Citrus Sinensis ID: 019572

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MSAMIGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
cccccccccHHHHHHHccccccHHHHHccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHcccccccccccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHHHHccccccEEEEEEccccHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccHHHHHHHHHHcccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHccc
ccHHHHHHHHHHHHHHcHccccHHHHHccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHccccccccccccccHccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEEcccccccHHcccccccccHHHHHHHccccccEEEEEEEcccHHHHHHHHcccEEEEEccHcccHHHHHHHHHHHccccEEEEEEEHHHEcccccccccccccccEcHHHHHHHHHHHcccEEEcEEEEEcccccccccHHHHHHHHHHHHHHHHccc
msamigkrgVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAvastsllgvplghnssflqgpafapprireaiwcgstnstteegkelndprvltdvgdvpvqeirdcgvdddrlMNVITESVKLvmeedplhplvlggdhsisfPVIRAVSeklggpvdvlhldahpdiydafegnkyshasSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLEnlklgegvkGVYISVdvdcldpafapgvshiepgglsFRDVLNILHNLQADVVAADvvefnpqrdtvDGMTAMVAAKLVRELTAKISK
msamigkrGVHYLQKLKSANIpiaviekgqnrvIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGStnstteegkelndprvltdvgdvpvqeirdcgvdddrlMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSitkegreqgkrfgveqyemrtfsRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
MSAMIGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
*******RGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGS**************RVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKE*****KRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVR********
**********************************DASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
MSAMIGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS********NDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
*SAMIGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
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MSAMIGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query339 2.2.26 [Sep-21-2011]
P46637342 Arginase OS=Arabidopsis t yes no 1.0 0.991 0.888 1e-178
Q9ZPF5344 Probable arginase OS=Arab no no 0.988 0.973 0.824 1e-166
O49046350 Arginase OS=Glycine max G no no 0.988 0.957 0.731 1e-148
Q9BSE5352 Agmatinase, mitochondrial yes no 0.772 0.744 0.331 5e-29
Q814Q2290 Agmatinase OS=Bacillus ce yes no 0.755 0.882 0.311 1e-28
Q81JT1290 Agmatinase OS=Bacillus an no no 0.755 0.882 0.315 4e-28
Q90XD2340 Agmatinase, mitochondrial yes no 0.743 0.741 0.340 1e-26
Q57757284 Uncharacterized protein M yes no 0.758 0.904 0.292 4e-26
Q9KBE3319 Formimidoylglutamase OS=B yes no 0.864 0.918 0.323 7e-26
P70999290 Agmatinase OS=Bacillus su yes no 0.766 0.896 0.303 1e-25
>sp|P46637|ARGI1_ARATH Arginase OS=Arabidopsis thaliana GN=At4g08900 PE=2 SV=1 Back     alignment and function desciption
 Score =  625 bits (1613), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 304/342 (88%), Positives = 322/342 (94%), Gaps = 3/342 (0%)

Query: 1   MSAMIGKRGVHYLQKLKSAN---IPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGG 57
           MS +IG++G++Y+ +L SA+   +  + IEKGQNRVIDASLTLIRERAKLKGELVR LGG
Sbjct: 1   MSRIIGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGG 60

Query: 58  AVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDV 117
           A ASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS TEEGKEL DPRVLTDVGDV
Sbjct: 61  AKASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSATEEGKELKDPRVLTDVGDV 120

Query: 118 PVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVD 177
           PVQEIRDCGVDDDRLMNVI+ESVKLVMEE+PL PLVLGGDHSIS+PV+RAVSEKLGGPVD
Sbjct: 121 PVQEIRDCGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVRAVSEKLGGPVD 180

Query: 178 VLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQ 237
           +LHLDAHPDIYD FEGNKYSHASSFARIMEGGYARRLLQVGIRSI +EGREQGKRFGVEQ
Sbjct: 181 ILHLDAHPDIYDCFEGNKYSHASSFARIMEGGYARRLLQVGIRSINQEGREQGKRFGVEQ 240

Query: 238 YEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILH 297
           YEMRTFS+DR  LENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGGLSFRDVLNILH
Sbjct: 241 YEMRTFSKDRPMLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILH 300

Query: 298 NLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
           NLQADVV ADVVEFNPQRDTVDGMTAMVAAKLVREL AKISK
Sbjct: 301 NLQADVVGADVVEFNPQRDTVDGMTAMVAAKLVRELAAKISK 342

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 3EC: .EC: 1
>sp|Q9ZPF5|ARGI2_ARATH Probable arginase OS=Arabidopsis thaliana GN=At4g08870 PE=1 SV=1 Back     alignment and function description
>sp|O49046|ARGI_SOYBN Arginase OS=Glycine max GN=AG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9BSE5|SPEB_HUMAN Agmatinase, mitochondrial OS=Homo sapiens GN=AGMAT PE=1 SV=2 Back     alignment and function description
>sp|Q814Q2|SPEB_BACCR Agmatinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=speB PE=3 SV=1 Back     alignment and function description
>sp|Q81JT1|SPEB_BACAN Agmatinase OS=Bacillus anthracis GN=speB PE=3 SV=1 Back     alignment and function description
>sp|Q90XD2|SPEB_CHICK Agmatinase, mitochondrial OS=Gallus gallus GN=AGMAT PE=2 SV=1 Back     alignment and function description
>sp|Q57757|Y309_METJA Uncharacterized protein MJ0309 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0309 PE=3 SV=1 Back     alignment and function description
>sp|Q9KBE3|HUTG_BACHD Formimidoylglutamase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=hutG PE=3 SV=1 Back     alignment and function description
>sp|P70999|SPEB_BACSU Agmatinase OS=Bacillus subtilis (strain 168) GN=speB PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query339
255541244338 arginase, putative [Ricinus communis] gi 0.994 0.997 0.940 0.0
118489295338 unknown [Populus trichocarpa x Populus d 0.994 0.997 0.931 0.0
224063758338 predicted protein [Populus trichocarpa] 0.994 0.997 0.928 0.0
224127346333 predicted protein [Populus trichocarpa] 0.979 0.996 0.930 0.0
148828535338 arginase [Malus hupehensis] 0.994 0.997 0.910 0.0
296089193371 unnamed protein product [Vitis vinifera] 0.988 0.902 0.907 1e-180
350538013338 arginase 1 [Solanum lycopersicum] gi|546 0.985 0.988 0.904 1e-179
297813247342 arginase [Arabidopsis lyrata subsp. lyra 1.0 0.991 0.891 1e-177
15236640342 arginase [Arabidopsis thaliana] gi|11684 1.0 0.991 0.888 1e-177
388505218338 unknown [Lotus japonicus] 0.994 0.997 0.884 1e-175
>gi|255541244|ref|XP_002511686.1| arginase, putative [Ricinus communis] gi|223548866|gb|EEF50355.1| arginase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/337 (94%), Positives = 330/337 (97%)

