Citrus Sinensis ID: 019562

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGYR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHcccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccEEEEEEEEHHHHccccEEEEEEccccccccccccccccccccccccccccccEEEEEEEccccEEEEEEEccccccccEEEccccccccccEEEEEEEEEEEEcccccccccEEEEcccccccccccccccEEEEEEEccccccEEccccEEEEccccHHHHccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccEEcccHHEEccccccccEEEccccccccccccccEEEEccccHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEHHHHHcccEEEEEEccEEEccccccccccccccccccccccccEEEEEEEccccEEEEEEEEccccccccEEEccccccccccEEEEEEEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEEHHHHHHccEEEEEcc
Coil and Loop (DISEMBL)
mpviaspsyvnLKLHLSTsfsfkwnycsgnnrshrrgMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLArkyhpdinkspgaeeKFKEISSAYEvlsddekrsvydrfgeagitgeydglsntsqgvdpfelysaffggsdglfggvgeagginfnfgnkgnfgldirydlhlsfeesifggqrgievscfetcdscggtgakssnciqsckacwgrggvlktqrtpfglisqvstcskcggdgkiiidhcrrcggngevqskrsmkvvippgvsngatmqirgegnfdRRRSLAGDLFVALHvdekqgihrdgLNLFSKISVDYTEAILGtsmevgyr
Flexible Loop (DISEMBL)
mpviaspsyvNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLArkyhpdinkspgaeekFKEISSAyevlsddekrsVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGngevqskrsmkvvippgvsngatmqirgEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAIlgtsmevgyr
Low Complexity Region (SEG)
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAffggsdglfggvgEAgginfnfgnkgnfgLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGYR
Disordered region (IsUnstruct)
*******SYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLA**********************************VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV*******VVI***********I***GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGT*******
Disordered Region (DISOPRED)
****************************************AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT**********QGVDPFELYSAFFGGSDGLF************************YDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ***********SLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGYR
Disordered Region (DISEMBL)
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGYR
Disordered Region (DISPRO)
MPVIASPSYVNLKLHLSTSFSFKWNY*********RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG**S*NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGYR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVIASPSYVNLKLHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGYR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
B8HLD2	374	Chaperone protein DnaJ OS	yes	no	0.840	0.762	0.431	1e-66
Q8DKR7	373	Chaperone protein DnaJ OS	yes	no	0.817	0.742	0.434	1e-64
Q114R3	374	Chaperone protein DnaJ OS	yes	no	0.837	0.759	0.424	7e-63
Q2JW78	394	Chaperone protein DnaJ OS	yes	no	0.837	0.720	0.442	1e-62
B0JW23	374	Chaperone protein DnaJ OS	yes	no	0.837	0.759	0.420	2e-62
Q7VEJ6	378	Chaperone protein DnaJ OS	yes	no	0.834	0.748	0.435	1e-61
B0CAZ0	374	Chaperone protein DnaJ OS	yes	no	0.811	0.735	0.403	1e-61
Q2JH49	394	Chaperone protein DnaJ OS	yes	no	0.828	0.713	0.421	2e-61
Q55505	377	Chaperone protein DnaJ 1	N/A	no	0.843	0.758	0.438	3e-61
B7KEJ8	375	Chaperone protein DnaJ OS	yes	no	0.825	0.746	0.412	4e-61

>sp|B8HLD2|DNAJ_CYAP4 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dnaJ PE=3 SV=1

 Score =  253 bits (646), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/292 (43%), Positives = 182/292 (62%), Gaps = 7/292 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A  +++K +YR+LARKYHPD+NK  GAEE+FKEI+ AYEVLSD E R+ 
Sbjct: 4   DYYDILGVSRDAGQEDLKQAYRRLARKYHPDVNKEAGAEERFKEINRAYEVLSDPETRAR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFGEAG++G   G  +        +++ + F G    FGGVG          ++G+  
Sbjct: 64  YDRFGEAGVSGAAAGYGDMGDMGGFADIFESIFSG----FGGVGAGTSRRRTGPSRGD-- 117

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+R+DL L F E+IFGG++ I ++  ETC +C G+GAK     ++C  C G G V +  
Sbjct: 118 -DLRFDLKLEFREAIFGGEKQIRITHLETCTTCNGSGAKPGTKPRTCGTCGGAGQVRRAT 176

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG  +QVS C  C G G++I D C  CGGNG+ Q  + +K+ IP GV  G  +++  
Sbjct: 177 RTPFGSFTQVSVCPTCNGKGQVIEDKCETCGGNGQAQVTKKLKITIPAGVDTGTRLRVSN 236

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           EG+  ++   AGDL+V L V E     R+G+N+ S++ + Y +AILG+ + V
Sbjct: 237 EGDAGQQGGPAGDLYVYLFVQEDPEFRREGINILSEVKISYLQAILGSRLMV 288

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.
Cyanothece sp. (strain PCC 7425 / ATCC 29141) (taxid: 395961)

>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaJ PE=3 SV=2

 Score =  246 bits (629), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/299 (43%), Positives = 180/299 (60%), Gaps = 22/299 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           D+Y  L V ++A  +E+K +YR+LARKYHPD+NK PGAEEKFKEI+ AYEVLSD + R+ 
Sbjct: 4   DFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARAN 63

Query: 105 YDRFGEAGITGE-YDGLSNTSQG-VDPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNK- 160
           YDRFGEAG++G    G S+   G +  F +++  FFGG               F   ++ 
Sbjct: 64  YDRFGEAGVSGVGAAGFSDFGIGDMGGFADIFETFFGG---------------FTTSSRR 108

Query: 161 ---GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGR 217
                 G D+RYDL L F E++FGG++ I ++  ETC +C GTGAK      +C  C G 
Sbjct: 109 QQGPTRGEDLRYDLKLEFREAVFGGEKEIRINHLETCKTCQGTGAKPGTRPVTCSTCGGV 168

Query: 218 GGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 277
           G V ++ RTPFG  +Q++TC  CGG G +I D C  CGG G +Q  + +K+ IP GV NG
Sbjct: 169 GQVRRSARTPFGSFTQLTTCPTCGGSGVVIEDRCESCGGQGHIQVSKKLKITIPAGVDNG 228

Query: 278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             +++ GEG+   R    GDL+V L V       R+G N+ S+I + Y +AILG  + V
Sbjct: 229 TRLRVSGEGDAGLRGGPPGDLYVYLFVQPDPEFQREGNNILSRIKISYLQAILGCRISV 287

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Thermosynechococcus elongatus (strain BP-1) (taxid: 197221)

>sp|Q114R3|DNAJ_TRIEI Chaperone protein DnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1

 Score =  241 bits (614), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 124/292 (42%), Positives = 176/292 (60%), Gaps = 8/292 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A  +E+K +YR+LARKYHPD+NK PG+EE+FKEI+ AYE+LSD E ++ 
Sbjct: 4   DYYEILGVSRSADKEELKRAYRRLARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKAR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           +DRFGEAG++G      +T       +++ +FF G    FGG G  G            G
Sbjct: 64  FDRFGEAGVSGGAASGFSTDFSDSFADIFESFFSG----FGGAGTQG----RRRTGPVRG 115

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+R DL+L F E+IFGG + + +   ETC +C G+GAK     Q+C  C G G V +  
Sbjct: 116 DDLRLDLNLEFIEAIFGGDKELTIKHLETCGTCNGSGAKPGTKPQTCSTCGGTGQVRRAT 175

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPF   +QVS C  C G G+II + C  CGG G+ ++ + +K+ IP GV NG  +++  
Sbjct: 176 RTPFSSFTQVSVCPSCNGSGQIIEEKCVDCGGRGQKEATKKIKITIPGGVDNGTRLRVSN 235

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           EG+  R     GDL+V L V       RDG+N+ S+I + Y +AILG  +E+
Sbjct: 236 EGDAGRMGGPPGDLYVFLSVKNHPEFQRDGINIISQIKISYLQAILGCCLEI 287

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Trichodesmium erythraeum (strain IMS101) (taxid: 203124)

>sp|Q2JW78|DNAJ_SYNJA Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/296 (44%), Positives = 185/296 (62%), Gaps = 12/296 (4%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++++ +EIK +YR+LARKYHPD+NK PGAE++FKEI+ AYEVLSDDE R+ 
Sbjct: 4   DYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDDELRAR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQ--GVDPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
           YDRFGEAG++G     S      G+  F +L+ +FF    G        GG+ ++   +G
Sbjct: 64  YDRFGEAGLSGAAAAASGFQDFAGIGGFADLFESFFTNFAG--------GGVGYSRSRQG 115

Query: 162 NF-GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
              G D+R+DL L F E+IFGG++ I +S  E C  CGG+GAK    ++ C  C G G V
Sbjct: 116 PVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCPVCGGSGAKPGTDVKVCPTCGGAGQV 175

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
            +  RTPFG  +QVS C  CGG G+++ + C  C G G  Q+ + +++ IP GV +G  +
Sbjct: 176 RRATRTPFGNFTQVSICPTCGGAGRVLEEPCYNCNGEGLAQTTKKLRINIPAGVDSGTRL 235

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           ++ GEG+  RR    GDL+V L V+      RDGL +FS++ V Y +AILG  + V
Sbjct: 236 RVSGEGDAGRRGGPPGDLYVYLFVEPDPDFQRDGLTIFSQVRVSYLQAILGAKVLV 291

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain JA-3-3Ab) (taxid: 321327)

>sp|B0JW23|DNAJ_MICAN Chaperone protein DnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 174/295 (58%), Gaps = 11/295 (3%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           TDYY  L V ++A  ++IK +YR+LARKYHPD+NK PGAEE FKEI+ AYE+LS+ E R+
Sbjct: 3   TDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRN 62

Query: 104 VYDRFGEAGITGEYDGLSNTSQG--VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
            YDRFGEAG++G   G    + G   D FE   + FGG  G        G          
Sbjct: 63  RYDRFGEAGVSGGAAGFDPDNMGGFADIFETIFSGFGGMGGQATARRRTGPTR------- 115

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D+R D  L F E++FGG++ I +   ETC +C G+GA+     ++C  C G G V 
Sbjct: 116 --GEDLRLDFRLKFREAVFGGEKEIRIRHLETCQTCKGSGARPGTSSRTCTTCSGTGQVR 173

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           +  RTPFG  +QVS C  C G G++I + C  CGG+G  Q  + +K+ IP GV NG  ++
Sbjct: 174 RATRTPFGTFAQVSVCPTCDGAGEVIEEKCDVCGGSGRRQETKKLKITIPAGVDNGMKLR 233

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +  EG+   +    GDLFV L V+      R+G ++ S I++ Y +AILG +++V
Sbjct: 234 VAREGDAGLKGGPPGDLFVYLTVETDAEFQREGNDIKSDITISYIQAILGCTIKV 288

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Microcystis aeruginosa (strain NIES-843) (taxid: 449447)

>sp|Q7VEJ6|DNAJ_PROMA Chaperone protein DnaJ OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=dnaJ PE=3 SV=1

 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 128/294 (43%), Positives = 174/294 (59%), Gaps = 11/294 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           D+Y TL V +NA    +K +YR+LAR+YHPDINK  GAEE+FKEI  AYEVL D EKR+ 
Sbjct: 3   DFYDTLGVNRNADADSLKRAYRRLARQYHPDINKEAGAEERFKEIGRAYEVLGDPEKRAR 62

Query: 105 YDRFGEAGITGE--YDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           YD+FGEAG+ G      + +     D FE + + FGG           G           
Sbjct: 63  YDQFGEAGLGGSAGMPDMGDMGGFADIFETFFSGFGGPGSSGARTQRRGPQQ-------- 114

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+RYDL + F +++FG +R I++   ETCD C GTGAK      +C  C G G V +
Sbjct: 115 -GDDLRYDLTIDFNQAVFGQEREIKIPHLETCDVCRGTGAKPGTGPTTCSTCGGAGQVRR 173

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RTPFG  +QVS C  C G G++I D C+ CGG G  Q ++ +++ IP GV  G  +++
Sbjct: 174 ATRTPFGSFTQVSDCPTCSGSGQVISDSCQSCGGQGVKQVRKKLRINIPAGVDTGTRLRV 233

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            GEGN   R   +GDL+V L V     + RDGLN+ S+++V Y +AILG ++EV
Sbjct: 234 SGEGNAGPRGGPSGDLYVFLKVKSHARLKRDGLNIHSEVNVSYLQAILGDTIEV 287

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) (taxid: 167539)

>sp|B0CAZ0|DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=1

 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 27/302 (8%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A   E+K SYR+LARKYHPD+NK PGAE+KFKEI+ AYE LSD + R  
Sbjct: 4   DYYDILGVSRSADPDELKRSYRRLARKYHPDVNKEPGAEDKFKEINKAYETLSDPQMRGR 63

Query: 105 YDRFGEAGIT----------GEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGIN 154
           YD+FGEAG++          G++ G ++         ++  FF G    FGG  ++G   
Sbjct: 64  YDQFGEAGVSSAAGAGYQDFGDFGGFAD---------IFETFFSG----FGGSPQSGRRR 110

Query: 155 FNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKAC 214
                    G D+R+DL L F E++FGG++ I +S  E+C +C GTGAK     Q+C  C
Sbjct: 111 SGPAR----GEDLRFDLKLKFREAVFGGEQQIRISHLESCKTCEGTGAKPGTRPQTCSTC 166

Query: 215 WGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV 274
            G G V +  RTP G  +QVS C  C G G+++ + C  CGG G+ Q  + +++ IP GV
Sbjct: 167 QGSGQVRRMTRTPLGNFTQVSVCPTCNGQGQVVTEKCDSCGGRGQNQVSKKLQIKIPAGV 226

Query: 275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSM 334
             G  +++  EG+  ++    GDL+V L V E     RDG N+ S+  + Y +AILG  +
Sbjct: 227 DTGTRLRVSNEGDAGQKGGPPGDLYVYLFVQEDSEFRRDGTNVLSEFKISYLQAILGAQL 286

Query: 335 EV 336
            V
Sbjct: 287 PV 288

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Acaryochloris marina (strain MBIC 11017) (taxid: 329726)

>sp|Q2JH49|DNAJ_SYNJB Chaperone protein DnaJ OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=dnaJ PE=3 SV=1

 Score =  236 bits (602), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 18/299 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++++ +EIK +YR+LARKYHPD+NK PGAEE+FKEI+ AYEVLSD+E ++ 
Sbjct: 4   DYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSDNELKAR 63

Query: 105 YDRFGEAGITGE------YDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG 158
           YDRFGEAG++G       +   +      D FE +   F G+           G ++   
Sbjct: 64  YDRFGEAGLSGAAAAASGFQDFAGMGGFADIFESFFTNFAGA-----------GASYARS 112

Query: 159 NKGNF-GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGR 217
            +G   G D+R+DL L F E+IFGG++ I +S  E C+ CGG+GAK    +++C  C G 
Sbjct: 113 RQGPVRGDDLRFDLKLEFLEAIFGGEKQIRISHLEVCNVCGGSGAKPGTEVKTCPTCGGS 172

Query: 218 GGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG 277
           G V +  RTPFG  +QVS C  CGG G+++ + C  C G G  Q+ + +++ IP GV +G
Sbjct: 173 GQVRRATRTPFGNFTQVSVCPTCGGSGQVLEEPCYNCNGEGLAQTTKKLRINIPAGVDSG 232

Query: 278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             +++ GEG+  RR    GDL+V L V+      RDGL + S++ V Y +AILG  + V
Sbjct: 233 TRLRVSGEGDAGRRGGPPGDLYVYLFVEPDPDFQRDGLTILSEVRVSYLQAILGAKVSV 291

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechococcus sp. (strain JA-2-3B'a(2-13)) (taxid: 321332)

>sp|Q55505|DNAJ1_SYNY3 Chaperone protein DnaJ 1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dnaJ1 PE=3 SV=1

 Score =  236 bits (601), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 129/294 (43%), Positives = 175/294 (59%), Gaps = 8/294 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY TL V ++A   EIK +YR+LARKYHPD+NK PGAEEKFKEI+ AYEVLS+ E R  
Sbjct: 4   DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQR 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFEL--YSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           YD+FGEAG++G        +QG D   +  ++  F    G FGG            N   
Sbjct: 64  YDQFGEAGVSG------GGAQGFDVGNMGDFADIFETIFGGFGGGMGGQQRGRRRANGPT 117

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+R DL L+F+E+IFGG++ I +   E+C  C GTGAK    +++C  C G G V +
Sbjct: 118 RGDDLRLDLQLTFQEAIFGGEKEIRIPHLESCQVCEGTGAKPGTGVKTCGTCNGAGQVRR 177

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RTPFG  +QVS C  C G G++I   C  C G G  Q  + +K+ IP GV +G  +++
Sbjct: 178 ATRTPFGSFAQVSACPTCNGSGEVIEQKCEACNGVGRKQETKKLKITIPAGVDDGTRLRV 237

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             EG+   R   AGDL+V L V+  +   R+G+N+ S + V Y +AILG  +EV
Sbjct: 238 GKEGDAGLRGGPAGDLYVFLMVETDKHFVREGMNIRSNLEVSYLQAILGCRLEV 291

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1

 Score =  235 bits (599), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 123/298 (41%), Positives = 176/298 (59%), Gaps = 18/298 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A   EIK +YR+LARKYHPD+NK  GAEE+FKEI+ AYE+LS+ E R+ 
Sbjct: 4   DYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRAR 63

Query: 105 YDRFGEAGITG------EYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG 158
           YDRFGEAG++       EY  +   +      +++   F G    FGG+G         G
Sbjct: 64  YDRFGEAGVSSGAGSGFEYGDMGGIA------DIFETIFSG----FGGMGTGTSSRRRTG 113

Query: 159 NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRG 218
                G D+R D  L+F E++FGG++ I +   ETC  C G+GAK     ++C  C G G
Sbjct: 114 PV--RGDDLRLDFKLNFREAVFGGEKEIRIRHLETCQVCEGSGAKPGTGSRTCSTCSGSG 171

Query: 219 GVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            V +  RTPFG  +QVS C  C G G++I + C  CGG+G  Q  + +K+ IP GV NG 
Sbjct: 172 QVRRATRTPFGTFAQVSVCPTCNGSGEVIEEKCEACGGSGRKQETKKLKITIPAGVDNGT 231

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            +++  EG+  +R    GDL+V L V+  +   R+G+++ S+IS+ Y +AILG  + V
Sbjct: 232 RLRVSREGDAGQRGGPPGDLYVYLSVETDEEFQREGIDIKSEISISYLQAILGCRLSV 289

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.

Cyanothece sp. (strain PCC 7424) (taxid: 65393)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
255577342	433	chaperone protein DNAj, putative [Ricinu	0.985	0.771	0.668	1e-132
297734356	589	unnamed protein product [Vitis vinifera]	0.961	0.553	0.672	1e-123
356522869	525	PREDICTED: chaperone protein DnaJ-like [	0.914	0.590	0.697	1e-123
359491526	497	PREDICTED: chaperone protein DnaJ-like [	0.961	0.655	0.672	1e-123
224135637	419	predicted protein [Populus trichocarpa]	0.861	0.696	0.736	1e-117
297830416	518	DNAJ heat shock family protein [Arabidop	0.893	0.584	0.673	1e-109
42564975	517	molecular chaperone Hsp40/DnaJ family pr	0.893	0.586	0.673	1e-109
9294487	438	DnaJ homolog [Arabidopsis thaliana]	0.893	0.691	0.673	1e-109
414865579	705	TPA: hypothetical protein ZEAMMB73_81960	0.861	0.414	0.578	5e-95
294461414	508	unknown [Picea sitchensis]	0.923	0.616	0.483	1e-83

>gi|255577342|ref|XP_002529551.1| chaperone protein DNAj, putative [Ricinus communis] gi|223530963|gb|EEF32820.1| chaperone protein DNAj, putative [Ricinus communis]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/353 (66%), Positives = 282/353 (79%), Gaps = 19/353 (5%)

Query: 1   MPVIASPSYVNLK---------------LHLSTSFSFKWNYCSGNNRSHR--RGMIRAAG 43
           MP I  P Y NLK                H   S  F  ++   N +  R    +IRAA 
Sbjct: 1   MPAIQIPCYANLKSTFKPSSIPKSSISFCHGKVSLQFSSSFFRKNGKDRRCCNCVIRAAA 60

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           TD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK PGAEEKFKEIS+AYEVLSDDEKRS
Sbjct: 61  TDHYSTLNVDRNATLQEIKSSYRKLARKYHPDLNKGPGAEEKFKEISAAYEVLSDDEKRS 120

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
           +YDRFGEAG+ GEYDG S+ SQG+DPF++Y+AFFG SDG FGG+GEAGGI FN  N G  
Sbjct: 121 LYDRFGEAGLQGEYDG-SSGSQGMDPFDIYNAFFGDSDGFFGGMGEAGGIKFNMRNTGK- 178

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
            LDIRY+L++SFEESIFGGQ+ IE SCFETCD CGGTGAKSS+ I+SC  C GRGGV+KT
Sbjct: 179 DLDIRYNLNVSFEESIFGGQQEIEFSCFETCDKCGGTGAKSSSSIKSCADCGGRGGVMKT 238

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
           QRTPFG++SQVSTCSKC GDGK+I DHC++CGGNG V +KRS+K+VIPPG+S+GA M+I+
Sbjct: 239 QRTPFGMMSQVSTCSKCNGDGKLITDHCQKCGGNGNVSTKRSIKIVIPPGISDGALMRIQ 298

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           GEGNFD++R +AGDL++ LH++EK GI RDGLNL+SKISVDYT AILGT ++V
Sbjct: 299 GEGNFDKKRGIAGDLYITLHINEKHGIWRDGLNLYSKISVDYTRAILGTVIKV 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734356|emb|CBI15603.3| unnamed protein product [Vitis vinifera]

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/339 (67%), Positives = 278/339 (82%), Gaps = 13/339 (3%)

Query: 1   MPVIASPSYVNLKLHLSTSFSF---KWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNAT 57
           +P+  SP   N  L  +T F     KW          R G+IRAA +DYYSTLNV +N+T
Sbjct: 5   LPISKSPLISNSALPFNT-FRLRPPKW---------RRWGVIRAARSDYYSTLNVSRNST 54

Query: 58  LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY 117
           L+EIK+SYRKLARKYHPD+NKSPGAEEKFKEIS+AYEVLSDDEKRS+YDRFGEAG+ GEY
Sbjct: 55  LKEIKSSYRKLARKYHPDLNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLEGEY 114

Query: 118 DGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEE 177
           D  +  S+GVDPF+ + AFF  S+G FG  GE GG+NFN  +KGN GLD+RYDL LSFEE
Sbjct: 115 DRSNGGSKGVDPFDFFDAFFDESNGPFGRWGEPGGMNFNSRSKGNQGLDVRYDLFLSFEE 174

Query: 178 SIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTC 237
           SIFG Q  IEVSCFE CD+CGGTGAKSS+CI++C  C G+GGV+KTQ+TPFG++SQVSTC
Sbjct: 175 SIFGKQEEIEVSCFEVCDNCGGTGAKSSSCIKTCTNCGGKGGVMKTQKTPFGIMSQVSTC 234

Query: 238 SKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGD 297
           SKCGGDGKII  HC+ CGG+G+VQSK+S++V+IPPGVS+GATMQ+RG+GNFD++R +AGD
Sbjct: 235 SKCGGDGKIITSHCQSCGGHGKVQSKQSIEVIIPPGVSDGATMQVRGKGNFDKKRGMAGD 294

Query: 298 LFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           L++ LHV+EK GI RDGLNL+SK++VDYTEAILGT  +V
Sbjct: 295 LYLVLHVNEKHGIWRDGLNLYSKVNVDYTEAILGTVKKV 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522869|ref|XP_003530065.1| PREDICTED: chaperone protein DnaJ-like [Glycine max]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/314 (69%), Positives = 264/314 (84%), Gaps = 4/314 (1%)

Query: 24  WNYCSGNNRSHRRGMIRA-AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA 82
           + + +  NRS R  ++RA AGTDYYSTLNV  NATLQEIK SYRKLARKYHPD+NKSPGA
Sbjct: 46  FRFSTARNRS-RAAVVRAKAGTDYYSTLNVGPNATLQEIKASYRKLARKYHPDMNKSPGA 104

Query: 83  EEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDG 142
           E+KFKEIS+AYEVLSDDEKRS+YDRFGE+G+ G+ +G S  + GVDPF+L+  FFG SDG
Sbjct: 105 EDKFKEISAAYEVLSDDEKRSLYDRFGESGLQGD-NGGSTGAPGVDPFDLFDTFFGRSDG 163

Query: 143 LFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGA 202
           +FG VG+ G  NFNF NK N   DIRYDLHLSFEESIFGGQR IEVSCF+TC+ C GTGA
Sbjct: 164 VFG-VGDEGSFNFNFRNKRNHVHDIRYDLHLSFEESIFGGQREIEVSCFQTCNMCDGTGA 222

Query: 203 KSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQS 262
           KS NCI+ C  C GRGG +KTQRTPFG++SQVSTCSKCGG GKII D CRRC G+G+VQS
Sbjct: 223 KSKNCIKQCTNCGGRGGEMKTQRTPFGMMSQVSTCSKCGGLGKIITDQCRRCDGSGQVQS 282

Query: 263 KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS 322
           K++M+V IPPGV++G TMQI+G+GNFD++R + GDL+V LHVDEKQGI R+GL+L+SKIS
Sbjct: 283 KQTMEVEIPPGVNDGDTMQIQGQGNFDKKRQITGDLYVVLHVDEKQGIWREGLHLYSKIS 342

Query: 323 VDYTEAILGTSMEV 336
           +D+T+AILG+  +V
Sbjct: 343 IDFTDAILGSVKKV 356

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491526|ref|XP_002279102.2| PREDICTED: chaperone protein DnaJ-like [Vitis vinifera]

 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/339 (67%), Positives = 278/339 (82%), Gaps = 13/339 (3%)

Query: 1   MPVIASPSYVNLKLHLSTSFSF---KWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNAT 57
           +P+  SP   N  L  +T F     KW          R G+IRAA +DYYSTLNV +N+T
Sbjct: 5   LPISKSPLISNSALPFNT-FRLRPPKW---------RRWGVIRAARSDYYSTLNVSRNST 54

Query: 58  LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEY 117
           L+EIK+SYRKLARKYHPD+NKSPGAEEKFKEIS+AYEVLSDDEKRS+YDRFGEAG+ GEY
Sbjct: 55  LKEIKSSYRKLARKYHPDLNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLEGEY 114

Query: 118 DGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEE 177
           D  +  S+GVDPF+ + AFF  S+G FG  GE GG+NFN  +KGN GLD+RYDL LSFEE
Sbjct: 115 DRSNGGSKGVDPFDFFDAFFDESNGPFGRWGEPGGMNFNSRSKGNQGLDVRYDLFLSFEE 174

Query: 178 SIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTC 237
           SIFG Q  IEVSCFE CD+CGGTGAKSS+CI++C  C G+GGV+KTQ+TPFG++SQVSTC
Sbjct: 175 SIFGKQEEIEVSCFEVCDNCGGTGAKSSSCIKTCTNCGGKGGVMKTQKTPFGIMSQVSTC 234

Query: 238 SKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGD 297
           SKCGGDGKII  HC+ CGG+G+VQSK+S++V+IPPGVS+GATMQ+RG+GNFD++R +AGD
Sbjct: 235 SKCGGDGKIITSHCQSCGGHGKVQSKQSIEVIIPPGVSDGATMQVRGKGNFDKKRGMAGD 294

Query: 298 LFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           L++ LHV+EK GI RDGLNL+SK++VDYTEAILGT  +V
Sbjct: 295 LYLVLHVNEKHGIWRDGLNLYSKVNVDYTEAILGTVKKV 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135637|ref|XP_002322123.1| predicted protein [Populus trichocarpa] gi|222869119|gb|EEF06250.1| predicted protein [Populus trichocarpa]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/292 (73%), Positives = 260/292 (89%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYYSTLNV +NATLQEIK+SYRKLARKYHPD+NK  GAE+KFKEIS+AYEVLSDDEKRS+
Sbjct: 74  DYYSTLNVSRNATLQEIKSSYRKLARKYHPDMNKGAGAEDKFKEISAAYEVLSDDEKRSL 133

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFGEAG+ GE+DG  + SQ VDPFE+Y+ FFGGSDG FGG G  G +NFNF N GN  
Sbjct: 134 YDRFGEAGLQGEFDGSGSGSQEVDPFEIYNTFFGGSDGFFGGRGGDGVLNFNFRNMGNQD 193

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
           LDIRYDL+LS EES+FGGQR IEVS FETCDSC GTGAKSS+CI+SC  C GRGGV+KTQ
Sbjct: 194 LDIRYDLYLSLEESVFGGQREIEVSFFETCDSCSGTGAKSSSCIKSCADCGGRGGVVKTQ 253

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG++SQVSTC+KC G+G++I DHCR+CGGNG+++SKRSMKVV P GV++GATM+I+G
Sbjct: 254 RTPFGMMSQVSTCAKCSGEGEVITDHCRKCGGNGKIRSKRSMKVVFPAGVNDGATMRIQG 313

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           EG+F+++R +AGDLF++LHV+EKQGI R+GLNL+SKI+VDYT+AILGT ++V
Sbjct: 314 EGSFNKKRGIAGDLFISLHVNEKQGIWRNGLNLYSKINVDYTQAILGTVLKV 365

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830416|ref|XP_002883090.1| DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] gi|297328930|gb|EFH59349.1| DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/303 (67%), Positives = 256/303 (84%)

Query: 34  HRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
            RR +I AAG D+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK+IS+AY
Sbjct: 52  RRRVIIMAAGKDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAY 111

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGI 153
           EVLSD+EKRSVYDRFGEAG+  +++G  +TS GVDPF+LYSAFFGGSDG FG +GE+GG+
Sbjct: 112 EVLSDEEKRSVYDRFGEAGLERDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGEMGESGGM 171

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
            F+F NK +  LDIR DL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN I+ C +
Sbjct: 172 GFDFMNKRSLDLDIRCDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNAIKQCSS 231

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G+G V+ +QRTPFG++SQVSTCSKCGG+GKII D CR+C GNG ++S++ M VV+PPG
Sbjct: 232 CDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKIITDKCRKCIGNGRLRSRKKMDVVVPPG 291

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
           VS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+AILG +
Sbjct: 292 VSDRATMRIQGEGNVDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGVT 351

Query: 334 MEV 336
            +V
Sbjct: 352 TKV 354

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42564975|ref|NP_188410.2| molecular chaperone Hsp40/DnaJ family protein [Arabidopsis thaliana] gi|115646890|gb|ABJ17154.1| At3g17830 [Arabidopsis thaliana] gi|332642491|gb|AEE76012.1| molecular chaperone Hsp40/DnaJ family protein [Arabidopsis thaliana]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/303 (67%), Positives = 257/303 (84%)

Query: 34  HRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
            RR +  AAGTD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK+IS+AY
Sbjct: 52  RRRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAY 111

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGI 153
           EVLSD+EKRS YDRFGEAG+ G+++G  +TS GVDPF+LYSAFFGGSDG FGG+GE+GG+
Sbjct: 112 EVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMGESGGM 171

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
            F+F NK +  LDIRYDL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN I+ C +
Sbjct: 172 GFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNSIKQCSS 231

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G+G V+ +QRTPFG++SQVSTCSKCGG+GK I D CR+C GNG +++++ M VV+PPG
Sbjct: 232 CDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMDVVVPPG 291

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
           VS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+AILG +
Sbjct: 292 VSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGAT 351

Query: 334 MEV 336
            +V
Sbjct: 352 TKV 354

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9294487|dbj|BAB02706.1| DnaJ homolog [Arabidopsis thaliana]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/303 (67%), Positives = 257/303 (84%)

Query: 34  HRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
            RR +  AAGTD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK+IS+AY
Sbjct: 52  RRRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFKQISAAY 111

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGI 153
           EVLSD+EKRS YDRFGEAG+ G+++G  +TS GVDPF+LYSAFFGGSDG FGG+GE+GG+
Sbjct: 112 EVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGMGESGGM 171

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
            F+F NK +  LDIRYDL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN I+ C +
Sbjct: 172 GFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNSIKQCSS 231

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G+G V+ +QRTPFG++SQVSTCSKCGG+GK I D CR+C GNG +++++ M VV+PPG
Sbjct: 232 CDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMDVVVPPG 291

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
           VS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+AILG +
Sbjct: 292 VSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTDAILGAT 351

Query: 334 MEV 336
            +V
Sbjct: 352 TKV 354

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414865579|tpg|DAA44136.1| TPA: hypothetical protein ZEAMMB73_819602 [Zea mays]

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 169/292 (57%), Positives = 226/292 (77%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+TLN+R+++TLQEIK++YR LARKYHPD+NKSP AEEKFKEIS+AYEVLSD +KRS+
Sbjct: 85  DYYATLNIRRDSTLQEIKSAYRILARKYHPDMNKSPEAEEKFKEISAAYEVLSDQDKRSL 144

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDRFGE G++G+Y      + G+DP+EL++AFFG SD LFG    +GG +++   K N  
Sbjct: 145 YDRFGEEGLSGDYRNGDIGTHGIDPYELFNAFFGSSDKLFGDSMGSGGFHYSAEAKDNRA 204

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
           L+I Y+L LSFEESI GG+R I V   ETC +C GTGAK SN I  C  C G+G ++KTQ
Sbjct: 205 LNISYNLLLSFEESILGGKREINVFRHETCGTCHGTGAKCSNDITECTRCRGQGRLMKTQ 264

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
           RTPFG++SQ+S+C  C G GK+I +HC  C G+G VQ +R +KV IP G+ +G+T++I G
Sbjct: 265 RTPFGIVSQISSCLNCEGSGKVITEHCTECYGSGRVQIERIIKVDIPGGIDDGSTIRISG 324

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            GN D++R  +GDL++ + V++KQGIHRDGLNL+S  SVDYT+ ILGT+++V
Sbjct: 325 GGNVDKQRGASGDLYIFVRVNKKQGIHRDGLNLYSDASVDYTDVILGTTVKV 376

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294461414|gb|ADE76268.1| unknown [Picea sitchensis]

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/327 (48%), Positives = 223/327 (68%), Gaps = 14/327 (4%)

Query: 14  LHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYH 73
           L  +   S+ +NY   + R+HR        +DYY+TL V ++A  +EIK++YR+LAR+YH
Sbjct: 58  LWRNAKLSYDFNYTHRHRRAHR---FVCMASDYYATLGVSKSANTKEIKSAYRRLARQYH 114

Query: 74  PDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELY 133
           PD+NK PGA +KFKEIS+AYEVLSDDEKRS+YD++GE G+ G     S+ +   +PF+L+
Sbjct: 115 PDVNKDPGATDKFKEISTAYEVLSDDEKRSLYDQYGEVGVKGA--AASSGAYTTNPFDLF 172

Query: 134 SAFFGGSDGLFGGVGEAGGINFNFGNKGN----FGLDIRYDLHLSFEESIFGGQRGIEVS 189
             FFG +   F G+ + G     FG +       G DIRYD+ L F E++FG ++  EV 
Sbjct: 173 ETFFGSNVRGFPGMDQTG-----FGARRRETVFQGDDIRYDMMLEFLEAVFGAEKEFEVF 227

Query: 190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID 249
             E C+SC GTGAK  +  ++C  C GRG V++TQ TPFGL SQVS CS+CGG+G++I D
Sbjct: 228 HLEACNSCNGTGAKFGSRPKTCSTCGGRGQVMRTQETPFGLFSQVSICSECGGEGEVISD 287

Query: 250 HCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG 309
           +CR C G G ++ K+ +KV +PPGV++G+T+++RGEG+   +   AGDL+V L+V E  G
Sbjct: 288 YCRTCAGEGRIRVKKDLKVKVPPGVNSGSTLRVRGEGDAGPKGGPAGDLYVYLNVKEIPG 347

Query: 310 IHRDGLNLFSKISVDYTEAILGTSMEV 336
           I RDG+NL+S ISV Y +AILGT  +V
Sbjct: 348 IERDGINLYSTISVSYVDAILGTVSKV 374

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2088585	517	AT3G17830 [Arabidopsis thalian	0.905	0.593	0.614	1.4e-101
TAIR|locus:2016234	500	AT1G80030 [Arabidopsis thalian	0.938	0.636	0.445	1.1e-73
TAIR|locus:2140035	447	AT4G39960 [Arabidopsis thalian	0.893	0.677	0.418	1e-61
TAIR|locus:2041258	442	AT2G22360 [Arabidopsis thalian	0.873	0.669	0.426	9e-61
TIGR_CMR|CHY_0416	381	CHY_0416 "chaperone protein dn	0.849	0.755	0.393	5.1e-51
TIGR_CMR|BA_4538	371	BA_4538 "chaperone protein dna	0.837	0.765	0.352	4.1e-49
TIGR_CMR|DET_1398	356	DET_1398 "co-chaperone protein	0.504	0.480	0.327	3.3e-47
UNIPROTKB|P95830	378	dnaJ "Chaperone protein DnaJ"	0.846	0.759	0.341	3.8e-46
TIGR_CMR|GSU_0034	373	GSU_0034 "chaperone protein dn	0.492	0.447	0.339	4.7e-46
UNIPROTKB|Q47XI7	378	dnaJ "Chaperone protein DnaJ"	0.492	0.441	0.345	7.6e-46

TAIR|locus:2088585 AT3G17830 [Arabidopsis thaliana (taxid:3702)]

 Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
 Identities = 190/309 (61%), Positives = 239/309 (77%)

Query:    28 SGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFK 87
             SG  R  RR +  AAGTD+YSTLNV +NATLQEIK+SYRKLARKYHPD+NK+PGAE+KFK
Sbjct:    48 SGGYR--RRVITMAAGTDHYSTLNVNRNATLQEIKSSYRKLARKYHPDMNKNPGAEDKFK 105

Query:    88 EISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXX 147
             +IS+AYEVLSD+EKRS YDRFGEAG+ G+++G  +TS GVDPF+LYSA            
Sbjct:   106 QISAAYEVLSDEEKRSAYDRFGEAGLEGDFNGSQDTSPGVDPFDLYSAFFGGSDGFFGGM 165

Query:   148 XEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNC 207
              E+              LDIRYDL LSFEE++FG +R IEVS  ETCD CGGTGAKSSN 
Sbjct:   166 GESGGMGFDFMNKRSLDLDIRYDLRLSFEEAVFGVKREIEVSYLETCDGCGGTGAKSSNS 225

Query:   208 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMK 267
             I+ C +C G+G V+ +QRTPFG++SQVSTCSKCGG+GK I D CR+C GNG +++++ M 
Sbjct:   226 IKQCSSCDGKGRVMNSQRTPFGIMSQVSTCSKCGGEGKTITDKCRKCIGNGRLRARKKMD 285

Query:   268 VVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTE 327
             VV+PPGVS+ ATM+I+GEGN D+R   AGDLF+ L VDEK+GI R+GLNL+S I++D+T+
Sbjct:   286 VVVPPGVSDRATMRIQGEGNMDKRSGRAGDLFIVLQVDEKRGIRREGLNLYSNINIDFTD 345

Query:   328 AILGTSMEV 336
             AILG + +V
Sbjct:   346 AILGATTKV 354

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2016234 AT1G80030 [Arabidopsis thaliana (taxid:3702)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 144/323 (44%), Positives = 209/323 (64%)

Query:    14 LHLSTSFSFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYH 73
             L LS+S S    Y    NR  R  ++ A   DYY+TL V ++A  +EIK +YR+LAR+YH
Sbjct:    47 LSLSSSSSSSTPY---RNRRGRSLVVFATSGDYYATLGVSKSANNKEIKAAYRRLARQYH 103

Query:    74 PDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELY 133
             PD+NK PGA EKFKEIS+AYEVLSD++KR++YD++GEAG+     G S      +PF+L+
Sbjct:   104 PDVNKEPGATEKFKEISAAYEVLSDEQKRALYDQYGEAGVKSTVGGASGPYTS-NPFDLF 162

Query:   134 SAXXXXXXXXXXXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFET 193
                            +A               D+RYD+ L   E+IFG ++  +++  ET
Sbjct:   163 ETFFGASMGGFPGMDQADFGRTRRSRVTKGE-DLRYDITLELSEAIFGSEKEFDLTHLET 221

Query:   194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 253
             C++C GTGAK+ + ++ C  C GRG V++T++TPFG+ SQVS C  CGGDG++I ++CR+
Sbjct:   222 CEACAGTGAKAGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSICPNCGGDGEVISENCRK 281

Query:   254 CGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD 313
             C G G V+ K+S+KV IPPGVS G+ +++ GEG+   R    GDL+V L V++ +GI RD
Sbjct:   282 CSGEGRVRIKKSIKVKIPPGVSAGSILRVAGEGDSGPRGGPPGDLYVYLDVEDVRGIERD 341

Query:   314 GLNLFSKISVDYTEAILGTSMEV 336
             G+NL S +S+ Y +AILG  ++V
Sbjct:   342 GINLLSTLSISYLDAILGAVVKV 364

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

TAIR|locus:2140035 AT4G39960 [Arabidopsis thaliana (taxid:3702)]

 Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
 Identities = 130/311 (41%), Positives = 183/311 (58%)

Query:    28 SGNNRSHR--RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEK 85
             S N  S R  R  +RA  TD+YS L V +NAT  EIK++YRKLAR YHPD+NK  GAE+K
Sbjct:    67 SPNTHSRRGARFTVRA-DTDFYSVLGVSKNATKAEIKSAYRKLARSYHPDVNKDAGAEDK 125

Query:    86 FKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXX 145
             FKEIS+AYE+LSDDEKRS+YDR+GEAG+ G   G+       +PF+L+ +          
Sbjct:   126 FKEISNAYEILSDDEKRSLYDRYGEAGVKGA--GMGGMGDYSNPFDLFESLFEGMGGMGG 183

Query:   146 XXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSS 205
                                 D  Y L L+F+E++FG ++ IE+S  E+C +C G+GAK+ 
Sbjct:   184 MGGGMGSRGSRSRAIDGE--DEYYSLILNFKEAVFGIEKEIEISRLESCGTCNGSGAKAG 241

