T ss_dssp             EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE------TTEEEEEGGGHHHHSTTTCCEEEECSC-----
T ss_pred             eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE------CCEEEecHHHHHHHHhhcccEEEEeCC-----
Confidence            799999 699999999877543 6777766443222 11111      2455665555444332 3565554431     


Q ss_pred             CCcCChhhHHHHHHHHHHHHHHHHHHcCCe-EEEEeCcc
Q 019470          195 HYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-FLLTSTSE  232 (340)
Q Consensus       195 ~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~-~i~~SS~~  232 (340)
                                   -.....+++.|.+.|++ +..++...
T Consensus        73 -------------~~~~~~I~d~l~~~gIk~I~~f~~~~   98 (126)
T d2dt5a2          73 -------------REAAQKAADLLVAAGIKGILNFAPVV   98 (126)
T ss_dssp             -------------HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred             -------------HHHHHHHHHHHHHcCCCEEeecCcee
Confidence                         12235688889999984 66665543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.90  E-value=0.38  Score=39.89  Aligned_cols=35  Identities=17%  Similarity=0.273  Sum_probs=31.6

Q ss_pred             CCCCCeEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q 019470          113 KRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (340)
Q Consensus       113 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r  148 (340)
                      ++++++|+|-| -|-+|.++++.|.+.|.+|+++..
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            56888999999 799999999999999999998754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.49  E-value=0.25  Score=37.99  Aligned_cols=74  Identities=23%  Similarity=0.252  Sum_probs=41.9

Q ss_pred             CeEEEEcCchHHHHHHHH-HHHhC-----CCeEEEEeCCCCCccccc--ccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSHLVD-RLIAR-----GDSVIVVDNFFTGRKENV--MHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~-~Ll~~-----G~~V~~l~r~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      |||.|.|| |.+|..++- .|++.     +.++..+|.+++......  .+........+.......+.+.++|+||..|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            58999997 445544442 22221     358999998654332111  1111112233333334556789999999999


Q ss_pred             cCC
Q 019470          189 CPA  191 (340)
Q Consensus       189 g~~  191 (340)
                      +..
T Consensus        80 ~~~   82 (162)
T d1up7a1          80 RPG   82 (162)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            853

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.43  E-value=1.6  Score=32.65  Aligned_cols=32  Identities=22%  Similarity=0.382  Sum_probs=26.0

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFT  151 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~~  151 (340)
                      ||-+.| .|.+|..+++.|++.|+.| +.+|..+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~   33 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFE   33 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHH
Confidence            688888 6999999999999999866 4566543

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.20  E-value=0.39  Score=41.44  Aligned_cols=31  Identities=23%  Similarity=0.246  Sum_probs=28.4

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      -|+|.| +|+-|..++.+|.++|++|.+|.+.
T Consensus         4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            378888 7999999999999999999999874

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=84.85  E-value=0.52  Score=37.49  Aligned_cols=32  Identities=28%  Similarity=0.514  Sum_probs=28.5

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCC-eEEEEeCCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGD-SVIVVDNFF  150 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~l~r~~  150 (340)
                      +|+|.| +|.-|...+..|.++|+ +|+++.+..
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            699999 69999999999999996 799998754

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.66  E-value=0.55  Score=34.66  Aligned_cols=34  Identities=32%  Similarity=0.310  Sum_probs=27.9

Q ss_pred             CCeEEEEcCchHHHHHHHHHHHh----CCCeEEEEeCCC
Q 019470          116 GLRIVVTGGAGFVGSHLVDRLIA----RGDSVIVVDNFF  150 (340)
Q Consensus       116 ~~~vlVtGatG~IG~~l~~~Ll~----~G~~V~~l~r~~  150 (340)
                      .++++|.| .|++|.+++..|.+    .|.+|+.+.+..
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            45899998 59999999998853    588999998754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.52  E-value=0.52  Score=39.87  Aligned_cols=33  Identities=36%  Similarity=0.481  Sum_probs=29.7

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      ..|+|.| +|+-|...+.+|.++|.+|.++++..
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            4799999 59999999999999999999998753

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=83.99  E-value=1  Score=34.05  Aligned_cols=66  Identities=17%  Similarity=0.168  Sum_probs=36.4

Q ss_pred             CeEEEEcCchHHHHH-HHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEcc
Q 019470          117 LRIVVTGGAGFVGSH-LVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLA  188 (340)
Q Consensus       117 ~~vlVtGatG~IG~~-l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~A  188 (340)
                      ++|.|.| +|.+|.. ....|.+. +.+++++............+..   ++.+  .|..+..+.++|+|+-+.
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~---~~~~--~~~~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW---RIPY--ADSLSSLAASCDAVFVHS   69 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH---TCCB--CSSHHHHHTTCSEEEECS
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc---cccc--cccchhhhhhcccccccc
Confidence            4799999 6899975 45556554 5577766543332222222222   1222  233334456799988654

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.46  E-value=1  Score=32.49  Aligned_cols=37  Identities=24%  Similarity=0.257  Sum_probs=30.9

Q ss_pred             CCeEEEEcCc----------hHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          116 GLRIVVTGGA----------GFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       116 ~~~vlVtGat----------G~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      .++|||.|+.          -+-+.+.+++|.+.|++++.+..++..
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeT   50 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPET   50 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhh
Confidence            4589999973          378999999999999999999876543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.26  E-value=0.63  Score=39.10  Aligned_cols=31  Identities=29%  Similarity=0.393  Sum_probs=28.0

Q ss_pred             EEEEcCchHHHHHHHHHHHhCCCeEEEEeCCC
Q 019470          119 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFF  150 (340)
Q Consensus       119 vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~~  150 (340)
                      |+|.| +|.-|...+..|.++|++|+++.+..
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            78899 69999999999999999999998753