Query: 3   AMIGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVAST 62
            +IG+RG+HYLQKLK+ANIP  +IEKGQNRVIDASLTLIRERAKLKGELVRALGGA AS+
Sbjct: 2   TVIGRRGIHYLQKLKAANIPAELIEKGQNRVIDASLTLIRERAKLKGELVRALGGAKASS 61

Query: 63  SLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEI 122
           SLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEI
Sbjct: 62  SLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEI 121

Query: 123 RDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLD 182
           RDC VDDDRLMNVI+ESVKLVMEEDPL PLVLGGDHSISFPV+RAVSEKLGGPVD+LHLD
Sbjct: 122 RDCSVDDDRLMNVISESVKLVMEEDPLRPLVLGGDHSISFPVVRAVSEKLGGPVDILHLD 181

Query: 183 AHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRT 242
           AHPDIY AFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGK++GVEQ+EMRT
Sbjct: 182 AHPDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKKYGVEQFEMRT 241

Query: 243 FSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD 302
           FSRDRQFLENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD
Sbjct: 242 FSRDRQFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQAD 301

Query: 303 VVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
           VVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
Sbjct: 302 VVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118489295|gb|ABK96452.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|224063758|ref|XP_002301277.1| predicted protein [Populus trichocarpa] gi|222843003|gb|EEE80550.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224127346|ref|XP_002320051.1| predicted protein [Populus trichocarpa] gi|222860824|gb|EEE98366.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|148828535|gb|ABR13881.1| arginase [Malus hupehensis] Back     alignment and taxonomy information
>gi|296089193|emb|CBI38896.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|350538013|ref|NP_001234578.1| arginase 1 [Solanum lycopersicum] gi|54648780|gb|AAV36808.1| arginase 1 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|297813247|ref|XP_002874507.1| arginase [Arabidopsis lyrata subsp. lyrata] gi|297320344|gb|EFH50766.1| arginase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15236640|ref|NP_192629.1| arginase [Arabidopsis thaliana] gi|1168493|sp|P46637.1|ARGI1_ARATH RecName: Full=Arginase gi|602422|gb|AAA85816.1| arginase [Arabidopsis thaliana] gi|4325373|gb|AAD17369.1| Arabidopsis thaliana arginase (SW:P46637) (Pfam: PF00491, Score=419.6, E=3.7e-142 N=1) [Arabidopsis thaliana] gi|7267532|emb|CAB78014.1| arginase [Arabidopsis thaliana] gi|15450351|gb|AAK96469.1| AT4g08900/T3H13_7 [Arabidopsis thaliana] gi|16974475|gb|AAL31241.1| AT4g08900/T3H13_7 [Arabidopsis thaliana] gi|332657294|gb|AEE82694.1| arginase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388505218|gb|AFK40675.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query339
TAIR|locus:2138718342 ARGAH1 "arginine amidohydrolas 1.0 0.991 0.888 1.1e-160
TAIR|locus:2138743344 ARGAH2 "arginine amidohydrolas 0.988 0.973 0.824 1.1e-149
TIGR_CMR|BA_3709323 BA_3709 "formiminoglutamase" [ 0.846 0.888 0.338 5.4e-31
TIGR_CMR|SPO_2464315 SPO_2464 "agmatinase" [Ruegeri 0.793 0.853 0.311 6.9e-31
UNIPROTKB|Q9BSE5352 AGMAT "Agmatinase, mitochondri 0.778 0.75 0.340 1.1e-30
TIGR_CMR|BA_5617290 BA_5617 "agmatinase, putative" 0.755 0.882 0.315 1.8e-30
UNIPROTKB|F1SUU6361 AGMAT "Uncharacterized protein 0.778 0.731 0.343 3e-30
UNIPROTKB|E1BLC0361 AGMAT "Uncharacterized protein 0.778 0.731 0.350 2.7e-29
UNIPROTKB|E2QVZ9352 AGMAT "Uncharacterized protein 0.778 0.75 0.343 3.4e-29
TIGR_CMR|CHY_1620287 CHY_1620 "putative agmatinase" 0.758 0.895 0.329 9.1e-29
TAIR|locus:2138718 ARGAH1 "arginine amidohydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1565 (556.0 bits), Expect = 1.1e-160, P = 1.1e-160
 Identities = 304/342 (88%), Positives = 322/342 (94%)

Query:     1 MSAMIGKRGVHYLQKLKSAN---IPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGG 57
             MS +IG++G++Y+ +L SA+   +  + IEKGQNRVIDASLTLIRERAKLKGELVR LGG
Sbjct:     1 MSRIIGRKGINYIHRLNSASFTSVSASSIEKGQNRVIDASLTLIRERAKLKGELVRLLGG 60

Query:    58 AVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDV 117
             A ASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS TEEGKEL DPRVLTDVGDV
Sbjct:    61 AKASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSATEEGKELKDPRVLTDVGDV 120

Query:   118 PVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVD 177
             PVQEIRDCGVDDDRLMNVI+ESVKLVMEE+PL PLVLGGDHSIS+PV+RAVSEKLGGPVD
Sbjct:   121 PVQEIRDCGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVRAVSEKLGGPVD 180

Query:   178 VLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQ 237
             +LHLDAHPDIYD FEGNKYSHASSFARIMEGGYARRLLQVGIRSI +EGREQGKRFGVEQ
Sbjct:   181 ILHLDAHPDIYDCFEGNKYSHASSFARIMEGGYARRLLQVGIRSINQEGREQGKRFGVEQ 240

Query:   238 YEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILH 297
             YEMRTFS+DR  LENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGGLSFRDVLNILH
Sbjct:   241 YEMRTFSKDRPMLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILH 300