Query:   206 NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRS 265
                  CK C G+G V+ + RTP G+  QV TCS C G G+I    C  C G+G V+  + 
Sbjct:   242 TKPTKCKTCGGQGQVVASTRTPLGVFQQVMTCSPCNGTGEIS-KPCGACSGDGRVRRTKR 300

Query:   266 MKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDY 325
             + + +P GV +G+ +++RGEGN  +R    GDLF  + V     + RD  N+     + Y
Sbjct:   301 ISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFAVIEVIPDPVLKRDDTNILYTCKISY 360

Query:   326 TEAILGTSMEV 336
              +AILGT+++V
Sbjct:   361 VDAILGTTLKV 371

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TAIR|locus:2041258 AT2G22360 [Arabidopsis thaliana (taxid:3702)]

 Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
 Identities = 133/312 (42%), Positives = 182/312 (58%)

Query:    28 SGNNRSHRRGM---IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEE 84
             S N    RRG    +RA   DYYS L V +NAT  EIK++YRKLAR YHPD+NK PGAEE
Sbjct:    67 SRNMHPPRRGSRFTVRA-DADYYSVLGVSKNATKAEIKSAYRKLARNYHPDVNKDPGAEE 125

Query:    85 KFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXX 144
             KFKEIS+AYEVLSDDEK+S+YDR+GEAG+ G   G  N     +PF+L+ +         
Sbjct:   126 KFKEISNAYEVLSDDEKKSLYDRYGEAGLKGAA-GFGNGDFS-NPFDLFDSLFEGFGGGM 183

Query:   145 XXXXEAXXXXXXXXXXXXXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKS 204
                  +               D  Y L L+F+E++FG ++ IE+S  E+C +C G+GAK 
Sbjct:   184 GRGSRSRAVDGQ---------DEYYTLILNFKEAVFGMEKEIEISRLESCGTCEGSGAKP 234

Query:   205 SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKR 264
                   C  C G+G V+   RTP G+  QV TCS C G G+I    C  C G+G V+  +
Sbjct:   235 GTKPTKCTTCGGQGQVVSAARTPLGVFQQVMTCSSCNGTGEISTP-CGTCSGDGRVRKTK 293

Query:   265 SMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD 324
              + + +P GV +G+ +++RGEGN  +R    GDLFV + V     + RD  N+     + 
Sbjct:   294 RISLKVPAGVDSGSRLRVRGEGNAGKRGGSPGDLFVVIEVIPDPILKRDDTNILYTCKIS 353

Query:   325 YTEAILGTSMEV 336
             Y +AILGT+++V
Sbjct:   354 YIDAILGTTLKV 365

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

TIGR_CMR|CHY_0416 CHY_0416 "chaperone protein dnaJ" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
 Identities = 116/295 (39%), Positives = 162/295 (54%)

Query:    45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRS 103
             DYY  L V +NAT +EIK +YRKLARKYHPD+NK  P A EKFKEI+ AYEVLSD EKR+
Sbjct:     4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRA 63

Query:   104 VYDRFGEAGITGEYDGLSNTSQGVD-PFE-LYSAXXXXXXXXXXXXXEAXXXXXXXXXXX 161
              YD+FG AG+ G + G      G    FE ++S                           
Sbjct:    64 RYDQFGHAGVDGNFAGQGGFGGGAGINFEDIFSGFGGFGDLFDMVFGSGRKARQGPVPGD 123

Query:   162 XXXLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
                 DI   L L+ EE++FGG++ + V+  ETC  C G GA+    I +C  C GRG + 
Sbjct:   124 ----DIEAVLELTLEEAVFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQIH 179

Query:   222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
             +  +T FG + +   CS C G+GKI    CR CGG+G V+  RS+ V IPPG+ +G  ++
Sbjct:   180 QEVKTLFGRMVRSQVCSTCRGEGKIPKTPCRECGGSGLVRKTRSITVKIPPGIDHGHRLR 239

Query:   282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             I G G   R     GDL+V + +   +   R+ ++L  +  + + +A LG  +E+
Sbjct:   240 IAGGGEAGRFGGPPGDLYVYIKIKPHKLFKREDIHLKLEKEISFVQAALGAKVEI 294

GO:0006457 "protein folding" evidence=ISS

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|BA_4538 BA_4538 "chaperone protein dnaJ" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 103/292 (35%), Positives = 155/292 (53%)

Query:    45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
             DYY  L + + A+  EIK +YR+LA+KYHPD++K   A EKFKE+  AYEVLSDD+KR+ 
Sbjct:     5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQ 64

Query:   105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXXX 164
             YD+FG AG    + G          F                  +               
Sbjct:    65 YDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFFGGGGGRRRDPNAPRQGA------- 117

Query:   165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
              D++Y + L FEE+IFG +  +E+   + CD+C G+GAK     ++CK C G G V   Q
Sbjct:   118 -DLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQ 176

Query:   225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
              TPFG I     CS C G G++I + C  C G+G+V+ ++ + V IP G+ NG  +++ G
Sbjct:   177 NTPFGRIVNRQACSHCSGTGQMIKEKCTTCHGSGKVRKRKKINVKIPAGIDNGQQIRVSG 236

Query:   285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             +G        AGDL+V +HV   +   R+G ++  ++ + + +  LG  +EV
Sbjct:   237 KGEAGVNGGPAGDLYVVVHVRSHEFFEREGDHIICEMPLTFAQMALGAEVEV 288

GO:0009408 "response to heat" evidence=ISS

TIGR_CMR|DET_1398 DET_1398 "co-chaperone protein DnaJ" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 306 (112.8 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
 Identities = 56/171 (32%), Positives = 98/171 (57%)

Query:   166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
             D+ YD+ ++ EE+  G ++ I     E C  C GTGAK+   +  C  C G G V + Q+
Sbjct:   115 DMSYDIRITLEEAATGVEKEITTERLEYCSECSGTGAKAGTSLVKCTNCNGTGQVYQVQK 174

Query:   226 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 285
             + FG  + V+ C KC G+G II + C +C G G+   KR+++V IP GV++G  +++ G 
Sbjct:   175 SVFGRFTSVTPCPKCRGEGTIIGEPCAKCRGTGKEYVKRTVQVKIPAGVADGNQIRLNGY 234

Query:   286 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             G    + + AGD+++ + +       RDG ++  ++ +++ +A LGT + V
Sbjct:   235 GGVGDKGASAGDVYINVSIASHADFKRDGDDVIYELEINFAQAALGTEVNV 285

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|P95830 dnaJ "Chaperone protein DnaJ" [Streptococcus pneumoniae TIGR4 (taxid:170187)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 100/293 (34%), Positives = 154/293 (52%)

Query:    44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
             T++Y  L V +NA+  EIK +YRKL++KYHPDINK PGAE+K+KE+  AYE LSDD+KR+
Sbjct:     4 TEFYDRLGVSKNASADEIKKAYRKLSKKYHPDINKEPGAEDKYKEVQEAYETLSDDQKRA 63

Query:   104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAXXXXXXXXXXXXXEAXXXXXXXXXXXXX 163
              YD++G AG  G + G      G   F    A                            
Sbjct:    64 AYDQYGAAGANGGFGGAG----GFGGFN--GAGGFGGFEDIFSSFFGGGGSSRNPNAPRQ 117

Query:   164 XLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
               D++Y ++L+FEE+IFG ++ ++      C +C G+GAK      +C  C G G +   
Sbjct:   118 GDDLQYRVNLTFEEAIFGTEKEVKYHREAGCRTCNGSGAKPGTSPVTCGRCHGAGVINVD 177

Query:   224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
              +TP G++ +  TC  C G GK I   C  C G G  +   S+ V IP GV  G  +++ 
Sbjct:   178 TQTPLGMMRRQVTCDVCHGRGKEIKYPCTTCHGTGHEKQAHSVHVKIPAGVETGQQIRLA 237

Query:   284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             G+G         GDL+V + V+      R+G  +F  +++++ +A LG ++++
Sbjct:   238 GQGEAGFNGGPYGDLYVVVSVEASDKFEREGTTIFYNLNLNFVQAALGDTVDI 290

GO:0005515 "protein binding" evidence=IPI

TIGR_CMR|GSU_0034 GSU_0034 "chaperone protein dnaJ" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 287 (106.1 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
 Identities = 58/171 (33%), Positives = 95/171 (55%)

Query:   166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
             D++Y++ LSFEE+ FG ++ I+V   + C  CGG+GAK     + C  C G G V   Q 
Sbjct:   121 DLQYNMELSFEEAAFGAEKEIQVPYGKRCGDCGGSGAKPGTEPKVCPTCRGAGQVRFQQ- 179

Query:   226 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 285
                G  S   TC+ C G+G+++ + C  C G+G ++  +++ V +P GV  G  +++ GE
Sbjct:   180 ---GFFSVSKTCNHCNGEGRVVENPCTSCRGSGMIRDTKTLSVKVPAGVETGTRLKLSGE 236

Query:   286 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             G    +    GDL+VA+ V E     R+  ++  +I V + +A LG  +EV
Sbjct:   237 GGQGIKGGGNGDLYVAIAVREHPIFTREDNDVLCEIPVSFVQAALGCEIEV 287

GO:0009408 "response to heat" evidence=ISS

UNIPROTKB|Q47XI7 dnaJ "Chaperone protein DnaJ" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 299 (110.3 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
 Identities = 59/171 (34%), Positives = 94/171 (54%)

Query:   166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
             D+RY++ LS E+++ G    I+V  + +C+ C G+GAK     ++C  C G G V   Q 
Sbjct:   119 DLRYNVDLSLEDAVKGKSLEIKVPTYVSCEPCDGSGAKKGTSAKTCSTCHGHGQVQMRQ- 177

Query:   226 TPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGE 285
                GL +   TC  C G GK+I D C  C G G V+  +++ V IP GV  G  +++ GE
Sbjct:   178 ---GLFAVQQTCPTCSGKGKVIADKCTSCRGQGRVEKTKTLSVKIPAGVDTGDRIRLSGE 234

Query:   286 GNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             G      + AGDL+V ++V + +   RD  +L+ ++ + +  A LG  +EV
Sbjct:   235 GEAGEHGAPAGDLYVQVNVRDHEIFVRDENHLYCEVPISFVTAALGGDIEV 285

GO:0006457 "protein folding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00017877001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (386 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00033682001	SubName- Full=Chromosome chr8 scaffold_68, whole genome shotgun sequence;; Essential component [...] (313 aa)	•		•				•		0.685
	GSVIVG00015306001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence;; Essential component [...] (298 aa)	•		•				•		0.675
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)	•		•				•		0.534
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)	•		•						0.533
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)	•		•						0.523
	GSVIVG00037232001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (658 aa)	•		•						0.492
	GSVIVG00006687001	SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (667 aa)	•		•						0.491
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.490
	GSVIVG00022731001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (655 aa)	•		•						0.488
	GSVIVG00027261001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (298 aa)	•		•				•		0.486

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	339
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-109
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-100
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	5e-89
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	3e-81
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-80
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-78
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	2e-77
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	1e-75
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	7e-75
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	2e-71
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	1e-70
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	4e-67
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	5e-67
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-66
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-66
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	7e-65
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	2e-63
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	2e-63
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	1e-61
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	4e-59
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	2e-57
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	1e-55
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	3e-55
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	7e-53
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	3e-51
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	2e-50
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	6e-50
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	5e-48
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	7e-48
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-37
pfam00226	63	pfam00226, DnaJ, DnaJ domain	6e-31
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	2e-26
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	2e-25
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	3e-24
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	1e-21
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	2e-20
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-20
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	4e-18
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	4e-17
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	7e-11
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	4e-09
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	6e-07
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	7e-06
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	7e-05
PRK01356	166	PRK01356, hscB, co-chaperone HscB; Provisional	2e-04
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	3e-04
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	3e-04
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	4e-04
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	0.001
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	0.001
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	0.001
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	0.004

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  322 bits (828), Expect = e-109
 Identities = 129/293 (44%), Positives = 177/293 (60%), Gaps = 6/293 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A+ +EIK +YRKLA+KYHPD NK   AEEKFKEI+ AYEVLSD EKR+ 
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQ 60

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGV-GEAGGINFNFGNKGNF 163
           YD+FG AG  G   G      G + F+    FFG    +FG   G  GG      +    
Sbjct: 61  YDQFGHAGFNG---GGGGGGGGFNGFD--IGFFGDFGDIFGDFFGGGGGSGRRRRSGPRR 115

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G D+RYDL L+FEE++FG ++ IE+   E+C++C GTGAK     ++C  C G G V + 
Sbjct: 116 GEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQ 175

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
           Q TPFG   Q  TC  CGG+GKII + C  C G G V+ ++++ V IP GV  G  +++ 
Sbjct: 176 QGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS 235

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           G+GN        GDL+V + V   +   RDG +L+ ++ + +T+AILG  +EV
Sbjct: 236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEV 288

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  299 bits (767), Expect = e-100
 Identities = 134/294 (45%), Positives = 179/294 (60%), Gaps = 11/294 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A   E+K +YR+LARKYHPD+NK PGAE++FKEI+ AYEVLSD E R+ 
Sbjct: 4   DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRAR 63

Query: 105 YDRFGEAGITGE--YDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           YD+FGEAG++G   +  + +     D FE    FF G    FGG G  GG     G +  
Sbjct: 64  YDQFGEAGVSGAAGFPDMGDMGGFADIFE---TFFSG----FGGAGGQGGRRRRRGPQR- 115

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+RYDL L F E+IFGG++ I +   ETC++C G+GAK      +C  C G G V +
Sbjct: 116 -GDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRR 174

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RTPFG  +QVS C  C G G++I D C  CGG G  Q  + +K+ IP GV  G  +++
Sbjct: 175 ATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            GEG+   R    GDL+V L V       RDG+N+ S+I + Y +AILG ++EV
Sbjct: 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEV 288

Length = 374

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  271 bits (694), Expect = 5e-89
 Identities = 127/297 (42%), Positives = 171/297 (57%), Gaps = 15/297 (5%)

Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDE 100
           A  DYY  L V ++A+ +EIK +YRKLA+KYHPD N     AEEKFKEI+ AYEVLSD E
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE 61

Query: 101 KRSVYDRFGEAGI-TGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGN 159
           KR+ YD+FG AG   G + G      G D  +++  FFGG  G  G             N
Sbjct: 62  KRAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGG--GGGGRRR---------PN 110

Query: 160 KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGG 219
           +   G D+RY+L ++ EE++FG ++ I V+   TC +C G+GAK     ++C  C G G 
Sbjct: 111 RPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQ 170

Query: 220 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 279
           V   QRT F   S   TC  C G GKII D C +C G G V+ K+S+ V IP GV +G  
Sbjct: 171 VRTVQRTGF--FSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDR 228

Query: 280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +++ GEG        AGDL+V +HV       RDG +L+ ++ + +TEA LG  +EV
Sbjct: 229 IRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEV 285

Length = 371

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  251 bits (643), Expect = 3e-81
 Identities = 133/312 (42%), Positives = 179/312 (57%), Gaps = 29/312 (9%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLS 97
           AA  DYY  L V +NAT +EIK +YR+LA+KYHPD+N  PG   AE+KFKEI+ AYE+LS
Sbjct: 2   AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN--PGDKEAEQKFKEINEAYEILS 59

Query: 98  DDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGG-SDGLFGGVGEAGGINFN 156
           D +KR+ YD+FG A       G     QG         F GG  D  FGG G+     F 
Sbjct: 60  DPQKRAQYDQFGHAAFDPGGFGQGGFGQG--------GFGGGGFDFDFGGFGDIFEDIFG 111

Query: 157 --FGN----------KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKS 204
             FG           KG    DIRYDL L+FEE+ FG ++ IEV  FE CD C G+GAK 
Sbjct: 112 DFFGTGRRRAETGPQKGA---DIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKP 168

Query: 205 SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKR 264
            +   +C  C G G V   Q TPFG I  + TC +C G+GKII D C +CGG G ++ +R
Sbjct: 169 GSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRR 228

Query: 265 SMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD 324
            +KV IP G+ +G  + +RGEG    +    GDL++ + V       R+G N++ ++ + 
Sbjct: 229 KIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPIT 288

Query: 325 YTEAILGTSMEV 336
           +T+A LG  +E+
Sbjct: 289 FTDAALGGEIEI 300

Length = 386

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  249 bits (639), Expect = 1e-80
 Identities = 119/296 (40%), Positives = 162/296 (54%), Gaps = 21/296 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V +NA+  EIK +YRKLA KYHPD N     AEEKFKEI  AYEVLSD +KR+
Sbjct: 5   DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRA 64

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
            YD++G A    E  G      G   F +++   FG    +FGG    G        +  
Sbjct: 65  AYDQYGHAAF--EQGGGGGGFGGGGGFGDIFGDIFG---DIFGGGRGGG------RQRAR 113

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
            G D+RY++ ++ EE++ G  + I +    TCD+C G+GAK     ++C  C G G V  
Sbjct: 114 RGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRM 173

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
            Q    G  +   TC  C G GKII D C++C G G V+ ++++ V IP GV  G   +I
Sbjct: 174 QQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTG--DRI 227

Query: 283 R--GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           R  GEG    R   AGDL+V +HV E     RDG +L+ ++ + +T A LG  +EV
Sbjct: 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEV 283

Length = 371

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  244 bits (624), Expect = 2e-78
 Identities = 121/297 (40%), Positives = 168/297 (56%), Gaps = 21/297 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L + ++A++++IK +YRKLA KYHPD NK P AEEKFKEIS AY VLSD EKR+ 
Sbjct: 6   DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQ 65

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG--- 161
           YDRFG AGI  +Y                   F G+D  FGG G+   + F  G +    
Sbjct: 66  YDRFGHAGIDNQYSA--------------EDIFRGAD--FGGFGDIFEMFFGGGGRRGRM 109

Query: 162 --NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGG 219
               G D+RYDL+++ EE+ FG ++ I+V   E C +C GTGAK     + C  C G G 
Sbjct: 110 GPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQ 169

Query: 220 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 279
           V  T+ TP G     +TCS C G G++I   C  C G G+V+  R + V +P G  +G  
Sbjct: 170 VTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLR 229

Query: 280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +++ GEG      + +GDL++ LHV E     R G ++ S+I + +T+A LG  + V
Sbjct: 230 LKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMV 286

Length = 377

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  241 bits (617), Expect = 2e-77
 Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 5/296 (1%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
              T+YY  L V ++A+  EIK +YRKL++KYHPDINK PGAEEK+KE+  AYE LSD +
Sbjct: 1   MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQ 60

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           KR+ YD++G AG  G + G +    G D        FGG + +F      GG   N  N 
Sbjct: 61  KRAAYDQYGAAGANGGFGGGAGGFGGFDGS----GGFGGFEDIFSSFFGGGGARRN-PNA 115

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
              G D++Y ++L FEE+IFG ++ +  +   TC +C G+GAK      +C  C G G +
Sbjct: 116 PRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVI 175

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
               +TP G++ +  TC  C G GK I + C+ C G G  +   ++ V IP GV  G  +
Sbjct: 176 TVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQI 235

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +++G+G         GDL+V   V+  +   RDG  ++  + + + +A LG ++EV
Sbjct: 236 RLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEV 291

Length = 380

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  237 bits (606), Expect = 1e-75
 Identities = 123/296 (41%), Positives = 174/296 (58%), Gaps = 16/296 (5%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V ++A+  EIK +YRKL++KYHPDINK  GA+EKFKEIS AYEVLSDD+KR+ 
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQ 64

Query: 105 YDRFGEAGITGEYDGLSNTSQ---GVDPFE-LYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           YD+FG AG    + G         G   FE ++S+FFGG     GG       + N   +
Sbjct: 65  YDQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGG-----GGRRR----DPNAPRQ 115

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
           G    D++Y + L+FEE++FG ++ IE+   ETCD+C G+GAK     ++C  C G G V
Sbjct: 116 GA---DLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQV 172

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
              Q TPFG +    TC  C G G+ I + C  C G G+V+ ++ + V IP GV NG  +
Sbjct: 173 SVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQI 232

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           ++ GEG        AGDL+V   V   +   RDG +++ ++ + + +A LG  +EV
Sbjct: 233 RVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEV 288

Length = 376

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  235 bits (600), Expect = 7e-75
 Identities = 120/305 (39%), Positives = 167/305 (54%), Gaps = 25/305 (8%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V +NAT +EIK +YR+LARKYHPD NK+P AEEKFKEI+ AY+VLSD EKR +
Sbjct: 4   DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKL 63

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGS--------DGLFGGVGEAGGINFN 156
           YD+FG A  +G         Q     E +S F GG+          +FG     G     
Sbjct: 64  YDQFGHAAFSGSG-------QQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRAT 116

Query: 157 FGNKGNF-----GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSC 211
              +  +     G DI   + +S EE+  G    +EV  +  C++CGGTG    +  + C
Sbjct: 117 RERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVC 176

Query: 212 KACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIP 271
             C G G +   QR  F  ISQ  TC  CGG+G ++ + C +C G G V  K ++KV IP
Sbjct: 177 PTCGGSGEI--YQRGGFFRISQ--TCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIP 231

Query: 272 PGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILG 331
           PGV NG+ +++ G+G+  R     GDL++ + V       R G NL+  +++   EA+LG
Sbjct: 232 PGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLG 291

Query: 332 TSMEV 336
           T +EV
Sbjct: 292 TELEV 296

Length = 382

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  226 bits (577), Expect = 2e-71
 Identities = 116/297 (39%), Positives = 170/297 (57%), Gaps = 21/297 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLSDDEK 101
           DYY  L V ++A+ +EIK SYRKLA KYHPD  ++PG   AEE FKE + AYEVLSD +K
Sbjct: 5   DYYEILGVTRDASEEEIKKSYRKLAMKYHPD--RNPGDKEAEELFKEAAEAYEVLSDPKK 62

Query: 102 RSVYDRFGEAGITGEYDGLSNTS-QGVDPFE-LYSAFFGGSDGLFGGVGEAGGINFNFGN 159
           R +YD++G       ++GLS T   G   F+ ++S+F    +  FG  G   G +     
Sbjct: 63  RGIYDQYG-------HEGLSGTGFSGFSGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVR 115

Query: 160 KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGG 219
            G    D+RYDL L F E+ FG ++ I +   ETC+ C G+G +      +C  C G G 
Sbjct: 116 AGA---DLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQ 172

Query: 220 VLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT 279
           V ++Q    G  S  +TC +C G GK+I+  C+ C G G V+  ++++V IP GV  G+ 
Sbjct: 173 VTQSQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSR 228

Query: 280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +++RGEG    R    GDL+V L V+  +   RDG ++  K+ + + +A LG  +EV
Sbjct: 229 LRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEV 285

Length = 366

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  224 bits (572), Expect = 1e-70
 Identities = 112/298 (37%), Positives = 167/298 (56%), Gaps = 10/298 (3%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
           A   DYY  L V +NA  +EIK +YRKLARKYHPD+++  GAEEKFKEIS AY VLSDDE
Sbjct: 2   AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDE 61

Query: 101 KRSVYDRFGEAGITGEYDGLSNTS--QGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG 158
           KR  YD+FG AG+    DG S       ++  +++  F  G   +F   G  GG      
Sbjct: 62  KRQRYDQFGHAGM----DGFSQEDIFNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQ 117

Query: 159 NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRG 218
                G DI  ++ ++ EE+  G ++ I+V   + C  C G+ A+  + +++C  C G G
Sbjct: 118 R----GADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTG 173

Query: 219 GVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            V + + T  G +  V+TC  C G+GKI+   C  C G G V+  +++ V IP GV  G+
Sbjct: 174 QVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGS 233

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            +++ GEG    R    GDL+V + V   +   R+G NL+ +  + + +A LG +++V
Sbjct: 234 RLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDV 291

Length = 378

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  215 bits (548), Expect = 4e-67
 Identities = 108/304 (35%), Positives = 162/304 (53%), Gaps = 23/304 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEKR 102
           DYY  L V +NAT +EIK +Y++L +++HPD +      AE+KFKEI  AYEVLSD +KR
Sbjct: 5   DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 103 SVYDRFGEAGITGEYDGLSNTSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
           ++YDRFG  G    Y    +      D F+ +   F     +F         +  FG + 
Sbjct: 65  AMYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFN--RDIF---------DIFFGERR 113

Query: 162 N---------FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCK 212
                      G DIRY++ ++  + I G +  +E   +ETC  CGGTG +  +   +C 
Sbjct: 114 TQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCP 173

Query: 213 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPP 272
            C G G + + +R+ FG+     TC +CGG GKI  ++C  CGG+G ++ +    V IP 
Sbjct: 174 KCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233

Query: 273 GVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGT 332
           GV +G  ++I G GN        GDL+V + V       R G +L   +++DY +AILGT
Sbjct: 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGT 293

Query: 333 SMEV 336
           ++EV
Sbjct: 294 TVEV 297

Length = 369

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  215 bits (548), Expect = 5e-67
 Identities = 113/296 (38%), Positives = 166/296 (56%), Gaps = 5/296 (1%)

Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDE 100
           A  DYY  L + + A+  EIK ++RKLA KYHPD NK +  AEEKFKEI+ AY+VLSD +
Sbjct: 2   ASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQ 61

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNK 160
           K++ YD+FG A   G     S    G D  ++   F    D  FGG   +     N   +
Sbjct: 62  KKAQYDQFGTADFNGAGGFGSGGFGGFDFSDM-GGFGDIFDSFFGGGFGSSSRRRNGPQR 120

Query: 161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGV 220
           G    DI Y ++L+FEE++FG ++ I V+  E C++C GTGAK     ++C  C G G +
Sbjct: 121 GA---DIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQI 177

Query: 221 LKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATM 280
              + TP G     +TC KCGG GK+I D C +C G G+V+  R +KV +P GV  G  +
Sbjct: 178 RVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVI 237

Query: 281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            +RG+G   +     GDL++ + V   +   R G +++    + + +A LGT ++V
Sbjct: 238 PLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKV 293

Length = 380

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  214 bits (546), Expect = 1e-66
 Identities = 121/307 (39%), Positives = 179/307 (58%), Gaps = 22/307 (7%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLSDDE 100
            DYY+ L V + A+ +EIK +YRKLA KYHPD  K+PG   AE++FKE+S AYEVLSD +
Sbjct: 1   MDYYTILGVSKTASPEEIKKAYRKLAVKYHPD--KNPGDAEAEKRFKEVSEAYEVLSDAQ 58

Query: 101 KRSVYDRFGE------AGITGEYDGLSNTSQGVDPFE-LYSAFFGGS----DGLFGGVGE 149
           KR  YDR+G+      AG  G   G+ N    +  F   +   FGG     +GLFGG+GE
Sbjct: 59  KRESYDRYGKDGPFAGAGGFGG-AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGE 117

Query: 150 AGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQ 209
           A G+          G   +  + LSFEE+  G ++ + VS +++CD+C G+GA SS  I+
Sbjct: 118 AFGMRGGPAGARQ-GASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIK 176

Query: 210 SCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV 269
            C  C G G V++++    G  S  STC +CGG+G++I D C  C G G ++ KRS+ V 
Sbjct: 177 VCDRCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVH 232

Query: 270 IPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAI 329
           IP GV +G  +++ G G+  +  + AGDL+V + V+      R G +L  ++ + + +A 
Sbjct: 233 IPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAA 292

Query: 330 LGTSMEV 336
           LG   E+
Sbjct: 293 LGMKKEI 299

Length = 391

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  212 bits (543), Expect = 3e-66
 Identities = 113/302 (37%), Positives = 149/302 (49%), Gaps = 29/302 (9%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
            DYY  L V +NA+  EIK +YRKLAR+ HPD+N    A+EKFKEIS AYEVLSD EKR 
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRR 62

Query: 104 VYDRFGE---------AGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGIN 154
           + D  G+          G  G + GL       D FE   AFFGG     G  G      
Sbjct: 63  IVDLGGDPLESAGGGGGGFGGGFGGLG------DVFE---AFFGGGAASRGPRGRV---- 109

Query: 155 FNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKAC 214
                 G+  L +R  L L  EE   G  + + V     CD C G G    +   +C  C
Sbjct: 110 ----RPGSDSL-LRMRLDL--EECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTC 162

Query: 215 WGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV 274
            GRG V   QR+  G +     C  C G G++I D C  C G+G V+++R + V IP GV
Sbjct: 163 GGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGV 222

Query: 275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSM 334
            +G  +++  +G        AGDL+V +H        RDG +L   +SV   +A LGT++
Sbjct: 223 GDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTV 282

Query: 335 EV 336
            V
Sbjct: 283 TV 284

Length = 378

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  209 bits (533), Expect = 7e-65
 Identities = 114/293 (38%), Positives = 160/293 (54%), Gaps = 13/293 (4%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V ++A+  EIK +YRKLA +YHPD N  +P AE+KFKE + AYEVL D EKR+
Sbjct: 5   DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRA 64

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
            YDRFG AG+ G   G    S   D F  +S  FG   G F G G   G       +   
Sbjct: 65  RYDRFGHAGVNG-NGGFGGFSSAEDIFSHFSDIFGDLFG-FSGGGSRRG------PRPQA 116

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G D+RY+L +SF ++  G +  + +    TCD CGG+GA      ++C+ C G G V ++
Sbjct: 117 GSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQS 176

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
           Q    G       C  C G+G++I   C +C G+G VQ  R +KV IP GV  G+ +++R
Sbjct: 177 Q----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLR 232

Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           GEG         GDL+V + V++ +   R G +L     + + +A LG  +EV
Sbjct: 233 GEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEV 285

Length = 373

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  205 bits (524), Expect = 2e-63
 Identities = 117/302 (38%), Positives = 166/302 (54%), Gaps = 10/302 (3%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLS 97
           A   DYY  L V + AT+ EIK +YRK A +YHPD  K+PG   AEEKFKE + AY+VLS
Sbjct: 2   AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPD--KNPGDKEAEEKFKEAAEAYDVLS 59

Query: 98  DDEKRSVYDRFGEAGITGEYDGLSNTSQGV---DPFELYSAFFGGSDGLFGGVGEAGGIN 154
           D +KRS YD+FG AG+ G   G   + +G+   D F ++   FGG  G FGG G  GG  
Sbjct: 60  DPDKRSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGG-- 117

Query: 155 FNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKAC 214
                +   G D+R  + L+ +E   G ++  +V  +  C  C GTGA+ +N  ++C  C
Sbjct: 118 GGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTC 177

Query: 215 WGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV 274
            G G V + Q T  G +   STC  C G+GKII   C++CGG G V  +  + V IP GV
Sbjct: 178 KGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGV 237

Query: 275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSM 334
           + G  + + G+GN  +   + GDL V +  +    + RD  +L   + +    A LG ++
Sbjct: 238 AEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAV 297

Query: 335 EV 336
           EV
Sbjct: 298 EV 299

Length = 386

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  205 bits (522), Expect = 2e-63
 Identities = 109/298 (36%), Positives = 164/298 (55%), Gaps = 25/298 (8%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V +NA++ E+K +YRKLARKYHPD+NK+P AE+KFKE+  AY+ LSD +K++ 
Sbjct: 5   DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAH 64

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG------ 158
           YD+FG                  DP +    F GG  G FGG  +   + F  G      
Sbjct: 65  YDQFGHT----------------DPNQ---GFGGGGAGDFGGFSDIFDMFFGGGGGRRNP 105

Query: 159 NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRG 218
           N    G D++Y + L F+E++FG +  IE+   ETC +C G+GAK     ++C  C G G
Sbjct: 106 NAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSG 165

Query: 219 GVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            +   Q TPFG +     C  C G GKII   C  CGG G+V+ ++ + V +P G+ +G 
Sbjct: 166 QLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQ 225

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            +++ G+G         GDL+V  +V   +   RDG +++ ++ + + +  LG  +EV
Sbjct: 226 QLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEV 283

Length = 371

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  201 bits (513), Expect = 1e-61
 Identities = 113/315 (35%), Positives = 167/315 (53%), Gaps = 34/315 (10%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG---AEEKFKEISSAYEVLSDDEK 101
           DYY  L V ++A   EIK +YRKLA KYHPD  K+P    AEE FKE++ AYEVLS+D+K
Sbjct: 4   DYYEVLGVSRSADKDEIKKAYRKLALKYHPD--KNPDNKEAEEHFKEVNEAYEVLSNDDK 61

Query: 102 RSVYDRFGEAGITGEYDGLSNTSQGVDPF--------ELYSAFFGGSDGLFGGVGEAGGI 153
           R  YD+FG AG+     G S  S G   +        +++SAF   +D   GG    GG 
Sbjct: 62  RRRYDQFGHAGV-----GSSAASGGGPGYGGGGGDFNDIFSAF---NDMFGGGARRGGGS 113

Query: 154 NFNFGN------------KGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG 201
            F F +             G  G D++  L L+ EE   G ++ +++     C  C GTG
Sbjct: 114 PFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTG 173

Query: 202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ 261
           +K+    ++C  C G G V +  +T FG    ++ C  CGG+G+++ D C  C G G  Q
Sbjct: 174 SKTGA-TETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQ 232

Query: 262 SKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI 321
            + ++KV +P GV +G  + +RG+GN   R    GDL V +     +   R+G ++   +
Sbjct: 233 GEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNL 292

Query: 322 SVDYTEAILGTSMEV 336
           +V Y + +LGT +EV
Sbjct: 293 AVSYPDLVLGTKVEV 307

Length = 397

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  194 bits (495), Expect = 4e-59
 Identities = 124/306 (40%), Positives = 161/306 (52%), Gaps = 22/306 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V ++AT  EIK +YRKLAR+YHPD NK    AEE+FKEIS AY+VLSD++KR 
Sbjct: 10  DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69

Query: 104 VYDR----FGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFG- 158
            YD     FG  G      G      G   F+L   F GG+ G  GG G  GG+   FG 
Sbjct: 70  EYDEARSLFGNGGFR---PGPGGGGGGGFNFDLGDLFGGGAQG-GGGAGGGGGLGDVFGG 125

Query: 159 --NKGNF------GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQS 210
             N+G        G D+  ++ LSF E+I G    + ++    C +C GTGAK+    + 
Sbjct: 126 LFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRV 185

Query: 211 CKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVI 270
           C  C G G V +      G  S    C  C G G I  D C  C G+G  +S R+M+V I
Sbjct: 186 CPTCSGTGQVSRNS----GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRI 241

Query: 271 PPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAIL 330
           P GVS+G  +++RG+G    R   AGDL+V +HVD      R G NL   + V + EA L
Sbjct: 242 PAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAAL 301

Query: 331 GTSMEV 336
           G  + V
Sbjct: 302 GAEVRV 307

Length = 389

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  189 bits (482), Expect = 2e-57
 Identities = 109/295 (36%), Positives = 160/295 (54%), Gaps = 13/295 (4%)

Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSV 104
           YY  L V ++A  +EIK++YRKLA KYHPD NK +  +EEKFKE + AYE+L D +KR  
Sbjct: 6   YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQA 65

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFG---GVGEAGGINFNFGNKG 161
           YD+FG+AG+     G      G   +  +S  FG    +FG   G G  GG      +  
Sbjct: 66  YDQFGKAGVNAGAGGF-----GQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGP 120

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D+RY+L +S E++  G +  IE+   E+C  C G+GA   +   +C  C G G + 
Sbjct: 121 QRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIR 180

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           +TQ    G  S  +TC  C G G +I + C+ CGG G  + +R++ + IPPGV  G+ ++
Sbjct: 181 RTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLK 236

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           + GEG         GDL+V  H+ + +   R G +L     +   +AILG  +EV
Sbjct: 237 VSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEV 291

Length = 372

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  185 bits (470), Expect = 1e-55
 Identities = 103/294 (35%), Positives = 150/294 (51%), Gaps = 15/294 (5%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+  EIK++YRKLA KYHPD NK  GA EKF +I+ AY VLSD EKR+ 
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG-NF 163
           YDRFG A   G   G      G DP +++         LFGG G  GG     G +G   
Sbjct: 63  YDRFGTAPGAGMPGGDPFGGMGFDPMDIFEQ-------LFGGAGFGGG----RGRRGPAR 111

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAK-SSNCIQSCKACWGRGGVLK 222
           G D+  +  ++ E++  G +  +EV     C+ C G+  +      ++C  C G G V  
Sbjct: 112 GDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRA 171

Query: 223 TQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI 282
             RT FG++     C  C G+G+II D C  C G G      ++KV +P G+  G  +++
Sbjct: 172 QARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV 231

Query: 283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            G GN        GDL+V + ++    + R+  +L  +  + + +A LG  + V
Sbjct: 232 AGMGN--EGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITV 283

Length = 371

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  183 bits (467), Expect = 3e-55
 Identities = 102/300 (34%), Positives = 159/300 (53%), Gaps = 27/300 (9%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+ QEI+ +YRKLA++YHPD+NKSP A +K  EI+ A +VL D +KR  
Sbjct: 5   DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQ 64

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFN------FG 158
           YD+FG A     +DG S  S            FG  + LF  +G +G  +F       FG
Sbjct: 65  YDQFGHAA----FDGSSGFSSN----------FGDFEDLFSNMGSSGFSSFTNIFSDFFG 110

Query: 159 -NKGNF-----GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCK 212
            NK ++     G  +  D++L+F+E +FG  + IE+     C  C G+GA+S++ I  C 
Sbjct: 111 SNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICN 170

Query: 213 ACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPP 272
            C G G VL  +   F    Q + C+ C G GKII + C+ C G G+   ++ ++V IP 
Sbjct: 171 NCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPK 230

Query: 273 GVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLN-LFSKISVDYTEAILG 331
           G+     +++  +G+      + GDL + +++ E +       N +    ++ Y +AILG
Sbjct: 231 GIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILG 290

Length = 372

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  177 bits (451), Expect = 7e-53
 Identities = 107/303 (35%), Positives = 163/303 (53%), Gaps = 26/303 (8%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDE 100
           DYY  L V +NA+ ++IK ++R+LA+K+HPD++  PG    AEEKFKEIS AYEVLSD +
Sbjct: 4   DYYKILGVDRNASQEDIKKAFRELAKKWHPDLH--PGNKAEAEEKFKEISEAYEVLSDPQ 61

Query: 101 KRSVYDR-----FGEAGITGEYDGLSNTSQGVDPFELYSAFFGGS--DGLFGGVGEAGGI 153
           KR  YD+     FG  G    +D  ++ S   D  ++++  FGG+     F G G     
Sbjct: 62  KRRQYDQTGTVDFGAGGSNFNWDNFTHFS---DINDIFNQIFGGNFGSDFFSGFG----- 113

Query: 154 NFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKA 213
             N  +  N  LDI  +L +S E++ +G ++ I+      C  C GTGAK+   I +C  
Sbjct: 114 --NQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLI-TCPT 170

Query: 214 CWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
           C G G     +   F  +  V+TC  CGG G+I  + C RC G G V     + V IP G
Sbjct: 171 CHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKG 230

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTS 333
            ++   ++++G+G     R+  GDL+V L V+    I R   +L+    +++ +A LG  
Sbjct: 231 ATDNLRLRVKGKGQSYGGRT--GDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGE 288

Query: 334 MEV 336
           +E+
Sbjct: 289 IEI 291

Length = 365

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  174 bits (443), Expect = 3e-51
 Identities = 104/310 (33%), Positives = 151/310 (48%), Gaps = 23/310 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           D+Y  L V  +A+ +EIK +YRKLAR+ HPD N   P AEE+FK +S A++VLSD  KR 
Sbjct: 10  DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69

Query: 104 VYDRF-----------GEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGG 152
            YD                   G + G      G + F L   F     G  GG+G+  G
Sbjct: 70  EYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAE-FNLNDLFDAAGRGGGGGIGDLFG 128

Query: 153 INFNFG------NKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSN 206
             FN G      ++   G D+  +  L F E+  G    + ++    C +C G+GA+   
Sbjct: 129 GLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGT 188

Query: 207 CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSM 266
             + C  C G  GV+   +  FG       C+ C G G II D C  C G G     R++
Sbjct: 189 SPKVCPTCNG-SGVISRNQGAFGF---SEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTI 244

Query: 267 KVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYT 326
            V IPPGV +G  +++ G+G    R + +GDL+V +HV   +   RDG +L   + V +T
Sbjct: 245 NVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFT 304

Query: 327 EAILGTSMEV 336
           E  LG+++ V
Sbjct: 305 ELALGSTLSV 314

Length = 392

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  171 bits (435), Expect = 2e-50
 Identities = 98/295 (33%), Positives = 153/295 (51%), Gaps = 15/295 (5%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+  ++K +Y KLA++YHPD   +  AE+KFKEI++AY+VL D++KR+ 
Sbjct: 4   DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAA 63

Query: 105 YDRFGEAGITGEYD---GLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKG 161
           YDRFG      +     G ++     D  +++  FF    G        G       +  
Sbjct: 64  YDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMG--------GSRRSRPTSSK 115

Query: 162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVL 221
             G D++Y+L ++ EE+  G ++ I  S    CD+C G+G++    + +C AC G G   
Sbjct: 116 VRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVG--- 172

Query: 222 KTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
              R   G  +    C KC G+G+II + C++C G G    +R++ V IP GV NG  ++
Sbjct: 173 -ATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIR 231

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             GEG    R   +GDL+V + +        DG NL  K+ + +  A LG  +EV
Sbjct: 232 HTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEV 286

Length = 372

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  170 bits (431), Expect = 6e-50
 Identities = 97/300 (32%), Positives = 158/300 (52%), Gaps = 24/300 (8%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L + + A+  EIK +YRK+A KYHPD NK +  AE  FKE + AYEVL DD KR+
Sbjct: 4   DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRA 63

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN- 162
            YDRFG               +G   FE +S  F G   +F   G+    +F  GN+G  
Sbjct: 64  QYDRFGHTAF-----------EGGGGFEGFSGGFSGFSDIFEDFGDIFD-SFFTGNRGQD 111

Query: 163 ------FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWG 216
                  G D+ Y + +S E++  G +  I ++    C+SC G  ++       C  C G
Sbjct: 112 KNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNG 171

Query: 217 RGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSN 276
            G V++      G     +TC KC G+GKII + C+ C G G ++ K ++++ IP G+ +
Sbjct: 172 SGRVMQGG----GFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDD 227

Query: 277 GATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
              +++RG+G+ +      GDL++ + +   +   R+G +L++ + + +T+A LG  +++
Sbjct: 228 NQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKI 287

Length = 365

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  166 bits (422), Expect = 5e-48
 Identities = 97/295 (32%), Positives = 141/295 (47%), Gaps = 33/295 (11%)

Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVY 105
            Y  LN+ ++ T  EIK +YRKLA K+HPD     G  EKFKEIS AYEVLSD EKR +Y
Sbjct: 30  LYEVLNLSKDCTTSEIKKAYRKLAIKHHPD---KGGDPEKFKEISRAYEVLSDPEKRKIY 86

Query: 106 DRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGL 165
           D +GE       +GL    Q  D  +L+   FGG         + GG           G 
Sbjct: 87  DEYGE-------EGLEGGEQPADASDLFDLIFGGGR-------KPGG--------KKRGE 124

Query: 166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
           DI   L ++ E+   G  R + ++    C +C G G    +    CK C G+G  ++ Q 
Sbjct: 125 DIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQG--IRVQI 181

Query: 226 TPFG-LISQV-STCSKCGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
              G +I Q  STC+ C G GKII     C+ C G G  ++++ ++V I  GV N   + 
Sbjct: 182 RQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKIT 241

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
             GE + ++   + G++   L+        R+G +LF    +   EA+ G    +
Sbjct: 242 FHGEAD-EKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYI 295

Length = 421

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  164 bits (417), Expect = 7e-48
 Identities = 107/292 (36%), Positives = 157/292 (53%), Gaps = 18/292 (6%)

Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDEKRSV 104
           YY  L V +++  + IK SYRKLA KYHPD N     AEEKFK I+ AY VLSD++KR++
Sbjct: 5   YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YDR+G+ G+       S+ S   D FE   +FF  + G FG  G           K +  
Sbjct: 65  YDRYGKKGLNQAGASQSDFS---DFFEDLGSFFEDAFG-FGARGSK-------RQKSSIA 113

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D    + LSF+E++FG ++ I+V     C+SC GTGAK    +++CK C G+G V   Q
Sbjct: 114 PDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAK-DKALETCKQCNGQGQVFMRQ 172

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
               G +S   TC  C G GKII   C+ C G   +     +  +IP G+ +   M ++ 
Sbjct: 173 ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKN 228

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +GN +  +   GDL++   V E +   R+G +LF +  V +T   LG +++V
Sbjct: 229 KGN-EYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKV 279

Length = 369

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  135 bits (340), Expect = 2e-37
 Identities = 71/156 (45%), Positives = 92/156 (58%), Gaps = 11/156 (7%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
            A  DYY+ L V +NA+  EIK +++KLARKYHPD+NKSPGAEEKFKEI+ AY VLSD E
Sbjct: 1   MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPE 60

Query: 101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPF-----ELYSAFFGGSDGLFGGVGEAGGINF 155
           KR +YD +G    +  + G      G   F       +S FF     LFGG G  GG   
Sbjct: 61  KRRIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFF---QQLFGGRGGFGGFGD 117

Query: 156 NFGNKG---NFGLDIRYDLHLSFEESIFGGQRGIEV 188
            FG+ G     G D+  +L L+ EE+  GG++ +EV
Sbjct: 118 LFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV 153

Length = 291

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  111 bits (279), Expect = 6e-31
 Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 1/63 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA-EEKFKEISSAYEVLSDDEKRS 103
           DYY  L V ++A+ +EIK +YRKLA KYHPD N    A EEKFKEI+ AYEVLSD EKR+
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 104 VYD 106
           +YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 99.2 bits (248), Expect = 2e-26
 Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 2/60 (3%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEK 101
           TDYY  L V ++A+L EIK +YRKLA KYHPD N      AEEKFKEI+ AYEVLSD EK
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  103 bits (258), Expect = 2e-25
 Identities = 42/103 (40%), Positives = 65/103 (63%), Gaps = 13/103 (12%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ + V+    L+ IKT+YR+LARKYHPD++K P AE +FKE++ A+EVLSD+++R+ 
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 64

Query: 105 YD---------RFGEAGITGEYDGLSNTSQGVDPFELYSAFFG 138
           YD         +F         DG S  ++  D  +++S+ FG
Sbjct: 65  YDQLWQHRNDPQFNRQ--FQHGDGQSFNAEDFD--DIFSSIFG 103

Length = 306

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 93.0 bits (232), Expect = 3e-24
 Identities = 36/55 (65%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSD 98
          DYY  L V  +A+ +EIK +YRKLA KYHPD N   P AEEKFKEI+ AYEVLSD
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 95.7 bits (237), Expect = 1e-21
 Identities = 37/74 (50%), Positives = 52/74 (70%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L + ++A  QEIK ++RKLA+KYHPD NK+P A   F EI+ A +VLS+ +KR+ 
Sbjct: 3   DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRAN 62

Query: 105 YDRFGEAGITGEYD 118
           YD++G  G+  E D
Sbjct: 63  YDKYGHDGVDREDD 76

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 83.1 bits (206), Expect = 2e-20
 Identities = 29/65 (44%), Positives = 36/65 (55%)

Query: 194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 253
           C +C G+GAK     ++C  C G G V + Q T FG     +TC  CGG GKII D C +
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTGFGFFQTQTTCPTCGGTGKIIKDPCPK 60

Query: 254 CGGNG 258
           C G G
Sbjct: 61  CKGKG 65

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 88.0 bits (217), Expect = 2e-20
 Identities = 58/279 (20%), Positives = 89/279 (31%), Gaps = 64/279 (22%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKR 102
           DYY  L V  NA+L+EIK +YRKLA KYHPD N      AEEKFKEI+ AYE+LSD E+R
Sbjct: 7   DYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERR 66

Query: 103 SVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGN 162
           + YD+ G                                       +      ++     
Sbjct: 67  AEYDKIG--------------------------------------ADNYFPGKSYRESAA 88

Query: 163 FGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLK 222
           F ++    L   +EE      +    +      S G +G           A         
Sbjct: 89  FPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGL--------AAALSLFADEAA 140

Query: 223 TQRTPFGLI----SQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA 278
            +           +      +     K  +               +++K  I  G   G 
Sbjct: 141 LRSGSLRRRDLAANLADNFEEALAGVKKAV----------ARLLGKALKSTIKAGALEGK 190

Query: 279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL 317
            ++++G       R   G   +            +G + 
Sbjct: 191 ALRLKGLL--KSARGALGKARLKELSKRHPPFALEGDDK 227

Length = 237

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 79.8 bits (198), Expect = 4e-18
 Identities = 28/77 (36%), Positives = 46/77 (59%)

Query: 260 VQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFS 319
           V+ K+++ V IP GV +G  +++RGEG+        GDL+V + V       RDG +L+ 
Sbjct: 31  VREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYC 90

Query: 320 KISVDYTEAILGTSMEV 336
           ++ +  TEA+LG  +EV
Sbjct: 91  EVPISLTEALLGGEIEV 107

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 74.3 bits (183), Expect = 4e-17
 Identities = 33/65 (50%), Positives = 38/65 (58%)

Query: 194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRR 253
           C  C GTGAK     ++C  C G G V+K QRTP G+     TC KCGG GKII D C+ 
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQVVKRQRTPGGVFQMQQTCPKCGGTGKIIKDPCKV 60

Query: 254 CGGNG 258
           C G G
Sbjct: 61  CKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 63.3 bits (153), Expect = 7e-11
 Identities = 29/72 (40%), Positives = 42/72 (58%)

Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           T +Y  L V  NA ++EI   Y KLA  Y+P          KFK+I+ AY++L D +K+ 
Sbjct: 573 TLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKK 632

Query: 104 VYDRFGEAGITG 115
           +Y++FG  GI G
Sbjct: 633 MYNKFGYDGIKG 644

Length = 1136

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 57.3 bits (138), Expect = 4e-09
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 16/93 (17%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA--------EEKFKEISSAYE 94
           G D Y  L + Q+ + ++IK  YR L+ K+HPD  K+P          EEK+K I+ AY 
Sbjct: 97  GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPD--KAPPMVNELRSEYEEKYKTITKAYG 154

Query: 95  VLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGV 127
           +L+D ++R  Y  +G        D   +TS+G+
Sbjct: 155 LLTDKKRRENYLNYGTP------DSPQHTSEGI 181

Length = 610

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 49.8 bits (120), Expect = 6e-07
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG------- 81
                +++        D Y  L V ++   QEIK +YRKL  ++HPD   + G       
Sbjct: 185 QGGGGYQQAQRGPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMME 244

Query: 82  -AEEKFKEISSAYEVL 96
            A+EK +EI +AYE++
Sbjct: 245 MAKEKAQEIQAAYELI 260

Length = 267

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 45  DYYSTLNV---RQNATLQEIKTSYRKLARKYHPDINKSPGA---EEKFKEISSAYEVLSD 98
           D Y+ L +   R  A   +I  +++K   KYHPD   + G    +E FK I  A EVL D
Sbjct: 44  DLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGD 103

Query: 99  DEKRSVYD 106
            + R  YD
Sbjct: 104 RKLRLQYD 111

Length = 379

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 44.3 bits (105), Expect = 7e-05
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 15/81 (18%)

Query: 192 ETCDSCGGTGAKSSNCI--QSCKACWGRG--------GVLKTQRTPF-GLISQVSTCSKC 240
           + C  CGG G      +  + C  C G G        GV    R       S    C KC
Sbjct: 3   KKCPECGGKGKI---VVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKC 59

Query: 241 GGDGKI-IIDHCRRCGGNGEV 260
            G G + + D C  CGG G+V
Sbjct: 60  RGKGTVTVYDTCPECGGTGKV 80

Length = 715

>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)

Query: 45  DYYSTLNVRQ--NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISS----AYEVLSD 98
           +Y+  L + Q  N  L+ ++  Y  +  KYHPD  K+   +E+   I+S    AY  L D
Sbjct: 3   NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKD 62

Query: 99  DEKRSVY 105
             KR+ Y
Sbjct: 63  ALKRAEY 69

Length = 166

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 8/69 (11%)

Query: 45  DYYSTLNVRQNAT--LQEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           D +    + +     L  +K  YR+L R YHPD        E+        E++ AY+ L
Sbjct: 2   DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTL 61

Query: 97  SDDEKRSVY 105
            D   R+ Y
Sbjct: 62  KDPLLRAEY 70

Length = 174

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 264 RSMKVVIPPGVSNGATMQIRGEGNFDRRRSLA-GDLFVALHVD 305
           R +K+ IP G   G  ++I+G+G    +     GDL V L+V 
Sbjct: 27  RKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRGDLIVTLNVK 69

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 4/51 (7%)

Query: 59  QEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVY 105
             ++  YR+L  +YHPD +        A ++   ++ AY  L D  +R+ Y
Sbjct: 6   SRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 38.9 bits (92), Expect = 0.001
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 254 CGGNGEVQS-KRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVD 305
            GG  EV +    +K+ IPPG   G  ++++G+G    R    GDL+V + V+
Sbjct: 101 LGGEIEVPTLGGKVKLKIPPGTQPGTVLRLKGKGMPRLRGGGRGDLYVEVKVE 153

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 8/59 (13%)

Query: 233 QVSTCSKCGGDGKIIIDH--CRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFD 289
            +  C +CGG GKI++    C  C G G            P GV+N +   +    +F+
Sbjct: 1   MIKKCPECGGKGKIVVGEEECPVCHGTGFSDD------FDPKGVANLSRETVDLFASFE 53

Length = 715

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 38.5 bits (90), Expect = 0.001
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 14/61 (22%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPD-----------INKSPGAEEKFKEISSAY 93
           D    L V   A    IK +YRKL  + HPD           I K    +EK +EI  AY
Sbjct: 114 DALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEK---LKEKLQEIQEAY 170

Query: 94  E 94
           E
Sbjct: 171 E 171

Length = 174

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 21/78 (26%), Positives = 38/78 (48%)

Query: 259 EVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLF 318
           E +  +++ V IP GV NG  ++++G+G         GDL++ +H+         G +L 
Sbjct: 153 EQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLE 212

Query: 319 SKISVDYTEAILGTSMEV 336
             + +   EA LG  + V
Sbjct: 213 IVVPLAPWEAALGAKVTV 230

Length = 306

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.96
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.84
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.79
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.79
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.77
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.77
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.77
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.73
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.72
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.7
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.68
PHA03102	153	Small T antigen; Reviewed	99.67
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.64
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.62
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.61
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.61
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.59
PRK14282	369	chaperone protein DnaJ; Provisional	99.56
PRK14290	365	chaperone protein DnaJ; Provisional	99.54
PRK14298	377	chaperone protein DnaJ; Provisional	99.53
PRK14294	366	chaperone protein DnaJ; Provisional	99.52
PRK10767	371	chaperone protein DnaJ; Provisional	99.51
PRK14285	365	chaperone protein DnaJ; Provisional	99.5
PRK14300	372	chaperone protein DnaJ; Provisional	99.5
PRK14301	373	chaperone protein DnaJ; Provisional	99.5
PRK14278	378	chaperone protein DnaJ; Provisional	99.49
PRK14284	391	chaperone protein DnaJ; Provisional	99.48
PRK14286	372	chaperone protein DnaJ; Provisional	99.48
PRK14281	397	chaperone protein DnaJ; Provisional	99.47
PRK14279	392	chaperone protein DnaJ; Provisional	99.47
PRK14288	369	chaperone protein DnaJ; Provisional	99.47
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.46
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.46
PRK14287	371	chaperone protein DnaJ; Provisional	99.46
PRK14296	372	chaperone protein DnaJ; Provisional	99.45
PRK14280	376	chaperone protein DnaJ; Provisional	99.45
PRK14276	380	chaperone protein DnaJ; Provisional	99.45
PRK05014	171	hscB co-chaperone HscB; Provisional	99.44
PRK14293	374	chaperone protein DnaJ; Provisional	99.43
PRK14297	380	chaperone protein DnaJ; Provisional	99.43
PRK14277	386	chaperone protein DnaJ; Provisional	99.43
PRK01356	166	hscB co-chaperone HscB; Provisional	99.43
PRK14295	389	chaperone protein DnaJ; Provisional	99.43
PRK14289	386	chaperone protein DnaJ; Provisional	99.42
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.42
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.41
PRK00294	173	hscB co-chaperone HscB; Provisional	99.41
PRK14283	378	chaperone protein DnaJ; Provisional	99.39
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.38
PRK14291	382	chaperone protein DnaJ; Provisional	99.38
PRK03578	176	hscB co-chaperone HscB; Provisional	99.37
PRK14292	371	chaperone protein DnaJ; Provisional	99.36
PTZ00100	116	DnaJ chaperone protein; Provisional	99.34
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.23
PHA02624	647	large T antigen; Provisional	99.19
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.16
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.12
PRK01773	173	hscB co-chaperone HscB; Provisional	99.01
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.95
PRK14299	291	chaperone protein DnaJ; Provisional	98.92
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.82
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.73
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.68
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.66
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.63
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.47
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	98.25
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.23
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.06
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.97
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	97.83
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.76
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.26
PLN03165	111	chaperone protein dnaJ-related; Provisional	96.92
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	96.82
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	96.59
KOG2813	406	consensus Predicted molecular chaperone, contains	96.38
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.87
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.37
KOG2813	406	consensus Predicted molecular chaperone, contains	94.82
KOG0431	453	consensus Auxilin-like protein and related protein	93.58
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	93.57
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	86.5
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	86.5
TIGR00310	192	ZPR1_znf ZPR1 zinc finger domain.	83.39
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	82.94
PRK14714	1337	DNA polymerase II large subunit; Provisional	82.66
smart00709	160	Zpr1 Duplicated domain in the epidermal growth fac	82.12
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	81.78
COG5552	88	Uncharacterized conserved protein [Function unknow	80.41

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.5e-76  Score=555.11  Aligned_cols=283  Identities=45%  Similarity=0.777  Sum_probs=255.2

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC
Q 019562           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~  119 (339)
                      ++.+|||+||||+++||++|||||||+||++||||+|+ +++|+++|++|+|||||||||+||++||+||.++++.+..+
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g   80 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG   80 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence            35789999999999999999999999999999999999 88999999999999999999999999999999988632222


Q ss_pred             CCCCCCCC--ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCC
Q 019562          120 LSNTSQGV--DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (339)
Q Consensus       120 ~~~~~~~~--~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C  197 (339)
                      +. ++.++  +..|||++|||+..+  +   .      ...+...++.|+++.|.|||+||++|+++++.+++.+.|+.|
T Consensus        81 g~-g~~~fgg~~~DIF~~~FgGg~~--~---~------~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C  148 (371)
T COG0484          81 GF-GFGGFGGDFGDIFEDFFGGGGG--G---R------RRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTC  148 (371)
T ss_pred             CC-CcCCCCCCHHHHHHHhhcCCCc--c---c------CCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcC
Confidence            11 22222  578999999963211  0   0      011235689999999999999999999999999999999999


Q ss_pred             CCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCC
Q 019562          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (339)
Q Consensus       198 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G  277 (339)
                      +|+|.+......+|++|+|+|.+...+++  |++++.++|+.|+|+|+++.++|..|+|.+++...++|+|+||+|+.+|
T Consensus       149 ~GsGak~gt~~~tC~tC~G~G~v~~~~~~--g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g  226 (371)
T COG0484         149 HGSGAKPGTDPKTCPTCNGSGQVRTVQRT--GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDG  226 (371)
T ss_pred             CCCCCCCCCCCCcCCCCCCcCeEEEEEee--eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccC
Confidence            99999999999999999999999888877  7888889999999999999999999999999999999999999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ++|++.|+|++..+++++|||||+|.|++|+.|.|+|+|||++++|++.+|+||++|+||
T Consensus       227 ~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vp  286 (371)
T COG0484         227 DRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVP  286 (371)
T ss_pred             CEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEE
Confidence            999999999999888889999999999999999999999999999999999999999997

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.8e-67  Score=504.59  Aligned_cols=281  Identities=33%  Similarity=0.648  Sum_probs=242.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCc--ccCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE--YDGL  120 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~--~~~~  120 (339)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||+|||||+||+.||+||+++++..  +.++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~   82 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcC
Confidence            57999999999999999999999999999999999888899999999999999999999999999999876531  1100


Q ss_pred             CCCCC---------CCC-hhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEee
Q 019562          121 SNTSQ---------GVD-PFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSC  190 (339)
Q Consensus       121 ~~~~~---------~~~-~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~  190 (339)
                      .+++.         +++ ..++|++|||+.       + ..      ..+..++.|+.++|.|||+|+|+|+++++.+.+
T Consensus        83 ~~~~~~~~~~~~~~g~~~f~d~f~~~fggg-------~-~~------~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~  148 (372)
T PRK14296         83 FGDFEDLFSNMGSSGFSSFTNIFSDFFGSN-------K-SD------YQRSTKGQSVSLDIYLTFKELLFGVDKIIELDL  148 (372)
T ss_pred             CCccccccccccccccccchhhhhhhcCCC-------c-cC------CCCcCCCCCeEEEeeccHHHhhCCeeEEEEEee
Confidence            00000         111 124555555421       0 00      112346899999999999999999999999999


Q ss_pred             eeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEe
Q 019562          191 FETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVI  270 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~I  270 (339)
                      .+.|+.|+|+|........+|+.|+|+|.++..++.++.++++..+|+.|.|+|+++.+.|+.|.|.+++.+.++++|.|
T Consensus       149 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~I  228 (372)
T PRK14296        149 LTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNI  228 (372)
T ss_pred             eeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEE
Confidence            99999999999998888899999999999988887766555666899999999999999999999999999999999999


Q ss_pred             CCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCcccc-ccceeEecccChhhhhcCCeEEee
Q 019562          271 PPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD-GLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       271 p~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~-g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+++|++|+|+|+|++..+++.+|||+|+|++++|+.|+|+ |+||+++++|+|+|||||+++.|+
T Consensus       229 p~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~  296 (372)
T PRK14296        229 PKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIK  296 (372)
T ss_pred             CCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEee
Confidence            9999999999999999987666789999999999999999995 899999999999999999999987

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.9e-66  Score=499.60  Aligned_cols=283  Identities=41%  Similarity=0.767  Sum_probs=249.2

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..+|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||++|+.||+||+++++.++++..
T Consensus         3 ~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (377)
T PRK14298          3 TTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAED   82 (377)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCccc
Confidence            35799999999999999999999999999999999988889999999999999999999999999999988764321100


Q ss_pred             C-CCCCC-ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCC
Q 019562          122 N-TSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (339)
Q Consensus       122 ~-~~~~~-~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G  199 (339)
                      . ...++ +..++|++|||+..       ...      .....++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+|
T Consensus        83 ~~~~~~~~~~~d~f~~~Fgg~~-------~~~------~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G  149 (377)
T PRK14298         83 IFRGADFGGFGDIFEMFFGGGG-------RRG------RMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSG  149 (377)
T ss_pred             ccccCCcCcchhhhHhhhcCCC-------ccC------CCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCC
Confidence            0 00111 22377888886410       000      012346899999999999999999999999999999999999


Q ss_pred             CCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCE
Q 019562          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (339)
Q Consensus       200 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~  279 (339)
                      +|........+|+.|+|+|.++..++.++|++++..+|+.|.|+|+++.+.|+.|.|.+++.+.++++|.||||+++|++
T Consensus       150 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~  229 (377)
T PRK14298        150 TGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLR  229 (377)
T ss_pred             CcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCE
Confidence            99998888899999999999998888888888878999999999999999999999999999999999999999999999


Q ss_pred             EEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       280 i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+|+|++...++.+|||||+|.+++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       230 i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  287 (377)
T PRK14298        230 LKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVP  287 (377)
T ss_pred             EEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEe
Confidence            9999999987667789999999999999999999999999999999999999999986

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.6e-66  Score=496.97  Aligned_cols=281  Identities=37%  Similarity=0.769  Sum_probs=249.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~  122 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||++|++||+||++++..+++++  
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~--   80 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGG--   80 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCC--
Confidence            479999999999999999999999999999999998788999999999999999999999999999998775432111  


Q ss_pred             CCCCC-ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCC
Q 019562          123 TSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (339)
Q Consensus       123 ~~~~~-~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G  201 (339)
                      +..++ +..|+|++|||+..   +   . ..     .....++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+|+|
T Consensus        81 ~~~~f~~~~d~f~~~fgg~~---~---~-~~-----~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G  148 (371)
T PRK14287         81 GAGDFGGFSDIFDMFFGGGG---G---R-RN-----PNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSG  148 (371)
T ss_pred             CCccccchHHHHHhhhcccc---C---C-CC-----CCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcc
Confidence            11112 23478888887410   0   0 00     01234689999999999999999999999999999999999999


Q ss_pred             ccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEE
Q 019562          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~  281 (339)
                      ........+|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.+.|..|.|.+++.+.++++|.||||+++|++|+
T Consensus       149 ~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~  228 (371)
T PRK14287        149 AKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLR  228 (371)
T ss_pred             cCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEE
Confidence            99888889999999999999999999999988899999999999999999999999999989999999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       229 ~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  284 (371)
T PRK14287        229 VSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVP  284 (371)
T ss_pred             EccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEE
Confidence            99999987666688999999999999999999999999999999999999999986

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-65  Score=497.59  Aligned_cols=284  Identities=38%  Similarity=0.758  Sum_probs=250.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC--
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL--  120 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~--  120 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||++|++||+||+++++.++.+.  
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG   82 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence            479999999999999999999999999999999998888999999999999999999999999999998876432110  


Q ss_pred             C-CCC---CC-CChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCC
Q 019562          121 S-NTS---QG-VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (339)
Q Consensus       121 ~-~~~---~~-~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~  195 (339)
                      + .++   .+ .+..++|++|||+.    ++   ...     .....++.|+.++|.|||+|+|+|+++++.+.+.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~----~~---~~~-----~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~  150 (380)
T PRK14276         83 GFGGFDGSGGFGGFEDIFSSFFGGG----GA---RRN-----PNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCH  150 (380)
T ss_pred             CCCCccccccccchhhHHHHHhCcc----cc---ccC-----cCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCC
Confidence            0 111   11 13347888888641    00   000     11234689999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCC
Q 019562          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (339)
Q Consensus       196 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~  275 (339)
                      .|+|+|........+|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.+.|..|.|.+++.+.++++|.||+|++
T Consensus       151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (380)
T PRK14276        151 TCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVE  230 (380)
T ss_pred             CCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence            99999999888889999999999999988999999998899999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEeec
Q 019562          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       276 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      +|++|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||++++.|+|.|||+|++++|+.
T Consensus       231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~t  293 (380)
T PRK14276        231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPT  293 (380)
T ss_pred             CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEc
Confidence            999999999999876666789999999999999999999999999999999999999999863

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-65  Score=496.49  Aligned_cols=283  Identities=42%  Similarity=0.801  Sum_probs=250.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC-
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS-  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~-  121 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||++++..++.+++ 
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~   82 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF   82 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence            4799999999999999999999999999999999988889999999999999999999999999999988764321111 


Q ss_pred             --CCCC-CCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCC
Q 019562          122 --NTSQ-GVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (339)
Q Consensus       122 --~~~~-~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~  198 (339)
                        .++. +++..|+|++|||+.    +.  . ..     .....++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+
T Consensus        83 ~~~~~~~~~~~~d~f~~~fgg~----~~--~-~~-----~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~  150 (376)
T PRK14280         83 GGGDFGGGFGFEDIFSSFFGGG----GR--R-RD-----PNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCH  150 (376)
T ss_pred             CCCCccccccchhhHHHHhCCc----cc--c-Cc-----ccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCC
Confidence              0111 223457888888641    00  0 00     11234689999999999999999999999999999999999


Q ss_pred             CCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCC
Q 019562          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (339)
Q Consensus       199 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~  278 (339)
                      |+|.........|+.|+|+|.++..+++++|++++..+|+.|.|+|+++...|+.|.|.+++.+.+.++|.||+|+++|+
T Consensus       151 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~  230 (376)
T PRK14280        151 GSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQ  230 (376)
T ss_pred             CcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCc
Confidence            99999888889999999999999888899999988889999999999999999999999999999999999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|+|+|+|++...++.+|||||+|+|++|+.|+|+|+||++++.|+|+|||+|+++.|+
T Consensus       231 ~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  289 (376)
T PRK14280        231 QIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVP  289 (376)
T ss_pred             EEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEe
Confidence            99999999987666788999999999999999999999999999999999999999986

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=2.4e-65  Score=498.08  Aligned_cols=290  Identities=32%  Similarity=0.565  Sum_probs=244.8

Q ss_pred             cccccccCCCccccccccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCch
Q 019562           21 SFKWNYCSGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE  100 (339)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~  100 (339)
                      .+.|+.-.+-...|+...-.+...|||++|||+++||.+|||+|||+||++||||+|++   .++|++|++||+||+||+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~   81 (421)
T PTZ00037          5 GFPFDGMPGGGFDGGRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPE   81 (421)
T ss_pred             cCCcccccCCCCCCCcccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHH
Confidence            34676444444333222223336899999999999999999999999999999999853   589999999999999999


Q ss_pred             hhhhhhcccccCcCCcccCCCCCCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeec
Q 019562          101 KRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIF  180 (339)
Q Consensus       101 ~r~~yd~~G~~g~~~~~~~~~~~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~  180 (339)
                      +|++||+||++++.++.       ++.++.++|+.|||+.    +   .        .....++.|+.+.|.|||+|+|+
T Consensus        82 kR~~YD~~G~~~~~~~~-------~~~d~~d~f~~~Fggg----~---~--------~~~~~rg~di~~~l~vtLee~~~  139 (421)
T PTZ00037         82 KRKIYDEYGEEGLEGGE-------QPADASDLFDLIFGGG----R---K--------PGGKKRGEDIVSHLKVTLEQIYN  139 (421)
T ss_pred             HHHHHhhhcchhcccCC-------CCcchhhhHHHhhccc----c---c--------cccccCCCCEEEEeeeeHHHHhC
Confidence            99999999998765321       1235568888888641    0   0        01234689999999999999999


Q ss_pred             ccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe--ecccccCCce
Q 019562          181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGNG  258 (339)
Q Consensus       181 G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~--~~C~~C~g~g  258 (339)
                      |+++++.+.+.+.|+.|+|+|.... ...+|+.|+|+|.++...+.++.++++..+|+.|.|+|+++.  +.|..|.|.+
T Consensus       140 G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g  218 (421)
T PTZ00037        140 GAMRKLAINKDVICANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKG  218 (421)
T ss_pred             CCceEEEeeccccccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcc
Confidence            9999999999999999999998644 578999999999977776665533445579999999999975  8999999999


Q ss_pred             EEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          259 EVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       259 ~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ++.+.+.++|.||||+.+|++|+|+|+|++.. ++.+|||||+|.+++|+.|+|+|+||++++.|+|+|||||+++.|+
T Consensus       219 ~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~  296 (421)
T PTZ00037        219 VKKTRKILEVNIDKGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYIT  296 (421)
T ss_pred             eeeeeeEEEEeeCCCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEee
Confidence            99999999999999999999999999999864 5789999999999999999999999999999999999999999987

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-65  Score=492.18  Aligned_cols=283  Identities=37%  Similarity=0.636  Sum_probs=247.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~  122 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||++|++||+||++....+ ..+++
T Consensus         2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~-~~~~g   80 (378)
T PRK14278          2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG-GGGGG   80 (378)
T ss_pred             CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc-CCCCC
Confidence            37999999999999999999999999999999999887899999999999999999999999999998643211 00000


Q ss_pred             CCCCC-ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCC
Q 019562          123 TSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (339)
Q Consensus       123 ~~~~~-~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G  201 (339)
                      ...++ +..++|++|||+.    + .+.  .    ......++.|+.++|.|||+|+|+|+++++.+++.+.|+.|+|+|
T Consensus        81 ~~~~f~~~~d~f~~ffgg~----g-~~~--~----~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G  149 (378)
T PRK14278         81 FGGGFGGLGDVFEAFFGGG----A-ASR--G----PRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKG  149 (378)
T ss_pred             CCcCcCchhHHHHHHhCCC----C-CCC--C----CccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCcc
Confidence            00112 2347888888741    1 000  0    011234689999999999999999999999999999999999999


Q ss_pred             ccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEE
Q 019562          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~  281 (339)
                      ........+|+.|+|+|.++..+++.+|++++..+|+.|+|+|+++.+.|+.|.|.+++.+.++++|.||||+++|++|+
T Consensus       150 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~  229 (378)
T PRK14278        150 TAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIR  229 (378)
T ss_pred             CCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEE
Confidence            99888889999999999998888888999988899999999999999999999999999999999999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+|++...++.+|||+|+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       230 ~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  285 (378)
T PRK14278        230 LAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVE  285 (378)
T ss_pred             EccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEe
Confidence            99999987766778999999999999999999999999999999999999999987

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-65  Score=491.99  Aligned_cols=278  Identities=37%  Similarity=0.674  Sum_probs=235.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||++|++||+||++++.... ++.
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~-~~~   80 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG-ASQ   80 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC-CCc
Confidence            579999999999999999999999999999999997 567999999999999999999999999999998775321 100


Q ss_pred             CCCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCC
Q 019562          122 NTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (339)
Q Consensus       122 ~~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G  201 (339)
                      .++  .+.|+.|++||+..   ||+.+.. .    ...+..++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+|+|
T Consensus        81 ~~~--~~~f~~~~~~F~~~---fg~g~~~-~----~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G  150 (369)
T PRK14288         81 SDF--SDFFEDLGSFFEDA---FGFGARG-S----KRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTG  150 (369)
T ss_pred             ccc--ccchhhHHHHHHhh---cCCCCcc-c----CcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcc
Confidence            111  12233333344321   2110000 0    011234689999999999999999999999999999999999999


Q ss_pred             ccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEE
Q 019562          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~  281 (339)
                      .... ...+|+.|+|+|.++..+    |++++.++|+.|.|+|+++...|+.|.|.+++.+.++++|.||||+++|++|+
T Consensus       151 ~~~~-~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~  225 (369)
T PRK14288        151 AKDK-ALETCKQCNGQGQVFMRQ----GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMV  225 (369)
T ss_pred             cCCC-CCcCCCCCCCCcEEEEEe----ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEE
Confidence            9875 678999999999876543    66677789999999999999999999999999999999999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+|++.. ++.+|||+|+|.|++|+.|+|+|+||+++++|+|+|||||++++|+
T Consensus       226 l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~  280 (369)
T PRK14288        226 LKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVP  280 (369)
T ss_pred             EccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEee
Confidence            999999854 5789999999999999999999999999999999999999999987

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.1e-65  Score=490.93  Aligned_cols=286  Identities=37%  Similarity=0.701  Sum_probs=246.7

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~  119 (339)
                      ...|||++|||+++||.+|||+|||+||++||||+|+.  +.++++|++|++||+||+||++|++||+||++++...+.+
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~   81 (369)
T PRK14282          2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE   81 (369)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence            35799999999999999999999999999999999873  5688999999999999999999999999998876532111


Q ss_pred             --CCCCC-C----CC-Ch--hhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEe
Q 019562          120 --LSNTS-Q----GV-DP--FELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVS  189 (339)
Q Consensus       120 --~~~~~-~----~~-~~--~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~  189 (339)
                        +++++ .    .+ +.  .++|++|||+..      +.  ..   ......++.|+.+.|.|||+|+|+|+++++.++
T Consensus        82 ~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~------~~--~~---~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~  150 (369)
T PRK14282         82 TESGGGFFEDIFKDFENIFNRDIFDIFFGERR------TQ--EE---QREYARRGEDIRYEIEVTLSDLINGAEIPVEYD  150 (369)
T ss_pred             CCCCCcccccccccccccccchhhhHhhcccC------Cc--cc---ccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEee
Confidence              01110 0    01 11  155666665310      00  00   011235689999999999999999999999999


Q ss_pred             eeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEE
Q 019562          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV  269 (339)
Q Consensus       190 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~  269 (339)
                      +.+.|+.|+|+|........+|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.+.|..|.|.+++.+.++++|.
T Consensus       151 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~  230 (369)
T PRK14282        151 RYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVK  230 (369)
T ss_pred             ecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEE
Confidence            99999999999999888889999999999999999999999998899999999999999999999999999999999999


Q ss_pred             eCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEeec
Q 019562          270 IPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       270 Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      ||||+++|++|+|+|+|++...++.+|||+|+|.+++|+.|+|+|+||++++.|+|.|||+|+++.|+-
T Consensus       231 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~  299 (369)
T PRK14282        231 IPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPL  299 (369)
T ss_pred             eCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeC
Confidence            999999999999999999876677889999999999999999999999999999999999999999863

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1e-64  Score=489.34  Aligned_cols=283  Identities=39%  Similarity=0.758  Sum_probs=243.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||++|++||+||+++++.+..+.+
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence            479999999999999999999999999999999997 4678999999999999999999999999999988753211111


Q ss_pred             -CCCCC-----CChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCC
Q 019562          122 -NTSQG-----VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (339)
Q Consensus       122 -~~~~~-----~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~  195 (339)
                       +++.+     .+..|+|++|||+..+  +  +..++    ......++.|++++|.|||+|+|+|+++++.+++.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~--~--~~~~~----~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~  154 (372)
T PRK14286         83 QGAYTDFSDIFGDFGDIFGDFFGGGRG--G--GSGGG----RRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCV  154 (372)
T ss_pred             CCCcccccccccchhhHHHHhhCCCcc--C--CCccc----ccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCC
Confidence             11111     1334788888874211  0  00000    011235789999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCC
Q 019562          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (339)
Q Consensus       196 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~  275 (339)
                      .|+|+|........+|+.|+|+|.++..+    |++++..+|+.|.|+|+++.+.|..|.|.+++.+.+.++|.||||++
T Consensus       155 ~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (372)
T PRK14286        155 DCNGSGASKGSSPTTCPDCGGSGQIRRTQ----GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE  230 (372)
T ss_pred             CCcCCCcCCCCCCccCCCCcCeEEEEEEe----ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence            99999999888889999999999876653    66777789999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       276 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  292 (372)
T PRK14286        231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVP  292 (372)
T ss_pred             CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEe
Confidence            99999999999987766678999999999999999999999999999999999999999986

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-64  Score=491.07  Aligned_cols=288  Identities=42%  Similarity=0.785  Sum_probs=249.2

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCc-cc
Q 019562           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE-YD  118 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~-~~  118 (339)
                      ++..|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|+.||+||+++++.+ +.
T Consensus         2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~   81 (386)
T PRK14277          2 AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFG   81 (386)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccc
Confidence            34579999999999999999999999999999999997 46789999999999999999999999999999877532 11


Q ss_pred             CCC---CCC--CC-----CChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEE
Q 019562          119 GLS---NTS--QG-----VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEV  188 (339)
Q Consensus       119 ~~~---~~~--~~-----~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~  188 (339)
                      .++   +++  .+     .+..++|++||+++   ||+.+.   .   ......++.|+.++|.|||+|+|+|+++++.+
T Consensus        82 ~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~---fgg~~~---~---~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~  152 (386)
T PRK14277         82 QGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDF---FGTGRR---R---AETGPQKGADIRYDLELTFEEAAFGTEKEIEV  152 (386)
T ss_pred             cCCcCCCCccccCccccccchhHHHHHhhccc---ccCCCc---C---CCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEE
Confidence            100   110  00     12236788888642   321100   0   01123468999999999999999999999999


Q ss_pred             eeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEE
Q 019562          189 SCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKV  268 (339)
Q Consensus       189 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v  268 (339)
                      ++.+.|+.|+|+|........+|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.+.|..|.|.+++.+.+.++|
T Consensus       153 ~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V  232 (386)
T PRK14277        153 ERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKV  232 (386)
T ss_pred             EeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEE
Confidence            99999999999999988888999999999999999999999998889999999999999999999999999999999999


Q ss_pred             EeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          269 VIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       269 ~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      .||||+++|++|+|+|+|++...+..+|||+|+|+|++|+.|+|+|+||++++.|+|+|||+|+++.|+
T Consensus       233 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  301 (386)
T PRK14277        233 NIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIP  301 (386)
T ss_pred             ecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEE
Confidence            999999999999999999986656678999999999999999999999999999999999999999986

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-64  Score=487.44  Aligned_cols=285  Identities=39%  Similarity=0.762  Sum_probs=248.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|++||+||+++++.+...+.
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~   82 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS   82 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence            479999999999999999999999999999999997 4678999999999999999999999999999988753211000


Q ss_pred             CCCCC------CChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCC
Q 019562          122 NTSQG------VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (339)
Q Consensus       122 ~~~~~------~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~  195 (339)
                      +++++      .+..++|++|||+.   +++.+    ..   .....++.|++++|.|||+|+|+|+++++.+.+.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~---~g~~~----~~---~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  152 (380)
T PRK14297         83 GGFGGFDFSDMGGFGDIFDSFFGGG---FGSSS----RR---RNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCE  152 (380)
T ss_pred             CCCCCcCcccccchhHHHHHHhccC---ccccc----cc---cCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCC
Confidence            11111      12347889998741   11100    00   01234689999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCC
Q 019562          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (339)
Q Consensus       196 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~  275 (339)
                      .|+|+|........+|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.+.|..|.|.+++.+..+++|.||||++
T Consensus       153 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~  232 (380)
T PRK14297        153 TCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVD  232 (380)
T ss_pred             CcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCC
Confidence            99999999888889999999999999888899999888899999999999999999999999999999999999999999


Q ss_pred             CCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       276 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||++++.|+|+|||+|++++|+
T Consensus       233 ~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~  294 (380)
T PRK14297        233 TGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVP  294 (380)
T ss_pred             CCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEE
Confidence            99999999999987666678999999999999999999999999999999999999999986

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.4e-64  Score=482.18  Aligned_cols=280  Identities=34%  Similarity=0.692  Sum_probs=241.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCccc--C
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD--G  119 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~--~  119 (339)
                      .+|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|+.||+||+++++.+..  +
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~   81 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG   81 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence            479999999999999999999999999999999997 4678899999999999999999999999999987753211  1


Q ss_pred             CCCCCCC-----CChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeC
Q 019562          120 LSNTSQG-----VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETC  194 (339)
Q Consensus       120 ~~~~~~~-----~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C  194 (339)
                      ..+++.+     .+..++|++|||+..   +   ...      .....++.|+.++|.|||||+|+|+++++.+++.+.|
T Consensus        82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~---~---~~~------~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C  149 (365)
T PRK14285         82 FSGGFSGFSDIFEDFGDIFDSFFTGNR---G---QDK------NRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLC  149 (365)
T ss_pred             cCCCccccccccccHHHHHHHhhcCCc---C---CCC------CcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccC
Confidence            0011111     123367888886410   0   000      1123468999999999999999999999999999999


Q ss_pred             CCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCC
Q 019562          195 DSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGV  274 (339)
Q Consensus       195 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~  274 (339)
                      +.|+|+|.........|+.|+|+|.++.    .+|++++..+|+.|.|+|+++.+.|..|.|.+++.+.+.++|.||||+
T Consensus       150 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~----~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~  225 (365)
T PRK14285        150 ESCLGKKSEKGTSPSICNMCNGSGRVMQ----GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGI  225 (365)
T ss_pred             CCCCCcccCCCCCCccCCCccCceeEEe----cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCC
Confidence            9999999998888899999999998764    347777778999999999999999999999999999999999999999


Q ss_pred             CCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEeec
Q 019562          275 SNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       275 ~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      ++|++|+|+|+|++..+++.+|||||+|.+++|+.|+|+|+||++++.|+|.|||+|++++|+-
T Consensus       226 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~t  289 (365)
T PRK14285        226 DDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQT  289 (365)
T ss_pred             CCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEEC
Confidence            9999999999999877667789999999999999999999999999999999999999999873

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-63  Score=484.58  Aligned_cols=283  Identities=35%  Similarity=0.647  Sum_probs=235.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC--
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG--  119 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~--  119 (339)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+ ++.++++|++|++||+|||||+||++||+||+++...++.+  
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~~   87 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRR   87 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccccc
Confidence            479999999999999999999999999999999997 56789999999999999999999999999997533211110  


Q ss_pred             ---CC--CCC------CCCChhhhhcc-----------ccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceee
Q 019562          120 ---LS--NTS------QGVDPFELYSA-----------FFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEE  177 (339)
Q Consensus       120 ---~~--~~~------~~~~~~~~f~~-----------fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee  177 (339)
                         ++  +++      .+++..++|+.           +|++   +|++.+  ++.   ......++.|+.++|.|||+|
T Consensus        88 ~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~---~fg~~~--~~~---~~~~~~~g~di~~~l~ltLee  159 (392)
T PRK14279         88 FDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGG---LFNRGG--GSA---RPSRPRRGNDLETETTLDFVE  159 (392)
T ss_pred             ccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhh---hhcCCC--ccc---ccCCCCCCCCeEEEEEEEHHH
Confidence               00  010      01222223321           1111   111100  000   011234689999999999999