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.86  E-value=1  Score=32.86  Aligned_cols=38  Identities=21%  Similarity=0.246  Sum_probs=31.8

Q ss_pred             CCCeEEEEcC----------chHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 019470          115 KGLRIVVTGG----------AGFVGSHLVDRLIARGDSVIVVDNFFTG  152 (340)
Q Consensus       115 ~~~~vlVtGa----------tG~IG~~l~~~Ll~~G~~V~~l~r~~~~  152 (340)
                      +.++|||.|+          --+-+.+.+++|.+.|++++.+..++..
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~T   53 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPAT   53 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTC
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHh
Confidence            4579999998          4477999999999999999999876554

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=82.30  E-value=0.7  Score=38.95  Aligned_cols=32  Identities=31%  Similarity=0.488  Sum_probs=23.7

Q ss_pred             CeEEEEc-Cc-hHH--HHHHHHHHHhCCCeEEEEeC
Q 019470          117 LRIVVTG-GA-GFV--GSHLVDRLIARGDSVIVVDN  148 (340)
Q Consensus       117 ~~vlVtG-at-G~I--G~~l~~~Ll~~G~~V~~l~r  148 (340)
                      |||+|++ || |.+  +..|+++|.++|++|..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            4677765 44 444  55699999999999988764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=82.21  E-value=2.4  Score=33.70  Aligned_cols=73  Identities=8%  Similarity=0.153  Sum_probs=37.7

Q ss_pred             CCCeEEEEcCchHHHH-HHHHHHHhC-CCeEEEEeCCCCCcccccccccCCCceEEeeCcccccccC--CCCEEEEcc
Q 019470          115 KGLRIVVTGGAGFVGS-HLVDRLIAR-GDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--EVDQIYHLA  188 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~-~l~~~Ll~~-G~~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~~D~Vih~A  188 (340)
                      +.-+|.|.| +|.+|. +++..+... +.+|+++....+...+...+.+......+...+-.++.+.  ++|+|+-+.
T Consensus        32 ~~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~t  108 (221)
T d1h6da1          32 RRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL  108 (221)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred             CCEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeecc
Confidence            344899999 689996 566666554 5577765432222222222222212112222222344343  589898654

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.80  E-value=0.38  Score=37.15  Aligned_cols=30  Identities=27%  Similarity=0.361  Sum_probs=24.8

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDN  148 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r  148 (340)
                      +|+|.| +|++|.+++..|.+.|.+|.++.+
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            599999 699999999999999986555433

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=81.42  E-value=0.7  Score=39.89  Aligned_cols=74  Identities=12%  Similarity=0.116  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCchHHHHHHHHHHHhC-CC-eEEEEeCCCCCcccccccccCCCceEEeeCcccccccCCCCEEEEccc
Q 019470          115 KGLRIVVTGGAGFVGSHLVDRLIAR-GD-SVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLAC  189 (340)
Q Consensus       115 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~-~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~D~Vih~Ag  189 (340)
                      ..+++.|+| +|..+.+-++.+.+. +. +|++.+|++..............++++..++..++++.++|+|+-+.+
T Consensus       127 da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         127 NARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA  202 (340)
T ss_dssp             TCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred             CCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccc
Confidence            456899999 788888877777653 44 889998875443322222212346788888888888899999986553

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=80.82  E-value=2.9  Score=32.71  Aligned_cols=89  Identities=18%  Similarity=0.277  Sum_probs=57.1

Q ss_pred             CeEEEEcCchHHHHHHHHHHHhCCC---eEEEEeCCCCCcccccccccCCCceEEeeC----------------------
Q 019470          117 LRIVVTGGAGFVGSHLVDRLIARGD---SVIVVDNFFTGRKENVMHHFGNPNFELIRH----------------------  171 (340)
Q Consensus       117 ~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~l~r~~~~~~~~~~~~~~~~~~~~~~~----------------------  171 (340)
                      +||.|.| -|.-|..++.+|.+.|.   +.++++-..    +.+... . ....+.-+                      
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~----~~L~~~-~-a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e   73 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDL----QVLEAS-N-ADVKIQIGENITRGLGAGGRPEIGEQAALE   73 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCH----HHHHTC-C-CSEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCH----HHHhcC-C-cceEEecccccCCCcccccCchhhHhHHHH
Confidence            3788999 69999999999999765   445554321    111110 0 01111111                      


Q ss_pred             --cccccccCCCCEEEEcccCCCCCCCcCChhhHHHHHHHHHHHHHHHHHHcCCe
Q 019470          172 --DVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR  224 (340)
Q Consensus       172 --D~~~~~~~~~D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~~a~~~~~~  224 (340)
                        +...+.+.++|.||-+||..+.            +.--++..+.+.|++.++-
T Consensus        74 ~~~~I~~~l~~~d~vfi~AGlGGg------------TGtgaapviA~~ake~g~l  116 (194)
T d1w5fa1          74 SEEKIREVLQDTHMVFITAGFGGG------------TGTGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             THHHHHHHTTTCSEEEEEEETTSS------------HHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHhcCCCeEEEEEecCCC------------cccchHHHHHHHHHHcCCc
Confidence              1122346789999999998764            6667788899999999973

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=80.31  E-value=0.74  Score=39.63  Aligned_cols=31  Identities=26%  Similarity=0.324  Sum_probs=28.3

Q ss_pred             eEEEEcCchHHHHHHHHHHHhCCCeEEEEeCC
Q 019470          118 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNF  149 (340)
Q Consensus       118 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~l~r~  149 (340)
                      -|+|.| +|+-|..++.+|.+.|.+|.+|.+.
T Consensus         9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            488999 7999999999999999999999874