Query:   298 NLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
             NLQADVV ADVVEFNPQRDTVDGMTAMVAAKLVREL AKISK
Sbjct:   301 NLQADVVGADVVEFNPQRDTVDGMTAMVAAKLVRELAAKISK 342
GO:0005739 "mitochondrion" evidence=ISM
GO:0006595 "polyamine metabolic process" evidence=ISS
GO:0008783 "agmatinase activity" evidence=ISS
GO:0016813 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP
GO:0004053 "arginase activity" evidence=IGI;IMP
GO:0050897 "cobalt ion binding" evidence=IDA
GO:0006527 "arginine catabolic process" evidence=IGI
TAIR|locus:2138743 ARGAH2 "arginine amidohydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3709 BA_3709 "formiminoglutamase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2464 SPO_2464 "agmatinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BSE5 AGMAT "Agmatinase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5617 BA_5617 "agmatinase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|F1SUU6 AGMAT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BLC0 AGMAT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVZ9 AGMAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1620 CHY_1620 "putative agmatinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZPF5ARGI2_ARATH3, ., 5, ., 3, ., 10.82400.98820.9738nono
P46637ARGI1_ARATH3, ., 5, ., 3, ., 10.88881.00.9912yesno
O49046ARGI_SOYBN3, ., 5, ., 3, ., 10.73130.98820.9571nono
Q9KBE3HUTG_BACHD3, ., 5, ., 3, ., 80.32380.86430.9184yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.3.80.824
3rd Layer3.5.3.10.994
3rd Layer3.5.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00021348
arginase (EC-3.5.3.1) (338 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_IV0804
arginine decarboxylase (EC-4.1.1.19) (731 aa)
•    •• 0.980
gw1.V.1402.1
SubName- Full=Putative uncharacterized protein; (326 aa)
   • •• 0.965
estExt_fgenesh4_pm.C_LG_II0485
argininosuccinate lyase (EC-4.3.2.1) (461 aa)
     •• 0.943
gw1.VIII.1783.1
urease (EC-3.5.1.5) (837 aa)
     •• 0.932
gw1.XI.2500.1
ornithine-delta-aminotransferase (EC-2.6.1.13) (379 aa)
     •• 0.911
estExt_Genewise1_v1.C_2320006
hypothetical protein (482 aa)
     •• 0.908
gw1.29.316.1
hypothetical protein (380 aa)
     •• 0.902
fgenesh4_pg.C_LG_II000144
hypothetical protein (381 aa)
     •• 0.900
gw1.V.1952.1
annotation not avaliable (202 aa)
     •  0.899
estExt_fgenesh4_pg.C_290192
hypothetical protein (436 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
PLN02615338 PLN02615, PLN02615, arginase 0.0
cd11593263 cd11593, Agmatinase-like_2, Agmatinase and related 1e-102
pfam00491268 pfam00491, Arginase, Arginase family 4e-83
cd09990275 cd09990, Agmatinase-like, Agmatinase-like family 3e-82
COG0010305 COG0010, SpeB, Arginase/agmatinase/formimionogluta 3e-59
cd11589274 cd11589, Agmatinase_like_1, Agmatinase and related 7e-52
cd11592289 cd11592, Agmatinase_PAH, Agmatinase-like family in 2e-51
TIGR01230275 TIGR01230, agmatinase, agmatinase 9e-46
cd09015270 cd09015, Ureohydrolase, Ureohydrolase superfamily 1e-35
PRK01722320 PRK01722, PRK01722, formimidoylglutamase; Provisio 2e-33
cd09987217 cd09987, Arginase_HDAC, Arginase-like and histone- 5e-33
cd09989290 cd09989, Arginase, Arginase family 4e-30
PRK02190301 PRK02190, PRK02190, agmatinase; Provisional 9e-29
cd09999272 cd09999, Arginase-like_1, Arginase-like amidino hy 8e-26
TIGR01227307 TIGR01227, hutG, formimidoylglutamase 1e-24
cd09988262 cd09988, Formimidoylglutamase, Formimidoylglutamas 4e-21
TIGR01229300 TIGR01229, rocF_arginase, arginase 3e-19
cd11587294 cd11587, Arginase-like, Arginase types I and II an 3e-16
PRK13773324 PRK13773, PRK13773, formimidoylglutamase; Provisio 4e-14
PRK13776318 PRK13776, PRK13776, formimidoylglutamase; Provisio 6e-13
PRK13772314 PRK13772, PRK13772, formimidoylglutamase; Provisio 4e-11
PRK13775328 PRK13775, PRK13775, formimidoylglutamase; Provisio 5e-09
PRK13774311 PRK13774, PRK13774, formimidoylglutamase; Provisio 2e-04
>gnl|CDD|178224 PLN02615, PLN02615, arginase Back     alignment and domain information 
 Score =  688 bits (1778), Expect = 0.0
 Identities = 307/335 (91%), Positives = 326/335 (97%)

Query: 5   IGKRGVHYLQKLKSANIPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSL 64
           IG+RG+HYLQ+L +A++P +++EKGQNRVIDASLTLIRERAKLKGELVRALGGA AS+ L
Sbjct: 4   IGRRGIHYLQRLIAASVPASLLEKGQNRVIDASLTLIRERAKLKGELVRALGGAKASSCL 63

Query: 65  LGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRD 124
           LGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRD
Sbjct: 64  LGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRD 123

Query: 125 CGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAH 184
           CGVDDDRLMNVI+ESVKLVMEE+PL PLVLGGDHSIS+PV+RAVSEKLGGPVD+LHLDAH
Sbjct: 124 CGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVRAVSEKLGGPVDILHLDAH 183

Query: 185 PDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFS 244
           PDIY AFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFS
Sbjct: 184 PDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFS 243

Query: 245 RDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVV 304
           +DR+ LENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQ DVV
Sbjct: 244 KDREKLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVV 303

Query: 305 AADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
            ADVVEFNPQRDTVDGMTAMVAAKLVRELTAK+SK
Sbjct: 304 GADVVEFNPQRDTVDGMTAMVAAKLVRELTAKMSK 338