Q ss_pred             eecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCc
Q 019562          178 SIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGN  257 (339)
Q Consensus       178 ~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~  257 (339)
                      +|+|+++++.+.+.+.|+.|+|+|........+|+.|+|+|.++..+    +++++..+|+.|.|+|+++.+.|..|.|.
T Consensus       160 ~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~i~~~C~~C~G~  235 (392)
T PRK14279        160 AAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAFGFSEPCTDCRGTGSIIEDPCEECKGT  235 (392)
T ss_pred             HhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cceEEEEecCCCCceeEEeCCcCCCCCCC
Confidence            99999999999999999999999999888889999999999876653    55666789999999999999999999999


Q ss_pred             eEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          258 GEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       258 g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +++.+.+.++|.||||+++|++|+|+|+|++..++..+|||||+|.|++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       236 g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~  315 (392)
T PRK14279        236 GVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVP  315 (392)
T ss_pred             eEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEE
Confidence            99999999999999999999999999999987766778999999999999999999999999999999999999999986

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.8e-63  Score=483.81  Aligned_cols=282  Identities=39%  Similarity=0.706  Sum_probs=237.8

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC-CC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG-LS  121 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~-~~  121 (339)
                      .|||+||||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+|+++|++||+||++++..+... ++
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~   80 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG   80 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence            48999999999999999999999999999999997 46789999999999999999999999999999876422110 00


Q ss_pred             CCCCC-CCh---------------hhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEE
Q 019562          122 NTSQG-VDP---------------FELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRG  185 (339)
Q Consensus       122 ~~~~~-~~~---------------~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~  185 (339)
                      .++.+ .++               .++|++||++..+.|++     ..   ......++.|+.++|.|||||+|+|++++
T Consensus        81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~-----~~---~~~~~~~g~d~~~~l~vslee~~~G~~~~  152 (391)
T PRK14284         81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGM-----RG---GPAGARQGASKKVHITLSFEEAAKGVEKE  152 (391)
T ss_pred             CCcCcccchhhhccccccccccccccchhhhccCccccccc-----cc---cCCCcCCCCCeEEEEEEEHHHHhCCeeEE
Confidence            11111 011               24455555421101110     00   01123468899999999999999999999


Q ss_pred             EEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceE
Q 019562          186 IEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRS  265 (339)
Q Consensus       186 v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~  265 (339)
                      +.+.+.+.|+.|+|+|........+|+.|+|+|.++..+    |++++..+|+.|+|+|+++.+.|+.|.|.+++.+.++
T Consensus       153 i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~  228 (391)
T PRK14284        153 LLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRS  228 (391)
T ss_pred             EEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEE
Confidence            999999999999999999888889999999999877543    6677778999999999999999999999999999999


Q ss_pred             EEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          266 MKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       266 l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ++|.||||+++|++|+|+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       229 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~  300 (391)
T PRK14284        229 VHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIP  300 (391)
T ss_pred             EEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEe
Confidence            999999999999999999999998777889999999999999999999999999999999999999999986

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.5e-63  Score=476.35  Aligned_cols=282  Identities=39%  Similarity=0.720  Sum_probs=240.8

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~  120 (339)
                      ..+|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|++||+||+++++.+..++
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~   81 (366)
T PRK14294          2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG   81 (366)
T ss_pred             CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCC
Confidence            3579999999999999999999999999999999997 467899999999999999999999999999998875321110


Q ss_pred             CCCCC-CC-ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCC
Q 019562          121 SNTSQ-GV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (339)
Q Consensus       121 ~~~~~-~~-~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~  198 (339)
                      .+++. .+ +..|+|++|||.     ++.+.  +.   ......++.|+.++|.|||+|+|+|+++++.+.+.+.|+.|+
T Consensus        82 ~~~~~~~~~~~~d~f~~~fg~-----g~~~~--~~---~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~  151 (366)
T PRK14294         82 FSGFDDIFSSFGDIFEDFFGF-----GGGRR--GR---SRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECH  151 (366)
T ss_pred             cCccccchhhhhhhHHHhhcc-----CCCcC--Cc---ccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCC
Confidence            01111 01 123677777761     10000  00   001234689999999999999999999999999999999999


Q ss_pred             CCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCC
Q 019562          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (339)
Q Consensus       199 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~  278 (339)
                      |+|.........|+.|+|+|.++...    |++++..+|+.|.|+|+++.+.|+.|.|.+++.+.+.++|.||||+++|+
T Consensus       152 G~G~~~~~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  227 (366)
T PRK14294        152 GSGCEPGTSPTTCPQCGGSGQVTQSQ----GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGS  227 (366)
T ss_pred             CccccCCCCcccCCCcCCeEEEEEEe----eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCc
Confidence            99999888889999999999876532    66776789999999999999999999999999999999999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|+|+|+|++...++.+|||||+|.+++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       228 ~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  286 (366)
T PRK14294        228 RLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVP  286 (366)
T ss_pred             EEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEE
Confidence            99999999987667789999999999999999999999999999999999999999987

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-62  Score=477.27  Aligned_cols=284  Identities=41%  Similarity=0.688  Sum_probs=237.4

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhc----ccccCcCCc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDR----FGEAGITGE  116 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~----~G~~g~~~~  116 (339)
                      +..|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|++||+    ||++++..+
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            3579999999999999999999999999999999987 45789999999999999999999999999    998877532


Q ss_pred             ccCCCCCCCCCChhhhhccccCCC-------------CCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccE
Q 019562          117 YDGLSNTSQGVDPFELYSAFFGGS-------------DGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQ  183 (339)
Q Consensus       117 ~~~~~~~~~~~~~~~~f~~fFg~~-------------~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~  183 (339)
                      ..+++.+...+++.++|..++++.             .++|++ +   +    ......++.|+.++|.|||||+|+|++
T Consensus        87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~-~---~----~~~~~~~g~di~~~l~lsLee~~~G~~  158 (389)
T PRK14295         87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNR-G---G----RRTQPRRGADVESEVTLSFTEAIDGAT  158 (389)
T ss_pred             CCCCCCCCCCcccccccccccccccccccccchhhhhcccccC-C---C----CCCCCCCCCCEEEEEEEEHHHHhCCce
Confidence            110000000123333333221100             001111 0   0    011234689999999999999999999


Q ss_pred             EEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeec
Q 019562          184 RGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSK  263 (339)
Q Consensus       184 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~  263 (339)
                      ++|.+++.+.|+.|+|+|........+|+.|+|+|.++..+    |++++..+|+.|.|+|+++.+.|..|.|.+++.+.
T Consensus       159 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~  234 (389)
T PRK14295        159 VPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSS  234 (389)
T ss_pred             EEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceEEEEecCCCcceeEEeccCCCCCCCCceEeee
Confidence            99999999999999999999888889999999999887654    55666689999999999999999999999999999


Q ss_pred             eEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          264 RSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       264 ~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +.++|.||+|+++|++|+|+|+|++...+..+|||+|+|.|++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       235 ~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~  308 (389)
T PRK14295        235 RTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVP  308 (389)
T ss_pred             eEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEE
Confidence            99999999999999999999999987666778999999999999999999999999999999999999999986

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-62  Score=477.93  Aligned_cols=294  Identities=37%  Similarity=0.678  Sum_probs=245.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCccc-CC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD-GL  120 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~-~~  120 (339)
                      ..|||+||||+++|+.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||+||+++++.... ++
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~   81 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG   81 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence            479999999999999999999999999999999997 4578899999999999999999999999999987753211 11


Q ss_pred             CCCC--CCCChhhh---hccccCCCCCC-----CCCCCCCCCccccCC-CCCCCCcceEEEEeeceeeeecccEEEEEEe
Q 019562          121 SNTS--QGVDPFEL---YSAFFGGSDGL-----FGGVGEAGGINFNFG-NKGNFGLDIRYDLHLSFEESIFGGQRGIEVS  189 (339)
Q Consensus       121 ~~~~--~~~~~~~~---f~~fFg~~~~~-----fg~~g~~~~~~~~~~-~~~~~g~di~~~l~lslee~~~G~~~~v~~~  189 (339)
                      +.++  .+.+..++   |++|||+..++     ++..+..++...... ....++.|+.++|.|||||+|+|+++++.++
T Consensus        82 ~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~  161 (397)
T PRK14281         82 GPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIK  161 (397)
T ss_pred             CCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEE
Confidence            1111  11222333   45788752110     000000000000000 1124688999999999999999999999999


Q ss_pred             eeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEE
Q 019562          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVV  269 (339)
Q Consensus       190 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~  269 (339)
                      +.+.|+.|+|+|.... ...+|+.|+|+|.++..+++.+|++++..+|+.|.|+|+++.+.|+.|.|.+++...++++|.
T Consensus       162 r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~  240 (397)
T PRK14281        162 KQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVT  240 (397)
T ss_pred             eeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEe
Confidence            9999999999999876 578999999999999888899999888899999999999999999999999999999999999


Q ss_pred             eCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          270 IPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       270 Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ||||+++|++|+|+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       241 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  308 (397)
T PRK14281        241 VPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVP  308 (397)
T ss_pred             cCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEee
Confidence            99999999999999999987666789999999999999999999999999999999999999999987

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.4e-63  Score=476.95  Aligned_cols=278  Identities=39%  Similarity=0.745  Sum_probs=238.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||+||+||.+|+.||+||+++++++..  .
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~--~   80 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG--F   80 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCC--C
Confidence            579999999999999999999999999999999997 4668899999999999999999999999999988753211  0


Q ss_pred             CCCCC----CChh-hhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCC
Q 019562          122 NTSQG----VDPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDS  196 (339)
Q Consensus       122 ~~~~~----~~~~-~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~  196 (339)
                      +++.+    ++.| ++|++|||.     ++.+..      ...+..++.|+.++|.|||+|+|+|+++++.+.+.+.|+.
T Consensus        81 ~g~~~~~~~~~~f~d~f~~~fg~-----g~~~~~------~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~  149 (373)
T PRK14301         81 GGFSSAEDIFSHFSDIFGDLFGF-----SGGGSR------RGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDD  149 (373)
T ss_pred             CCcccccccccchHHHHHHHhhc-----cCcccc------cCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCC
Confidence            11111    1122 455555541     110000      0112357899999999999999999999999999999999


Q ss_pred             CCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCC
Q 019562          197 CGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSN  276 (339)
Q Consensus       197 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~  276 (339)
                      |+|+|........+|+.|+|+|.++..+    |++++..+|+.|.|+|+++...|+.|.|.+++.+.+.++|.||||+++
T Consensus       150 C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~  225 (373)
T PRK14301        150 CGGSGAAPGTSPETCRHCGGSGQVRQSQ----GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDT  225 (373)
T ss_pred             CCCcccCCCCCCcccCCccCeeEEEEEe----eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcC
Confidence            9999999888889999999999876543    667777899999999999999999999999999999999999999999


Q ss_pred             CCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          277 GATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       277 G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |++|+|+|+|++...++.+|||||+|.|++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       226 G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~  286 (373)
T PRK14301        226 GSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVP  286 (373)
T ss_pred             CCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEe
Confidence            9999999999987666778999999999999999999999999999999999999999986

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=1.5e-62  Score=472.71  Aligned_cols=283  Identities=45%  Similarity=0.817  Sum_probs=248.0

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCCCC
Q 019562           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS  124 (339)
Q Consensus        45 d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~~~  124 (339)
                      |||++|||+++|+.+|||+|||+||++||||+++++.++++|++|++||+||+|+.+|++||+||++++..+..+.++++
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~   80 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF   80 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence            79999999999999999999999999999999987789999999999999999999999999999987753211101111


Q ss_pred             C-----CC-ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCC
Q 019562          125 Q-----GV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (339)
Q Consensus       125 ~-----~~-~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~  198 (339)
                      .     ++ +..++|++|||+..   ++ +.  .    ......++.|+.++|.|||+|+|+|+++++.+++.+.|+.|+
T Consensus        81 ~~~~~~~~~~~~~~f~~~fg~~~---g~-~~--~----~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~  150 (354)
T TIGR02349        81 NGFDIGFFGDFGDIFGDFFGGGG---GS-GR--R----RRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCH  150 (354)
T ss_pred             CCccccCcCchhhhHHHHhccCc---cc-Cc--c----ccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCC
Confidence            1     11 23477888887421   10 00  0    011235689999999999999999999999999999999999


Q ss_pred             CCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCC
Q 019562          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (339)
Q Consensus       199 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~  278 (339)
                      |+|.........|+.|+|+|.++..+++++|++++..+|+.|.|+|+++...|+.|.|.+++.+.+.++|.||||+++|+
T Consensus       151 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  230 (354)
T TIGR02349       151 GTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQ  230 (354)
T ss_pred             CCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCC
Confidence            99999888889999999999999999999999998899999999999999999999999999999999999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|+|+|+|++...+..+|||||+|.+++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       231 ~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~  289 (354)
T TIGR02349       231 RLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVP  289 (354)
T ss_pred             EEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEe
Confidence            99999999986666778999999999999999999999999999999999999999885

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-62  Score=475.28  Aligned_cols=289  Identities=38%  Similarity=0.670  Sum_probs=242.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC--C
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG--L  120 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~--~  120 (339)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||++++......  +
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~   81 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG   81 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence            47999999999999999999999999999999999888899999999999999999999999999999876532111  0


Q ss_pred             CCCC---CCCChhhhhccccCCC--CCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCC
Q 019562          121 SNTS---QGVDPFELYSAFFGGS--DGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCD  195 (339)
Q Consensus       121 ~~~~---~~~~~~~~f~~fFg~~--~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~  195 (339)
                      ..++   .+.+..++|++||+.+  .+.|++.+.+.+... ......++.|+.++|.|||+|+|+|+++++.+++.+.|+
T Consensus        82 ~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~-~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  160 (382)
T PRK14291         82 QEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRK-TYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE  160 (382)
T ss_pred             ccccccccCCCHHHHHHHHHHhcccccccccccccccccc-ccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence            0111   1224457788775422  112222111000000 011234689999999999999999999999999999999


Q ss_pred             CCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCC
Q 019562          196 SCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVS  275 (339)
Q Consensus       196 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~  275 (339)
                      .|+|+|.........|+.|+|+|.++..    .+++++..+|+.|+|+|. +.+.|..|.|.+++.+.++++|.||||++
T Consensus       161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  235 (382)
T PRK14291        161 ACGGTGYDPGSGEKVCPTCGGSGEIYQR----GGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVD  235 (382)
T ss_pred             CCccccCCCCCCCccCCCCCCceEEEEe----cceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCC
Confidence            9999999988888999999999987664    256666789999999995 68899999999999999999999999999


Q ss_pred             CCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          276 NGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       276 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|++|+|+|+|++...++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       236 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~  297 (382)
T PRK14291        236 NGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVP  297 (382)
T ss_pred             CCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEe
Confidence            99999999999987767889999999999999999999999999999999999999999986

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.5e-62  Score=472.35  Aligned_cols=292  Identities=38%  Similarity=0.713  Sum_probs=245.0

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC
Q 019562           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~  119 (339)
                      |+...|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||+||++++.. +..
T Consensus         1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~-~~~   79 (378)
T PRK14283          1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDG-FSQ   79 (378)
T ss_pred             CCCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccc-ccc
Confidence            3457899999999999999999999999999999999988889999999999999999999999999999987652 111


Q ss_pred             CCCCCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCC
Q 019562          120 LSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (339)
Q Consensus       120 ~~~~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G  199 (339)
                      . ..+...+..++|..|++++...|..++..++.    .....++.|+.++|.|||+|+|+|+++++.+++.+.|+.|.|
T Consensus        80 ~-~~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~----~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G  154 (378)
T PRK14283         80 E-DIFNNINFEDIFQGFGFGIGNIFDMFGFGGGS----RHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNG  154 (378)
T ss_pred             c-ccccccCccccccccccchhhhccccccCCCC----CCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCc
Confidence            0 00001111222222221110111100000000    011346889999999999999999999999999999999999


Q ss_pred             CCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCE
Q 019562          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (339)
Q Consensus       200 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~  279 (339)
                      +|.........|+.|+|+|.++..++..+|++++..+|+.|.|+|+.+.+.|..|.|.+++.+.+.++|.||||+++|++
T Consensus       155 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~  234 (378)
T PRK14283        155 SRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSR  234 (378)
T ss_pred             cccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcE
Confidence            99998888899999999999999888889998888999999999999999999999999999999999999999999999


Q ss_pred             EEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       280 i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+|+|++...++.+|||+|+|.|++|+.|+|+|+||++++.|+|.+||+|+++.|+
T Consensus       235 i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~  292 (378)
T PRK14283        235 LRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVP  292 (378)
T ss_pred             EEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEE
Confidence            9999999987666789999999999999999999999999999999999999999986

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.2e-62  Score=470.82  Aligned_cols=279  Identities=42%  Similarity=0.803  Sum_probs=237.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~  120 (339)
                      +..|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+|+.+|+.||+||++++..+..++
T Consensus         2 ~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (371)
T PRK10767          2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG   81 (371)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCC
Confidence            3579999999999999999999999999999999997 466889999999999999999999999999998775321110


Q ss_pred             C-CCCCCC-Chh-hhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCC
Q 019562          121 S-NTSQGV-DPF-ELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (339)
Q Consensus       121 ~-~~~~~~-~~~-~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C  197 (339)
                      + .++.++ +.| ++|+.|||+.      .+  ..     .....++.|+.++|.|||||+|+|+++++.+++.+.|+.|
T Consensus        82 ~~~~~~~~~~~f~~~f~~~fgg~------~~--~~-----~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C  148 (371)
T PRK10767         82 GFGGGGGFGDIFGDIFGDIFGGG------RG--GG-----RQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTC  148 (371)
T ss_pred             CCCCccccccchhhhhhhhccCC------cc--cc-----CCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCC
Confidence            0 010111 212 3444444320      00  00     1123578999999999999999999999999999999999


Q ss_pred             CCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCC
Q 019562          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (339)
Q Consensus       198 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G  277 (339)
                      +|+|.........|+.|+|+|.++..+    |++++..+|+.|.|+|+++.+.|+.|.|.+++.+...++|.||||+++|
T Consensus       149 ~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G  224 (371)
T PRK10767        149 HGSGAKPGTSPKTCPTCHGAGQVRMQQ----GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTG  224 (371)
T ss_pred             CCcccCCCCCCccCCCCCCeeEEEEee----ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCC
Confidence            999999888888999999999876543    6666668999999999999999999999999999999999999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ++|+|+|+|++..+++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|++++|+
T Consensus       225 ~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~  284 (371)
T PRK10767        225 DRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVP  284 (371)
T ss_pred             cEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEe
Confidence            999999999987666789999999999999999999999999999999999999999985

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-61  Score=470.60  Aligned_cols=294  Identities=38%  Similarity=0.679  Sum_probs=247.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~  120 (339)
                      ...|||++|||+++||.+|||+|||+||++||||+|+ ++.++++|++|++||++|+||.+|++||+||+++++.+...+
T Consensus         3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14289          3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG   82 (386)
T ss_pred             ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence            4689999999999999999999999999999999997 457999999999999999999999999999998775321111


Q ss_pred             CCCCCCCChhhhhcc---ccCCCCCCCCCCCCCCCcccc-CCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCC
Q 019562          121 SNTSQGVDPFELYSA---FFGGSDGLFGGVGEAGGINFN-FGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDS  196 (339)
Q Consensus       121 ~~~~~~~~~~~~f~~---fFg~~~~~fg~~g~~~~~~~~-~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~  196 (339)
                      +.+..++++.++|+.   +|++.   |++.++.+.+... ......++.|+++.|.|||+|+|+|+++++.+++.+.|+.
T Consensus        83 ~~~~~~~~~~~~f~~f~~~fg~~---~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~  159 (386)
T PRK14289         83 GFSGEGMSMEDIFSMFGDIFGGH---GGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSH  159 (386)
T ss_pred             CCCCCCcChhhhhHHhhhhhccc---ccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCC
Confidence            001112333344433   35432   1111100000000 0112346889999999999999999999999999999999


Q ss_pred             CCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCC
Q 019562          197 CGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSN  276 (339)
Q Consensus       197 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~  276 (339)
                      |+|+|.........|+.|+|+|.++..+++++|++++..+|+.|.|+|+++...|..|.|.+++.+.+.++|.||+|+++
T Consensus       160 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~  239 (386)
T PRK14289        160 CHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAE  239 (386)
T ss_pred             CCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCC
Confidence            99999998888899999999999999889999999888999999999999999999999999999999999999999999


Q ss_pred             CCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEeec
Q 019562          277 GATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       277 G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      |++|+|+|+|++...++.+|||+|+|+|++|+.|.|+++||++++.|+|.+||+|+++.|+.
T Consensus       240 G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~  301 (386)
T PRK14289        240 GMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPT  301 (386)
T ss_pred             CCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeec
Confidence            99999999999876667899999999999999999999999999999999999999999873

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-61  Score=464.19  Aligned_cols=284  Identities=35%  Similarity=0.657  Sum_probs=237.3

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      .|||++|||+++||.+|||+|||+||++||||+++..  .++++|++|++||++|+|+.+|++||+||+++++.+..+.+
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~   82 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN   82 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence            6999999999999999999999999999999999743  68899999999999999999999999999987752110000


Q ss_pred             -CCCC-CCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCC
Q 019562          122 -NTSQ-GVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (339)
Q Consensus       122 -~~~~-~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G  199 (339)
                       .++. ..++.++|+.|||+.   +++.. .++... ....+.++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|
T Consensus        83 ~~~~~~~~~~~d~f~~~fg~~---~~~~~-~~~~~~-~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G  157 (365)
T PRK14290         83 WDNFTHFSDINDIFNQIFGGN---FGSDF-FSGFGN-QQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSG  157 (365)
T ss_pred             ccccccccchhHHHHHHhcCc---ccccc-cccccc-ccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCcc
Confidence             0011 124568899998752   11000 000000 0111234789999999999999999999999999999999999


Q ss_pred             CCccCCCCcccCCCCCCccEEEEeeecCCcce--eeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCC
Q 019562          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLI--SQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (339)
Q Consensus       200 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~--~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G  277 (339)
                      +|.... ...+|+.|+|+|.++..+.  +|++  ++..+|+.|.|+|+++.+.|+.|.|.+++.+.+.++|.||||+.+|
T Consensus       158 ~g~~~~-~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G  234 (365)
T PRK14290        158 TGAKNG-KLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDN  234 (365)
T ss_pred             ccCCCC-CCccCCCCCCcCEEEEEec--cCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCC
Confidence            999875 5789999999998776653  4444  3357999999999999999999999999999999999999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ++|+|+|+|+.  .++.+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       235 ~~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~  292 (365)
T PRK14290        235 LRLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIK  292 (365)
T ss_pred             cEEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEE
Confidence            99999999986  46789999999999999999999999999999999999999999986

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.7e-61  Score=465.79  Aligned_cols=284  Identities=35%  Similarity=0.685  Sum_probs=242.2

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCccc-CCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYD-GLS  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~-~~~  121 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+|+.+|+.||+||++++..... +++
T Consensus         2 ~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~   81 (372)
T PRK14300          2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG   81 (372)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCC
Confidence            3799999999999999999999999999999999987789999999999999999999999999999987753210 111


Q ss_pred             CCCCCC--ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCC
Q 019562          122 NTSQGV--DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (339)
Q Consensus       122 ~~~~~~--~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G  199 (339)
                      ++.+++  +..++|++||+++   |++.+.   .  .......++.|+.+.|.|||+|+|+|+++++.+.+.+.|+.|+|
T Consensus        82 g~~~~~~~~~~~~f~~~f~~~---~gg~~~---~--~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G  153 (372)
T PRK14300         82 GNHGGFHPDINDIFGDFFSDF---MGGSRR---S--RPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHG  153 (372)
T ss_pred             CCCCccccchhhhHHHHHHhh---cCCCCC---C--CCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCC
Confidence            111111  2335677777642   221110   0  00011246889999999999999999999999999999999999


Q ss_pred             CCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCE
Q 019562          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGAT  279 (339)
Q Consensus       200 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~  279 (339)
                      +|........+|+.|+|+|.++..    .|++++..+|+.|.|+|+++.+.|+.|.|.+++.+.+.++|.||||+++|++
T Consensus       154 ~g~~~~~~~~~C~~C~G~G~~~~~----~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  229 (372)
T PRK14300        154 SGSEKGETVTTCDACSGVGATRMQ----QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTR  229 (372)
T ss_pred             cccCCCCCCccCCCccCeEEEEEe----eceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcE
Confidence            999988888999999999987653    3677777899999999999999999999999999999999999999999999


Q ss_pred             EEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEeec
Q 019562          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       280 i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      |+|+|+|++...++.+|||+|+|.+++|+.|+|+|+||++++.|+|++||+|+++.|+-
T Consensus       230 i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~  288 (372)
T PRK14300        230 IRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPV  288 (372)
T ss_pred             EEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEec
Confidence            99999999876667899999999999999999999999999999999999999999863

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-60  Score=460.76  Aligned_cols=287  Identities=44%  Similarity=0.847  Sum_probs=248.4

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~  122 (339)
                      ..|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||+||+||.+|++||.||++++..+..  ..
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~--~~   79 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAG--FP   79 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCC--cC
Confidence            3699999999999999999999999999999999988889999999999999999999999999999987753210  00


Q ss_pred             CCCCC-ChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCC
Q 019562          123 TSQGV-DPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (339)
Q Consensus       123 ~~~~~-~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G  201 (339)
                      +..++ +..++|++||+++.    +.+..+ .... .....++.|+.++|.|||+|+|+|+++++.+++.+.|+.|+|+|
T Consensus        80 ~~~~~~~~~d~f~~~fg~~~----~~~~~~-~~~~-~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G  153 (374)
T PRK14293         80 DMGDMGGFADIFETFFSGFG----GAGGQG-GRRR-RRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSG  153 (374)
T ss_pred             CcccccchHHHHHHHhcccC----CCCCCC-cccc-ccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcC
Confidence            11111 22378888887421    111000 0000 11234688999999999999999999999999999999999999


Q ss_pred             ccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEE
Q 019562          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~  281 (339)
                      .........|+.|+|+|.++..+++++|++++..+|+.|.|+|+++.+.|..|.|.+++.+.+.++|.||||+++|++|+
T Consensus       154 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~  233 (374)
T PRK14293        154 AKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLR  233 (374)
T ss_pred             CCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEE
Confidence            99888889999999999999888999999988899999999999999999999999999999999999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      |+|+|++..++..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+
T Consensus       234 l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~  289 (374)
T PRK14293        234 VSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVD  289 (374)
T ss_pred             EccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEec
Confidence            99999986656678999999999999999999999999999999999999999986

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.5e-60  Score=459.58  Aligned_cols=282  Identities=36%  Similarity=0.687  Sum_probs=244.5

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCCC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNT  123 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~~  123 (339)
                      .|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||+||+||.+|+.||+||+++..+...++..+
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~   81 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG   81 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence            49999999999999999999999999999999998888999999999999999999999999999987642110010001


Q ss_pred             CCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCcc
Q 019562          124 SQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAK  203 (339)
Q Consensus       124 ~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~  203 (339)
                      ..++|+.++|++|||+..  +++  .. +     .....++.|+.+++.|||+|+|+|+++++.+++.+.|+.|+|+|..
T Consensus        82 ~~~~d~~d~f~~~fg~~~--~~~--~~-~-----~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~  151 (371)
T PRK14292         82 GMGFDPMDIFEQLFGGAG--FGG--GR-G-----RRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTE  151 (371)
T ss_pred             ccCCChHHHHHHhhCCCC--cCC--CC-C-----cccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccC
Confidence            112567789999997521  110  00 0     0123468999999999999999999999999999999999999997


Q ss_pred             CCC-CcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEE
Q 019562          204 SSN-CIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQI  282 (339)
Q Consensus       204 ~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l  282 (339)
                      ... ...+|+.|+|+|.++..+++.+|++++..+|+.|.|+|+.+...|..|.|.+++.....++|.||+|+.+|++|+|
T Consensus       152 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  231 (371)
T PRK14292        152 PGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRV  231 (371)
T ss_pred             CCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEE
Confidence            654 3789999999999988888888998888899999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       283 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|+|++... +. |||||+|.+++|+.|+|+|+||++++.|+|.|||+|+++.|+
T Consensus       232 ~G~G~~~~~-~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~  284 (371)
T PRK14292        232 AGMGNEGPG-GN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVP  284 (371)
T ss_pred             ecCcCCCCC-CC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEE
Confidence            999998643 33 999999999999999999999999999999999999999987

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.5e-57  Score=418.63  Aligned_cols=270  Identities=36%  Similarity=0.672  Sum_probs=238.4

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      .+..||++|||+++||++|||||||+||++||||+|++  +.++|++|++||||||||++|++||+||+++++.+..+++
T Consensus         2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g   79 (337)
T KOG0712|consen    2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGG   79 (337)
T ss_pred             cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCC
Confidence            35789999999999999999999999999999999965  8899999999999999999999999999999865432211


Q ss_pred             CCCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCC
Q 019562          122 NTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTG  201 (339)
Q Consensus       122 ~~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G  201 (339)
                        +.  .    |++||+     ||+.++         +.+.++.|+.+.|.|||+|+|.|.++++.+++..+|+.|.|+|
T Consensus        80 --~~--~----f~~~F~-----~g~~~~---------~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsG  137 (337)
T KOG0712|consen   80 --FG--G----FSQFFG-----FGGNGG---------RGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSG  137 (337)
T ss_pred             --Cc--c----HHHhcc-----CCCcCc---------cccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCC
Confidence              11  1    788887     222211         1223499999999999999999999999999999999999999


Q ss_pred             ccCCCCcccCCCCCCccEEEEeeecCCcceeee-ecCCCCCCccEE--EeecccccCCceEEeeceEEEEEeCCCCCCCC
Q 019562          202 AKSSNCIQSCKACWGRGGVLKTQRTPFGLISQV-STCSKCGGDGKI--IIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (339)
Q Consensus       202 ~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~-~~C~~C~G~G~~--~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~  278 (339)
                      ....... .|+.|.|+|..+...++.+|+.++. ..|..|+|+|..  ..+.|+.|.|.+++...+.++|.|++|+++++
T Consensus       138 gksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~  216 (337)
T KOG0712|consen  138 GKSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQ  216 (337)
T ss_pred             CCCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccc
Confidence            9876544 8999999999999999999988887 689999999997  57899999999999999999999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|++.|++++.. +..+||++|.|..+.|+.|.|.++||+++.+|+|.|||+|+.+.+.
T Consensus       217 ki~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~  274 (337)
T KOG0712|consen  217 KITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWE  274 (337)
T ss_pred             eeeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEE
Confidence            999999999865 4559999999999999999999999999999999999999887664

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-45  Score=342.82  Aligned_cols=212  Identities=39%  Similarity=0.703  Sum_probs=170.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC--
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL--  120 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~--  120 (339)
                      ..|||++|||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||++|+.||+||++++..++.+.  
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~   82 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP   82 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence            579999999999999999999999999999999998888999999999999999999999999999987654221110  


Q ss_pred             ----CCCCCC---CChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeee
Q 019562          121 ----SNTSQG---VDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFET  193 (339)
Q Consensus       121 ----~~~~~~---~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~  193 (339)
                          ..++.+   .+..++|++|||+.+ .+++.+   ...........++.|+.+++.|||+|++.|+++.+.+.    
T Consensus        83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~~-~~~~~g---~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~----  154 (291)
T PRK14299         83 GPPGGGDFSGFNVGDFSDFFQQLFGGRG-GFGGFG---DLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA----  154 (291)
T ss_pred             CCCCCCCccccCcCCHHHHHHHHhCCCC-CCCCcc---cccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC----
Confidence                011111   234478888887421 111110   00000011235688999999999999999999887542    


Q ss_pred             CCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCC
Q 019562          194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG  273 (339)
Q Consensus       194 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G  273 (339)
                                                                                           .+.++|.||||
T Consensus       155 ---------------------------------------------------------------------g~~~~V~Ip~G  165 (291)
T PRK14299        155 ---------------------------------------------------------------------GERLSVRIPPG  165 (291)
T ss_pred             ---------------------------------------------------------------------CEEEEEecCCC
Confidence                                                                                 13578999999


Q ss_pred             CCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       274 ~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +++|++|+++|+|++.      |||+|+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+
T Consensus       166 ~~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~  223 (291)
T PRK14299        166 VREGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVM  223 (291)
T ss_pred             cCCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEE
Confidence            9999999999999862      999999999999999999999999999999999999999986

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=9.3e-44  Score=335.56  Aligned_cols=223  Identities=30%  Similarity=0.513  Sum_probs=176.6

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccC----cCCcccC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG----ITGEYDG  119 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g----~~~~~~~  119 (339)
                      .|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||+||+.+    +......
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~~   83 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQH   83 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccccccc
Confidence            799999999999999999999999999999999988889999999999999999999999999998642    2211000


Q ss_pred             CCC-CCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCC
Q 019562          120 LSN-TSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCG  198 (339)
Q Consensus       120 ~~~-~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~  198 (339)
                      +++ .....+..++|+.|||+.    ++  ..  .    .....++.|+.+++.|||+|+++|+.+++.+++..    | 
T Consensus        84 ~~~~~~~~~~~~~~f~~~~g~~----~~--~~--~----~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~----~-  146 (306)
T PRK10266         84 GDGQSFNAEDFDDIFSSIFGQH----AR--QS--R----QRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV----Y-  146 (306)
T ss_pred             CCCCCCCCCCHHHHHHHHhCCC----CC--CC--C----CCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----c-
Confidence            001 111124457888888641    10  00  0    01234688999999999999999999998876431    1 


Q ss_pred             CCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCC
Q 019562          199 GTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGA  278 (339)
Q Consensus       199 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~  278 (339)
                                      .|.|.+..                                      ...+.++|.||+|+++|+
T Consensus       147 ----------------~g~G~~~~--------------------------------------~~~~~~~V~Ip~G~~~G~  172 (306)
T PRK10266        147 ----------------NAFGMIEQ--------------------------------------EIPKTLNVKIPAGVGNGQ  172 (306)
T ss_pred             ----------------cCCCeEEE--------------------------------------eeeEEEEEEECCCCcCCc
Confidence                            12221100                                      113578999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      +|+|+|+|++...+..+|||+|+|.|++|+.|+|+|+||++++.|+|.+||+|+++.|+
T Consensus       173 ~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~  231 (306)
T PRK10266        173 RIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVP  231 (306)
T ss_pred             EEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEee
Confidence            99999999987666778999999999999999999999999999999999999999986

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.5e-42  Score=317.97  Aligned_cols=245  Identities=43%  Similarity=0.796  Sum_probs=217.9

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCCCC
Q 019562           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSNTS  124 (339)
Q Consensus        45 d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~~~  124 (339)
                      |||++|||+++|+..|||+||++||++||||.|.++++.++|++|.+|||+|+|+++|+.||.+|..+.        . .
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~--------~-~  114 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH--------G-E  114 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc--------c-c
Confidence            999999999999999999999999999999999999999999999999999999999999999998751        0 1


Q ss_pred             CCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccC
Q 019562          125 QGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKS  204 (339)
Q Consensus       125 ~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~  204 (339)
                      .+.+++++|..+|++.                 ..+...+.+..+.+.++|++|..|..+.+.+.....|..|.|.|...
T Consensus       115 ~~g~~~~~~~~~~~~~-----------------~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~  177 (288)
T KOG0715|consen  115 FGGNPFDVFLEFFGGK-----------------MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEE  177 (288)
T ss_pred             ccCCccchHHHhhccc-----------------ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCccc
Confidence            1227788888888650                 11234567888889999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEcc
Q 019562          205 SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG  284 (339)
Q Consensus       205 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g  284 (339)
                      +.....|..|.|.|.+......+|..+    +|..|.|.|.+..+.|..|.|.+.+...+.+.|.+|+|+.++.+|++.+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~f~~~----~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~  253 (288)
T KOG0715|consen  178 GAKRESCKTCSGRGLVSNPKEDPFILY----TCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAG  253 (288)
T ss_pred             ccccccchhhhCcccccccccCCccee----ecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEec
Confidence            999999999999997766555555443    8999999999999899999999988889999999999999999999999


Q ss_pred             CCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhh
Q 019562          285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTE  327 (339)
Q Consensus       285 ~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~e  327 (339)
                      .|..        ||+|.+.|..++.|+|+|.|++++..|++.+
T Consensus       254 ~~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  254 HGND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             CCcc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence            9863        9999999999999999999999999998764

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.6e-39  Score=294.64  Aligned_cols=257  Identities=34%  Similarity=0.495  Sum_probs=187.5

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccC
Q 019562           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDG  119 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~  119 (339)
                      ...+|||++|||+++|+..|||+||||||++||||+|+ +|.|.+.|++|+.||+|||||++|+.||+||+++++.....
T Consensus        13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~   92 (336)
T KOG0713|consen   13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKD   92 (336)
T ss_pred             hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccc
Confidence            34689999999999999999999999999999999998 68999999999999999999999999999999999753211


Q ss_pred             CCCCCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCC
Q 019562          120 LSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGG  199 (339)
Q Consensus       120 ~~~~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G  199 (339)
                      .+++..+   .++|+.||+.++..+++.  .      ......+|.++...+..++++.|.|......-.+.+.|. |.|
T Consensus        93 ~~~g~~~---~~~f~~~f~dfg~~~~g~--~------~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g  160 (336)
T KOG0713|consen   93 GEGGGGG---NDIFSAFFGDFGVTVGGN--P------LEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APG  160 (336)
T ss_pred             cccCCcc---cchHHHhhcccccccCCC--c------ccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCc
Confidence            1111111   466777887643222211  0      012256789999999999999998875443322222221 111


Q ss_pred             CCccCCCCcccCCCCCCccEEEEeeecCCcc--eeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCC
Q 019562          200 TGAKSSNCIQSCKACWGRGGVLKTQRTPFGL--ISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (339)
Q Consensus       200 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~--~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G  277 (339)
                        ..         .|+-+-.. ..++...|.  +.|...|..|.+              .+.......+++.+..+...+
T Consensus       161 --~~---------~~~~~~~~-~~~~~~~g~~~~~q~~~~~~~~~--------------~k~~~e~~~~~~~~~~~~~~~  214 (336)
T KOG0713|consen  161 --TR---------KCNCRLEM-FTQQEGPGRFQMLQEAVCDECPN--------------VKLVLEEDPLEVEFERGDADG  214 (336)
T ss_pred             --cc---------ccCChhhh-eeeccCCChhhhhhhhhhccCCc--------------cceeecCCceeeeeeecccCC
Confidence              10         11111111 111112222  223345666654              445666788999999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEe
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV  336 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V  336 (339)
                      ....+..+|.+.. -+.+||+++.+...+|+.|.|+++|+++++.|++.++|.|+..++
T Consensus       215 ~~~~~~~~~~~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~  272 (336)
T KOG0713|consen  215 PEEIFELEGEPHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEI  272 (336)
T ss_pred             ceeeeeccCCcce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHh
Confidence            9999999998854 468999999999999999999999999999999999999987654

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.96  E-value=1.5e-28  Score=246.15  Aligned_cols=78  Identities=18%  Similarity=0.128  Sum_probs=71.0

Q ss_pred             eEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          258 GEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       258 g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ..+...+.++|.||+|+++|++|+|+|+|+... ++ .|||||+|.+++|+.|+|+|+||++++.|+|.+||||+++.|+
T Consensus       691 ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIp  768 (871)
T TIGR03835       691 STTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVF  768 (871)
T ss_pred             ceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEee
Confidence            345556799999999999999999999999753 33 4999999999999999999999999999999999999999987

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=2.6e-20  Score=173.80  Aligned_cols=235  Identities=32%  Similarity=0.468  Sum_probs=158.8

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~  120 (339)
                      ..|||++|+|.++|+.+||++||+++|++||||+++.+  .+.++|++|++||++|+|+.+|.+||+||++++.......
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~   81 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS   81 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence            47999999999999999999999999999999998866  5667899999999999999999999999997766411100


Q ss_pred             C---C---CCCCCChhhhhccccCCCCCCCCC------------------CCCCCCccccC----------CCCCCCCcc
Q 019562          121 S---N---TSQGVDPFELYSAFFGGSDGLFGG------------------VGEAGGINFNF----------GNKGNFGLD  166 (339)
Q Consensus       121 ~---~---~~~~~~~~~~f~~fFg~~~~~fg~------------------~g~~~~~~~~~----------~~~~~~g~d  166 (339)
                      .   .   .....++.+.|.+|||....+...                  .+.......+.          .....+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
T KOG0714|consen   82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP  161 (306)
T ss_pred             CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence            0   0   012234567788888844332211                  00000000000          000011111


Q ss_pred             eEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEE
Q 019562          167 IRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKI  246 (339)
Q Consensus       167 i~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  246 (339)
                      +...+.+++++.+.|..+...+.+...                                                     
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------  188 (306)
T KOG0714|consen  162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------------  188 (306)
T ss_pred             ccCCcceeHHHhccccceeeecccccc-----------------------------------------------------
Confidence            222333355555555555544332110                                                     


Q ss_pred             EeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe--cccC
Q 019562          247 IIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK--ISVD  324 (339)
Q Consensus       247 ~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~--~~I~  324 (339)
                           ... +.........+.+.+++++..|+.+....+|..... ..+-++++.+..++|..|.+.+.+|...  ..|+
T Consensus       189 -----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s  261 (306)
T KOG0714|consen  189 -----TSN-GREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPG-ILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEIS  261 (306)
T ss_pred             -----cCC-cccccCccceeEEeccCCcccccceeccccccccCC-cCcceeEEEEecCCcccccCCCccceecccceee
Confidence                 000 000122346678999999999999999999986542 5677888889999999999999999999  9999