Length = 338
>gnl|CDD|212539 cd11593, Agmatinase-like_2, Agmatinase and related proteins Back     alignment and domain information
>gnl|CDD|215946 pfam00491, Arginase, Arginase family Back     alignment and domain information
>gnl|CDD|212516 cd09990, Agmatinase-like, Agmatinase-like family Back     alignment and domain information
>gnl|CDD|223089 COG0010, SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|212537 cd11589, Agmatinase_like_1, Agmatinase and related proteins Back     alignment and domain information
>gnl|CDD|212538 cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase Back     alignment and domain information
>gnl|CDD|233323 TIGR01230, agmatinase, agmatinase Back     alignment and domain information
>gnl|CDD|212511 cd09015, Ureohydrolase, Ureohydrolase superfamily includes arginase, formiminoglutamase, agmatinase and proclavaminate amidinohydrolase (PAH) Back     alignment and domain information
>gnl|CDD|234974 PRK01722, PRK01722, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|212513 cd09987, Arginase_HDAC, Arginase-like and histone-like hydrolases Back     alignment and domain information
>gnl|CDD|212515 cd09989, Arginase, Arginase family Back     alignment and domain information
>gnl|CDD|235011 PRK02190, PRK02190, agmatinase; Provisional Back     alignment and domain information
>gnl|CDD|212523 cd09999, Arginase-like_1, Arginase-like amidino hydrolase family Back     alignment and domain information
>gnl|CDD|233322 TIGR01227, hutG, formimidoylglutamase Back     alignment and domain information
>gnl|CDD|212514 cd09988, Formimidoylglutamase, Formimidoylglutamase or HutE Back     alignment and domain information
>gnl|CDD|162262 TIGR01229, rocF_arginase, arginase Back     alignment and domain information
>gnl|CDD|212536 cd11587, Arginase-like, Arginase types I and II and arginase-like family Back     alignment and domain information
>gnl|CDD|237499 PRK13773, PRK13773, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|237500 PRK13776, PRK13776, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|172310 PRK13772, PRK13772, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|172313 PRK13775, PRK13775, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|184317 PRK13774, PRK13774, formimidoylglutamase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 339
KOG2964361 consensus Arginase family protein [Amino acid tran 100.0
PLN02615338 arginase 100.0
COG0010305 SpeB Arginase/agmatinase/formimionoglutamate hydro 100.0
PRK13775328 formimidoylglutamase; Provisional 100.0
PRK02190301 agmatinase; Provisional 100.0
TIGR01230275 agmatinase agmatinase. Note: a history of early mi 100.0
TIGR01227307 hutG formimidoylglutamase. Formiminoglutamase, the 100.0
PRK13774311 formimidoylglutamase; Provisional 100.0
PRK13772314 formimidoylglutamase; Provisional 100.0
PRK01722320 formimidoylglutamase; Provisional 100.0
PRK13776318 formimidoylglutamase; Provisional 100.0
PRK13773324 formimidoylglutamase; Provisional 100.0
PF00491277 Arginase: Arginase family; InterPro: IPR006035 The 100.0
TIGR01229300 rocF_arginase arginase. This model helps resolve a 100.0
KOG2965318 consensus Arginase [Amino acid transport and metab 100.0
PF12640162 UPF0489: UPF0489 domain; InterPro: IPR024131 This 95.92
>KOG2964 consensus Arginase family protein [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-81  Score=568.82  Aligned_cols=332  Identities=41%  Similarity=0.620  Sum_probs=295.8

Q ss_pred             CccccccccchhhhhhcccC-----CCHHHHHhccccccccccchhhhhhhhhhhhhhhcCCCcccEEEEEeeCCCCCCC
Q 019572            1 MSAMIGKRGVHYLQKLKSAN-----IPIAVIEKGQNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSF   75 (339)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~t~~r~~~~~~~~~~~~~~~~~~~i~ilGvP~d~g~s~   75 (339)
                      ||-.+|..|++|.+++..+.     +|.+..|+.|+|...+..|.++...+|++++++...+++.|+++||||||+|+||
T Consensus         8 ~~~~~G~~g~~~~~~l~~~rt~~~~~~d~~~e~~~~~~~da~~sgI~t~~rLp~~~v~~~~~e~~d~AfiGvPldtgtS~   87 (361)
T KOG2964|consen    8 LSRGIGGLGARYAHRLEPARTQSRAVSDDSREQDQSREFDASYSGIATFARLPGVLVLLSGSEDFDIAFIGVPLDTGTSY   87 (361)
T ss_pred             hhhcccccccchhhhhccccccccccCcccccCCCCceeehhhhhhHHhhcCCceEEEecCCCccceEEeccccCCCccC
Confidence            46678889999988877654     6788999999998887778777777888888988878889999999999999999


Q ss_pred             CCCccchHHHHHHHHhcCCCCCCcccCCCCCCCccccccCCcccccccCCCCCHHHHHHHHHHHHHHHHh------cCCC
Q 019572           76 LQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVME------EDPL  149 (339)
Q Consensus        76 r~Ga~~gP~aIR~a~~~~~~~~~~~~g~~~~~~~~i~D~GDv~~~~~~~~~~~~~~~~~~i~~~v~~il~------~~~~  149 (339)
                      |||+||||..||+++|+.+++..+..+..+.+..+++|||||+++.++     ...+.+++++.+.+++.      .++.
T Consensus        88 rpGarFgP~~IRE~s~~~~t~n~s~e~~pfksw~~l~D~GDIpV~~yd-----~~~a~~q~~~~y~~l~~rkg~a~~~~~  162 (361)
T KOG2964|consen   88 RPGARFGPSRIREASRRLNTVNPSLEGNPFKSWAKLVDCGDIPVTSYD-----NQGADDQIEEAYISLLARKGVAKDGPV  162 (361)
T ss_pred             CCccccCCchhhhhhhhhcccCCCcCCccccChhhhcccCCcchhhhh-----hhhHHHHHHHHHHHHHHhhhhccCCce
Confidence            999999999999999999888777667777777889999999998763     33444555544444433      4557


Q ss_pred             eeEEeCCCCcchhHhHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCCChhHHHHHHhCCCCCc--EEEEccCCCCHH--
Q 019572          150 HPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARR--LLQVGIRSITKE--  225 (339)
Q Consensus       150 ~pi~lGGDHsit~~~l~al~~~~~~~l~vI~~DAH~D~~~~~~g~~~~hgs~~~~~~~~g~~~~--~v~iGiR~~~~~--  225 (339)
                      .|++|||||+|+||++|+++++|| |++|||||||+|+|++.+|+.++||++|++++++|+.++  .+|+|||+...+  
T Consensus       163 ~PltLGGDHtI~yPilRAvs~k~G-PV~ilH~DaH~Dt~d~~~g~~~~Hgs~F~r~~~eGl~~~~~~iq~GIRt~~s~~~  241 (361)
T KOG2964|consen  163 LPLTLGGDHTIVYPILRAVSRKYG-PVSILHFDAHLDTWDPKEGGKINHGSYFYRASQEGLASNDRNIQAGIRTILSGLS  241 (361)
T ss_pred             eeeeecCCceeeHHHHHHHHHhhC-CceEEEeccCccccCccccCccccchHHHHHhhcccccCCceeeeeeeecccCcC
Confidence            899999999999999999999997 999999999999999999999999999999999998766  999999997655  