Q ss_pred             hhhhhcCCeEEee
Q 019562          325 YTEAILGTSMEVG  337 (339)
Q Consensus       325 l~eAllG~~~~V~  337 (339)
                      +.+|++|....|+
T Consensus       262 ~~~~~~~~~~~~~  274 (306)
T KOG0714|consen  262 LKEALLGVTVFVP  274 (306)
T ss_pred             hhhhhcCcceeee
Confidence            9999999998775

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=3.7e-20  Score=166.06  Aligned_cols=72  Identities=54%  Similarity=0.885  Sum_probs=68.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      ..|+|++|||+++|+.++||||||+||++||||++++ |++.++|++||+||+||+||.+|.+||+||+.++.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            5799999999999999999999999999999999985 88999999999999999999999999999998765

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.79  E-value=1.4e-19  Score=185.93  Aligned_cols=76  Identities=38%  Similarity=0.635  Sum_probs=70.7

Q ss_pred             ccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        39 ~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      .+..+.+||++|||+++||..|||+|||+||++||||+++++.+.++|++|++||+|||||.+|+.||+||..|+.
T Consensus       568 ~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~  643 (1136)
T PTZ00341        568 IEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK  643 (1136)
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence            3345789999999999999999999999999999999998777899999999999999999999999999998765

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=1.6e-19  Score=167.16  Aligned_cols=90  Identities=46%  Similarity=0.744  Sum_probs=79.5

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL  120 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~  120 (339)
                      ...|||++|||+.+||..||++|||+.|++||||+|| +|.|.++|+.+.+||+||+|+.+|+.||++|..+....    
T Consensus         3 ~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~----   78 (296)
T KOG0691|consen    3 KDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ----   78 (296)
T ss_pred             ccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch----
Confidence            3689999999999999999999999999999999998 78899999999999999999999999999998765321    


Q ss_pred             CCCCCCCChhhhhccccCC
Q 019562          121 SNTSQGVDPFELYSAFFGG  139 (339)
Q Consensus       121 ~~~~~~~~~~~~f~~fFg~  139 (339)
                          ...+++++|.+-|++
T Consensus        79 ----~~~d~~~~~r~~f~~   93 (296)
T KOG0691|consen   79 ----GREDQADGFRKKFGS   93 (296)
T ss_pred             ----hhhhHHHHHHHHhhh
Confidence                235777888877763

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=1.6e-19  Score=171.90  Aligned_cols=72  Identities=50%  Similarity=0.899  Sum_probs=68.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~----~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      +.|||.+|+|+++||.+||++|||++++.||||+..++    .|++.|+.|.+||||||||.+|++||.||++||+
T Consensus         8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            46999999999999999999999999999999998654    4899999999999999999999999999999998

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=6.6e-18  Score=150.78  Aligned_cols=70  Identities=59%  Similarity=0.882  Sum_probs=64.6

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHhhccCchhhhhhhccc
Q 019562           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~f~~i~~Ay~vL~d~~~r~~yd~~G  109 (339)
                      +....|||+||||+++|+.+||++|||++|++||||+++...  +.++|+.|++||++|+|+.+|+.||+++
T Consensus         2 ~~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             chhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            345689999999999999999999999999999999998543  8999999999999999999999999973

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=1.5e-18  Score=165.18  Aligned_cols=75  Identities=44%  Similarity=0.677  Sum_probs=68.2

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE  116 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~  116 (339)
                      +.+.||++|||.++|+..|||++||+||++||||+|++  .++.++|+.|+.||+|||||+.|++||.+-++-|.+.
T Consensus         6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~   82 (508)
T KOG0717|consen    6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK   82 (508)
T ss_pred             hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999885  4688999999999999999999999999887666543

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.72  E-value=3.8e-18  Score=123.94  Aligned_cols=62  Identities=48%  Similarity=0.817  Sum_probs=59.1

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHhhccCchhhhhhh
Q 019562           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG--AEEKFKEISSAYEVLSDDEKRSVYD  106 (339)
Q Consensus        45 d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~f~~i~~Ay~vL~d~~~r~~yd  106 (339)
                      |||+||||+++++.++||++|+++++++|||++....  +.+.|+.|++||++|++|.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987655  8899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.70  E-value=1.8e-17  Score=153.49  Aligned_cols=75  Identities=48%  Similarity=0.736  Sum_probs=66.8

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc----chHHHHHHHHHHHhhccCchhhhhhhcccccCcCC
Q 019562           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~----~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~  115 (339)
                      .+..+|||+||||.++|+..||.||||+||.+||||...+.    .++++|..|..|-|||+||++|+.||+ |+..+..
T Consensus       390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~  468 (504)
T KOG0624|consen  390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDP  468 (504)
T ss_pred             HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCCh
Confidence            34578999999999999999999999999999999976643    488999999999999999999999998 6666654

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.68  E-value=2.8e-17  Score=144.24  Aligned_cols=69  Identities=46%  Similarity=0.762  Sum_probs=64.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC---CcchHHHHHHHHHHHhhccCchhhhhhhccccc
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK---SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~---~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~  111 (339)
                      .+|+|++|||.++|+..+|++||++||++||||+++   ..++.++|+.++.||+||+|.++|++||+.|.-
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i   84 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI   84 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence            359999999999999999999999999999999995   246899999999999999999999999998864

>PHA03102 Small T antigen; Reviewed

Probab=99.67  E-value=5.3e-17  Score=136.81  Aligned_cols=84  Identities=24%  Similarity=0.325  Sum_probs=71.3

Q ss_pred             cCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           44 TDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        44 ~d~y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..+|++|||+++|  |.+|||+|||++|+++|||+++   ..++|++|++||++|+|+.+|..||.+|+......     
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg---~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~-----   76 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG---DEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE-----   76 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc---hhHHHHHHHHHHHHHhhHHHhccccccCCcccccc-----
Confidence            5689999999999  9999999999999999999973   46899999999999999999999999998654321     


Q ss_pred             CCCCCCChhhhhccccCC
Q 019562          122 NTSQGVDPFELYSAFFGG  139 (339)
Q Consensus       122 ~~~~~~~~~~~f~~fFg~  139 (339)
                          ...+.++|...||+
T Consensus        77 ----~~~~~~~f~~~fg~   90 (153)
T PHA03102         77 ----EDVPSGYVGATFGD   90 (153)
T ss_pred             ----cccHHHHhhhhcCC
Confidence                12267777777764

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.64  E-value=3e-16  Score=112.27  Aligned_cols=58  Identities=67%  Similarity=0.969  Sum_probs=54.1

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC--CcchHHHHHHHHHHHhhccCchh
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEK  101 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~--~~~~~~~f~~i~~Ay~vL~d~~~  101 (339)
                      .|||++|||+++++.++||+||++|++++|||++.  .+.+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999999999987  56789999999999999999853

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.62  E-value=4.5e-16  Score=135.53  Aligned_cols=70  Identities=37%  Similarity=0.686  Sum_probs=65.4

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhccCchhhhhhhccccc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~  111 (339)
                      ...|+|+||||+++||+.|||||||+|++++|||++++ .+.++.|..|++||+.|+|+..|..|.+||..
T Consensus        97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P  167 (230)
T KOG0721|consen   97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP  167 (230)
T ss_pred             hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence            35799999999999999999999999999999999987 56778889999999999999999999999974

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.61  E-value=6.1e-16  Score=146.86  Aligned_cols=121  Identities=29%  Similarity=0.621  Sum_probs=95.8

Q ss_pred             eeeeCCCCCCCCccCC-------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee-------------
Q 019562          190 CFETCDSCGGTGAKSS-------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID-------------  249 (339)
Q Consensus       190 ~~~~C~~C~G~G~~~~-------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~-------------  249 (339)
                      ..+.|++|+|+|....       ..+++|+.|+|+|+++.            .+|+.|+|.|++...             
T Consensus       158 ~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~------------~pC~~C~G~G~v~~~~~i~V~IPaGv~~  225 (371)
T COG0484         158 DPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIK------------DPCGKCKGKGRVKKKKSISVNIPAGVDD  225 (371)
T ss_pred             CCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECC------------CCCCCCCCCCeEeeeeEEEEECCCCCcc
Confidence            4678999999998533       33789999999999875            799999999996540             


Q ss_pred             --------------------------------ccc-----------------ccCCceEEee-ceEEEEEeCCCCCCCCE
Q 019562          250 --------------------------------HCR-----------------RCGGNGEVQS-KRSMKVVIPPGVSNGAT  279 (339)
Q Consensus       250 --------------------------------~C~-----------------~C~g~g~~~~-~~~l~v~Ip~G~~~G~~  279 (339)
                                                      ...                 ..++...+.+ ...++|+||+|+++|++
T Consensus       226 g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G~~  305 (371)
T COG0484         226 GDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEV  305 (371)
T ss_pred             CCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccCcE
Confidence                                            111                 1233333332 33489999999999999


Q ss_pred             EEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecc
Q 019562          280 MQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (339)
Q Consensus       280 i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~  322 (339)
                      ++|+|+|++..++...|||||+|.|+.|..+..++..|+.++.
T Consensus       306 ~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~  348 (371)
T COG0484         306 FRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKELLEEFA  348 (371)
T ss_pred             EEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            9999999998777778999999999999999988888776654

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.61  E-value=9.6e-16  Score=107.64  Aligned_cols=54  Identities=67%  Similarity=0.987  Sum_probs=51.3

Q ss_pred             CcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-cchHHHHHHHHHHHhhccC
Q 019562           45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSD   98 (339)
Q Consensus        45 d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-~~~~~~f~~i~~Ay~vL~d   98 (339)
                      |||++|||+++++.++||++|++|+++||||++.. ..+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999999999876 6789999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.59  E-value=1.2e-15  Score=144.32  Aligned_cols=94  Identities=39%  Similarity=0.650  Sum_probs=78.6

Q ss_pred             ccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           37 GMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        37 ~~~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      .+.++..+|||.|||++++|+..|||+|||++|+.||||++..  .+++.+|+++.+||.+|+||.+|..||.--.  +.
T Consensus       366 aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~d--le  443 (486)
T KOG0550|consen  366 ALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQD--LE  443 (486)
T ss_pred             HHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccc--hh
Confidence            4677788999999999999999999999999999999999863  5789999999999999999999999997321  11


Q ss_pred             CcccCCCCCCCCCChhhhhccc
Q 019562          115 GEYDGLSNTSQGVDPFELYSAF  136 (339)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~f~~f  136 (339)
                      ..    +.+..+++|+++|..|
T Consensus       444 ~~----~~~~a~~dp~~~~~a~  461 (486)
T KOG0550|consen  444 EV----GSGGAGFDPFNIFRAF  461 (486)
T ss_pred             hh----cCCCcCcChhhhhhhc
Confidence            11    1122678999988877

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=3.4e-15  Score=144.69  Aligned_cols=119  Identities=29%  Similarity=0.561  Sum_probs=90.8

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|+|+|+++.            ..|+.|+|.|++...            
T Consensus       169 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  236 (369)
T PRK14282        169 YVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPG------------EYCHECGGSGRIRRRVRTTVKIPAGVE  236 (369)
T ss_pred             CcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCC------------CCCCCCCCceeEEEEEEEEEEeCCCCC
Confidence            467999999997532         23579999999998754            679999999865430            


Q ss_pred             --------------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNG  277 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G  277 (339)
                                                                        .=..+++...+..  ...++|.||+|+++|
T Consensus       237 ~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g  316 (369)
T PRK14282        237 DGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPE  316 (369)
T ss_pred             CCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCC
Confidence                                                              0002233333332  245799999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      ++++|+|+|++....+.+|||||+|+|+.|+.|++++.+|+.++
T Consensus       317 ~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l  360 (369)
T PRK14282        317 TVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKEL  360 (369)
T ss_pred             CEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            99999999998654456899999999999999999999987664

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=1.2e-14  Score=140.69  Aligned_cols=119  Identities=26%  Similarity=0.614  Sum_probs=92.6

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|.|.|+++.            .+|+.|+|+|++...            
T Consensus       165 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  232 (365)
T PRK14290        165 LITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPE------------EKCPRCNGTGTVVVNEDISVKIPKGAT  232 (365)
T ss_pred             CccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEcc------------CCCCCCCCceeEEEeeEEEEEECCCCC
Confidence            468999999997532         12579999999998754            789999999986530            


Q ss_pred             ------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCCEE
Q 019562          250 ------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGATM  280 (339)
Q Consensus       250 ------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~~i  280 (339)
                                                                      .=..+++...+.. ...++|.||+|+++|+++
T Consensus       233 ~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~i  312 (365)
T PRK14290        233 DNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVL  312 (365)
T ss_pred             CCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEE
Confidence                                                            0012233333332 345799999999999999


Q ss_pred             EEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       281 ~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +|+|+|++...+..+|||||+|+|.+|+.|++++.+|+.++
T Consensus       313 ri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        313 KIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            99999998655556899999999999999999999988775

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.53  E-value=8.9e-15  Score=141.98  Aligned_cols=120  Identities=26%  Similarity=0.530  Sum_probs=90.6

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ..+.+|+.|+|+|+++.            .+|+.|.|.|++...            
T Consensus       158 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IppG~~  225 (377)
T PRK14298        158 PKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIE------------SPCPVCSGTGKVRKTRKITVNVPAGAD  225 (377)
T ss_pred             CCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccC------------CCCCCCCCccEEEEEEEEEecCCCCCC
Confidence            357999999997532         23678999999998754            679999999876430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|+||+|+++|+
T Consensus       226 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~  305 (377)
T PRK14298        226 SGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHS  305 (377)
T ss_pred             CCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCC
Confidence                                                              0012233333322 2346899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecc
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~  322 (339)
                      +++|+|+|++...++.+|||||+|+|..|+.|++++.+|+.++.
T Consensus       306 ~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~  349 (377)
T PRK14298        306 VFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREFD  349 (377)
T ss_pred             EEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999986555568999999999999999999988877653

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.52  E-value=1.5e-14  Score=139.96  Aligned_cols=120  Identities=25%  Similarity=0.530  Sum_probs=90.5

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     +.+.+|+.|+|+|+++.            ..|+.|.|.|++...                
T Consensus       161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  228 (366)
T PRK14294        161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV------------SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSR  228 (366)
T ss_pred             cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC------------cCCCCCCCceEeecceeEEEecCCCCcCCcE
Confidence            357999999987531     24678999999998754            679999998876430                


Q ss_pred             ----------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCCEEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGATMQI  282 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~~i~l  282 (339)
                                                                    .=..+++...+.. ...++|.||+|+++|++|+|
T Consensus       229 i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri  308 (366)
T PRK14294        229 LRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRF  308 (366)
T ss_pred             EEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEE
Confidence                                                          0012233333332 23458999999999999999


Q ss_pred             ccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecc
Q 019562          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (339)
Q Consensus       283 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~  322 (339)
                      +|+|++...+..+|||||+|+|..|+.|.+++.+|+.++.
T Consensus       309 ~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  348 (366)
T PRK14294        309 KGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFA  348 (366)
T ss_pred             CCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999986655568999999999999999999998887754

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.51  E-value=2.4e-14  Score=138.90  Aligned_cols=119  Identities=29%  Similarity=0.642  Sum_probs=87.9

Q ss_pred             eeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee-----------------
Q 019562          192 ETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID-----------------  249 (339)
Q Consensus       192 ~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~-----------------  249 (339)
                      ..|+.|+|+|....     ..+.+|+.|+|+|+++.            .+|+.|.|.|++...                 
T Consensus       160 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i  227 (371)
T PRK10767        160 KTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK------------DPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI  227 (371)
T ss_pred             ccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC------------CCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence            57888888886421     24568888888887654            678888888876430                 


Q ss_pred             ---------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCCEEEEc
Q 019562          250 ---------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGATMQIR  283 (339)
Q Consensus       250 ---------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~~i~l~  283 (339)
                                                                   .=..+++...+.. ...++|.||+|+++|++++|+
T Consensus       228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~  307 (371)
T PRK10767        228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR  307 (371)
T ss_pred             EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence                                                         0001222222211 225789999999999999999


Q ss_pred             cCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecc
Q 019562          284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (339)
Q Consensus       284 g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~  322 (339)
                      |+|++...++.+|||||+|+|..|+.|++++.+|+.++.
T Consensus       308 g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~  346 (371)
T PRK10767        308 GKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEFE  346 (371)
T ss_pred             CCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999986555568999999999999999999999877754

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=1.9e-14  Score=139.21  Aligned_cols=119  Identities=21%  Similarity=0.546  Sum_probs=91.1

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     +.+.+|+.|.|+|+++.            .+|..|+|.|.+...                
T Consensus       163 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  230 (365)
T PRK14285        163 PSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIIS------------NPCKSCKGKGSLKKKETIELKIPAGIDDNQQ  230 (365)
T ss_pred             CccCCCccCceeEEecCceeEEeeecCCCCCcccccC------------CCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence            457999999987532     34789999999998765            689999999976430                


Q ss_pred             ----------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCCCEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G~~i~  281 (339)
                                                                    .=..+++...+..  ...++|.||+|+++|++++
T Consensus       231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~ir  310 (365)
T PRK14285        231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII  310 (365)
T ss_pred             EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEE
Confidence                                                          0012233333332  2368999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      |+|+|++.......|||||+|+|++|+.|.+++..|+.++
T Consensus       311 l~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l  350 (365)
T PRK14285        311 IKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLENL  350 (365)
T ss_pred             ECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999998655455799999999999999999988776654

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=2.6e-14  Score=138.60  Aligned_cols=119  Identities=29%  Similarity=0.633  Sum_probs=90.8

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     +...+|+.|+|.|+++.            .+|+.|.|.|++...                
T Consensus       162 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  229 (372)
T PRK14300        162 VTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIK------------NPCKKCHGMGRYHKQRNLSVNIPAGVENGTR  229 (372)
T ss_pred             CccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeC------------CCCCCCCCceEEEeeEEEEEEECCCCCCCcE
Confidence            467999999997632     24679999999998865            789999999987430                


Q ss_pred             ----------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCCCEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G~~i~  281 (339)
                                                                    .=..+++...+..  ...++|.||+|+++|++|+
T Consensus       230 i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~ir  309 (372)
T PRK14300        230 IRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLR  309 (372)
T ss_pred             EEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEE
Confidence                                                          0002233333333  2478999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      |+|+|++...+..+|||||+|+|+.|..|..++..++.++
T Consensus       310 i~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l  349 (372)
T PRK14300        310 LRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQRELLEEF  349 (372)
T ss_pred             ECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999998655557899999999999999888777766554

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=2.9e-14  Score=138.30  Aligned_cols=120  Identities=28%  Similarity=0.533  Sum_probs=89.5

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     +.+.+|+.|+|+|+++.            .+|+.|.|.|++...                
T Consensus       161 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  228 (373)
T PRK14301        161 PETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT------------HPCPKCKGSGIVQQTRELKVRIPAGVDTGSR  228 (373)
T ss_pred             CcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC------------CCCCCCCCCceeccceEEEEEeCCCCcCCCE
Confidence            357999999987532     23678999999998764            679999998876430                


Q ss_pred             ----------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCCEEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGATMQI  282 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~~i~l  282 (339)
                                                                    .=..+++...+.. ...++|.||+|+++|++++|
T Consensus       229 i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~ri  308 (373)
T PRK14301        229 LRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFRL  308 (373)
T ss_pred             EEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEEE
Confidence                                                          0012233333322 23479999999999999999


Q ss_pred             ccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecc
Q 019562          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (339)
Q Consensus       283 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~  322 (339)
                      +|+|++...++.+|||||+|+|..|+.+..++.+++.++.
T Consensus       309 ~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~  348 (373)
T PRK14301        309 RGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLREFE  348 (373)
T ss_pred             cCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999997655568999999999999999888877766543

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.49  E-value=4.6e-14  Score=137.11  Aligned_cols=119  Identities=28%  Similarity=0.594  Sum_probs=90.4

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|+|+|+++.            .+|+.|+|.|++...            
T Consensus       156 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  223 (378)
T PRK14278        156 PVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIP------------DPCHECAGDGRVRARREITVKIPAGVG  223 (378)
T ss_pred             ceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeC------------CCCCCCCCceeEecceEEEEEECCCCC
Confidence            357999999997522         23578999999998765            679999999976430            


Q ss_pred             --------------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNG  277 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G  277 (339)
                                                                        .=..+++...+..  ...++|.||+|+++|
T Consensus       224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g  303 (378)
T PRK14278        224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG  303 (378)
T ss_pred             CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence                                                              0112344444432  456899999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      ++++|+|+|++....+.+|||||+|+|..|..+..+...++.++
T Consensus       304 ~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~  347 (378)
T PRK14278        304 SVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIELLREL  347 (378)
T ss_pred             cEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence            99999999998755556899999999999998887777666554

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.48  E-value=3.5e-14  Score=138.54  Aligned_cols=119  Identities=27%  Similarity=0.594  Sum_probs=91.4

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            .+|+.|.|.|++...                
T Consensus       175 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  242 (391)
T PRK14284        175 IKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT------------DPCSVCRGQGRIKDKRSVHVHIPAGVDSGMR  242 (391)
T ss_pred             CeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC------------CcCCCCCCcceecceEEEEEEECCCCCCCCE
Confidence            457999999987531     24679999999998764            679999999876420                


Q ss_pred             ----------------------------------------------cccccCCceEEee---ceEEEEEeCCCCCCCCEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS---KRSMKVVIPPGVSNGATM  280 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~---~~~l~v~Ip~G~~~G~~i  280 (339)
                                                                    .=..+++...+..   ...++|.||+|+++|+++
T Consensus       243 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~  322 (391)
T PRK14284        243 LKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTIL  322 (391)
T ss_pred             EEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEE
Confidence                                                          0112344444432   257899999999999999


Q ss_pred             EEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       281 ~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +|+|+|++...+..+|||||+|+|..|+.++.++.+|+.++
T Consensus       323 ~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l  363 (391)
T PRK14284        323 KVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQF  363 (391)
T ss_pred             EECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Confidence            99999999765557899999999999999998887776654

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.48  E-value=4.4e-14  Score=136.95  Aligned_cols=119  Identities=27%  Similarity=0.525  Sum_probs=88.6

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     ....+|+.|.|+|+++.            .+|+.|+|.|.+...                
T Consensus       167 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~  234 (372)
T PRK14286        167 PTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS------------NPCKTCGGQGLQEKRRTINIKIPPGVETGSR  234 (372)
T ss_pred             CccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec------------ccCCCCCCCcEEecceEEEEEECCCCCCCCE
Confidence            357999999987522     24678999999998765            679999999876530                


Q ss_pred             --------cc--------------------------------------cccCCceEEee--ceEEEEEeCCCCCCCCEEE
Q 019562          250 --------HC--------------------------------------RRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       250 --------~C--------------------------------------~~C~g~g~~~~--~~~l~v~Ip~G~~~G~~i~  281 (339)
                              ..                                      ..+++...+..  ...++|.||+|+++|++++
T Consensus       235 i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~r  314 (372)
T PRK14286        235 LKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFR  314 (372)
T ss_pred             EEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEE
Confidence                    00                                      01223222222  2357999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      |+|+|++...+...|||||+|+|..|..+..++.+|+.++
T Consensus       315 i~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l  354 (372)
T PRK14286        315 LKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEEF  354 (372)
T ss_pred             ECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999755556899999999999998888887766553

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=6.2e-14  Score=137.06  Aligned_cols=119  Identities=29%  Similarity=0.497  Sum_probs=90.3

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ..+.+|+.|.|+|+++.            .+|+.|.|.|++...            
T Consensus       179 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  246 (397)
T PRK14281        179 TETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVK------------DRCPACYGEGIKQGEVTVKVTVPAGVQ  246 (397)
T ss_pred             CccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeC------------CCCCCCCCCccEecceEEEEecCCCCC
Confidence            568999999997532         13578999999998865            689999999987430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|+||+|+++|+
T Consensus       247 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~G~  326 (397)
T PRK14281        247 DGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGTQPET  326 (397)
T ss_pred             CCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeCCccCCCc
Confidence                                                              0112333333332 2347899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +++|+|+|++...++.+|||||+|+|..|..+..++..|+.++
T Consensus       327 ~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l  369 (397)
T PRK14281        327 MLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKELLKEL  369 (397)
T ss_pred             EEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence            9999999998655556899999999999998887776665553

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=8.6e-14  Score=135.76  Aligned_cols=118  Identities=25%  Similarity=0.532  Sum_probs=89.0

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     ..+.+|+.|+|+|+++.            .+|..|.|.|++...                
T Consensus       190 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  257 (392)
T PRK14279        190 PKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE------------DPCEECKGTGVTTRTRTINVRIPPGVEDGQR  257 (392)
T ss_pred             CCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC------------CcCCCCCCCeEEEEeeeeEEEeCCCCCCCcE
Confidence            467999999998632     34689999999999865            689999999977530                


Q ss_pred             ----------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCCEEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGATMQI  282 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~~i~l  282 (339)
                                                                    .=..+++...+.. ...++|+||+|+++|++|+|
T Consensus       258 i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip~g~~~g~~iri  337 (392)
T PRK14279        258 IRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILRV  337 (392)
T ss_pred             EEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEECCCCCCCCEEEE
Confidence                                                          0001233222222 23479999999999999999


Q ss_pred             ccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          283 RGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       283 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +|+|++.. ++.+|||||+|+|..|..+..++..++.++
T Consensus       338 ~g~G~p~~-~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~  375 (392)
T PRK14279        338 RGRGVPKR-SGGAGDLLVTVKVAVPPNLDGAAAEALEAY  375 (392)
T ss_pred             CCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            99999963 456899999999999998887776665553

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=9.4e-14  Score=134.55  Aligned_cols=120  Identities=29%  Similarity=0.550  Sum_probs=89.9

Q ss_pred             eeeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee---------------
Q 019562          190 CFETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID---------------  249 (339)
Q Consensus       190 ~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~---------------  249 (339)
                      ....|+.|+|+|....     ....+|+.|.|+|+++.            .+|+.|.|.|++...               
T Consensus       155 ~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~  222 (369)
T PRK14288        155 ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIK------------TPCQACKGKTYILKDEEIDAIIPEGIDDQN  222 (369)
T ss_pred             CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcc------------ccCccCCCcceEEEEEEEEEecCCCCCCCC
Confidence            3568999999997522     23569999999998765            689999999876430               


Q ss_pred             ----------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCCCEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G~~i~  281 (339)
                                                                    .=..|++...+..  ...++|.||+|+++|++++
T Consensus       223 ~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~  302 (369)
T PRK14288        223 RMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA  302 (369)
T ss_pred             EEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence                                                          0112333333332  2357999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      |+|+|++.......|||||+|+|+.|..|..++..++.++
T Consensus       303 i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~  342 (369)
T PRK14288        303 FRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKL  342 (369)
T ss_pred             EcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999654445799999999999999988776665543

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.46  E-value=1.3e-13  Score=100.62  Aligned_cols=65  Identities=48%  Similarity=0.999  Sum_probs=54.5

Q ss_pred             CCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEE-eecccccCCce
Q 019562          194 CDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII-IDHCRRCGGNG  258 (339)
Q Consensus       194 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~-~~~C~~C~g~g  258 (339)
                      |+.|+|+|........+|+.|+|+|+++..++.+++++++..+|+.|+|+|+++ .++|+.|+|.+
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence            899999999999999999999999999999888888888889999999999999 99999999864

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.46  E-value=8.5e-14  Score=134.36  Aligned_cols=118  Identities=31%  Similarity=0.633  Sum_probs=87.6

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         +.+.+|+.|.|+|+++.            .+|+.|.|.|++...            
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  227 (354)
T TIGR02349       160 PKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIK------------EPCSTCKGKGRVKERKTITVKIPAGVD  227 (354)
T ss_pred             CccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecC------------CCCCCCCCCcEecccceEEEEECCCCC
Confidence            467999999986421         23569999999998764            679999999876430            


Q ss_pred             ------------c--------------------------------------ccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 ------------H--------------------------------------CRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 ------------~--------------------------------------C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                  .                                      =..|++...+.. ...++|.||+|+++|+
T Consensus       228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~  307 (354)
T TIGR02349       228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT  307 (354)
T ss_pred             CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence                        0                                      001222222221 2357999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                      +++|+|+|++...+..+|||||+|+|..|+.+++++.+++.+
T Consensus       308 ~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l~~  349 (354)
T TIGR02349       308 VFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELLEE  349 (354)
T ss_pred             EEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            999999999876555789999999999999998888766543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.46  E-value=7.4e-14  Score=135.36  Aligned_cols=119  Identities=29%  Similarity=0.563  Sum_probs=89.0

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|.|+|+++.            .+|..|+|.|.+...            
T Consensus       155 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  222 (371)
T PRK14287        155 PETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIK------------QKCATCGGKGKVRKRKKINVKVPAGID  222 (371)
T ss_pred             CcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcccc------------ccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence            457999999997532         23578999999998765            679999998865430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|+||+|+++|+
T Consensus       223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~  302 (371)
T PRK14287        223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT  302 (371)
T ss_pred             CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence                                                              0012233333332 2347999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +++|+|+|++...++.+|||||+|+|..|+.+++++..|+.++
T Consensus       303 ~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l  345 (371)
T PRK14287        303 SFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREF  345 (371)
T ss_pred             EEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence            9999999998655556899999999999999998887776664

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.45  E-value=1.2e-13  Score=133.85  Aligned_cols=119  Identities=21%  Similarity=0.515  Sum_probs=87.7

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         +.+.+|+.|+|+|+++.            ..|+.|.|.|++...            
T Consensus       166 ~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  233 (372)
T PRK14296        166 IHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIK------------NKCKNCKGKGKYLERKKIEVNIPKGIR  233 (372)
T ss_pred             CccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeec------------ccccCCCCceEEEEEEEEEEEECCCCC
Confidence            357999999997632         23569999999998865            689999999976430            


Q ss_pred             ---------------------------------ccc------------------ccCCceEEee-ceEEEEEeCCCCCCC
Q 019562          250 ---------------------------------HCR------------------RCGGNGEVQS-KRSMKVVIPPGVSNG  277 (339)
Q Consensus       250 ---------------------------------~C~------------------~C~g~g~~~~-~~~l~v~Ip~G~~~G  277 (339)
                                                       ...                  .|++...+.+ ...++|.||+++++|
T Consensus       234 ~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~~g  313 (372)
T PRK14296        234 PNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSINSN  313 (372)
T ss_pred             CCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccCCC
Confidence                                             011                  2233333322 223699999999999


Q ss_pred             CEEEEccCCCCCC-CCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          278 ATMQIRGEGNFDR-RRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       278 ~~i~l~g~G~~~~-~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      ++++|+|+|+|.. ..+..|||||+|+|+.|..+..+...|+.++
T Consensus       314 ~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l  358 (372)
T PRK14296        314 ELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQI  358 (372)
T ss_pred             cEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999843 3345799999999999998887776665543

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.45  E-value=1.2e-13  Score=134.09  Aligned_cols=119  Identities=29%  Similarity=0.545  Sum_probs=87.1

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|+|+|+++.            .+|+.|+|.|++...            
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~i~V~Ip~G~~  227 (376)
T PRK14280        160 KETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIK------------EKCPTCHGKGKVRKRKKINVKIPAGVD  227 (376)
T ss_pred             CccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceec------------CCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence            457999999987421         23568999999998764            679999999876430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|.||+|+++|+
T Consensus       228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~  307 (376)
T PRK14280        228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT  307 (376)
T ss_pred             CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence                                                              0012233333332 2347899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +++|+|+|++...+..+|||||+|+|..|..+..+...++.++
T Consensus       308 ~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l  350 (376)
T PRK14280        308 QFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKELLREF  350 (376)
T ss_pred             EEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999998755556899999999999998887776665554

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.45  E-value=9.7e-14  Score=135.00  Aligned_cols=119  Identities=24%  Similarity=0.468  Sum_probs=85.5

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ..+.+|+.|.|+|+++.            .+|+.|.|.|++...            
T Consensus       163 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~  230 (380)
T PRK14276        163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIK------------EPCQTCHGTGHEKQAHTVSVKIPAGVE  230 (380)
T ss_pred             CccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcccc------------CCCCCCCCceEEEEEEEEEEEeCCCcc
Confidence            356888988887521         22568888888888764            678888888875430            


Q ss_pred             ------------c--------------------------------------ccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 ------------H--------------------------------------CRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 ------------~--------------------------------------C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                  .                                      =..+++...+.. ...++|.||+|+++|+
T Consensus       231 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g~  310 (380)
T PRK14276        231 TGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTGK  310 (380)
T ss_pred             CCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCCC
Confidence                        0                                      001223322222 2246899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +++|+|+|++...+..+|||||+|+|..|..+..+...++.++
T Consensus       311 ~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~  353 (380)
T PRK14276        311 KFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEALKAF  353 (380)
T ss_pred             EEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999765556899999999999998887776665554

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.44  E-value=1.6e-13  Score=118.91  Aligned_cols=64  Identities=27%  Similarity=0.444  Sum_probs=57.0

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        44 ~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~------~~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      .|||++|||++.  ++..+|+++||+|++++|||+..+.      .+.+.|..||+||++|+||.+|+.|+-
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            389999999996  7889999999999999999997532      156789999999999999999999984

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=1.5e-13  Score=133.44  Aligned_cols=120  Identities=24%  Similarity=0.521  Sum_probs=89.7

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         +...+|+.|.|+|+++.            .+|..|.|+|++...            
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~IppG~~  227 (374)
T PRK14293        160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIE------------DPCDACGGQGVKQVTKKLKINIPAGVD  227 (374)
T ss_pred             CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEec------------cCCCCCCCCcccccceEEEEEeCCCCC
Confidence            357999999997521         23578999999998765            679999999875430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..|++...+.. ...++|.||+|+++|+
T Consensus       228 ~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~  307 (374)
T PRK14293        228 TGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNT  307 (374)
T ss_pred             CCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCC
Confidence                                                              0112333333332 2246899999999999


Q ss_pred             EEEEccCCCCCCCC-CCCcCEEEEEEEecCCCccccccceeEecc
Q 019562          279 TMQIRGEGNFDRRR-SLAGDLFVALHVDEKQGIHRDGLNLFSKIS  322 (339)
Q Consensus       279 ~i~l~g~G~~~~~~-~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~  322 (339)
                      +++|+|+|++...+ +..|||||+|+|..|+.+++++.+|+.++.
T Consensus       308 ~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~  352 (374)
T PRK14293        308 VLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLA  352 (374)
T ss_pred             EEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999986543 357999999999999999999998877653

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=1.9e-13  Score=132.93  Aligned_cols=118  Identities=26%  Similarity=0.538  Sum_probs=87.3

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ..+.+|+.|+|+|.++.            .+|..|.|.|.+...            
T Consensus       165 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~i~V~Ip~G~~  232 (380)
T PRK14297        165 PKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIE------------DPCNKCHGKGKVRKNRKIKVNVPAGVD  232 (380)
T ss_pred             CccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcC------------CCCCCCCCCeEEEeEeEEEEEeCCCCC
Confidence            467999999996521         24679999999998754            689999999865320            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|.||+|+++|+
T Consensus       233 ~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~g~  312 (380)
T PRK14297        233 TGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQPGT  312 (380)
T ss_pred             CCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCCCC
Confidence                                                              0001233333322 2347899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                      +++|+|+|++...++.+|||||+|+|..|..+..+...++.+
T Consensus       313 ~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l~~  354 (380)
T PRK14297        313 VFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKEALTM  354 (380)
T ss_pred             EEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHH
Confidence            999999999865555689999999999999888777666544

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=1.6e-13  Score=133.71  Aligned_cols=119  Identities=29%  Similarity=0.582  Sum_probs=88.1

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|.|+|+++.            .+|+.|+|.|++...            
T Consensus       172 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  239 (386)
T PRK14277        172 PVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIIT------------DPCNKCGGTGRIRRRRKIKVNIPAGID  239 (386)
T ss_pred             CccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeecc------------CCCCCCCCCcEEeeeeEEEEecCCCcc
Confidence            467999999997521         22468999999998865            689999999976430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..|++...+.. ...++|.||+|+++|+
T Consensus       240 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~  319 (386)
T PRK14277        240 DGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGT  319 (386)
T ss_pred             CCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCC
Confidence                                                              0002233333322 2236899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +++|+|+|++...+...|||||+|+|..|..+..++.+++.++
T Consensus       320 ~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l  362 (386)
T PRK14277        320 KFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKELLREF  362 (386)
T ss_pred             EEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHH
Confidence            9999999998655556899999999999998887777665554

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.43  E-value=1.6e-13  Score=118.22  Aligned_cols=64  Identities=30%  Similarity=0.450  Sum_probs=56.5

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        44 ~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      .|||++|||++.  ++..+|+++||+|++++|||++.+..    +.+.+..|++||++|+||.+|+.|+.
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            589999999997  78999999999999999999986421    33568899999999999999999975

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.43  E-value=1.8e-13  Score=133.38  Aligned_cols=118  Identities=26%  Similarity=0.557  Sum_probs=89.1

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     ..+.+|+.|+|+|+++.            .+|..|.|.|++...                
T Consensus       183 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~  250 (389)
T PRK14295        183 PRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIAD------------DPCLVCKGSGRAKSSRTMQVRIPAGVSDGQR  250 (389)
T ss_pred             CcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEec------------cCCCCCCCCceEeeeeEEEEEeCCCCCCCCE
Confidence            467999999997522     24679999999998865            689999999976430                


Q ss_pred             ----------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCCCEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G~~i~  281 (339)
                                                                    .=..+++...+..  ...++|.||+|+++|++|+
T Consensus       251 i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~ir  330 (389)
T PRK14295        251 IRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLR  330 (389)
T ss_pred             EEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEE
Confidence                                                          0012233333322  2368999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      |+|+|++.. ++.+|||||+|+|..|..+..++..++.++
T Consensus       331 i~G~G~p~~-~~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l  369 (389)
T PRK14295        331 VRGKGAVRK-DGTRGDLLVTVEVAVPKDLSGKAREALEAF  369 (389)
T ss_pred             ECCCCcCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            999999863 456899999999999998887777666553

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.42  E-value=1.9e-13  Score=133.25  Aligned_cols=118  Identities=29%  Similarity=0.561  Sum_probs=88.2

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|+|+|+++.            ..|+.|+|.|.+...            
T Consensus       171 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  238 (386)
T PRK14289        171 SETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIK------------KKCKKCGGEGIVYGEEVITVKIPAGVA  238 (386)
T ss_pred             CCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccC------------cCCCCCCCCcEEeeeEEEEEEeCCCCC
Confidence            467999999998632         23578999999998754            679999999976430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|.||+|+++|+
T Consensus       239 ~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~  318 (386)
T PRK14289        239 EGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGK  318 (386)
T ss_pred             CCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCc
Confidence                                                              0012233333333 3357999999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                      +++|+|+|.+...++.+|||||+|+|+.|..+..++..|+.+
T Consensus       319 ~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~  360 (386)
T PRK14289        319 VLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQTLEK  360 (386)
T ss_pred             EEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHHHHHHH
Confidence            999999999876556789999999999998887776665544

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.42  E-value=7.2e-14  Score=124.20  Aligned_cols=70  Identities=39%  Similarity=0.695  Sum_probs=65.5

Q ss_pred             ccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcc
Q 019562           39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (339)
Q Consensus        39 ~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~  108 (339)
                      +-+...|.|++|||+++|+..||.+|||+||+++|||+++++++.+.|..|.+||++|.|.+.|..||-+
T Consensus        28 LYCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   28 LYCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             hcccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHH
Confidence            3345689999999999999999999999999999999999999999999999999999999999999964

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.41  E-value=3.5e-13  Score=132.16  Aligned_cols=120  Identities=23%  Similarity=0.450  Sum_probs=88.1

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ..+.+|+.|+|+|+++...          .+|+.|+|.|++...            
T Consensus       166 ~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~----------~~C~~C~G~g~v~~~~~l~V~Ip~G~~  235 (421)
T PTZ00037        166 FVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPES----------KKCKNCSGKGVKKTRKILEVNIDKGVP  235 (421)
T ss_pred             CccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecccc----------ccCCcCCCcceeeeeeEEEEeeCCCCC
Confidence            467999999996411         2467999999999876522          689999999976530            


Q ss_pred             -------------------------------------------------cccccCCceEEee--ceEEEEEeCCC--CCC
Q 019562          250 -------------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPG--VSN  276 (339)
Q Consensus       250 -------------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G--~~~  276 (339)
                                                                       .=..|++...+..  ...|+|+||+|  +++
T Consensus       236 dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~p  315 (421)
T PTZ00037        236 NQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKP  315 (421)
T ss_pred             CCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCC
Confidence                                                             0112344433332  23579999999  999


Q ss_pred             CCEEEEccCCCCCCCC-CCCcCEEEEEEEecC--CCccccccceeEe
Q 019562          277 GATMQIRGEGNFDRRR-SLAGDLFVALHVDEK--QGIHRDGLNLFSK  320 (339)
Q Consensus       277 G~~i~l~g~G~~~~~~-~~~GDLiv~i~v~~~--~~f~R~g~dL~~~  320 (339)
                      |++++|+|+|+|...+ ...|||||+|+|..|  ..+..+...|+.+
T Consensus       316 g~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~  362 (421)
T PTZ00037        316 GDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKS  362 (421)
T ss_pred             CcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHH
Confidence            9999999999996543 467999999999999  7777666555443

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.41  E-value=3.8e-13  Score=116.38  Aligned_cols=66  Identities=26%  Similarity=0.425  Sum_probs=58.9

Q ss_pred             cccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           42 AGTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        42 ~~~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~------~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      ...|||++|||++.  .+..+|+++||+|++++|||++....      +.+.|..||+||++|+||.+|+.|+-
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            46799999999997  67899999999999999999975322      56789999999999999999999995

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.39  E-value=4.9e-13  Score=130.06  Aligned_cols=119  Identities=27%  Similarity=0.568  Sum_probs=87.6

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|+.|+|+|....         ....+|+.|.|+|+.+.            .+|..|.|.|.+...            
T Consensus       163 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~l~V~IppG~~  230 (378)
T PRK14283        163 VKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVE------------KPCSNCHGKGVVRETKTISVKIPAGVE  230 (378)
T ss_pred             CccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecC------------CCCCCCCCceeeccceeEEEEECCCCC
Confidence            457999999998632         23578999999998754            679999999875430            


Q ss_pred             --------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCC
Q 019562          250 --------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGA  278 (339)
Q Consensus       250 --------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~  278 (339)
                                                                        .=..+++...+.. ...++|.||+|+++|+
T Consensus       231 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~  310 (378)
T PRK14283        231 TGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGT  310 (378)
T ss_pred             CCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCC
Confidence                                                              0001223322321 2357899999999999


Q ss_pred             EEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          279 TMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       279 ~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +++|+|+|++......+|||||+|+|..|+.++.++..|+.++
T Consensus       311 ~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~  353 (378)
T PRK14283        311 TFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLREF  353 (378)
T ss_pred             EEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHH
Confidence            9999999998655456899999999999988887776665543

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.38  E-value=3e-13  Score=129.39  Aligned_cols=66  Identities=41%  Similarity=0.572  Sum_probs=64.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcc
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~  108 (339)
                      .+|.|.+|||+.++++++|||.||++|...|||+|..+.|+|.|+.++.||++|+|+++|..||.-
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e  299 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLE  299 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence            689999999999999999999999999999999999999999999999999999999999999973

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=5.5e-13  Score=129.80  Aligned_cols=108  Identities=34%  Similarity=0.616  Sum_probs=80.1

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee----------------
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID----------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~----------------  249 (339)
                      ...|+.|+|+|....     ..+.+|+.|+|+|. +.            ..|+.|+|.|++...                
T Consensus       173 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  239 (382)
T PRK14291        173 EKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LR------------EPCSKCNGRGLVIKKETIKVRIPPGVDNGSK  239 (382)
T ss_pred             CccCCCCCCceEEEEecceEEEEecCCCCCCceE-Ec------------cCCCCCCCCceEEeeeEEEEEeCCCCCCCCE
Confidence            467999999997532     34679999999994 33            679999999876430                


Q ss_pred             ----------------------------------------------cccccCCceEEee--ceEEEEEeCCCCCCCCEEE
Q 019562          250 ----------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPGVSNGATMQ  281 (339)
Q Consensus       250 ----------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G~~~G~~i~  281 (339)
                                                                    .=..+++...+..  ...++|.||+|+++|++|+
T Consensus       240 i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~  319 (382)
T PRK14291        240 LRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIR  319 (382)
T ss_pred             EEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEEE
Confidence                                                          0001223333322  3457999999999999999


Q ss_pred             EccCCCCCCCCCCCcCEEEEEEEecCC--Ccc
Q 019562          282 IRGEGNFDRRRSLAGDLFVALHVDEKQ--GIH  311 (339)
Q Consensus       282 l~g~G~~~~~~~~~GDLiv~i~v~~~~--~f~  311 (339)
                      |+|+|++...+..+|||||+|+|..|.  .+.
T Consensus       320 i~G~G~p~~~~~~~GDL~V~~~V~~P~~~~ls  351 (382)
T PRK14291        320 VPGKGMPRLKGSGYGDLVVRVHIDVPKISMLS  351 (382)
T ss_pred             ECCCCCCCCCCCCCCCEEEEEEEEeCCCcCcC
Confidence            999999876555689999999999996  366

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.37  E-value=7.7e-13  Score=114.94  Aligned_cols=68  Identities=24%  Similarity=0.304  Sum_probs=58.1

Q ss_pred             ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCC-cc-----hHHHHHHHHHHHhhccCchhhhhhhc--ccc
Q 019562           43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKS-PG-----AEEKFKEISSAYEVLSDDEKRSVYDR--FGE  110 (339)
Q Consensus        43 ~~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~-~~-----~~~~f~~i~~Ay~vL~d~~~r~~yd~--~G~  110 (339)
                      ..|||++|||++.  ++..+|+++||+|++++|||+... +.     +.+.+..||+||++|+||.+|+.|+-  .|.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~   82 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGV   82 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCC
Confidence            4799999999995  689999999999999999999863 22     33456899999999999999999984  454

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=1.2e-12  Score=127.03  Aligned_cols=119  Identities=24%  Similarity=0.513  Sum_probs=86.1

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee------------
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID------------  249 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~------------  249 (339)
                      ...|..|+|+|....         ....+|..|+|.|..+.            .+|..|.|+|++...            
T Consensus       157 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~  224 (371)
T PRK14292        157 PKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIIT------------DPCTVCRGRGRTLKAETVKVKLPRGID  224 (371)
T ss_pred             CccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecC------------CCCCCCCCceEEeecceEEEEECCCCC
Confidence            467999999887532         12468999999997754            679999988866430            


Q ss_pred             ------------------------------------------------cccccCCceEEee-ceEEEEEeCCCCCCCCEE
Q 019562          250 ------------------------------------------------HCRRCGGNGEVQS-KRSMKVVIPPGVSNGATM  280 (339)
Q Consensus       250 ------------------------------------------------~C~~C~g~g~~~~-~~~l~v~Ip~G~~~G~~i  280 (339)
                                                                      .=..+++...+.. ...++|.||+|+++|+++
T Consensus       225 ~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~  304 (371)
T PRK14292        225 EGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQHGDLH  304 (371)
T ss_pred             CCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCCCcEE
Confidence                                                            0001223322221 223479999999999999


Q ss_pred             EEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEec
Q 019562          281 QIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKI  321 (339)
Q Consensus       281 ~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~  321 (339)
                      +|+|+|++...+..+|||||+|+|+.|+.++.+...|+.++
T Consensus       305 ~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~  345 (371)
T PRK14292        305 RLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREALEAY  345 (371)
T ss_pred             EECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            99999998765566899999999999999988877765544

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.34  E-value=9.9e-13  Score=105.40  Aligned_cols=52  Identities=23%  Similarity=0.410  Sum_probs=48.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcc
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS   97 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~   97 (339)
                      ..++|++|||++++|.+||+++||+|++++|||++   ++.+.|++|++||++|.
T Consensus        64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~  115 (116)
T PTZ00100         64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence            47999999999999999999999999999999985   56789999999999985

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.23  E-value=6.2e-12  Score=116.50  Aligned_cols=57  Identities=40%  Similarity=0.531  Sum_probs=51.2

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--------cchHHHHHHHHHHHhhccC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--------PGAEEKFKEISSAYEVLSD   98 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--------~~~~~~f~~i~~Ay~vL~d   98 (339)
                      ...|+|++|||++++|.+|||+|||+|+++||||++..        +.++++|++|++||++|+.
T Consensus       198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            34799999999999999999999999999999999642        2478999999999999985

>PHA02624 large T antigen; Provisional

Probab=99.19  E-value=1.1e-11  Score=124.20  Aligned_cols=60  Identities=28%  Similarity=0.506  Sum_probs=56.7

Q ss_pred             ccCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhh
Q 019562           43 GTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVY  105 (339)
Q Consensus        43 ~~d~y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~y  105 (339)
                      ..++|++|||+++|  +.+|||+|||++|++||||++   +++++|++|++||++|+|+.+|..|
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhc
Confidence            46899999999999  999999999999999999996   4578999999999999999999999

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.16  E-value=2.7e-11  Score=92.10  Aligned_cols=52  Identities=27%  Similarity=0.553  Sum_probs=40.9

Q ss_pred             eEEEEEeCCCCCCCCEEEEccCCCCCCCCC-CCcCEEEEEEEecCCCcccccc
Q 019562          264 RSMKVVIPPGVSNGATMQIRGEGNFDRRRS-LAGDLFVALHVDEKQGIHRDGL  315 (339)
Q Consensus       264 ~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~-~~GDLiv~i~v~~~~~f~R~g~  315 (339)
                      +.++|.||+|+++|++++++|+|++...+. .+|||||+|+|..|..++.++.
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk   79 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQK   79 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHH
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHh
Confidence            467899999999999999999999865555 7999999999999998876544

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.12  E-value=3.2e-11  Score=115.10  Aligned_cols=70  Identities=37%  Similarity=0.667  Sum_probs=64.1

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC------cchHHHHHHHHHHHhhccCchhhhhhhccccc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~------~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~  111 (339)
                      ...|+|+||||+.+++..|||++||+|..|+|||+-++      .+.+|.+++|++||+.|+|...|+.|-.||.-
T Consensus        96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP  171 (610)
T COG5407          96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP  171 (610)
T ss_pred             cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence            35799999999999999999999999999999999754      35789999999999999999999999999863

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.01  E-value=5.5e-10  Score=96.73  Aligned_cols=64  Identities=19%  Similarity=0.249  Sum_probs=56.5

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        44 ~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~------~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      .|||++|||++.  .+..+++++|++|.+++|||+.....      +.+.-..||+||.+|+||.+|+.|=-
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL   73 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII   73 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence            599999999997  89999999999999999999975432      45677899999999999999999953

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.95  E-value=1.1e-09  Score=93.51  Aligned_cols=52  Identities=31%  Similarity=0.450  Sum_probs=45.9

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           56 ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        56 a~~~eIk~ayr~la~~~hPd~~~~~------~~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      .+..+|+++||+|++++|||+..+.      .+.+.|..||+||++|+||.+|+.|+-
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL   60 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML   60 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            4678999999999999999986432      266889999999999999999999986

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.92  E-value=9.6e-10  Score=103.38  Aligned_cols=87  Identities=16%  Similarity=0.302  Sum_probs=73.0

Q ss_pred             CCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCC
Q 019562          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC  240 (339)
Q Consensus       161 ~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  240 (339)
                      .++|.||.+++.|||.+|+.|+++.|...                                                   
T Consensus       197 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl---------------------------------------------------  225 (291)
T PRK14299        197 RLEGDDLYATVDVPAPIAVVGGKVRVMTL---------------------------------------------------  225 (291)
T ss_pred             EEECCEEEEEEecCHHHHhCCCEEEEECC---------------------------------------------------
Confidence            34588999999999999999998776432                                                   


Q ss_pred             CCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          241 GGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       241 ~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                                            ...++|.||+++++|++++|+|+|++.. .+..|||||+|+|..|+.++.++.+++.+
T Consensus       226 ----------------------dG~~~v~ip~~~~~g~~~rl~g~G~p~~-~~~~GDL~v~~~V~~P~~l~~~~~~~l~~  282 (291)
T PRK14299        226 ----------------------DGPVEVTIPPRTQAGRKLRLKGKGWPRG-PAGRGDQYAEVRITIPTRPTPEEERLYKQ  282 (291)
T ss_pred             ----------------------CCCEEEEeCCCcCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence                                  1236899999999999999999999853 35689999999999999999998887655


Q ss_pred             c
Q 019562          321 I  321 (339)
Q Consensus       321 ~  321 (339)
                      +
T Consensus       283 l  283 (291)
T PRK14299        283 L  283 (291)
T ss_pred             H
Confidence            3

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.82  E-value=1.1e-08  Score=96.51  Aligned_cols=105  Identities=27%  Similarity=0.545  Sum_probs=79.8

Q ss_pred             eCCCCCCCCccCC----------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee-------------
Q 019562          193 TCDSCGGTGAKSS----------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID-------------  249 (339)
Q Consensus       193 ~C~~C~G~G~~~~----------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~-------------  249 (339)
                      .|..|.|+|.+..          ..+..|..|+|+|..+...          ..|+.|.|++++...             
T Consensus       145 ~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~k----------d~C~~C~G~~~v~~kkil~v~V~~g~~~  214 (337)
T KOG0712|consen  145 KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLK----------DRCKTCSGAKVVREKKILEVHVEPGMPH  214 (337)
T ss_pred             CCCCCCCCCceeEEEeccccccccceeEeccCCCcccccccc----------ccCcccccchhhhhhheeeccccCCCcc
Confidence            7999999988632          3467899999999864432          789999999876430             


Q ss_pred             ------------------------------------------------cccccCCceEEe--eceEEEEEeCCC--CCCC
Q 019562          250 ------------------------------------------------HCRRCGGNGEVQ--SKRSMKVVIPPG--VSNG  277 (339)
Q Consensus       250 ------------------------------------------------~C~~C~g~g~~~--~~~~l~v~Ip~G--~~~G  277 (339)
                                                                      .-..|.+.-...  ....+++.++||  +.+|
T Consensus       215 ~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~  294 (337)
T KOG0712|consen  215 GQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPG  294 (337)
T ss_pred             cceeeeeeeeeecCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChh
Confidence                                                            012344333332  346789999999  9999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCC
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~  308 (339)
                      ++++++|+|++..... .|||||.++|+.|+
T Consensus       295 ~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  295 DTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK  324 (337)
T ss_pred             HEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence            9999999999977655 99999999999998

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.73  E-value=1.2e-08  Score=96.73  Aligned_cols=84  Identities=23%  Similarity=0.421  Sum_probs=69.1

Q ss_pred             CCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCC
Q 019562          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (339)
Q Consensus       162 ~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (339)
                      +.|.|+.+++.|||.+|+.|+++.|...                                                    
T Consensus       206 r~g~DL~~~~~Isl~~al~G~~~~i~~~----------------------------------------------------  233 (306)
T PRK10266        206 IVGQDLEIVVPLAPWEAALGAKVTVPTL----------------------------------------------------  233 (306)
T ss_pred             EeCCceEEEEecCHHHHhCCCEEEeeCC----------------------------------------------------
Confidence            3478999999999999999998877432                                                    


Q ss_pred             CccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       242 G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                                           ...++|+||+|+.+|++++|+|+|++..  +..|||||+|+|..|+.+.-+...|+.+
T Consensus       234 ---------------------~g~v~v~ip~g~~~g~~~ri~g~G~p~~--~~~GdL~v~~~v~~P~~l~~~q~~l~~~  289 (306)
T PRK10266        234 ---------------------KESILLTIPPGSQAGQRLRVKGKGLVSK--KQTGDLYAVLKIVMPPKPDEKTAALWQQ  289 (306)
T ss_pred             ---------------------CccEEEEeCCCcCCCCEEEECCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence                                 1236899999999999999999999854  3579999999999999887766655544

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.68  E-value=4.1e-08  Score=78.34  Aligned_cols=61  Identities=36%  Similarity=0.760  Sum_probs=49.0

Q ss_pred             eeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEee
Q 019562          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQS  262 (339)
Q Consensus       190 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~  262 (339)
                      ..+.|..|+|+|..      +|+.|+|+|.+....   .+++++..+|+.|.|+|+.   .|+.|.|.+++..
T Consensus        40 ~~v~C~~C~GsG~~------~C~~C~G~G~v~~~~---~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~~  100 (111)
T PLN03165         40 NTQPCFPCSGTGAQ------VCRFCVGSGNVTVEL---GGGEKEVSKCINCDGAGSL---TCTTCQGSGIQPR  100 (111)
T ss_pred             cCCCCCCCCCCCCc------CCCCCcCcCeEEEEe---CCcEEEEEECCCCCCccee---eCCCCCCCEEEee
Confidence            35789999999983      899999999887543   2345556899999999975   4999999987654

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.66  E-value=1.9e-08  Score=86.93  Aligned_cols=63  Identities=30%  Similarity=0.489  Sum_probs=57.0

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhccCchhhhh
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSV  104 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--~~~~~~f~~i~~Ay~vL~d~~~r~~  104 (339)
                      -..|+|++|.|.++.+.++||+.||+|++..|||+|++  +.|...|.-+..||..|-|+.-|..
T Consensus        51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr  115 (250)
T KOG1150|consen   51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR  115 (250)
T ss_pred             cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            35799999999999999999999999999999999985  4688999999999999999985543

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.63  E-value=2.6e-08  Score=89.77  Aligned_cols=67  Identities=36%  Similarity=0.492  Sum_probs=59.9

Q ss_pred             ccCcccccccCC---CCCHHHHHHHHHHHHHHhCCCCCC---CcchHHHHHHHHHHHhhccCchhhhhhhccc
Q 019562           43 GTDYYSTLNVRQ---NATLQEIKTSYRKLARKYHPDINK---SPGAEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (339)
Q Consensus        43 ~~d~y~iLgv~~---~a~~~eIk~ayr~la~~~hPd~~~---~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G  109 (339)
                      ..|+|.+|||+.   .|++..|.+|.++.+.+||||+..   +.+..+.|+.|+.||+||+|+.+|..||.--
T Consensus        42 ~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d  114 (379)
T COG5269          42 KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND  114 (379)
T ss_pred             hhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence            369999999997   489999999999999999999973   4567899999999999999999999999743

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.47  E-value=1.3e-07  Score=83.48  Aligned_cols=55  Identities=25%  Similarity=0.567  Sum_probs=51.5

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHh-hccC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYE-VLSD   98 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~-vL~d   98 (339)
                      +.||.+|||..+|+.++++.||.+||+++|||...+....++|.+|.+||. ||+.
T Consensus        47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999888888999999999999 8873

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=98.25  E-value=1.5e-06  Score=88.98  Aligned_cols=71  Identities=49%  Similarity=0.871  Sum_probs=67.2

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      .|||++|||+++|+.++||+|||+||++||||+++++.+.++|++|++||++|+||.+|+.||.||..+..
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d   72 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD   72 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence            69999999999999999999999999999999998878889999999999999999999999999987653

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.23  E-value=1.2e-06  Score=91.54  Aligned_cols=56  Identities=38%  Similarity=0.542  Sum_probs=48.0

Q ss_pred             cccccCcccccccCCC----CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcc
Q 019562           40 RAAGTDYYSTLNVRQN----ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS   97 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~----a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~   97 (339)
                      ++..-+-|+||.|+-+    -..+.||++|+|||.+||||+|  |+..++|..+++|||.|+
T Consensus      1277 ~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN--PEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1277 TMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN--PEGREMFERVNKAYELLS 1336 (2235)
T ss_pred             ccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHH
Confidence            3445678999999864    2347899999999999999998  677899999999999998

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.06  E-value=4.4e-06  Score=72.86  Aligned_cols=48  Identities=27%  Similarity=0.629  Sum_probs=39.1

Q ss_pred             ecCCCCCCccEEEe--ecccccCCceEEeeceEEEEEeCCCCCCCCEEEEc
Q 019562          235 STCSKCGGDGKIII--DHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR  283 (339)
Q Consensus       235 ~~C~~C~G~G~~~~--~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~  283 (339)
                      .+|+.|+|+|+++.  ++|+.|+|.|.+..+..+.+.+ .|+.+|++|++.
T Consensus       100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            56777777777765  5788888888888889999999 999999999874

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.97  E-value=1.3e-05  Score=62.69  Aligned_cols=55  Identities=24%  Similarity=0.284  Sum_probs=46.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCch
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE  100 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~  100 (339)
                      .+.--.||||++.++.+.||+|+||+....|||+..+|   ..-.+||||+++|....
T Consensus        55 r~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~~  109 (112)
T KOG0723|consen   55 RREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGTS  109 (112)
T ss_pred             hHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhccc
Confidence            34556699999999999999999999999999997554   44558999999997543

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=97.83  E-value=8.5e-06  Score=59.32  Aligned_cols=43  Identities=33%  Similarity=0.872  Sum_probs=31.1

Q ss_pred             eeeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCcc
Q 019562          191 FETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG  244 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  244 (339)
                      ...|+.|+|+|....         ..+.+|+.|+|+|+++ ..          .+|+.|+|.|
T Consensus        15 ~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i-~~----------~~C~~C~G~g   66 (66)
T PF00684_consen   15 PKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII-EK----------DPCKTCKGSG   66 (66)
T ss_dssp             -EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE--TS----------SB-SSSTTSS
T ss_pred             CcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE-CC----------CCCCCCCCcC
Confidence            357999999999733         2368999999999987 22          7999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.76  E-value=1.8e-05  Score=78.70  Aligned_cols=69  Identities=32%  Similarity=0.742  Sum_probs=37.8

Q ss_pred             eeCCCCCCCCccCCCCcccCCCCCCccEEEEeee--------cCCcceee-eecCCCCCCccEEE-eecccccCCceEEe
Q 019562          192 ETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR--------TPFGLISQ-VSTCSKCGGDGKII-IDHCRRCGGNGEVQ  261 (339)
Q Consensus       192 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~--------~~~g~~~~-~~~C~~C~G~G~~~-~~~C~~C~g~g~~~  261 (339)
                      ..|+.|+|+|.... ....|+.|+|+|+.-....        ..+-++.. ..+|+.|.|+|++. .+.|..|.|+|.+.
T Consensus         3 ~~C~~C~g~G~i~v-~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~~~c~~c~G~gkv~   81 (715)
T COG1107           3 KKCPECGGKGKIVV-GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVYDTCPECGGTGKVL   81 (715)
T ss_pred             ccccccCCCceEee-eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEEeecccCCCceeEE
Confidence            35777777766542 2456777777776521111        00111111 24677777777764 46677777766554

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.26  E-value=0.00027  Score=59.20  Aligned_cols=72  Identities=22%  Similarity=0.401  Sum_probs=56.5

Q ss_pred             cccccCcccccccCC--CCCHHHHHHHHHHHHHHhCCCCCCC------cchHHHHHHHHHHHhhccCchhhhhhhc--cc
Q 019562           40 RAAGTDYYSTLNVRQ--NATLQEIKTSYRKLARKYHPDINKS------PGAEEKFKEISSAYEVLSDDEKRSVYDR--FG  109 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~--~a~~~eIk~ayr~la~~~hPd~~~~------~~~~~~f~~i~~Ay~vL~d~~~r~~yd~--~G  109 (339)
                      +....+||.++|...  ...+..++.-|....+++|||+...      ..+.+...++++||.+|.||.+|+.|=.  +|
T Consensus         4 ~~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~g   83 (168)
T KOG3192|consen    4 MGSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLKG   83 (168)
T ss_pred             cchHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhC
Confidence            445679999997554  4566667779999999999998532      2477889999999999999999999953  55


Q ss_pred             cc
Q 019562          110 EA  111 (339)
Q Consensus       110 ~~  111 (339)
                      .+
T Consensus        84 ~e   85 (168)
T KOG3192|consen   84 QE   85 (168)
T ss_pred             CC
Confidence            43

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=96.92  E-value=0.00062  Score=54.50  Aligned_cols=41  Identities=32%  Similarity=0.748  Sum_probs=32.4

Q ss_pred             eCCCCCCCCccCC------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe
Q 019562          193 TCDSCGGTGAKSS------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (339)
Q Consensus       193 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~  248 (339)
                      .|+.|+|+|....      ..+..|+.|+|+|+.               .|+.|.|+|.+.+
T Consensus        54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---------------~C~~C~G~G~~~~  100 (111)
T PLN03165         54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---------------TCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---------------eCCCCCCCEEEee
Confidence            7999999998632      226799999999962               4999999998753

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=96.82  E-value=0.0013  Score=65.90  Aligned_cols=47  Identities=38%  Similarity=0.802  Sum_probs=36.2

Q ss_pred             eeeCCCCCCCCccCCCC------------------cccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe
Q 019562          191 FETCDSCGGTGAKSSNC------------------IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~~~------------------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~  248 (339)
                      ...|+-|+|+|......                  ..+|+.|.|+|.+...           .+|+.|+|+|++..
T Consensus        18 ~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v~-----------~~c~~c~G~gkv~~   82 (715)
T COG1107          18 EEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTVY-----------DTCPECGGTGKVLT   82 (715)
T ss_pred             eeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEEE-----------eecccCCCceeEEe
Confidence            46799999999863211                  3589999999987542           68999999998764

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=96.59  E-value=0.0015  Score=57.07  Aligned_cols=29  Identities=31%  Similarity=0.822  Sum_probs=16.0

Q ss_pred             ccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEE
Q 019562          209 QSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII  247 (339)
Q Consensus       209 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  247 (339)
                      .+|+.|+|+|+++...          .+|+.|+|+|++.
T Consensus       100 ~~C~~C~G~G~~i~~~----------~~C~~C~G~G~v~  128 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQ----------RECDTCAGTGRFR  128 (186)
T ss_pred             CcCCCCCCeeEEecCC----------CCCCCCCCccEEe
Confidence            4555566666554421          3566666666654

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=96.38  E-value=0.0038  Score=58.11  Aligned_cols=33  Identities=30%  Similarity=0.749  Sum_probs=23.1

Q ss_pred             ecCCCCCCccEEEeecccccCCceEEeeceEEEEEe
Q 019562          235 STCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVI  270 (339)
Q Consensus       235 ~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~I  270 (339)
                      ..|+.|.|+|.   .+|.+|.|+|.+.....+.|..
T Consensus       246 ~~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~w  278 (406)
T KOG2813|consen  246 KECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVYW  278 (406)
T ss_pred             ccCCcccCCCC---cccccccCccceeeeEEEEEEe
Confidence            35777777764   4799999988777766665554

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.87  E-value=0.0044  Score=53.89  Aligned_cols=53  Identities=38%  Similarity=0.532  Sum_probs=46.1

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--------cchHHHHHHHHHHHhhc
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--------PGAEEKFKEISSAYEVL   96 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--------~~~~~~f~~i~~Ay~vL   96 (339)
                      .+.|++|++...+...+|+++|+++....|||+-..        ..+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999997431        24778899999999853

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.37  E-value=0.0095  Score=51.80  Aligned_cols=63  Identities=30%  Similarity=0.455  Sum_probs=49.4

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        45 d~y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~------~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      |++.++++.+.+  ..+.++..|+.+++.+|||+.....      +.+.+..++.||.+|.+|.+|+.|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            456666666654  4455888999999999999975332      44678999999999999999998854

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=94.82  E-value=0.015  Score=54.31  Aligned_cols=24  Identities=33%  Similarity=0.893  Sum_probs=18.1

Q ss_pred             ecCCCCCCccEEEeecccccCCceEEe
Q 019562          235 STCSKCGGDGKIIIDHCRRCGGNGEVQ  261 (339)
Q Consensus       235 ~~C~~C~G~G~~~~~~C~~C~g~g~~~  261 (339)
                      ..|..|+|+|+   ..|.+|.|+|...
T Consensus       235 ~~C~~C~G~G~---~~C~tC~grG~k~  258 (406)
T KOG2813|consen  235 DLCYMCHGRGI---KECHTCKGRGKKP  258 (406)
T ss_pred             chhhhccCCCc---ccCCcccCCCCcc
Confidence            67888888885   4788888877543

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=93.58  E-value=0.087  Score=52.63  Aligned_cols=44  Identities=32%  Similarity=0.471  Sum_probs=32.0

Q ss_pred             cCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--------hHHHHHHHHHHHhh
Q 019562           52 VRQNATLQEIKTSYRKLARKYHPDINKSPG--------AEEKFKEISSAYEV   95 (339)
Q Consensus        52 v~~~a~~~eIk~ayr~la~~~hPd~~~~~~--------~~~~f~~i~~Ay~v   95 (339)
                      +..=.+.+.|||||||..+..||||-+..+        +++.|-.+++||..
T Consensus       396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            444468999999999999999999976432        44455555555553

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=93.57  E-value=0.14  Score=42.14  Aligned_cols=56  Identities=23%  Similarity=0.285  Sum_probs=41.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchh
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEK  101 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~  101 (339)
                      -..-..||+|++..+.++|.+.|.+|-...+|++.   ++...=.+|..|.|.|..+.+
T Consensus        57 l~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG---GSfYLQSKV~rAKErl~~El~  112 (127)
T PF03656_consen   57 LDEARQILNVKEELSREEIQKRYKHLFKANDPSKG---GSFYLQSKVFRAKERLEQELK  112 (127)
T ss_dssp             HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCT---S-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcC---CCHHHHHHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999875   556666688999998875554

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=86.50  E-value=1  Score=42.44  Aligned_cols=51  Identities=35%  Similarity=0.771  Sum_probs=37.1

Q ss_pred             EEEEeeeeeCCCCCCCCccC-----CCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEE
Q 019562          185 GIEVSCFETCDSCGGTGAKS-----SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII  247 (339)
Q Consensus       185 ~v~~~~~~~C~~C~G~G~~~-----~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  247 (339)
                      .........|..|.|.|...     .....+|..|.|.|.+..            ..|..|.|.|.+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~------------~~c~~~~g~~~v~  230 (288)
T KOG0715|consen  175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR------------DNCQACSGAGQVR  230 (288)
T ss_pred             cccccccccchhhhCcccccccccCCcceeecccccccceecc------------chHHHhhcchhhh
Confidence            33445578999999999321     112237999999998865            4599999999554

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=86.50  E-value=1.3  Score=39.19  Aligned_cols=38  Identities=26%  Similarity=0.518  Sum_probs=30.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhcc
Q 019562           53 RQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLS   97 (339)
Q Consensus        53 ~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~   97 (339)
                      +++|+.|||.+|++++..+|--|       ++.-.+|..||+.+.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd-------~~~~~~IEaAYD~IL   38 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD-------EKSREAIEAAYDAIL   38 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHH
Confidence            57899999999999999998443       345568999999654

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>TIGR00310 ZPR1_znf ZPR1 zinc finger domain

Probab=83.39  E-value=5.3  Score=35.30  Aligned_cols=75  Identities=25%  Similarity=0.449  Sum_probs=40.2

Q ss_pred             cCCCCCCccEE-EEeee-cC-Cccee-eeecCCCCCCccEEEee------c-------ccccCCceEEee------ceEE
Q 019562          210 SCKACWGRGGV-LKTQR-TP-FGLIS-QVSTCSKCGGDGKIIID------H-------CRRCGGNGEVQS------KRSM  266 (339)
Q Consensus       210 ~C~~C~G~G~~-~~~~~-~~-~g~~~-~~~~C~~C~G~G~~~~~------~-------C~~C~g~g~~~~------~~~l  266 (339)
                      .|+.|++.|.. +.... +| |+-+. ....|+.|+-+-.-+..      .       ...=-.+-+++.      --.|
T Consensus         2 ~Cp~C~~~~~~~~~~~~~IP~F~evii~sf~C~~CGyr~~ev~~~g~~~p~r~~l~V~~~~DL~r~VvkS~tati~IPEl   81 (192)
T TIGR00310         2 DCPSCGGECETVMKTVNDIPYFGEVLETSTICEHCGYRSNDVKTLGAKEPKRYILKIDDEADLNRRVVKSESATIRIPEL   81 (192)
T ss_pred             cCCCCCCCCEEEEEEEcCCCCcceEEEEEEECCCCCCccceeEECCCCCCEEEEEEECChhcccceEEEcCCcEEEccce
Confidence            47777777753 33334 44 44333 34689999876443320      0       000011111111      1246


Q ss_pred             EEEeCCC-CCCCCEEEEcc
Q 019562          267 KVVIPPG-VSNGATMQIRG  284 (339)
Q Consensus       267 ~v~Ip~G-~~~G~~i~l~g  284 (339)
                      .++|||| +..|..-++.|
T Consensus        82 ~lei~pg~~~~G~iTTVEG  100 (192)
T TIGR00310        82 GLDIEPGPTSGGFITNLEG  100 (192)
T ss_pred             EEEECCCccCCceEEeeHh
Confidence            8899999 68888888855

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=82.94  E-value=1.4  Score=37.30  Aligned_cols=46  Identities=28%  Similarity=0.643  Sum_probs=29.2

Q ss_pred             eeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccE
Q 019562          191 FETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGK  245 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~  245 (339)
                      ...|..|.|.+.      .+|..|+|+=+++.......+.   ...|+.|+=.|-
T Consensus        99 ~~~C~~Cgg~rf------v~C~~C~Gs~k~~~~~~~~~~~---~~rC~~Cnengl  144 (147)
T cd03031          99 GGVCEGCGGARF------VPCSECNGSCKVFAENATAAGG---FLRCPECNENGL  144 (147)
T ss_pred             CCCCCCCCCcCe------EECCCCCCcceEEeccCccccc---EEECCCCCcccc
Confidence            346899988765      5799999998886543111111   156777775553

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>PRK14714 DNA polymerase II large subunit; Provisional

Probab=82.66  E-value=0.94  Score=49.96  Aligned_cols=67  Identities=27%  Similarity=0.475  Sum_probs=42.3

Q ss_pred             cccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEE---EeecccccCC
Q 019562          180 FGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKI---IIDHCRRCGG  256 (339)
Q Consensus       180 ~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~---~~~~C~~C~g  256 (339)
                      .++...+.+. ...|+.|+....     ...|+.|+.+-..             ...|+.|+..=..   ....|+.|+.
T Consensus       657 ~~G~ieVEV~-~rkCPkCG~~t~-----~~fCP~CGs~te~-------------vy~CPsCGaev~~des~a~~CP~CGt  717 (1337)
T PRK14714        657 EGGVIEVEVG-RRRCPSCGTETY-----ENRCPDCGTHTEP-------------VYVCPDCGAEVPPDESGRVECPRCDV  717 (1337)
T ss_pred             cCCeEEEEEE-EEECCCCCCccc-----cccCcccCCcCCC-------------ceeCccCCCccCCCccccccCCCCCC
Confidence            4555556654 679999976532     3499999886421             1479999874110   1348999987


Q ss_pred             ceEEeeceE
Q 019562          257 NGEVQSKRS  265 (339)
Q Consensus       257 ~g~~~~~~~  265 (339)
                      .......++
T Consensus       718 plv~~~~~~  726 (1337)
T PRK14714        718 ELTPYQRRT  726 (1337)
T ss_pred             cccccceEE
Confidence            665444433

>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1

Probab=82.12  E-value=6.4  Score=33.70  Aligned_cols=20  Identities=30%  Similarity=0.649  Sum_probs=15.2

Q ss_pred             EEEEEeCCCCCCCCEEEEcc
Q 019562          265 SMKVVIPPGVSNGATMQIRG  284 (339)
Q Consensus       265 ~l~v~Ip~G~~~G~~i~l~g  284 (339)
                      .+.++||||...|..-++.|
T Consensus        81 El~~ei~pg~~~g~itTVEG  100 (160)
T smart00709       81 ELDLEIPPGPLGGFITTVEG  100 (160)
T ss_pred             eeeEEecCCCCCcEEEehHH
Confidence            46788888887787777755

Also present in archaeal proteins.

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=81.78  E-value=1.7  Score=40.24  Aligned_cols=46  Identities=30%  Similarity=0.675  Sum_probs=30.2

Q ss_pred             eeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEE
Q 019562          192 ETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII  247 (339)
Q Consensus       192 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  247 (339)
                      ..|..|.|.+.      .+|..|+|+-+++... ...+.   ..+|..|+=.|-+.
T Consensus       230 ~~C~~CGg~rF------lpC~~C~GS~kv~~~~-~~~~~---~~rC~~CNENGLvr  275 (281)
T KOG2824|consen  230 GVCESCGGARF------LPCSNCHGSCKVHEEE-EDDGG---VLRCLECNENGLVR  275 (281)
T ss_pred             CcCCCcCCcce------EecCCCCCceeeeeec-cCCCc---EEECcccCCCCcee
Confidence            56888877765      4688888888876531 11111   25788888888664

>COG5552 Uncharacterized conserved protein [Function unknown]

Probab=80.41  E-value=5.9  Score=29.15  Aligned_cols=47  Identities=19%  Similarity=0.220  Sum_probs=34.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHH
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEI   89 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i   89 (339)
                      ++|.-+++++++.|+..||+.|-++..+|..=-..++....+.|..-
T Consensus         2 CRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe~A   48 (88)
T COG5552           2 CRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFEAA   48 (88)
T ss_pred             ccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHHHH
Confidence            46777889999999999999998888888754444444445555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		3e-20
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		5e-17
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		9e-17
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		1e-15
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		3e-15
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		4e-15
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		5e-15
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		1e-14
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		1e-14
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		2e-14
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		2e-14
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-14
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		6e-14
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		7e-14
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		7e-14
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		5e-13
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		7e-13
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		3e-11
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		5e-11
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		1e-08
1exk_A	79	Solution Structure Of The Cysteine-Rich Domain Of T		4e-08
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		5e-08
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-07
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-07
2ctt_A	104	Solution Structure Of Zinc Finger Domain From Human		2e-06
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		7e-05
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		2e-04
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		2e-04
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		3e-04
2ys8_A	90	Solution Structure Of The Dnaj-Like Domain From Hum		4e-04

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/73 (58%), Positives = 56/73 (76%)
Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           G DYY TL + + A+ +EIK +YR+ A +YHPD NK PGAEEKFKEI+ AY+VLSD  KR
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61
Query: 103 SVYDRFGEAGITG 115
            ++DR+GE G+ G
Sbjct: 62  EIFDRYGEEGLKG 74

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ + V+    L+ IKT+YR+LARKYHPD++K P AE +FKE++ A+EVLSD+++R+ 
Sbjct: 6   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAE 65
Query: 105 YDR 107
           YD+
Sbjct: 66  YDQ 68

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Query: 37  GMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           GM++   T YY  L V+ NAT +E+K +YRKLA KYHPD  K+P   EKFK+IS AYEVL
Sbjct: 1   GMVKE--TTYYDVLGVKPNATQEELKKAYRKLALKYHPD--KNPNEGEKFKQISQAYEVL 56
Query: 97  SDDEKRSVYDRFGE 110
           SD +KR +YD+ GE
Sbjct: 57  SDAKKRELYDKGGE 70

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 54/77 (70%)
Query: 39  IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSD 98
           + A   D Y  L V + A+  +IK +Y+KLAR++HPD NK PGAE++F +IS AYE+LS+
Sbjct: 12  LSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSN 71
Query: 99  DEKRSVYDRFGEAGITG 115
           +EKR+ YD +G    +G
Sbjct: 72  EEKRTNYDHYGSGPSSG 88

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ L V+    L+ IKT+YR+LARKYHPD++K   AE KFK+++ A+EVL D+++R+ 
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88
Query: 105 YDRFGE 110
           YD+  +
Sbjct: 89  YDQLWQ 94

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 49/71 (69%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY  L V + A+ +++K +YR+LA K+HPD N +PGA E FK I +AY VLS+ EKR  
Sbjct: 8   DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQ 67
Query: 105 YDRFGEAGITG 115
           YD+FG    +G
Sbjct: 68  YDQFGSGPSSG 78

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V +NA+ +EIK +Y +LA+KYHPD NK  P A+EKF +++ AYEVLSD+ KR 
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 104 VYDRFGEAGITG 115
            YD +G    +G
Sbjct: 68  QYDAYGSGPSSG 79

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 47/69 (68%)
Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVY 105
           YY  L V ++A+ ++IK ++ KLA KYHPD NKSP AE KF+EI+ AYE LSD  +R  Y
Sbjct: 9   YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 106 DRFGEAGIT 114
           D  G +  T
Sbjct: 69  DTLGHSAFT 77

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 46  YYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEKRS 103
           YY  L+V ++A+  +IK +YR+ A ++HPD N      AE+KFKE++ AYEVLSD  KR 
Sbjct: 4   YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 104 VYDRFGEAGITGEYDGLSNTSQG 126
           +YDR+G  G+TG   G S    G
Sbjct: 64  IYDRYGREGLTGTGTGPSRAEAG 86

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           T YY  L V+ +A+  E+K +YRK+A K+HPD  K+P   E+FK+IS AYEVLSD++KR 
Sbjct: 8   TGYYDVLGVKPDASDNELKKAYRKMALKFHPD--KNPDGAEQFKQISQAYEVLSDEKKRQ 65
Query: 104 VYDRFGE 110
           +YD+ GE
Sbjct: 66  IYDQGGE 72

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 35  RRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAY 93
           R+  +  +G   Y  L + +NAT  +IK SYRKLA KYHPD N  +P A +KFKEI++A+
Sbjct: 8   RQRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAH 67
Query: 94  EVLSDDEKRSVYDRFGEAGI 113
            +L+D  KR++YD++G  G+
Sbjct: 68  AILTDATKRNIYDKYGSLGL 87

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 101 KRSVYDRFGEAG 112
           KR+ YD++G A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 101 KRSVYDRFGEAG 112
           KR+ YD++G A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-AEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 101 KRSVYDRFGEAG 112
           KR+ YD++G A 
Sbjct: 61  KRAAYDQYGHAA 72

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEK 101
            DYY  L+V + A+ + IK +YRKLA K+HPD N      AE +FK+++ AYEVLSD +K
Sbjct: 9   VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68
Query: 102 RSVYDRFGEAGITG 115
           R +YDR+G    +G
Sbjct: 69  RDIYDRYGSGPSSG 82

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN--KSPGAEEKFKEISSAYEVLSDDEK 101
            +YY  L V+ +A+ ++IK +YRKLA ++HPD N      AE+KFK +S AYEVLSD +K
Sbjct: 9   ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68
Query: 102 RSVYDRFG 109
           RS+YDR G
Sbjct: 69  RSLYDRAG 76

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRS 103
           T  Y  L V  +A  QE+K  YRK A KYHPD  K  G  EKFKEIS A+E+L+D +KR 
Sbjct: 8   TKLYDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQKRE 65
Query: 104 VYDRFG 109
           +YD++G
Sbjct: 66  IYDQYG 71

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL D++ R 
Sbjct: 22  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 81
Query: 104 VYDRFGEAGIT----GEYDGLS 121
            YD++GE G+     G+Y+  S
Sbjct: 82  KYDKYGEKGLEDNQGGQYESWS 103

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 5/82 (6%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL D++ R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62
Query: 104 VYDRFGEAGIT----GEYDGLS 121
            YD++GE G+     G+Y+  S
Sbjct: 63  KYDKYGEKGLEDNQGGQYESWS 84

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 4/168 (2%)
Query: 166 DIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQR 225
           DI++++  S EE   G    + ++    C  C G G K    ++ C +C G+G    T++
Sbjct: 13  DIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKG-AVKKCTSCNGQGIKFVTRQ 71
Query: 226 TPFGLISQVSTCSKCGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIR 283
               +    + C  C G G II   D C+ C G      ++ ++V + PG+ +G  +  +
Sbjct: 72  MGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFK 131
Query: 284 GEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILG 331
           GE +      + GD+   +     +   RDG +L  +  +D   AI G
Sbjct: 132 GEAD-QAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAG 178

>pdb|1EXK|A Chain A, Solution Structure Of The Cysteine-Rich Domain Of The Escherichia Coli Chaperone Protein Dnaj Length = 79

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 186 IEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGK 245
           I +   E CD C G+GAK     Q+C  C G G V   Q    G  +   TC  C G G 
Sbjct: 6   IRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGT 61
Query: 246 IIIDHCRRCGGNGEVQ 261
           +I D C +C G+G V+
Sbjct: 62  LIKDPCNKCHGHGRVE 77

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 47  YSTLNV-RQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEK 101
           Y  L V R+    Q++  +YR LARK+HPD  K+      AEE+F+ I++AYE L DDE 
Sbjct: 18  YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 102 RSVYDRF 108
           ++ YD +
Sbjct: 78  KTNYDYY 84