Q ss_pred             HHHHHHHcCceEEEcccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHHHHHHHHHhhC-C
Q 019572          226 GREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQA-D  302 (339)
Q Consensus       226 e~~~~~~~g~~~~~~~~~~~~--~~~l~~l~~~~~~~~vYlS~DiDvLDpa~aPgtgtp~pgGls~~e~~~il~~l~~-~  302 (339)
                      .+++-++.|++++.++++++.  ..++++++...|++.||||||||||||+|||||||||+||+|++|++.|||.+.+ +
T Consensus       242 ~ye~d~~~Gf~~ieare~~~~gi~~i~e~ir~~~G~k~vYiSiDID~LDPafAPgtgtpE~gGlt~re~l~ILrglqGl~  321 (361)
T KOG2964|consen  242 DYEQDKRCGFEIIEAREIDKIGIDPIVERIRQRVGDKLVYISIDIDVLDPAFAPGTGTPETGGLTTREMLNILRGLQGLN  321 (361)
T ss_pred             chhhccccCeEEEEeeehhhhhhHHHHHHHHHhcCCceEEEEEeecccCcccCCCCCCCCCCCcCHHHHHHHHhhCcccc
Confidence            788889999999999999987  6789999988999999999999999999999999999999999999999999987 9


Q ss_pred             eeEEEEeeeCCCCCCCCChHHHHHHHHHHHHHHhhhC
Q 019572          303 VVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK  339 (339)
Q Consensus       303 vvG~DivEv~P~~D~~~~~Ta~laA~li~~~l~~~~~  339 (339)
                      +||+|||||||+|| .+++|+++||++++|++++|+|
T Consensus       322 lVGaDvVEvsP~yD-~ae~Tal~AA~llfEi~s~m~K  357 (361)
T KOG2964|consen  322 LVGADVVEVSPPYD-VAEMTALAAADLLFEILSKMVK  357 (361)
T ss_pred             ccccceEEecCccc-hhhhHHHHHHHHHHHHHHhccc
Confidence            99999999999999 5899999999999999999998

>PLN02615 arginase Back     alignment and domain information
>COG0010 SpeB Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13775 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK02190 agmatinase; Provisional Back     alignment and domain information
>TIGR01230 agmatinase agmatinase Back     alignment and domain information
>TIGR01227 hutG formimidoylglutamase Back     alignment and domain information
>PRK13774 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK13772 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK01722 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK13776 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK13773 formimidoylglutamase; Provisional Back     alignment and domain information
>PF00491 Arginase: Arginase family; InterPro: IPR006035 The ureohydrolase superfamily includes arginase (3 Back     alignment and domain information
>TIGR01229 rocF_arginase arginase Back     alignment and domain information
>KOG2965 consensus Arginase [Amino acid transport and metabolism] Back     alignment and domain information
>PF12640 UPF0489: UPF0489 domain; InterPro: IPR024131 This entry describes a family of uncharacterised proteins found in metazoa Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
3lhl_A287 Crystal Structure Of A Putative Agmatinase From Clo 2e-26
3nio_A319 Crystal Structure Of Pseudomonas Aeruginosa Guanidi 5e-26
3pzl_A313 The Crystal Structure Of Agmatine Ureohydrolase Of 5e-24
4dz4_A324 X-Ray Crystal Structure Of A Hypothetical Agmatinas 8e-23
3nip_A326 Crystal Structure Of Pseudomonas Aeruginosa Guanidi 2e-21
1wog_A305 Crystal Structure Of Agmatinase Reveals Structural 2e-20
1gq6_A313 Proclavaminate Amidino Hydrolase From Streptomyces 5e-19
3m1r_A322 The Crystal Structure Of Formimidoylglutamase From 5e-19
1cev_A299 Arginase From Bacillus Caldovelox, Native Structure 3e-13
2eiv_A291 Crystal Structure Of The Arginase From Thermus Ther 3e-11
2ef4_A290 Crystal Structure Of The Arginase From Thermus Ther 3e-11
3mmr_A413 Structure Of Plasmodium Falciparum Arginase In Comp 1e-09
1pq3_A306 Human Arginase Ii: Crystal Structure And Physiologi 1e-09
1xfk_A336 1.8a Crsytal Strucutre Of Formiminoglutamase From V 6e-09
3e6v_A322 X-Ray Structure Of Human Arginase I-D183n Mutant: T 3e-08
3e6k_A322 X-Ray Structure Of Human Arginase I: The Mutant D18 3e-08
1zpe_A314 Arginase I Covalently Modified With Butylamine At Q 3e-08
1t5g_A314 Arginase-F2-L-Arginine Complex Length = 314 3e-08
4ity_A330 Crystal Structure Of Leishmania Mexicana Arginase L 4e-08
3e8q_A323 X-Ray Structure Of Rat Arginase I-T135a: The Unliga 5e-08
1wva_A322 Crystal Structure Of Human Arginase I From Twinned 5e-08
1wvb_A322 Crystal Structure Of Human Arginase I: The Mutant E 8e-08
1hqg_A323 Crystal Structure Of The H141c Arginase Variant Com 8e-08
3e8z_A323 X-Ray Structure Of Rat Arginase I-N130a Mutant: The 9e-08
1tbj_A314 H141a Mutant Of Rat Liver Arginase I Length = 314 9e-08
1hqx_A323 R308k Arginase Variant Length = 323 9e-08
1rla_A323 Three-Dimensional Structure Of Rat Liver Arginase, 9e-08
1ta1_A314 H141c Mutant Of Rat Liver Arginase I Length = 314 9e-08
1tbh_A314 H141d Mutant Of Rat Liver Arginase I Length = 314 9e-08
1tbl_A314 H141n Mutant Of Rat Liver Arginase I Length = 314 9e-08
1t4s_A314 Arginase-L-Valine Complex Length = 314 1e-07
2rla_A323 Altering The Binuclear Manganese Cluster Of Arginas 1e-07
1p8o_A314 Structural And Functional Importance Of First-Shell 3e-07
1p8q_A314 Structural And Functional Importance Of First-Shell 3e-07
1p8m_A314 Structural And Functional Importance Of First-shell 3e-07
3rla_A323 Altering The Binuclear Manganese Cluster Of Arginas 6e-07
1p8p_A314 Structural And Functional Importance Of First-shell 6e-07
1p8n_A314 Structural And Functional Importance Of First-shell 7e-07
1p8r_A308 Structural And Functional Importance Of First-Shell 7e-07
1p8s_A314 Structural And Functional Importance Of First-Shell 9e-07
4g3h_A330 Crystal Structure Of Helicobacter Pylori Arginase L 2e-05
2a0m_A316 Arginase Superfamily Protein From Trypanosoma Cruzi 5e-04
>pdb|3LHL|A Chain A, Crystal Structure Of A Putative Agmatinase From Clostridium Difficile Length = 287 Back     alignment and structure 
Iteration: 1

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 17/278 (6%)
Query: 64  LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIR 123
           + GV     +S   G  FA    R+  +   T S   +  +L D  +  D GD+ +    
Sbjct: 12  VFGVGFDGTTSNRPGARFASSSXRKEFYGLETYSPFLD-LDLEDYNIC-DYGDLEIS--- 66
Query: 124 DCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDA 183
             G  +  L  +  E+ K+V   D   P  +GG+H ++ P  +AV EK    + V+H DA
Sbjct: 67  -VGSTEQVLKEIYQETYKIV--RDSKVPFXIGGEHLVTLPAFKAVHEKYN-DIYVIHFDA 122
Query: 184 HPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTF 243
           H D+ + +  +K SHA+   RI +     ++ Q GIRS TKE      +F  E+      
Sbjct: 123 HTDLREEYNNSKNSHATVIKRIWDIVGDNKIFQFGIRSGTKEEF----KFATEEKHTYXE 178
Query: 244 SRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFR---DVLNILHNLQ 300
                  EN+      K +Y+++D+D LD +  PG    EPGG+++R   ++  I+ N  
Sbjct: 179 IGGIDTFENIVNXLNGKNIYLTIDLDVLDASVFPGTGTPEPGGVNYREFQEIFKIIKNSN 238
Query: 301 ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKIS 338
            ++V  D+VE +P  DT  G++ ++A K++REL   IS
Sbjct: 239 INIVGCDIVELSPDYDTT-GVSTVIACKILRELCLIIS 275
>pdb|3NIO|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Guanidinobutyrase Length = 319 Back     alignment and structure
>pdb|3PZL|A Chain A, The Crystal Structure Of Agmatine Ureohydrolase Of Thermoplasma Volcanium Length = 313 Back     alignment and structure
>pdb|4DZ4|A Chain A, X-Ray Crystal Structure Of A Hypothetical Agmatinase From Burkholderia Thailandensis Length = 324 Back     alignment and structure
>pdb|3NIP|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Guanidinopropionase Complexed With 1,6-Diaminohexane Length = 326 Back     alignment and structure
>pdb|1WOG|A Chain A, Crystal Structure Of Agmatinase Reveals Structural Conservation And Inhibition Mechanism Of The Ureohydrolase Superfamily Length = 305 Back     alignment and structure
>pdb|1GQ6|A Chain A, Proclavaminate Amidino Hydrolase From Streptomyces Clavuligerus Length = 313 Back     alignment and structure
>pdb|3M1R|A Chain A, The Crystal Structure Of Formimidoylglutamase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 322 Back     alignment and structure
>pdb|1CEV|A Chain A, Arginase From Bacillus Caldovelox, Native Structure At Ph 5.6 Length = 299 Back     alignment and structure
>pdb|2EIV|A Chain A, Crystal Structure Of The Arginase From Thermus Thermophilus Length = 291 Back     alignment and structure
>pdb|2EF4|A Chain A, Crystal Structure Of The Arginase From Thermus Thermophilus Length = 290 Back     alignment and structure
>pdb|3MMR|A Chain A, Structure Of Plasmodium Falciparum Arginase In Complex With Abh Length = 413 Back     alignment and structure
>pdb|1PQ3|A Chain A, Human Arginase Ii: Crystal Structure And Physiological Role In Male And Female Sexual Arousal Length = 306 Back     alignment and structure
>pdb|1XFK|A Chain A, 1.8a Crsytal Strucutre Of Formiminoglutamase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 Length = 336 Back     alignment and structure
>pdb|3E6V|A Chain A, X-Ray Structure Of Human Arginase I-D183n Mutant: The Complex With Abh Length = 322 Back     alignment and structure
>pdb|3E6K|A Chain A, X-Ray Structure Of Human Arginase I: The Mutant D183a In Complex With Abh Length = 322 Back     alignment and structure
>pdb|1ZPE|A Chain A, Arginase I Covalently Modified With Butylamine At Q19c Length = 314 Back     alignment and structure
>pdb|1T5G|A Chain A, Arginase-F2-L-Arginine Complex Length = 314 Back     alignment and structure
>pdb|4ITY|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase Length = 330 Back     alignment and structure
>pdb|3E8Q|A Chain A, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded Complex Length = 323 Back     alignment and structure
>pdb|1WVA|A Chain A, Crystal Structure Of Human Arginase I From Twinned Crystal Length = 322 Back     alignment and structure
>pdb|1WVB|A Chain A, Crystal Structure Of Human Arginase I: The Mutant E256q Length = 322 Back     alignment and structure
>pdb|1HQG|A Chain A, Crystal Structure Of The H141c Arginase Variant Complexed With Products Ornithine And Urea Length = 323 Back     alignment and structure
>pdb|3E8Z|A Chain A, X-Ray Structure Of Rat Arginase I-N130a Mutant: The Unliganded Complex Length = 323 Back     alignment and structure
>pdb|1TBJ|A Chain A, H141a Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1HQX|A Chain A, R308k Arginase Variant Length = 323 Back     alignment and structure
>pdb|1RLA|A Chain A, Three-Dimensional Structure Of Rat Liver Arginase, The Binuclear Manganese Metalloenzyme Of The Urea Cycle Length = 323 Back     alignment and structure
>pdb|1TA1|A Chain A, H141c Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1TBH|A Chain A, H141d Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1TBL|A Chain A, H141n Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1T4S|A Chain A, Arginase-L-Valine Complex Length = 314 Back     alignment and structure
>pdb|2RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase Diminishes Thermostability And Catalytic Function Length = 323 Back     alignment and structure
>pdb|1P8O|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8Q|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8M|A Chain A, Structural And Functional Importance Of First-shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|3RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase Diminishes Thermostability And Catalytic Function Length = 323 Back     alignment and structure
>pdb|1P8P|A Chain A, Structural And Functional Importance Of First-shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8N|A Chain A, Structural And Functional Importance Of First-shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8R|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 308 Back     alignment and structure
>pdb|1P8S|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|4G3H|A Chain A, Crystal Structure Of Helicobacter Pylori Arginase Length = 330 Back     alignment and structure
>pdb|2A0M|A Chain A, Arginase Superfamily Protein From Trypanosoma Cruzi Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
3pzl_A313 Agmatine ureohydrolase; structural genomics, PSI-2 8e-75
3lhl_A287 Putative agmatinase; protein structure initiative 1e-69
2a0m_A316 Arginase superfamily protein; structural genomics, 1e-66
3m1r_A322 Formimidoylglutamase; structural genomics, PSI-2, 2e-66
1woh_A305 Agmatinase; alpha/beta fold, hydrolase; 1.75A {Dei 4e-65
4dz4_A324 Agmatinase; hydrolase; 1.70A {Burkholderia thailan 1e-63
1gq6_A313 Proclavaminate amidino hydrolase; clavaminic, PAH, 2e-62
1xfk_A336 Formimidoylglutamase; formiminoglutamase protein, 3e-61
3niq_A326 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pse 1e-57
2cev_A299 Protein (arginase); enzyme, hydrolase, arginine hy 8e-55
3nio_A319 Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: M 1e-54
2ef5_A290 Arginase; TTHA1496, structural genomic NPPSFA, nat 3e-52
1pq3_A306 Arginase II, mitochondrial precursor; biosynthetic 1e-50
4g3h_A330 Arginase (ROCF); rossmann fold, hydrolytic enzyme, 2e-49
2aeb_A322 Arginase 1; hydrolase, binuclear manganese cluster 8e-49
3sl1_A413 Arginase; metallohydrolase, hydrolase-hydrolase in 3e-48
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1} Length = 313 Back     alignment and structure
 Score =  232 bits (594), Expect = 8e-75
 Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 25/281 (8%)