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 35  RRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPD----INKSPGAEEKFKEIS 90
           +R + ++   DYY  L V++NA  QEI  +YRKLA ++HPD      +   AE+KF +I+
Sbjct: 373 QRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIA 432
Query: 91  SAYEVLSDDEKRSVYD 106
           +A EVLSD E R  +D
Sbjct: 433 AAKEVLSDPEMRKKFD 448

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 35  RRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPD----INKSPGAEEKFKEIS 90
           +R + ++   DYY  L V++NA  QEI  +YRKLA ++HPD      +   AE+KF +I+
Sbjct: 373 QRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIA 432
Query: 91  SAYEVLSDDEKRSVYD 106
           +A EVLSD E R  +D
Sbjct: 433 AAKEVLSDPEXRKKFD 448

>pdb|2CTT|A Chain A, Solution Structure Of Zinc Finger Domain From Human Dnaj Subfamily A Menber 3 Length = 104

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 171 LHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRT-PFG 229
           + L+F ++  G  +   V+  +TC+ C G G +    +Q C  C G G  ++T  T PF 
Sbjct: 8   MELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSG--METINTGPFV 65
Query: 230 LISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKR 264
           +    STC +CGG G III  C  C G G+ + K+
Sbjct: 66  M---RSTCRRCGGRGSIIISPCVVCRGAGQAKQKK 97

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 44  TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKR 102
           T  Y  L V   AT  +IK +Y +    YHPD N  S  A E+F  IS AY VL     R
Sbjct: 17  TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR 76
Query: 103 SVYDR 107
             YDR
Sbjct: 77  RKYDR 81

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAE--- 83
           G++ S    + +    D+YS L    +A + ++K  Y+KL   YHPD   +  P      
Sbjct: 1   GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEE 60
Query: 84  --EKFKEISSAYEVLSDDEKRSVYD 106
             +KF EI  A+++L ++E +  YD
Sbjct: 61  CMQKFIEIDQAWKILGNEETKKKYD 85

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAE-----EKFKEISSAYEVLS 97
           D+YS L    +A + ++K  Y+KL   YHPD   +  P        +KF EI  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 98  DDEKRSVYD 106
           ++E +  YD
Sbjct: 71  NEETKREYD 79

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY+ L   + +++++I   ++  A + HPD + ++P A E F+++  A E+L+++E R+
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80
Query: 104 VYDRFGEAGIT---GEYDGLSNTSQGVDP 129
            YD +  + ++    +++ L+++ +   P
Sbjct: 81  RYDHWRRSQMSMPFQQWEALNDSVKTSGP 109

>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras- Associated Protein Rap1 Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 45 DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
          D +  L V+  A+  E+  +YRKLA   HPD   +PG+E+ FK + +A   L
Sbjct: 28 DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTAL 79

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	6e-64
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	6e-44
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-43
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	4e-42
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	9e-41
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	3e-37
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	4e-37
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	1e-36
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	2e-36
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	2e-36
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	3e-36
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	7e-36
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-35
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	5e-35
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	9e-35
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	1e-34
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	3e-34
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	2e-33
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-33
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-32
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	2e-30
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	4e-30
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	1e-29
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	2e-29
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-28
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	1e-27
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	5e-22
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	1e-19
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	4e-18
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	6e-17
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	1e-16
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	5e-16
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-15
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	4e-14
2guz_A	71	Mitochondrial import inner membrane translocase su	7e-12
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	1e-11
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	6e-11
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	1e-10
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	3e-08
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  204 bits (522), Expect = 6e-64
 Identities = 64/292 (21%), Positives = 109/292 (37%), Gaps = 67/292 (22%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           DYY+ L V+    L+ IKT+YR+LARKYHPD++K   AE KFK+++ A+EVL D+++R+ 
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAE 88

Query: 105 YDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFG 164
           YD+  +      +     T +     + +   F     +FG                  G
Sbjct: 89  YDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFS---SMFGQQAHQRR-----RQHAARG 140

Query: 165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ 224
            D+  ++ +  EE++    R I  +                         +G       +
Sbjct: 141 HDLEIEVAVFLEETLAEQTRTISYN-------------------LPVYNVFGMIESETPK 181

Query: 225 RTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRG 284
                                                    + V IP GV +G  ++++G
Sbjct: 182 T----------------------------------------LNVKIPAGVVDGQRIRLKG 201

Query: 285 EGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           +G         GDL++ +H+         G NL   + +   EA LG  + V
Sbjct: 202 QGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTV 253

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  150 bits (381), Expect = 6e-44
 Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 4/175 (2%)

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G DI++++  S EE   G    + ++    C  C G G K    ++ C +C G+G    T
Sbjct: 11  GKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKK-GAVKKCTSCNGQGIKFVT 69

Query: 224 QRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQ 281
           ++    +    + C  C G G II   D C+ C G      ++ ++V + PG+ +G  + 
Sbjct: 70  RQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIV 129

Query: 282 IRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
            +GE +      + GD+   +     +   RDG +L  +  +D   AI G    +
Sbjct: 130 FKGEAD-QAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFAL 183

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  143 bits (362), Expect = 3e-43
 Identities = 38/87 (43%), Positives = 56/87 (64%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKE 88
            +  S     + A   D Y  L V + A+  +IK +Y+KLAR++HPD NK PGAE++F +
Sbjct: 2   SSGSSGILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQ 61

Query: 89  ISSAYEVLSDDEKRSVYDRFGEAGITG 115
           IS AYE+LS++EKR+ YD +G    +G
Sbjct: 62  ISKAYEILSNEEKRTNYDHYGSGPSSG 88

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  140 bits (354), Expect = 4e-42
 Identities = 43/73 (58%), Positives = 56/73 (76%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           G DYY TL + + A+ +EIK +YR+ A +YHPD NK PGAEEKFKEI+ AY+VLSD  KR
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61

Query: 103 SVYDRFGEAGITG 115
            ++DR+GE G+ G
Sbjct: 62  EIFDRYGEEGLKG 74

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  136 bits (345), Expect = 9e-41
 Identities = 36/75 (48%), Positives = 50/75 (66%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
            +  DYY  L V + A+ +++K +YR+LA K+HPD N +PGA E FK I +AY VLS+ E
Sbjct: 4   GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPE 63

Query: 101 KRSVYDRFGEAGITG 115
           KR  YD+FG    +G
Sbjct: 64  KRKQYDQFGSGPSSG 78

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  131 bits (332), Expect = 3e-37
 Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 18/176 (10%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL D++ R 
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRK 62

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNF 163
            YD++GE G+     G        + +  Y   FG  D     +           N G  
Sbjct: 63  KYDKYGEKGLEDNQGG------QYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGEL 116

Query: 164 GLDIRY--------DLHLSFEESI--FGGQRGI-EVSCFETCDSCGGTGAKSSNCI 208
                Y        DL  ++ E      G   I  V+C +    C   G  S   +
Sbjct: 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSL 172

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  126 bits (320), Expect = 4e-37
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 2/70 (2%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
              T YY  L V+ +A+  E+K +YRK+A K+HPD N  P   E+FK+IS AYEVLSD++
Sbjct: 5   VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PDGAEQFKQISQAYEVLSDEK 62

Query: 101 KRSVYDRFGE 110
           KR +YD+ GE
Sbjct: 63  KRQIYDQGGE 72

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  125 bits (317), Expect = 1e-36
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDD 99
            +  DYY  L V +NA+ +EIK +Y +LA+KYHPD NK  P A+EKF +++ AYEVLSD+
Sbjct: 4   GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDE 63

Query: 100 EKRSVYDRFGEAGITG 115
            KR  YD +G    +G
Sbjct: 64  VKRKQYDAYGSGPSSG 79

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  125 bits (317), Expect = 2e-36
 Identities = 36/75 (48%), Positives = 47/75 (62%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
            YY  L V ++A+ ++IK ++ KLA KYHPD NKSP AE KF+EI+ AYE LSD  +R  
Sbjct: 8   SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKE 67

Query: 105 YDRFGEAGITGEYDG 119
           YD  G +  T     
Sbjct: 68  YDTLGHSAFTSGKGQ 82

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  125 bits (316), Expect = 2e-36
 Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 2/73 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEKR 102
           DYY  L+V + A+ + IK +YRKLA K+HPD N      AE +FK+++ AYEVLSD +KR
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKR 69

Query: 103 SVYDRFGEAGITG 115
            +YDR+G    +G
Sbjct: 70  DIYDRYGSGPSSG 82

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  125 bits (317), Expect = 3e-36
 Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 3/89 (3%)

Query: 28  SGNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKF 86
           SG++   R      +G   Y  L + +NAT  +IK SYRKLA KYHPD N  +P A +KF
Sbjct: 3   SGSSGRQRSLS--TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKF 60

Query: 87  KEISSAYEVLSDDEKRSVYDRFGEAGITG 115
           KEI++A+ +L+D  KR++YD++G  G+  
Sbjct: 61  KEINNAHAILTDATKRNIYDKYGSLGLYV 89

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  124 bits (314), Expect = 7e-36
 Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKR 102
            YY  L+V ++A+  +IK +YR+ A ++HPD N      AE+KFKE++ AYEVLSD  KR
Sbjct: 3   SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62

Query: 103 SVYDRFGEAGITGEYDGLSNTSQG 126
            +YDR+G  G+TG   G S    G
Sbjct: 63  EIYDRYGREGLTGTGTGPSRAEAG 86

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  124 bits (312), Expect = 1e-35
 Identities = 21/87 (24%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY+ L   + +++++I   ++  A + HPD +  +P A E F+++  A E+L+++E R+
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRA 80

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPF 130
            YD +  + ++  +      +  V   
Sbjct: 81  RYDHWRRSQMSMPFQQWEALNDSVKTS 107

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  122 bits (307), Expect = 5e-35
 Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 41  AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDE 100
              T  Y  L V  +A  QE+K  YRK A KYHPD  K  G  EKFKEIS A+E+L+D +
Sbjct: 5   VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQ 62

Query: 101 KRSVYDRFGEAGITG 115
           KR +YD++G      
Sbjct: 63  KREIYDQYGLEAARS 77

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  121 bits (306), Expect = 9e-35
 Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK--SPGAEEKFKEISSAYEVLSDDEKR 102
           +YY  L V+ +A+ ++IK +YRKLA ++HPD N      AE+KFK +S AYEVLSD +KR
Sbjct: 10  NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69

Query: 103 SVYDRFGEAGITG 115
           S+YDR G      
Sbjct: 70  SLYDRAGCDSWRA 82

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  121 bits (306), Expect = 1e-34
 Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 32  RSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEIS 90
            S  +G    + T  Y  L V   AT  +IK +Y +    YHPD N  S  A E+F  IS
Sbjct: 5   SSGSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRIS 64

Query: 91  SAYEVLSDDEKRSVYDRFGEAGITGEYDG 119
            AY VL     R  YDR   +       G
Sbjct: 65  QAYVVLGSATLRRKYDRGLLSDEDLRGPG 93

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  120 bits (302), Expect = 3e-34
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 7/94 (7%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-------SPG 81
           G++ S    + +    D+YS L    +A + ++K  Y+KL   YHPD             
Sbjct: 1   GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEE 60

Query: 82  AEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG 115
             +KF EI  A+++L ++E +  YD       +G
Sbjct: 61  CMQKFIEIDQAWKILGNEETKKKYDLQRSGPSSG 94

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  117 bits (296), Expect = 2e-33
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV 104
           D +  L V+  A+  E+  +YRKLA   HPD   +PG+E+ FK + +A   L  + K   
Sbjct: 28  DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87

Query: 105 YD 106
             
Sbjct: 88  SS 89

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  118 bits (297), Expect = 2e-33
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)

Query: 45  DYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKSP----GAEEKFKEISSAYEVLSDD 99
           + Y  L V +     Q++  +YR LARK+HPD  K+      AEE+F+ I++AYE L DD
Sbjct: 16  NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD 75

Query: 100 EKRSVYDRFGEAG 112
           E ++ YD + +  
Sbjct: 76  EAKTNYDYYLDHP 88

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  116 bits (292), Expect = 1e-32
 Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 4/103 (3%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRS 103
           DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +KR+
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRA 63

Query: 104 VYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGG 146
            YD++G A       G      G D  +++   FG    +FGG
Sbjct: 64  AYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFG---DIFGG 103

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  112 bits (281), Expect = 2e-30
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-------AEEKFKEISSAYEVLS 97
           D+YS L    +A + ++K  Y+KL   YHPD   +           +KF EI  A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 98  DDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSDGLFGGVGEAGG 152
           ++E +  YD           D L N         L    +   D  F      GG
Sbjct: 71  NEETKREYDLQRCE------DDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGG 119

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score =  109 bits (275), Expect = 4e-30
 Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKT 223
           G      + L+F ++  G  +   V+  +TC+ C G G +    +Q C  C G G     
Sbjct: 1   GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGME--- 57

Query: 224 QRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKV 268
                G     STC +CGG G III  C  C G G+ + K+    
Sbjct: 58  -TINTGPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKKRSGP 101

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  118 bits (296), Expect = 1e-29
 Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 12/176 (6%)

Query: 38  MIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDIN-KSPGAEEKFKEISSAYEVL 96
           +      ++YS L V + A+ +EI+ +++KLA K HPD N  +P A   F +I+ AYEVL
Sbjct: 15  IEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVL 74

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPF-----ELYSAFFGGSDGLFGGVGEAG 151
            D++ R  YD++GE G+     G   +            +               V    
Sbjct: 75  KDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGE 134

Query: 152 GINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGI---EVSCFETCDSCGGTGAKS 204
               NF + G+      +DL  ++ E        +    V+C +    C   G  S
Sbjct: 135 LWFVNFYSPGS---SHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNS 187

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  107 bits (269), Expect = 2e-29
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKR 102
           +  S +         E K   R+L  K+HPD N      A E FK + +    L   EK+
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 103 SVYDRFGEAGITGEY 117
           +  D+  +      +
Sbjct: 74  AFLDQNADRASRRTF 88

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  106 bits (265), Expect = 1e-28
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 39  IRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           +R         L + ++A   +  ++ +Y K  +++HPD     G EEK K++++ Y+ +
Sbjct: 3   MREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLYKKM 59

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSD 141
            D  K +    FG      E       + G D +E +   F   +
Sbjct: 60  EDGVKYAHQPDFGGFWDATE-----IPTYGTDEWEQWWNAFNEEN 99

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  105 bits (263), Expect = 1e-27
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 36  RGMIRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
           + + R         L + ++A   +  ++ +Y K  +++HPD     G EEK K++++ Y
Sbjct: 3   KVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLY 59

Query: 94  EVLSDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPF 130
           + + D  K +    FG      E    S        +
Sbjct: 60  KKMEDGVKYAHQPDFGGFWDATEVFASSLNPGVDAIY 96

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 95.1 bits (237), Expect = 5e-22
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)

Query: 36  RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISS 91
           R + ++   DYY  L V++NA  QEI  +YRKLA ++HPD  ++      AE+KF +I++
Sbjct: 374 RLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAA 433

Query: 92  AYEVLSDDEKRSVYDR 107
           A EVLSD E R  +D 
Sbjct: 434 AKEVLSDPEMRKKFDD 449

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 83.9 bits (207), Expect = 1e-19
 Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 9/100 (9%)

Query: 44  TDYYSTLNVRQNATL-------QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           + +Y          L         ++  YR+L  ++HPD   +    E+   ++ AY  L
Sbjct: 11  STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPD--MAQQGSEQSSTLNQAYHTL 68

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAF 136
            D  +RS Y       I    +  SN     DP  L    
Sbjct: 69  KDPLRRSQYMLKLLRNIDLTQEQTSNEVTTSDPQLLLKVL 108

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score = 76.9 bits (190), Expect = 4e-18
 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC 240
           G  + I +   E CD C G+GAK     Q+C  C G G V   Q    G  +   TC  C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHC 56

Query: 241 GGDGKIIIDHCRRCGGNGEVQ 261
            G G +I D C +C G+G V+
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 76.5 bits (188), Expect = 6e-17
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 45  DYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           DY++   +     L  Q +   ++ L R+YHPD   S    E+         I+ A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 97  SDDEKRSVYDR 107
                R+ Y  
Sbjct: 62  RHPLMRAEYLL 72

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 74.1 bits (181), Expect = 5e-16
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSD 98
           G   +  + +    T +++K  YRK     HPD          A+  F E++ A+    +
Sbjct: 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175

Query: 99  DEKRSVY 105
             ++ +Y
Sbjct: 176 QGQKPLY 182

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 69.6 bits (170), Expect = 2e-15
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 36  RGMIRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
           R + RA        L + +        ++ +Y++ +   HPD     G+    +E++S +
Sbjct: 3   RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLW 59

Query: 94  EVLSDDEKRSVYDRFG 109
                +      +  G
Sbjct: 60  GTFKTEVYNLRMNLGG 75

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score = 68.8 bits (169), Expect = 4e-14
 Identities = 22/97 (22%), Positives = 40/97 (41%)

Query: 240 CGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLF 299
             G  K I    +R   +     +  ++V I PG  +G  +   GEG+ +   +  GDL 
Sbjct: 18  YLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLV 77

Query: 300 VALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           + +         RD  +L  K+++    A+ G +  V
Sbjct: 78  LIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPV 114

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 59.3 bits (144), Expect = 7e-12
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 45  DYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           +    LN+ +N  T +++K  +RK+    HPD   SP       +I+ A + L      
Sbjct: 15  EALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP---FLATKINEAKDFLEKRGIS 70

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 62.4 bits (151), Expect = 1e-11
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 45  DYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           DY+S ++  ++  +   +++  Y++L R  HPD        EK         ++ AY+ L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 97  SDDEKRSVYD 106
                R +Y 
Sbjct: 104 LAPLSRGLYL 113

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score = 59.6 bits (145), Expect = 6e-11
 Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 2/100 (2%)

Query: 237 CSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAG 296
            S C    KI         G       + + + +  G   G  +    EG+     ++  
Sbjct: 17  YSGCTKKMKIS-HKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGD-QTSNNIPA 74

Query: 297 DLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEV 336
           D+   L         RDG ++     +   EA+ G ++ V
Sbjct: 75  DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNV 114

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 15/83 (18%), Positives = 33/83 (39%)

Query: 254 CGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRD 313
             G      K  + + + PG   G  +  + +G+++ +      L   +         RD
Sbjct: 26  RKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRD 85

Query: 314 GLNLFSKISVDYTEAILGTSMEV 336
           G +L   + + + E++LG S  +
Sbjct: 86  GDDLIYTLPLSFKESLLGFSKTI 108

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 50.0 bits (119), Expect = 3e-08
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSD 98
          G   +  + +    T +++K  YRK     HP           A+  F E++ A+    +
Sbjct: 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 50.4 bits (120), Expect = 3e-08
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 47  YSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEIS-SAYEVLSDDEKRSVY 105
           +  + +        ++ SY++     HPD  +  GA    K ++   +E+L +      +
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQE-----AW 97

Query: 106 DRFGEAG 112
           D F   G
Sbjct: 98  DHFNTLG 104

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 5e-06
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 58/290 (20%)

Query: 60  EIKTSYRKLARKYHPDINKS---PGAEEKFKEISSAYEV-----LSDDEKR--------- 102
           E +  Y+ +   +      +      ++  K I S  E+       D             
Sbjct: 13  EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 103 ----SVYDRFGEAGITGEYDGLSNT--SQGVDPFELYSAFFGGSDGLFGGVGEAGGINFN 156
                +  +F E  +   Y  L +   ++   P  +   +    D L+         N +
Sbjct: 73  SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 157 FGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWG 216
                      R   +L   +++   +    V      D   G+G K+   +  C +   
Sbjct: 133 -----------RLQPYLKLRQALLELRPAKNV----LIDGVLGSG-KTWVALDVCLS--- 173

Query: 217 RGGVLKTQRT-PFGL--ISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG 273
                K Q    F +  ++ +  C+      +++     +   N   +S  S        
Sbjct: 174 ----YKVQCKMDFKIFWLN-LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN---IKL 225

Query: 274 VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISV 323
             +    ++R      + +     L V L+V   +    +  NL  KI +
Sbjct: 226 RIHSIQAELR---RLLKSKPYENCLLVLLNVQNAKAW--NAFNLSCKILL 270

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	99.94
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	99.92
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	99.9
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.9
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.88
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.86
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.85
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.85
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.85
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.84
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.84
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.84
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.84
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.83
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.83
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.82
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.81
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.79
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.79
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.78
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.77
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.73
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.71
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.71
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.7
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.69
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.67
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.64
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.64
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.63
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.62
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.62
2guz_A	71	Mitochondrial import inner membrane translocase su	99.61
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.61
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.58
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.5
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.46
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.31
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.24
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	99.02
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	99.01
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.96
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.96
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.87
2guz_B	65	Mitochondrial import inner membrane translocase su	98.76
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	97.81
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.74
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	97.41
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.38
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.27
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.13
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.9
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	90.35

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=2.4e-49  Score=374.65  Aligned_cols=225  Identities=29%  Similarity=0.474  Sum_probs=100.5

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCC-
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGL-  120 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~-  120 (339)
                      ...|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||+|+..+...++.++ 
T Consensus        26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~  105 (329)
T 3lz8_A           26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR  105 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence            3479999999999999999999999999999999998888999999999999999999999999998544221111110 


Q ss_pred             ---CCCCCCCChhhhhccccCCCCCCCCCCCCCCCccccCCCCCCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCC
Q 019562          121 ---SNTSQGVDPFELYSAFFGGSDGLFGGVGEAGGINFNFGNKGNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSC  197 (339)
Q Consensus       121 ---~~~~~~~~~~~~f~~fFg~~~~~fg~~g~~~~~~~~~~~~~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C  197 (339)
                         ++++.+.+..++|++|||+.    ++ +  ++     .....++.|+.++|.|||+|+|+|+++++.+++.+.|   
T Consensus       106 ~~~~~~f~~~~f~diF~~~Fg~~----g~-~--~~-----~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~---  170 (329)
T 3lz8_A          106 QTHEQSYSQQDFDDIFSSMFGQQ----AH-Q--RR-----RQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN---  170 (329)
T ss_dssp             -------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC---
T ss_pred             ccccCCcCCCchhhhhHhhhcCc----CC-C--CC-----CCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec---
Confidence               11111223457788887642    10 0  00     1124578999999999999999999999999876532   


Q ss_pred             CCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEeeceEEEEEeCCCCCCC
Q 019562          198 GGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNG  277 (339)
Q Consensus       198 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G  277 (339)
                                        |.|.+                                      .+...+.++|+||||+++|
T Consensus       171 ------------------g~G~v--------------------------------------~~~~~~~l~V~IP~Gv~~G  194 (329)
T 3lz8_A          171 ------------------VFGMI--------------------------------------ESETPKTLNVKIPAGVVDG  194 (329)
T ss_dssp             ------------------SCC-C--------------------------------------CEEEEEEEEEEECTTCCTT
T ss_pred             ------------------CCeEE--------------------------------------EEecceEEEEeCCCCCCCC
Confidence                              11211                                      1222467999999999999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccChhhhhcCCeEEee
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      ++|+|+|+|++..+++.+|||||+|+|++|+.|+|+|+||+++++|+|+|||||++++|+
T Consensus       195 ~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~Vp  254 (329)
T 3lz8_A          195 QRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVP  254 (329)
T ss_dssp             CEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEEC
T ss_pred             CEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEE
Confidence            999999999997777889999999999999999999999999999999999999999997

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=2.4e-41  Score=308.72  Aligned_cols=174  Identities=25%  Similarity=0.527  Sum_probs=162.7

Q ss_pred             CCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcce-eeeecCCC
Q 019562          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLI-SQVSTCSK  239 (339)
Q Consensus       161 ~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~-~~~~~C~~  239 (339)
                      ..++.|++++|.|||||||+|+++++.+++.+.|+.|+|+|..... ..+|+.|+|+|.++..+++++ ++ +...+|+.
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~   85 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV   85 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence            3578999999999999999999999999999999999999999887 499999999999888887776 44 34579999


Q ss_pred             CCCccEEE--eecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccce
Q 019562          240 CGGDGKII--IDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNL  317 (339)
Q Consensus       240 C~G~G~~~--~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL  317 (339)
                      |+|+|+++  .++|+.|.|.+++.+.+.++|.||||+++|++|+|+|+|++.. ++.+|||||+|++++|+.|+|+|+||
T Consensus        86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL  164 (248)
T 1nlt_A           86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDL  164 (248)
T ss_dssp             CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEE
T ss_pred             CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEE
Confidence            99999999  8999999999999999999999999999999999999999864 56899999999999999999999999


Q ss_pred             eEecccChhhhhcCCeEEee
Q 019562          318 FSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       318 ~~~~~I~l~eAllG~~~~V~  337 (339)
                      |++++|+|+|||||++++|+
T Consensus       165 ~~~~~Isl~eAllG~~i~v~  184 (248)
T 1nlt_A          165 VYEAEIDLLTAIAGGEFALE  184 (248)
T ss_dssp             EEEEEEEHHHHHHCBCCEEE
T ss_pred             EEEEEeCHHHHhcCCEEEEe
Confidence            99999999999999999997

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=99.94  E-value=1.3e-26  Score=201.62  Aligned_cols=114  Identities=18%  Similarity=0.306  Sum_probs=96.5

Q ss_pred             CcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCc
Q 019562          164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD  243 (339)
Q Consensus       164 g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  243 (339)
                      +.|++++|.|||||||+|+++++.+.+.                   |.                               
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~-------------------c~-------------------------------   31 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHK-------------------RL-------------------------------   31 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEE-------------------EE-------------------------------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecc-------------------cC-------------------------------
Confidence            3688999999999999999999977531                   22                               


Q ss_pred             cEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEeccc
Q 019562          244 GKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISV  323 (339)
Q Consensus       244 G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I  323 (339)
                               .|.|.+++.+.+.++|.||||+++|++|+|+|+|++.. ++.+|||||+|++++|+.|+|+|+||+++++|
T Consensus        32 ---------~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I  101 (181)
T 3agx_A           32 ---------NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARI  101 (181)
T ss_dssp             ---------CTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred             ---------CCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEc
Confidence                     23333344457889999999999999999999999875 57899999999999999999999999999999


Q ss_pred             ChhhhhcCCeEEee
Q 019562          324 DYTEAILGTSMEVG  337 (339)
Q Consensus       324 ~l~eAllG~~~~V~  337 (339)
                      +|+|||||++++|+
T Consensus       102 sl~eAllG~~i~v~  115 (181)
T 3agx_A          102 SLREALCGCTVNVP  115 (181)
T ss_dssp             EHHHHHHCEEEEEE
T ss_pred             CHHHHhCCCEEEeE
Confidence            99999999999997

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=2.5e-25  Score=193.47  Aligned_cols=113  Identities=21%  Similarity=0.349  Sum_probs=102.6

Q ss_pred             CcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCc
Q 019562          164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD  243 (339)
Q Consensus       164 g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  243 (339)
                      +.|++++|.|||+|||+|+++++.+.+.+.|+.                                               
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~-----------------------------------------------   35 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH-----------------------------------------------   35 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT-----------------------------------------------
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC-----------------------------------------------
Confidence            679999999999999999999999998877741                                               


Q ss_pred             cEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEeccc
Q 019562          244 GKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISV  323 (339)
Q Consensus       244 G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I  323 (339)
                                    +.+.+.+.++|.||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|
T Consensus        36 --------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~I  101 (180)
T 2q2g_A           36 --------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTI  101 (180)
T ss_dssp             --------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEE
T ss_pred             --------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEc
Confidence                          233446789999999999999999999999866678899999999999999999999999999999


Q ss_pred             ChhhhhcCCeEEee
Q 019562          324 DYTEAILGTSMEVG  337 (339)
Q Consensus       324 ~l~eAllG~~~~V~  337 (339)
                      +|+|||||++++|+
T Consensus       102 sl~eAllG~~i~v~  115 (180)
T 2q2g_A          102 PLVRALTGFTCPVT  115 (180)
T ss_dssp             EHHHHHHCEEEEEE
T ss_pred             CHHHHhCCCEEEee
Confidence            99999999999987

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=99.90  E-value=9.4e-24  Score=181.85  Aligned_cols=109  Identities=17%  Similarity=0.404  Sum_probs=97.6

Q ss_pred             cceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCcc
Q 019562          165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG  244 (339)
Q Consensus       165 ~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  244 (339)
                      .|++++|.|||+|||+|+++++.+.+..    +                   .|                          
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~-------------------~G--------------------------   31 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P-------------------HG--------------------------   31 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-------------------TT--------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-------------------CC--------------------------
Confidence            3789999999999999999999987641    0                   11                          


Q ss_pred             EEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEecccC
Q 019562          245 KIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSKISVD  324 (339)
Q Consensus       245 ~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~~~I~  324 (339)
                                    .+ +.+.++|.||||+++|++|+|+|+|++..+++.+|||||+|++++|+.|+|+|+||+++++|+
T Consensus        32 --------------~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Is   96 (170)
T 1c3g_A           32 --------------AS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS   96 (170)
T ss_dssp             --------------EE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCB
T ss_pred             --------------cE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcC
Confidence                          12 357899999999999999999999998777889999999999999999999999999999999


Q ss_pred             hhhhhcCCeEEee
Q 019562          325 YTEAILGTSMEVG  337 (339)
Q Consensus       325 l~eAllG~~~~V~  337 (339)
                      |+|||||++++|+
T Consensus        97 l~eAllG~~~~v~  109 (170)
T 1c3g_A           97 FKESLLGFSKTIQ  109 (170)
T ss_dssp             HHHHHHCEEEEEE
T ss_pred             HHHHhCCCeEEee
Confidence            9999999999987

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.90  E-value=1.8e-24  Score=171.27  Aligned_cols=97  Identities=42%  Similarity=0.710  Sum_probs=69.7

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLS  121 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~  121 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++ ++.++++|++|++||++|+||.+|+.||++|++++..+..+++
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~   81 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG   81 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence            579999999999999999999999999999999997 4778999999999999999999999999999988764321111


Q ss_pred             CCCCCCChhhhhccccCC
Q 019562          122 NTSQGVDPFELYSAFFGG  139 (339)
Q Consensus       122 ~~~~~~~~~~~f~~fFg~  139 (339)
                      +...++++.++|+.||++
T Consensus        82 ~~~~~~~~~~~f~~~f~~   99 (103)
T 1bq0_A           82 GFGGGADFSDIFGDVFGD   99 (103)
T ss_dssp             ------------------
T ss_pred             CCCCCCCHHHHHHHHHHh
Confidence            111123445667777764

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.88  E-value=5.8e-23  Score=153.96  Aligned_cols=73  Identities=59%  Similarity=1.041  Sum_probs=69.5

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~  115 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||+++++.+.+.|+.|++||++|+||.+|+.||++|++++..
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   74 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence            5799999999999999999999999999999999988889999999999999999999999999999987753

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=2.2e-22  Score=154.68  Aligned_cols=74  Identities=49%  Similarity=0.818  Sum_probs=69.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~  115 (339)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||.+|.+++..
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   78 (88)
T 2ctr_A            5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS   78 (88)
T ss_dssp             CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence            45799999999999999999999999999999999988889999999999999999999999999999877653

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=4.1e-22  Score=149.70  Aligned_cols=72  Identities=49%  Similarity=0.846  Sum_probs=68.1

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~  113 (339)
                      ...|||+||||+++|+.++||+|||+|+++||||+++.+.+.++|++|++||++|+||.+|+.||++|.++.
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   76 (78)
T 2ctp_A            5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS   76 (78)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            457999999999999999999999999999999999888899999999999999999999999999998653

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=9.1e-22  Score=148.14  Aligned_cols=73  Identities=51%  Similarity=0.857  Sum_probs=67.6

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCc
Q 019562           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGI  113 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~  113 (339)
                      ....|||+||||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+.
T Consensus         4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   77 (79)
T 2dn9_A            4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS   77 (79)
T ss_dssp             SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence            34579999999999999999999999999999999987 57889999999999999999999999999997653

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.85  E-value=8.1e-22  Score=151.50  Aligned_cols=72  Identities=50%  Similarity=0.861  Sum_probs=68.1

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccC
Q 019562           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG  112 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g  112 (339)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||.+|+.+
T Consensus        14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            346799999999999999999999999999999999988889999999999999999999999999999764

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=1.3e-21  Score=148.42  Aligned_cols=72  Identities=49%  Similarity=0.826  Sum_probs=66.6

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..  .+.++|++|++||++|+||.+|+.||.+|++++.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~   81 (82)
T 2ej7_A            8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS   81 (82)
T ss_dssp             SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence            47999999999999999999999999999999998753  5788999999999999999999999999987653

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.84  E-value=6.9e-22  Score=153.15  Aligned_cols=74  Identities=46%  Similarity=0.728  Sum_probs=67.5

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCC
Q 019562           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~  115 (339)
                      |.+..|||+||||+++|+.+|||+|||+|+++||||+++  ...++|++|++||++|+||.+|+.||++|++++..
T Consensus         4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   77 (92)
T 2o37_A            4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGLEAARS   77 (92)
T ss_dssp             CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred             cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence            446789999999999999999999999999999999985  34679999999999999999999999999887653

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.84  E-value=1.2e-21  Score=145.30  Aligned_cols=70  Identities=50%  Similarity=0.823  Sum_probs=62.5

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhccccc
Q 019562           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~  111 (339)
                      |....|||++|||+++|+.++||+|||+|+++||||+++.  +.++|++|++||++|+||.+|+.||++|++
T Consensus         4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999999999853  478999999999999999999999999863

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=1.4e-21  Score=156.89  Aligned_cols=79  Identities=25%  Similarity=0.502  Sum_probs=71.7

Q ss_pred             cccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           36 RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        36 ~~~~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      ....+....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++|.+++.
T Consensus        12 ~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           12 LNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCCCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             HhccccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            3344456789999999999999999999999999999999997 678999999999999999999999999999987654

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=3.5e-21  Score=149.23  Aligned_cols=73  Identities=49%  Similarity=0.760  Sum_probs=67.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhccCchhhhhhhcccccCcCC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~  115 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..  .++++|++|++||++|+||.+|+.||++|.+++..
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA   82 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            36999999999999999999999999999999998743  67899999999999999999999999999887653

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.83  E-value=2.4e-21  Score=154.76  Aligned_cols=79  Identities=46%  Similarity=0.799  Sum_probs=71.3

Q ss_pred             cccccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           36 RGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        36 ~~~~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      .+...+...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..++.
T Consensus         9 ~r~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A            9 QRSLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             CCCTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CcccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            3344556789999999999999999999999999999999997 467899999999999999999999999999987654

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.83  E-value=3e-21  Score=151.44  Aligned_cols=72  Identities=50%  Similarity=0.886  Sum_probs=64.3

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--chHHHHHHHHHHHhhccCchhhhhhhcccccCcCC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--GAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITG  115 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~  115 (339)
                      .|||+||||+++|+.+|||+|||+|+++||||+++..  .+.++|++|++||++|+||.+|+.||.+|.+++..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            5899999999999999999999999999999998753  47899999999999999999999999999887653

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=1.3e-21  Score=155.04  Aligned_cols=103  Identities=30%  Similarity=0.623  Sum_probs=92.2

Q ss_pred             CcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCc
Q 019562          164 GLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGD  243 (339)
Q Consensus       164 g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  243 (339)
                      |.|+.++|.|||+|||+|.+++|.+++.+.|+.|+|+|........+|+.|+|+|.+...+    |+|++..+|+.|.|+
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~----G~~~~~~~C~~C~G~   76 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT----GPFVMRSTCRRCGGR   76 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE----TTEEEEEECSSSSSS
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe----CCEEEEEECCcCCCc
Confidence            3577889999999999999999999999999999999999888889999999999876553    556667899999999


Q ss_pred             cEEEeecccccCCceEEeeceEEEEEe
Q 019562          244 GKIIIDHCRRCGGNGEVQSKRSMKVVI  270 (339)
Q Consensus       244 G~~~~~~C~~C~g~g~~~~~~~l~v~I  270 (339)
                      |+++.++|+.|.|.+++.+.+.|+|+|
T Consensus        77 G~~i~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           77 GSIIISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SEECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred             ceECCCcCCCCCCeeEEEEEEEEEEEc
Confidence            999999999999999998888777654

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.81  E-value=1.9e-20  Score=147.01  Aligned_cols=68  Identities=41%  Similarity=0.547  Sum_probs=63.6

Q ss_pred             ccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcc
Q 019562           41 AAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~  108 (339)
                      +...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++
T Consensus        14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~   82 (99)
T 2yua_A           14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG   82 (99)
T ss_dssp             SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred             CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence            34579999999999999999999999999999999996 577899999999999999999999999984

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.79  E-value=3.9e-20  Score=143.79  Aligned_cols=69  Identities=32%  Similarity=0.580  Sum_probs=63.6

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHhhccCchhhhhhhcccc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-------~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~  110 (339)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++.       +.+.++|++|++||++|+||.+|+.||.+..
T Consensus        14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            45899999999999999999999999999999999863       4578999999999999999999999998654

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.79  E-value=9.7e-20  Score=161.33  Aligned_cols=89  Identities=38%  Similarity=0.712  Sum_probs=75.7

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCcccCCCC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGEYDGLSN  122 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~~~~~~~  122 (339)
                      .|||++|||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++|++++....     
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~-----   76 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ-----   76 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC-----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc-----
Confidence            58999999999999999999999999999999996 678999999999999999999999999999998875432     


Q ss_pred             CCCCCChhhhhccccC
Q 019562          123 TSQGVDPFELYSAFFG  138 (339)
Q Consensus       123 ~~~~~~~~~~f~~fFg  138 (339)
                       ......+.+|...|+
T Consensus        77 -~~~~~~~~~~~~~fg   91 (210)
T 3apq_A           77 -GGQYESWSYYRYDFG   91 (210)
T ss_dssp             -SCCCCCHHHHHHSSS
T ss_pred             -ccccccccccccccc
Confidence             122344555665554

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.78  E-value=9e-20  Score=140.59  Aligned_cols=65  Identities=32%  Similarity=0.495  Sum_probs=60.9

Q ss_pred             cccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhh
Q 019562           40 RAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSV  104 (339)
Q Consensus        40 ~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~  104 (339)
                      +....|||+||||+++|+.+|||+|||+|+++||||+++++.+.++|++|++||++|+|+.+|+.
T Consensus        23 ~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           23 IRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             HHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             HhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            34568999999999999999999999999999999999988999999999999999999999864

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.77  E-value=9.6e-20  Score=145.48  Aligned_cols=71  Identities=39%  Similarity=0.614  Sum_probs=65.6

Q ss_pred             ccccCcccccccCCCC-CHHHHHHHHHHHHHHhCCCCCCC----cchHHHHHHHHHHHhhccCchhhhhhhccccc
Q 019562           41 AAGTDYYSTLNVRQNA-TLQEIKTSYRKLARKYHPDINKS----PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (339)
Q Consensus        41 ~~~~d~y~iLgv~~~a-~~~eIk~ayr~la~~~hPd~~~~----~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~  111 (339)
                      ....|||++|||+++| +.+|||+|||+|+++||||+++.    +.+.++|++|++||++|+||.+|+.||+++..
T Consensus        12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~   87 (109)
T 2qsa_A           12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH   87 (109)
T ss_dssp             TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence            3468999999999999 99999999999999999999875    56889999999999999999999999998864

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.73  E-value=2.3e-18  Score=145.96  Aligned_cols=69  Identities=32%  Similarity=0.562  Sum_probs=63.0

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-------hHHHHHHHHHHHhhccCchhhhhhhcccc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG-------AEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~-------~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~  110 (339)
                      ...|||+||||+++|+.++||+|||+|++++|||+++...       +.++|++|++||++|+||.+|+.||..+.
T Consensus         8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            4579999999999999999999999999999999987542       57999999999999999999999998653

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.71  E-value=5.1e-19  Score=141.87  Aligned_cols=65  Identities=25%  Similarity=0.422  Sum_probs=60.8

Q ss_pred             ccCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccc
Q 019562           43 GTDYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~--~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~  110 (339)
                      ..|||+||||+++|+.  ++||+|||+||+++|||++++   .++|++|++||+||+||.+|+.||.+|.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4689999999999999  999999999999999999865   5799999999999999999999999875

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.71  E-value=3.2e-18  Score=128.55  Aligned_cols=66  Identities=14%  Similarity=0.296  Sum_probs=59.7

Q ss_pred             ccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccC
Q 019562           43 GTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG  112 (339)
Q Consensus        43 ~~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g  112 (339)
                      ..++|++|||+++  ++.++||+|||+||+++|||++.   +.++|++|++||++|+|+.+|.. +.||+++
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~---~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~   77 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLR-MNLGGTG   77 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC---CHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence            4689999999999  99999999999999999999974   46899999999999999999988 5677654

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.70  E-value=6.1e-19  Score=150.92  Aligned_cols=66  Identities=24%  Similarity=0.452  Sum_probs=58.8

Q ss_pred             cccCcccccccCCCCC--HHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccc
Q 019562           42 AGTDYYSTLNVRQNAT--LQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~--~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~  110 (339)
                      ...|||++|||+++|+  .+|||+|||+||+++|||++++   +++|++|++||++|+||.+|+.||++|.
T Consensus         9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E            9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            4579999999999998  6999999999999999999865   3799999999999999999999999995

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.69  E-value=5.3e-18  Score=129.75  Aligned_cols=65  Identities=23%  Similarity=0.200  Sum_probs=58.1

Q ss_pred             ccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhccCchhhh
Q 019562           39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRS  103 (339)
Q Consensus        39 ~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--~~~~~~f~~i~~Ay~vL~d~~~r~  103 (339)
                      ..+...++|+||||+++|+.+|||+|||+||++||||+++.  +.+.++|++|++||++|+|...|.
T Consensus        11 ~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~   77 (88)
T 1iur_A           11 RGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD   77 (88)
T ss_dssp             SSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             CCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence            34455799999999999999999999999999999999975  347899999999999999988773

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.64  E-value=5.1e-17  Score=139.85  Aligned_cols=62  Identities=21%  Similarity=0.393  Sum_probs=58.3

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhccCchhhhhh
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVY  105 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~f~~i~~Ay~vL~d~~~r~~y  105 (339)
                      .|||++|||++.|+.++||+|||+|+++||||+++...    ++++|++|++||++|+|+.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            58999999999999999999999999999999987543    789999999999999999999987

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.64  E-value=1.2e-16  Score=141.17  Aligned_cols=66  Identities=23%  Similarity=0.428  Sum_probs=59.6

Q ss_pred             cccCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           42 AGTDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        42 ~~~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~------~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      ...|||++|||+++  ++.++||+|||+|+++||||++++..      +.++|++|++||+||+||.+|+.||.
T Consensus        41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            46799999999986  79999999999999999999987432      56789999999999999999999995

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.63  E-value=1e-16  Score=137.76  Aligned_cols=65  Identities=25%  Similarity=0.369  Sum_probs=59.8

Q ss_pred             CcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc------hHHHHHHHHHHHhhccCchhhhhhhccc
Q 019562           45 DYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPG------AEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (339)
Q Consensus        45 d~y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~------~~~~f~~i~~Ay~vL~d~~~r~~yd~~G  109 (339)
                      |||++|||++++  +.++||+|||+|+++||||++++..      +.++|+.|++||++|+||.+|+.||...
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            899999999999  9999999999999999999987532      4579999999999999999999999853

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.62  E-value=8.9e-17  Score=123.47  Aligned_cols=55  Identities=20%  Similarity=0.309  Sum_probs=50.5

Q ss_pred             cCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhccC
Q 019562           44 TDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSD   98 (339)
Q Consensus        44 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~f~~i~~Ay~vL~d   98 (339)
                      .++|++|||++.||.+|||+|||+||++||||++++..    ++++|++|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999987432    78899999999999975

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.62  E-value=3.1e-17  Score=171.73  Aligned_cols=78  Identities=40%  Similarity=0.718  Sum_probs=40.9

Q ss_pred             ccccccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcCCc
Q 019562           39 IRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGITGE  116 (339)
Q Consensus        39 ~~~~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~~~  116 (339)
                      ......|||++|||+++||.+|||+|||+||++||||+++ ++.+.++|++|++||++|+||.+|+.||++|++++...
T Consensus        16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~   94 (780)
T 3apo_A           16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   94 (780)
T ss_dssp             -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred             CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence            3445689999999999999999999999999999999996 67789999999999999999999999999999887643

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.61  E-value=1.6e-16  Score=116.86  Aligned_cols=57  Identities=23%  Similarity=0.289  Sum_probs=52.0

Q ss_pred             ccCcccccccCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhh
Q 019562           43 GTDYYSTLNVRQ-NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR  102 (339)
Q Consensus        43 ~~d~y~iLgv~~-~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r  102 (339)
                      ..++|+||||++ +|+.+|||+|||+|+++||||++   ++.++|++|++||++|+++..|
T Consensus        13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhc
Confidence            468999999999 79999999999999999999996   4567999999999999998765

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.61  E-value=1.3e-16  Score=126.25  Aligned_cols=58  Identities=17%  Similarity=0.254  Sum_probs=51.9

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------chHHHHHHHHHHHhhccCchh
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSP--------GAEEKFKEISSAYEVLSDDEK  101 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--------~~~~~f~~i~~Ay~vL~d~~~  101 (339)
                      ..|||++|+++. ||.+|||+|||+||++||||+++++        .++++|++|++||++|+|+..
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~  105 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP  105 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence            479999999996 9999999999999999999998632        358999999999999999863

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.58  E-value=3.7e-16  Score=135.29  Aligned_cols=64  Identities=23%  Similarity=0.456  Sum_probs=58.7

Q ss_pred             ccCccccc------ccCC-CCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcc
Q 019562           43 GTDYYSTL------NVRQ-NATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRF  108 (339)
Q Consensus        43 ~~d~y~iL------gv~~-~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~  108 (339)
                      ..|||++|      |+++ +|+.++||+|||+|+++||||++++  +.++|+.|++||++|+||.+|+.||..
T Consensus        10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~   80 (181)
T 3uo3_A           10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLK   80 (181)
T ss_dssp             SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence            47999999      4665 8999999999999999999999865  778999999999999999999999984

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.50  E-value=1.6e-14  Score=131.43  Aligned_cols=117  Identities=23%  Similarity=0.472  Sum_probs=80.0

Q ss_pred             eeCCCCCCCCccC---------CCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEee-------------
Q 019562          192 ETCDSCGGTGAKS---------SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIID-------------  249 (339)
Q Consensus       192 ~~C~~C~G~G~~~---------~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~-------------  249 (339)
                      ..|+.|+|+|...         ...+.+|+.|+|+|+++..          ..+|+.|+|.|.+...             
T Consensus        55 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~----------~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~  124 (248)
T 1nlt_A           55 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP----------KDRCKSCNGKKVENERKILEVHVEPGMKD  124 (248)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT----------TSBCSSSTTSCEEEEEEEEEEEECTTCCT
T ss_pred             ccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc----------CCCCcccCCCceEeeeEEEEEEECCCccC
Confidence            6899999999742         1246789999999987521          1789999999976530             


Q ss_pred             ------------------------------------------------cccccCCceEEee--ceEEEEEeCCC--CCCC
Q 019562          250 ------------------------------------------------HCRRCGGNGEVQS--KRSMKVVIPPG--VSNG  277 (339)
Q Consensus       250 ------------------------------------------------~C~~C~g~g~~~~--~~~l~v~Ip~G--~~~G  277 (339)
                                                                      .=..+++...+..  ...++|.||||  +++|
T Consensus       125 G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g  204 (248)
T 1nlt_A          125 GQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPG  204 (248)
T ss_dssp             TCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTT
T ss_pred             CCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCC
Confidence                                                            0112344444432  23689999999  9999


Q ss_pred             CEEEEccCCCCCCCCCCCcCEEEEEEEecCCC--cccccccee
Q 019562          278 ATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG--IHRDGLNLF  318 (339)
Q Consensus       278 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~--f~R~g~dL~  318 (339)
                      ++++|+|+|++...+..+|||||+|+|+.|..  +..++.+|+
T Consensus       205 ~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~l  247 (248)
T 1nlt_A          205 MRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKKL  247 (248)
T ss_dssp             CEEEETTCSCBCSSSCSBCCEEEEEEEECCC------------
T ss_pred             eEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHhh
Confidence            99999999999654446799999999999988  877776654

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.46  E-value=3.4e-14  Score=106.50  Aligned_cols=78  Identities=38%  Similarity=0.856  Sum_probs=67.7

Q ss_pred             ccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEE
Q 019562          181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV  260 (339)
Q Consensus       181 G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~  260 (339)
                      |.+++|.+++.+.|+.|+|+|........+|+.|+|+|+++..+    |+++...+|+.|+|+|+++.++|+.|.|.+++
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~   76 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCEEeeECcCCCCccEECCCcCCCCCCeEEE
Confidence            45677888999999999999998777778999999999987644    66666689999999999999999999999987


Q ss_pred             ee
Q 019562          261 QS  262 (339)
Q Consensus       261 ~~  262 (339)
                      .+
T Consensus        77 ~~   78 (79)
T 1exk_A           77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ee
Confidence            53

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.31  E-value=7.5e-13  Score=105.21  Aligned_cols=84  Identities=23%  Similarity=0.427  Sum_probs=71.1

Q ss_pred             CCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCC
Q 019562          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (339)
Q Consensus       162 ~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (339)
                      +.|.|+.+++.|||.||+.|+++.|...                                                    
T Consensus         9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl----------------------------------------------------   36 (109)
T 3i38_A            9 IVGHNLEIVLPLAPWEAALGAKVTVPTL----------------------------------------------------   36 (109)
T ss_dssp             EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred             EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence            4688999999999999999998776431                                                    


Q ss_pred             CccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       242 G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                                           ...++|.||+|+++|++++++|+|++. .+ .+|||||+|+|..|..+..++.+++.+
T Consensus        37 ---------------------dG~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~~   92 (109)
T 3i38_A           37 ---------------------KESILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKARELWQQ   92 (109)
T ss_dssp             ---------------------SSCEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred             ---------------------CCCEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHHHHHHHH
Confidence                                 113679999999999999999999997 33 789999999999999988887776654

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.24  E-value=3.8e-12  Score=103.07  Aligned_cols=88  Identities=24%  Similarity=0.363  Sum_probs=69.4

Q ss_pred             CCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCC
Q 019562          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (339)
Q Consensus       162 ~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (339)
                      ++|.|+.+++.|+|.+|+.|+++.|...                                                    
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl----------------------------------------------------   31 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence            4578999999999999999998776421                                                    


Q ss_pred             CccEEEeecccccCCceEEeeceEEEEEeCCC--CCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCC--ccccccce
Q 019562          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQG--IHRDGLNL  317 (339)
Q Consensus       242 G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G--~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~--f~R~g~dL  317 (339)
                                          ..+.++|+||+|  +++|++++++|+|++..++..+|||||+|+|+.|..  +..++.++
T Consensus        32 --------------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~   91 (121)
T 1xao_A           32 --------------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKK   91 (121)
T ss_dssp             --------------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred             --------------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
Confidence                                023578999999  999999999999999654446899999999999988  88777776


Q ss_pred             eEec
Q 019562          318 FSKI  321 (339)
Q Consensus       318 ~~~~  321 (339)
                      +.++
T Consensus        92 l~~l   95 (121)
T 1xao_A           92 LEEI   95 (121)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6554

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=99.02  E-value=1.7e-10  Score=99.73  Aligned_cols=86  Identities=12%  Similarity=0.160  Sum_probs=70.7

Q ss_pred             CCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCC
Q 019562          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC  240 (339)
Q Consensus       161 ~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  240 (339)
                      .+.|.|+.+++.|||.||+.|+++.|...                                                   
T Consensus        89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------  117 (180)
T 2q2g_A           89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL---------------------------------------------------  117 (180)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCEEEEEECT---------------------------------------------------
T ss_pred             EEcCCEEEEEEEcCHHHHhCCCEEEeeCC---------------------------------------------------
Confidence            35689999999999999999998776432                                                   


Q ss_pred             CCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCC-CCCcCEEEEEEEecCCCcccccccee
Q 019562          241 GGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRR-SLAGDLFVALHVDEKQGIHRDGLNLF  318 (339)
Q Consensus       241 ~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~-~~~GDLiv~i~v~~~~~f~R~g~dL~  318 (339)
                                           ....++|.||+|+++|++++++|+|++..++ +.+|||||+|+|..|..+..++.+++
T Consensus       118 ---------------------dG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l  175 (180)
T 2q2g_A          118 ---------------------DNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLI  175 (180)
T ss_dssp             ---------------------TCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHH
T ss_pred             ---------------------CCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHH
Confidence                                 0125778999999999999999999996533 46799999999999998887776654

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=99.01  E-value=1.8e-10  Score=99.63  Aligned_cols=87  Identities=21%  Similarity=0.301  Sum_probs=71.3

Q ss_pred             CCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCC
Q 019562          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC  240 (339)
Q Consensus       161 ~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  240 (339)
                      .+.|.|+.+++.|||.||+.|+++.|...                                                   
T Consensus        89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------  117 (181)
T 3agx_A           89 KRDGSDVIYPARISLREALCGCTVNVPTL---------------------------------------------------  117 (181)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCEEEEEECT---------------------------------------------------
T ss_pred             eeeCCcEEEEEEcCHHHHhCCCEEEeECC---------------------------------------------------
Confidence            35689999999999999999998776432                                                   


Q ss_pred             CCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCC-CCCCcCEEEEEEEecCCCccccccceeE
Q 019562          241 GGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRR-RSLAGDLFVALHVDEKQGIHRDGLNLFS  319 (339)
Q Consensus       241 ~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~~GDLiv~i~v~~~~~f~R~g~dL~~  319 (339)
                                           ....++|.||+|+++|++++++|+|++..+ .+.+|||||+|+|..|..+..++.+++.
T Consensus       118 ---------------------dG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~  176 (181)
T 3agx_A          118 ---------------------DGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLE  176 (181)
T ss_dssp             ---------------------TSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred             ---------------------CCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence                                 012577899999999999999999999654 3467999999999999988877766543

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.96  E-value=3.2e-10  Score=108.54  Aligned_cols=65  Identities=49%  Similarity=0.716  Sum_probs=56.0

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      ..++|.+||+.+.++.++|+++|+++++++|||+.+.+.    ++++|++|++||++|+|+++|+.||+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            358999999999999999999999999999999987543    88999999999999999999999996

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.96  E-value=3e-10  Score=97.27  Aligned_cols=85  Identities=26%  Similarity=0.320  Sum_probs=69.8

Q ss_pred             CCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCC
Q 019562          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC  240 (339)
Q Consensus       161 ~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  240 (339)
                      .+.|.|+.+++.|+|.||+.|+++.|...                                                   
T Consensus        83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl---------------------------------------------------  111 (170)
T 1c3g_A           83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI---------------------------------------------------  111 (170)
T ss_dssp             EEETTEEEEEECCBHHHHHHCEEEEEECS---------------------------------------------------
T ss_pred             EEeCCcEeEEEEcCHHHHhCCCeEEeeCC---------------------------------------------------
Confidence            34689999999999999999998876432                                                   


Q ss_pred             CCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCC-CCCcCEEEEEEEecCCCccccccce
Q 019562          241 GGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRR-SLAGDLFVALHVDEKQGIHRDGLNL  317 (339)
Q Consensus       241 ~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~-~~~GDLiv~i~v~~~~~f~R~g~dL  317 (339)
                                           ....++|.||+|+++|++++++|+|++..++ +.+|||||+|+|..|..+..++..+
T Consensus       112 ---------------------dG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~  168 (170)
T 1c3g_A          112 ---------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRA  168 (170)
T ss_dssp             ---------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHH
T ss_pred             ---------------------CCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHh
Confidence                                 0124678999999999999999999996533 3579999999999999887776554

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.87  E-value=8e-10  Score=104.18  Aligned_cols=86  Identities=22%  Similarity=0.435  Sum_probs=71.7

Q ss_pred             CCCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCC
Q 019562          161 GNFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC  240 (339)
Q Consensus       161 ~~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  240 (339)
                      .+.|.||.+++.|+|.||+.|+++.|...                                                   
T Consensus       228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL---------------------------------------------------  256 (329)
T 3lz8_A          228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL---------------------------------------------------  256 (329)
T ss_dssp             EEETTEEEEEEEECHHHHHHCEEEEECCS---------------------------------------------------
T ss_pred             EEcCCcEEEEEECCHHHHcCCCeEEEECC---------------------------------------------------
Confidence            35689999999999999999998776432                                                   


Q ss_pred             CCccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCCCccccccceeEe
Q 019562          241 GGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQGIHRDGLNLFSK  320 (339)
Q Consensus       241 ~G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~R~g~dL~~~  320 (339)
                                            ...++|+||+|+++|++++|+|+|++..  ..+|||||+|+|..|..+..++..|+.+
T Consensus       257 ----------------------dG~v~l~ip~gt~~g~~~rl~G~GmP~~--~~rGDL~v~~~V~~P~~l~~~q~~~l~~  312 (329)
T 3lz8_A          257 ----------------------KESILLTVPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDEKARELWQQ  312 (329)
T ss_dssp             ----------------------SSCEEEEECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred             ----------------------CCCEEEEECCCCCCCCEEEEcCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence                                  1125799999999999999999999964  4689999999999999988877776655


Q ss_pred             c
Q 019562          321 I  321 (339)
Q Consensus       321 ~  321 (339)
                      +
T Consensus       313 ~  313 (329)
T 3lz8_A          313 L  313 (329)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.76  E-value=4.7e-09  Score=75.01  Aligned_cols=53  Identities=15%  Similarity=0.179  Sum_probs=47.0

Q ss_pred             cCcccccccCCC---CCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCc
Q 019562           44 TDYYSTLNVRQN---ATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDD   99 (339)
Q Consensus        44 ~d~y~iLgv~~~---a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~   99 (339)
                      .+-|.||||+++   ++.++|+++||+|....|||+.   ++.....+|++|++.|...
T Consensus         4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence            356889999999   9999999999999999999985   6677888999999998643

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.81  E-value=6.4e-06  Score=64.39  Aligned_cols=46  Identities=33%  Similarity=0.826  Sum_probs=37.4

Q ss_pred             eeeCCCCCCCCccC-----CCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe
Q 019562          191 FETCDSCGGTGAKS-----SNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (339)
Q Consensus       191 ~~~C~~C~G~G~~~-----~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~  248 (339)
                      ...|+.|+|+|...     .....+|+.|+|+|+++.            .+|+.|+|.|++..
T Consensus        45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~~   95 (104)
T 2ctt_A           45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII------------SPCVVCRGAGQAKQ   95 (104)
T ss_dssp             CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS------------SCCSSSSSCSEECC
T ss_pred             CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC------------CcCCCCCCeeEEEE
Confidence            46799999999752     124579999999998764            78999999998864

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.74  E-value=7.3e-06  Score=60.60  Aligned_cols=46  Identities=37%  Similarity=0.873  Sum_probs=36.6

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~  248 (339)
                      ...|+.|+|+|....     ....+|+.|+|+|+++.            .+|+.|+|.|++.+
T Consensus        28 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~------------~~C~~C~G~G~~~~   78 (79)
T 1exk_A           28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------------DPCNKCHGHGRVER   78 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------------SBCGGGTTSSEEEC
T ss_pred             CCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECC------------CcCCCCCCeEEEee
Confidence            468999999997532     12468999999998753            68999999998753

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=97.41  E-value=8.2e-06  Score=82.96  Aligned_cols=78  Identities=18%  Similarity=0.326  Sum_probs=58.2

Q ss_pred             EEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCC---CcccCCCCCCccEEEEe--------eecCCcce-eeee
Q 019562          168 RYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSN---CIQSCKACWGRGGVLKT--------QRTPFGLI-SQVS  235 (339)
Q Consensus       168 ~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G~~~~~--------~~~~~g~~-~~~~  235 (339)
                      .+++.|+|+|+++|.++++.+.+.+.|..|+|+|...+.   ...+|+.|+|+......        +..-.|.+ +...
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~  247 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS  247 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence            357888999999999999999999999999999998876   57899999999421110        00111222 2236


Q ss_pred             cCCCCCCccE
Q 019562          236 TCSKCGGDGK  245 (339)
Q Consensus       236 ~C~~C~G~G~  245 (339)
                      .|..|+..+.
T Consensus       248 ~C~~CH~~~~  257 (669)
T 3pmq_A          248 NCQTCHADNP  257 (669)
T ss_dssp             CCTTTSCCCT
T ss_pred             cchhhcCCcc
Confidence            7999998764

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.38  E-value=2.1e-05  Score=53.60  Aligned_cols=38  Identities=32%  Similarity=0.594  Sum_probs=25.5

Q ss_pred             eeeCCCCCCCCccCCCCcccCCCCCCccEEEEee-ecCCcce
Q 019562          191 FETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQ-RTPFGLI  231 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-~~~~g~~  231 (339)
                      ...|+.|+|+|...   ..+|+.|+|+|+++..+ +..++++
T Consensus         9 ~~~C~~C~GsG~~~---~~~C~~C~G~G~v~~~qG~~~~g~~   47 (53)
T 2bx9_A            9 EVACPKCERAGEIE---GTPCPACSGKGVILTAQGYTLLDFI   47 (53)
T ss_dssp             EEECTTTTTSSEET---TEECTTTTTSSEEECHHHHHHHHHH
T ss_pred             cccCCCCcceeccC---CCCCccCCCCccEEEEecccHHHHH
Confidence            35788888888764   36788888888776655 4444443

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.27  E-value=7.2e-05  Score=50.87  Aligned_cols=28  Identities=32%  Similarity=0.882  Sum_probs=20.0

Q ss_pred             ecCCCCCCccEEEeecccccCCceEEee
Q 019562          235 STCSKCGGDGKIIIDHCRRCGGNGEVQS  262 (339)
Q Consensus       235 ~~C~~C~G~G~~~~~~C~~C~g~g~~~~  262 (339)
                      .+|+.|+|+|.++.++|+.|.|.|.+..
T Consensus        10 ~~C~~C~GsG~~i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A           10 TTCPNCNGSGREEPEPCPKCLGKGVILT   37 (53)
T ss_dssp             EECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred             ccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence            5677777777777777777777776554

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.13  E-value=0.00013  Score=49.55  Aligned_cols=13  Identities=46%  Similarity=1.058  Sum_probs=7.3

Q ss_pred             ecCCCCCCccEEE
Q 019562          235 STCSKCGGDGKII  247 (339)
Q Consensus       235 ~~C~~C~G~G~~~  247 (339)
                      .+|+.|+|+|.+.
T Consensus        24 ~~C~~C~G~G~v~   36 (53)
T 3lcz_A           24 EPCPKCLGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEEE
T ss_pred             CcCCCCCCcEEEE
Confidence            4566666666554

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.90  E-value=0.00029  Score=47.88  Aligned_cols=28  Identities=29%  Similarity=0.736  Sum_probs=17.2

Q ss_pred             cccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEE
Q 019562          208 IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII  247 (339)
Q Consensus       208 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  247 (339)
                      ..+|+.|+|+|.++.            .+|+.|+|.|.++
T Consensus         9 ~~~C~~C~GsG~~~~------------~~C~~C~G~G~v~   36 (53)
T 2bx9_A            9 EVACPKCERAGEIEG------------TPCPACSGKGVIL   36 (53)
T ss_dssp             EEECTTTTTSSEETT------------EECTTTTTSSEEE
T ss_pred             cccCCCCcceeccCC------------CCCccCCCCccEE
Confidence            346777777776521            4566666666654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=90.35  E-value=0.14  Score=52.18  Aligned_cols=51  Identities=16%  Similarity=0.185  Sum_probs=40.2

Q ss_pred             cccccccCcccccccCCCCCH--HHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhh
Q 019562           38 MIRAAGTDYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEV   95 (339)
Q Consensus        38 ~~~~~~~d~y~iLgv~~~a~~--~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~v   95 (339)
                      +......|||.+||++.++..  .+|++|||+||+..+++       .+++..+..|+.|
T Consensus       623 ~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          623 WLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV  675 (681)
T ss_dssp             HHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred             HHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence            445567789999999776544  66999999999965543       5789999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	2e-21
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	9e-21
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-17
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	6e-17
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	9e-17
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	9e-16
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-15
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	2e-14
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	2e-13
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-12
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	3e-12
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	4e-09

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 84.3 bits (208), Expect = 2e-21
 Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 42  AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-PGAEEKFKEISSAYEVLSDDE 100
           A  DYY  L V + A  +EI+ +Y++LA KYHPD N+    AE KFKEI  AYEVL+D +
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 101 KRSVYDRFGEAGI 113
           KR+ YD++G A  
Sbjct: 61  KRAAYDQYGHAAF 73

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 9e-21
 Identities = 43/74 (58%), Positives = 56/74 (75%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKR 102
           G DYY TL + + A+ +EIK +YR+ A +YHPD NK PGAEEKFKEI+ AY+VLSD  KR
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61

Query: 103 SVYDRFGEAGITGE 116
            ++DR+GE G+ G 
Sbjct: 62  EIFDRYGEEGLKGS 75

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.2 bits (182), Expect = 2e-17
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 43  GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGA----EEKFKEISSAYEVLSD 98
           G   +  + +    T +++K  YRK     HPD           +  F E++ A+    +
Sbjct: 32  GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 99  DEKRSVY 105
             ++ +Y
Sbjct: 92  QGQKPLY 98

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.8 bits (178), Expect = 6e-17
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 29  GNNRSHRRGMIRAAGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEK--- 85
           G++ S    + +    D+YS L    +A + ++K  Y+KL   YHPD   +         
Sbjct: 1   GSSGSSGMALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEE 60

Query: 86  ----FKEISSAYEVLSDDEKRSVYDRFGEAGITG 115
               F EI  A+++L ++E +  YD       +G
Sbjct: 61  CMQKFIEIDQAWKILGNEETKKKYDLQRSGPSSG 94

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 72.0 bits (176), Expect = 9e-17
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 45  DYYSTLNVRQNATL--QEIKTSYRKLARKYHPDINKSPGAEEK------FKEISSAYEVL 96
           DY++   +     L  Q +   ++ L R+YHPD   S    E+         I+ A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 97  SDDEKRSVYD 106
                R+ Y 
Sbjct: 62  RHPLMRAEYL 71

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 69.3 bits (169), Expect = 9e-16
 Identities = 12/76 (15%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 36  RGMIRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAY 93
           R + RA        L + +        ++ +Y++ +   HPD     G+    +E++S +
Sbjct: 3   RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLW 59

Query: 94  EVLSDDEKRSVYDRFG 109
                +      +  G
Sbjct: 60  GTFKTEVYNLRMNLGG 75

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 2e-15
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 45  DYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKR 102
           +  S +         E K   R+L  K+HPD N      A E FK + +    L   EK+
Sbjct: 17  EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 103 SVYDRFGEAG 112
           +  D+  +  
Sbjct: 74  AFLDQNADRA 83

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 65.5 bits (159), Expect = 2e-14
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 4/81 (4%)

Query: 181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKC 240
           G  + I +   E CD C G+GAK     Q+C  C G        +   G  +   TC  C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGS----GQVQMRQGFFAVQQTCPHC 56

Query: 241 GGDGKIIIDHCRRCGGNGEVQ 261
            G G +I D C +C G+G V+
Sbjct: 57  QGRGTLIKDPCNKCHGHGRVE 77

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.4 bits (151), Expect = 2e-13
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 193 TCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DH 250
            C  C G G K    ++ C +C G+G    T++    +    + C  C G G II   D 
Sbjct: 4   LCKECEGRGGKK-GAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDR 62

Query: 251 CRRCGGNGEVQ 261
           C+ C G     
Sbjct: 63  CKSCNGKKVEN 73

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 61.7 bits (149), Expect = 1e-12
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 39  IRAAGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVL 96
           +R         L + ++A   +  ++ +Y K  +++HPD        EK K++++ Y+ +
Sbjct: 3   MREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKM 59

Query: 97  SDDEKRSVYDRFGEAGITGEYDGLSNTSQGVDPFELYSAFFGGSD 141
            D  K +    FG       +D     + G D +E +   F   +
Sbjct: 60  EDGVKYAHQPDFGG-----FWDATEIPTYGTDEWEQWWNAFNEEN 99

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 59.8 bits (144), Expect = 3e-12
 Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 3/75 (4%)

Query: 192 ETCDSCGGTGAKSSNCI---QSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII 248
             C+SC   G  S++       C++C G+   +     P       + C           
Sbjct: 12  GGCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQK 71

Query: 249 DHCRRCGGNGEVQSK 263
             C  C  +G   + 
Sbjct: 72  PTCESCHDDGRTSAS 86

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (121), Expect = 4e-09
 Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 240 CGGDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLF 299
             G  K      +   G  E   K  + + + PG   G  +  + +G+++ +      L 
Sbjct: 15  FVGKKKSFKIGRKGPHGASE---KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71

Query: 300 VALHVDE 306
             +    
Sbjct: 72  FVIQEKS 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.9
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.89
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.8
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.79
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.69
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.68
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.65
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.64
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.64
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.62
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.54
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.43
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.23
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.12
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	98.01
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.75
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	97.74
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	97.72
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	96.52
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	94.07

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.9e-24  Score=158.28  Aligned_cols=72  Identities=50%  Similarity=0.861  Sum_probs=67.1

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINK-SPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~-~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      .+|||+||||+++||.+|||+|||+|+++||||+++ ++.+.++|++|++||+||+||.+|+.||+||..+++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            479999999999999999999999999999999987 466788999999999999999999999999987653

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.3e-24  Score=157.74  Aligned_cols=73  Identities=58%  Similarity=1.008  Sum_probs=69.9

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccCcC
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAGIT  114 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g~~  114 (339)
                      |.+|||+||||+++||.+||++||++|++++|||++.++.+.++|+.|++||+||+||.+|+.||++|+++++
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~   73 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK   73 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhc
Confidence            3579999999999999999999999999999999999899999999999999999999999999999999875

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1e-20  Score=145.03  Aligned_cols=69  Identities=32%  Similarity=0.580  Sum_probs=62.4

Q ss_pred             cccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC-------cchHHHHHHHHHHHhhccCchhhhhhhcccc
Q 019562           42 AGTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS-------PGAEEKFKEISSAYEVLSDDEKRSVYDRFGE  110 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-------~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~  110 (339)
                      +.+|||+||||+++|+.+|||+||++|+++||||+++.       +.++++|+.|++||+||+||.+|+.||....
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~   89 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence            35799999999999999999999999999999999863       2377889999999999999999999998643

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.79  E-value=6.1e-21  Score=151.67  Aligned_cols=67  Identities=22%  Similarity=0.413  Sum_probs=61.4

Q ss_pred             ccCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhcccccC
Q 019562           43 GTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFGEAG  112 (339)
Q Consensus        43 ~~d~y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~g  112 (339)
                      ..|||+||||+++|  +.++||+|||+||+++|||+++++   ++|++|++||+||+|+.+|+.||.+|...
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~---e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT---TTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH---HHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            46899999999999  788999999999999999998654   58999999999999999999999988654

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.69  E-value=2.6e-18  Score=126.56  Aligned_cols=65  Identities=12%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             cccCcccccccCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHhhccCchhhhhhhccc
Q 019562           42 AGTDYYSTLNVRQNA--TLQEIKTSYRKLARKYHPDINKSPGAEEKFKEISSAYEVLSDDEKRSVYDRFG  109 (339)
Q Consensus        42 ~~~d~y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G  109 (339)
                      ...+||+||||++++  +.++||+|||+|+++||||++.   ..++|++|++||++|+|+.+|..||..+
T Consensus         9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g---~~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_           9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG---SHALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC---CHHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC---CHHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            357899999999987  9999999999999999999974   4579999999999999999999999744

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=8e-18  Score=123.71  Aligned_cols=64  Identities=25%  Similarity=0.415  Sum_probs=56.6

Q ss_pred             cCcccccccCCC--CCHHHHHHHHHHHHHHhCCCCCCCc------chHHHHHHHHHHHhhccCchhhhhhhc
Q 019562           44 TDYYSTLNVRQN--ATLQEIKTSYRKLARKYHPDINKSP------GAEEKFKEISSAYEVLSDDEKRSVYDR  107 (339)
Q Consensus        44 ~d~y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~------~~~~~f~~i~~Ay~vL~d~~~r~~yd~  107 (339)
                      .|||++|||++.  ++.+|||+||++++++||||+....      .+.+.|+.|++||+||+||.+|+.|+.
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            489999999996  4589999999999999999997532      266889999999999999999999974

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=1.7e-16  Score=117.65  Aligned_cols=80  Identities=14%  Similarity=0.347  Sum_probs=66.9

Q ss_pred             cceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCcc
Q 019562          165 LDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDG  244 (339)
Q Consensus       165 ~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  244 (339)
                      ++|+++|.|||||+|+|+++++.+.+.    .|+                 |.+                          
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~----~~~-----------------g~~--------------------------   33 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRK----GPH-----------------GAS--------------------------   33 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE----ETT-----------------TEE--------------------------
T ss_pred             CCEEEEeEEEHHHHhCCCceEeeccee----ccc-----------------CCC--------------------------
Confidence            478999999999999999999987642    111                 111                          


Q ss_pred             EEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCC
Q 019562          245 KIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (339)
Q Consensus       245 ~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~  308 (339)
                                       +.+.++|.||||+++|++|+|+|+|++..+++.+|||+|+|++++||
T Consensus        34 -----------------~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          34 -----------------EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             -----------------EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             -----------------ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                             24568999999999999999999999877677899999999999996

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=3.2e-16  Score=114.35  Aligned_cols=73  Identities=21%  Similarity=0.435  Sum_probs=65.1

Q ss_pred             CCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCC
Q 019562          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (339)
Q Consensus       162 ~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (339)
                      +++.|+.++|.|||+|||+|+++++.+.                                                    
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~----------------------------------------------------   29 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALN----------------------------------------------------   29 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEE----------------------------------------------------
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeec----------------------------------------------------
Confidence            4688999999999999999999987653                                                    


Q ss_pred             CccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCC
Q 019562          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (339)
Q Consensus       242 G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~  308 (339)
                                           .+.++|+||+|+++|++|+|+|+|++.. ++.+|||+|+|++++|+
T Consensus        30 ---------------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~-~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 ---------------------RKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             ---------------------EEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCS
T ss_pred             ---------------------CccEEEEecccccCCeEEEecCCcCCCC-CCCCCCEEEEEEecCCC
Confidence                                 2468899999999999999999999865 67899999999999985

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.6e-17  Score=122.94  Aligned_cols=66  Identities=26%  Similarity=0.289  Sum_probs=58.3

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCC--cchHHHHHHHHHHHhhccCchhhhhhhccccc
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKS--PGAEEKFKEISSAYEVLSDDEKRSVYDRFGEA  111 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~--~~~~~~f~~i~~Ay~vL~d~~~r~~yd~~G~~  111 (339)
                      -+|+|+||+|+.+||.+|||+|||+|+++||||+++.  ..+.++|+.|++||++|+   +++.||++...
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~~   82 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNADR   82 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSSC
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccchH
Confidence            3799999999999999999999999999999999874  357899999999999996   56777876654

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.62  E-value=4.8e-17  Score=125.03  Aligned_cols=63  Identities=22%  Similarity=0.422  Sum_probs=57.8

Q ss_pred             ccCcccccccCCCCCHHHHHHHHHHHHHHhCCCCCCCcc----hHHHHHHHHHHHhhccCchhhhhh
Q 019562           43 GTDYYSTLNVRQNATLQEIKTSYRKLARKYHPDINKSPG----AEEKFKEISSAYEVLSDDEKRSVY  105 (339)
Q Consensus        43 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~f~~i~~Ay~vL~d~~~r~~y  105 (339)
                      ..+.|++|||+..+|.++||+|||++++++|||+++++.    +.+.|+.|++||++|+||.+|+.|
T Consensus        32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            357899999999999999999999999999999987543    678999999999999999999987

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=1.7e-15  Score=111.79  Aligned_cols=78  Identities=37%  Similarity=0.833  Sum_probs=68.2

Q ss_pred             ccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEE
Q 019562          181 GGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEV  260 (339)
Q Consensus       181 G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~  260 (339)
                      |.+++|.+++.+.|+.|+|+|.........|+.|+|+|++...    .+++++.++|+.|+|+|+++.++|..|.|.|++
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~----~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v   76 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMR----QGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRV   76 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEE----ETTEEEEEECTTTTTSSEECSSBCGGGTTSSEE
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEEe----cccceeeEECcccCcceeECCCCCCCCCCceEe
Confidence            5677889999999999999999988888999999999986432    356666689999999999999999999999987


Q ss_pred             ee
Q 019562          261 QS  262 (339)
Q Consensus       261 ~~  262 (339)
                      ..
T Consensus        77 ~k   78 (79)
T d1exka_          77 ER   78 (79)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=8.6e-14  Score=101.10  Aligned_cols=72  Identities=28%  Similarity=0.609  Sum_probs=62.1

Q ss_pred             eeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe--ecccccCCceEEee
Q 019562          190 CFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII--DHCRRCGGNGEVQS  262 (339)
Q Consensus       190 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~--~~C~~C~g~g~~~~  262 (339)
                      |.+.|+.|+|+|..... ..+|+.|+|+|+++...++.++++++..+|+.|+|+|+++.  ++|+.|.|.+++.+
T Consensus         1 r~v~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCC-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            46899999999998764 57899999999999888888877666789999999998864  68999999997753

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.23  E-value=2.3e-12  Score=97.08  Aligned_cols=84  Identities=26%  Similarity=0.328  Sum_probs=70.5

Q ss_pred             CCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCC
Q 019562          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (339)
Q Consensus       162 ~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (339)
                      ++|.|+.+++.|+|.||+.|+++.+...                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4688999999999999999999887532                                                    


Q ss_pred             CccEEEeecccccCCceEEeeceEEEEEeCCCCCCCCEEEEccCCCCCCCC-CCCcCEEEEEEEecCCCccccccce
Q 019562          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPGVSNGATMQIRGEGNFDRRR-SLAGDLFVALHVDEKQGIHRDGLNL  317 (339)
Q Consensus       242 G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G~~~G~~i~l~g~G~~~~~~-~~~GDLiv~i~v~~~~~f~R~g~dL  317 (339)
                                          ..+.++|+||+|+++|++++++|+|++...+ +.+|||+|+|+|+.|..+..++.++
T Consensus        32 --------------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls~~qk~~   88 (90)
T d1c3ga2          32 --------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRA   88 (90)
T ss_dssp             --------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHH
T ss_pred             --------------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCCHHHHHh
Confidence                                1246789999999999999999999986533 5689999999999998888776554

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=2.4e-11  Score=89.29  Aligned_cols=75  Identities=25%  Similarity=0.396  Sum_probs=63.2

Q ss_pred             CCCcceEEEEeeceeeeecccEEEEEEeeeeeCCCCCCCCccCCCCcccCCCCCCccEEEEeeecCCcceeeeecCCCCC
Q 019562          162 NFGLDIRYDLHLSFEESIFGGQRGIEVSCFETCDSCGGTGAKSSNCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCG  241 (339)
Q Consensus       162 ~~g~di~~~l~lslee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  241 (339)
                      +.|.|+.+++.|+|.||+.|+++.+...                                                    
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------   31 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS----------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec----------------------------------------------------
Confidence            4688999999999999999998777432                                                    


Q ss_pred             CccEEEeecccccCCceEEeeceEEEEEeCCC--CCCCCEEEEccCCCCCCCCCCCcCEEEEEEEecCC
Q 019562          242 GDGKIIIDHCRRCGGNGEVQSKRSMKVVIPPG--VSNGATMQIRGEGNFDRRRSLAGDLFVALHVDEKQ  308 (339)
Q Consensus       242 G~G~~~~~~C~~C~g~g~~~~~~~l~v~Ip~G--~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~  308 (339)
                                          ....++|.||++  +++|++++++|+|++..+++.+|||+|+++|+.|+
T Consensus        32 --------------------dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~Pk   80 (80)
T d1nlta2          32 --------------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE   80 (80)
T ss_dssp             --------------------SSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC
T ss_pred             --------------------CcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcCC
Confidence                                124567788877  99999999999999987777899999999998774

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=98.01  E-value=7.7e-07  Score=64.35  Aligned_cols=46  Identities=37%  Similarity=0.873  Sum_probs=37.2

Q ss_pred             eeeCCCCCCCCccCC-----CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEe
Q 019562          191 FETCDSCGGTGAKSS-----NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIII  248 (339)
Q Consensus       191 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~  248 (339)
                      ...|+.|+|+|....     ..+.+|+.|+|+|+++.            .+|+.|+|+|++.+
T Consensus        28 ~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~------------~~C~~C~G~G~v~k   78 (79)
T d1exka_          28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK------------DPCNKCHGHGRVER   78 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS------------SBCGGGTTSSEEEC
T ss_pred             ceeCCCccceeEEEEecccceeeEECcccCcceeECC------------CCCCCCCCceEeec
Confidence            357999999997522     23578999999999754            68999999998864

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.75  E-value=2.6e-06  Score=60.67  Aligned_cols=46  Identities=28%  Similarity=0.747  Sum_probs=35.5

Q ss_pred             eeCCCCCCCCccCC---------CCcccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEE
Q 019562          192 ETCDSCGGTGAKSS---------NCIQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKII  247 (339)
Q Consensus       192 ~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~  247 (339)
                      ..|+.|+|+|....         ....+|+.|+|+|+++...          .+|+.|+|.|++.
T Consensus        19 ~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~----------~~C~~C~G~g~v~   73 (74)
T d1nlta3          19 KKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPK----------DRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTT----------SBCSSSTTSCEEE
T ss_pred             CCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCC----------CCCCCCCCeeEeC
Confidence            46999999998532         2357899999999865421          5899999999775

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.74  E-value=3.1e-06  Score=61.13  Aligned_cols=30  Identities=27%  Similarity=0.409  Sum_probs=28.1

Q ss_pred             CccccccceeEecccChhhhhcCCeEEeec
Q 019562          309 GIHRDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       309 ~f~R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      .|+|+|+||+++++|+++|||+|++++|+.
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~   30 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEH   30 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEEC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEe
Confidence            489999999999999999999999999873

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.72  E-value=4.7e-06  Score=61.56  Aligned_cols=29  Identities=28%  Similarity=0.562  Sum_probs=27.8

Q ss_pred             CccccccceeEecccChhhhhcCCeEEee
Q 019562          309 GIHRDGLNLFSKISVDYTEAILGTSMEVG  337 (339)
Q Consensus       309 ~f~R~g~dL~~~~~I~l~eAllG~~~~V~  337 (339)
                      .|+|+|+||+++++|+++||++|++++|+
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~   29 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQ   29 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEE
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEe
Confidence            48999999999999999999999999997

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=96.52  E-value=2.2e-05  Score=57.67  Aligned_cols=69  Identities=19%  Similarity=0.444  Sum_probs=52.0

Q ss_pred             eCCCCCCCCccCCCC---cccCCCCCCccEEEEeeecCCcceeeeecCCCCCCccEEEeecccccCCceEEe
Q 019562          193 TCDSCGGTGAKSSNC---IQSCKACWGRGGVLKTQRTPFGLISQVSTCSKCGGDGKIIIDHCRRCGGNGEVQ  261 (339)
Q Consensus       193 ~C~~C~G~G~~~~~~---~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~g~g~~~  261 (339)
                      .|..|+|.|......   ...|..|+|+|.........++....-..|..|.|.++.+.+.|..|.+.+++.
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~~~~C~~CH~~gr~~   84 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPTCESCHDDGRTS   84 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTCCCCSTTTCSSCCCH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCccccccCccccCCCCcCCCccccccCCCccc
Confidence            699999998754433   367999999997655444444444444789999999999999999999987543

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.07  E-value=0.0088  Score=41.53  Aligned_cols=27  Identities=19%  Similarity=0.315  Sum_probs=24.8

Q ss_pred             ccccceeEecccChhhhhcCCeEEeec
Q 019562          312 RDGLNLFSKISVDYTEAILGTSMEVGY  338 (339)
Q Consensus       312 R~g~dL~~~~~I~l~eAllG~~~~V~~  338 (339)
                      |+|.|+++++.|||.||++|+++.|..
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~   28 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLAL   28 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEE
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceee
Confidence            689999999999999999999988764