Query: 64  LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTT---EEGKELNDPRVLTDVGDVPVQ 120
           + G+P  + SS+ +G  +AP  IR A      N  +     G +L    +  D+GD+   
Sbjct: 39  VFGIPFDNTSSYRRGSKYAPDSIRGA----YVNLESYEYSYGIDLLASGMA-DLGDMEES 93

Query: 121 EIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLH 180
                  D + +++ +   V  VM +  + P++LGG+HSI+   +RA+ + +     ++ 
Sbjct: 94  ------EDVEYVIDTVESVVSAVMSDGKI-PIMLGGEHSITVGAVRALPKDVD----LVI 142

Query: 181 LDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEM 240
           +DAH D   ++ GNKY+HA    R ++     R+  +GIRS+++E  E      V     
Sbjct: 143 VDAHSDFRSSYMGNKYNHACVTRRALDLLGEGRITSIGIRSVSREEFEDPDFRKVSFISS 202

Query: 241 RTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHN 298
               ++   +++E +      + VYISVD+D +DPA+AP V   EP GL+  DV  ++  
Sbjct: 203 FDVKKNGIDKYIEEVD--RKSRRVYISVDMDGIDPAYAPAVGTPEPFGLADTDVRRLIER 260

Query: 299 LQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
           L    V  D+VEF+P  D   G T+M+AAKL++   A   K
Sbjct: 261 LSYKAVGFDIVEFSPLYDN--GNTSMLAAKLLQVFIASREK 299
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile} Length = 287 Back     alignment and structure
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1 Length = 316 Back     alignment and structure
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis} Length = 322 Back     alignment and structure
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A Length = 305 Back     alignment and structure
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis} Length = 324 Back     alignment and structure
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A Length = 313 Back     alignment and structure
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1 Length = 336 Back     alignment and structure
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A Length = 326 Back     alignment and structure
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A* Length = 299 Back     alignment and structure
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} Length = 319 Back     alignment and structure
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A Length = 290 Back     alignment and structure
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1 Length = 306 Back     alignment and structure
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori} Length = 330 Back     alignment and structure
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ... Length = 322 Back     alignment and structure
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A* Length = 413 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query339
3nio_A319 Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: M 100.0
3niq_A326 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pse 100.0
4dz4_A324 Agmatinase; hydrolase; 1.70A {Burkholderia thailan 100.0
1gq6_A313 Proclavaminate amidino hydrolase; clavaminic, PAH, 100.0
3m1r_A322 Formimidoylglutamase; structural genomics, PSI-2, 100.0
1woh_A305 Agmatinase; alpha/beta fold, hydrolase; 1.75A {Dei 100.0
3lhl_A287 Putative agmatinase; protein structure initiative 100.0
2a0m_A316 Arginase superfamily protein; structural genomics, 100.0
3pzl_A313 Agmatine ureohydrolase; structural genomics, PSI-2 100.0
1xfk_A336 Formimidoylglutamase; formiminoglutamase protein, 100.0
2ef5_A290 Arginase; TTHA1496, structural genomic NPPSFA, nat 100.0
2cev_A299 Protein (arginase); enzyme, hydrolase, arginine hy 100.0
4g3h_A330 Arginase (ROCF); rossmann fold, hydrolytic enzyme, 100.0
1pq3_A306 Arginase II, mitochondrial precursor; biosynthetic 100.0
2aeb_A322 Arginase 1; hydrolase, binuclear manganese cluster 100.0
3sl1_A413 Arginase; metallohydrolase, hydrolase-hydrolase in 100.0
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0 Back     alignment and structure
Probab=100.00  E-value=4.2e-70  Score=521.31  Aligned_cols=295  Identities=28%  Similarity=0.486  Sum_probs=254.4

Q ss_pred             cccccccccchhhhhhhhhhhhhhhcCCCcccEEEEEeeCCCCCCCCCCccchHHHHHHHHhcCCCCCCcccCCCCCCCc
Q 019572           30 QNRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPR  109 (339)
Q Consensus        30 ~~~~~~~~~t~~r~~~~~~~~~~~~~~~~~~~i~ilGvP~d~g~s~r~Ga~~gP~aIR~a~~~~~~~~~~~~g~~~~~~~  109 (339)
                      .|+|.| ++||+|+|+.-.   ..++.+  ++++|+|||||.|+++|+|+|+||++||++++.+..+.. +.+.++++..
T Consensus        14 ~~~~~g-~~tf~~~p~~~~---~~~~~~--~~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~~~~~-~~~~~~~~~~   86 (319)
T 3nio_A           14 MPRFGG-IATMMRLPHVQS---PAELDA--LDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNM-ATGAAPFDSL   86 (319)
T ss_dssp             SCTTCS-CCCGGGCCBCCS---HHHHTT--CSEEEEECCCCTTCSSCCCGGGHHHHHHHHGGGCCSEET-TTCBCGGGTS
T ss_pred             CCCcCC-CccccCCCCcCC---ccccCC--CCEEEEeeeeCCCCCCCchHHHHHHHHHHHhhhccccCc-ccCcccccCC
Confidence            478999 999999997211   112335  799999999999999999999999999999886543321 2344333445


Q ss_pred             cccccCCcccccccCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEeCCCCcchhHhHHHHHHHcCCCeEEEEEecCCCCCC
Q 019572          110 VLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYD  189 (339)
Q Consensus       110 ~i~D~GDv~~~~~~~~~~~~~~~~~~i~~~v~~il~~~~~~pi~lGGDHsit~~~l~al~~~~~~~l~vI~~DAH~D~~~  189 (339)
                      .++|+||+.+.+.     +.++++++|++.++.+++++ .+||+|||||++|||.++++++++ ++++|||||||+|+++
T Consensus        87 ~v~D~Gdv~~~~~-----~~~~~~~~i~~~v~~~l~~g-~~pi~lGGdHsit~~~~~al~~~~-~~l~vI~~DAH~Dl~~  159 (319)
T 3nio_A           87 NVADIGDVAINTF-----NLLEAVRIIEQEYDRILGHG-ILPLTLGGDHTITLPILRAIXKXH-GXVGLVHVDAHADVND  159 (319)
T ss_dssp             CEEEEEECCCCTT-----CHHHHHHHHHHHHHHHHHTT-CEEEEECCCGGGHHHHHHHHHHHH-CSEEEEEECSSCCCCS
T ss_pred             cEEEecCCCCCCC-----CHHHHHHHHHHHHHHHHHCC-CEEEEECCcchhhHHHHHHHHhhc-CceEEEEEecCcccCC
Confidence            6899999988643     78999999999999999887 899999999999999999999988 4999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHhCCC--CCcEEEEccCC--CCHHHHHHHHHcCceEEEcccccch--HHHHHHhhccCCcceEE
Q 019572          190 AFEGNKYSHASSFARIMEGGY--ARRLLQVGIRS--ITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVY  263 (339)
Q Consensus       190 ~~~g~~~~hgs~~~~~~~~g~--~~~~v~iGiR~--~~~~e~~~~~~~g~~~~~~~~~~~~--~~~l~~l~~~~~~~~vY  263 (339)
                      ++.|+.++|||||+++++++.  +++++|||+|+  ++++|++++++.|+++++++++...  .++++.+....++++||
T Consensus       160 ~~~g~~~~hG~~~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vy  239 (319)
T 3nio_A          160 HMFGEXIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAEDFNWSRXQGFRVVQAEECWHXSLEPLMAEVREXVGGGPVY  239 (319)
T ss_dssp             CBTTBSCSTTTHHHHHHHTTCEEEEEEEEEEECSEESSTHHHHHHHHHTCEEEEGGGTTTCCSHHHHHHHHHHHCSSEEE
T ss_pred             CCCccccccccHHHHHhhccCCCCCcEEEEEeCCCCCCHHHHHHHHhcCcEEEEHHHhhhcCHHHHHHHHHHhcCCCcEE
Confidence            888888999999999999875  47999999998  6889999999999999999998753  45555553222457999


Q ss_pred             EEEeccccCCCCCCCCCCCCCCCCCHHHHHHHHHHhhC-CeeEEEEeeeCCCCCCCCChHHHHHHHHHHHHHHhhhC
Q 019572          264 ISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQA-DVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK  339 (339)
Q Consensus       264 lS~DiDvLDpa~aPgtgtp~pgGls~~e~~~il~~l~~-~vvG~DivEv~P~~D~~~~~Ta~laA~li~~~l~~~~~  339 (339)
                      ||||+|||||++|||||||+||||+++|++++++.+.+ +|+|+||||+||.+|. +++|+.+||++++++|..+++
T Consensus       240 lSiDiDvLDpa~aPgtgtp~pgGlt~~e~~~~l~~l~~~~vvg~DivEv~P~~D~-~~~Ta~laa~li~~~l~~~~~  315 (319)
T 3nio_A          240 LSFDIDGIDPAWAPGTGTPEIGGLTTIQAMEIIRGCQGLDLIGCDLVEVSPPYDT-TGNTSLLGANLLYEMLCVLPG  315 (319)
T ss_dssp             EEEEGGGBCTTTCCCBSSCCSSCBCHHHHHHHHHTTTTSEEEEEEEECBCGGGCS-SSHHHHHHHHHHHHHHHTSTT
T ss_pred             EEEecCccChhhCCCCCCCCCCCCCHHHHHHHHHHhccCCeeEEEEEEECCCCCC-CCcHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999864 8999999999999997 789999999999999998874
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A Back     alignment and structure
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis} Back     alignment and structure
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A Back     alignment and structure
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis} Back     alignment and structure
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A Back     alignment and structure
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile} Back     alignment and structure
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1 Back     alignment and structure
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1} Back     alignment and structure
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1 Back     alignment and structure
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A Back     alignment and structure
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A* Back     alignment and structure
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori} Back     alignment and structure
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1 Back     alignment and structure
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ... Back     alignment and structure
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 339
d1xfka_324 c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio ch 6e-43
d1woha_303 c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans 2e-40
d1gq6a_301 c.42.1.1 (A:) Proclavaminate amidino hydrolase {St 2e-40
d2ceva_298 c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId 6e-37
d1pq3a_306 c.42.1.1 (A:) Arginase {Human (Homo sapiens), isof 8e-37
d2aeba1309 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) 6e-36
d2a0ma1298 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [T 2e-34
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Arginase/deacetylase
superfamily: Arginase/deacetylase
family: Arginase-like amidino hydrolases
domain: Formimidoylglutamase HutG
species: Vibrio cholerae [TaxId: 666]

 Score =  149 bits (376), Expect = 6e-43
 Identities = 57/300 (19%), Positives = 116/300 (38%), Gaps = 42/300 (14%)

Query: 64  LLGVPLGHNSSFLQ---GPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQ 120
           L+G          +   G   AP  I++A+               + P  + D+G++  +
Sbjct: 38  LIGFECDAGVERNKGRTGAKHAPSLIKQALA----------NLAWHHPIPIYDLGNIRCE 87

Query: 121 EIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLG------G 174
                G + ++      + ++  +       +VLGG H I++   + +++          
Sbjct: 88  -----GDELEQAQQECAQVIQQALPHA--RAIVLGGGHEIAWATFQGLAQHFLATGVKQP 140

Query: 175 PVDVLHLDAHPDIYDA---FEGNKYSHASSFARIMEGGYAR------RLLQVGIRSITKE 225
            + +++ DAH D+          + S  + F +I      +        L V   S T  
Sbjct: 141 RIGIINFDAHFDLRTFESELAPVRPSSGTPFNQIHHFCQQQGWDFHYACLGVSRASNTPA 200

Query: 226 GREQGKRFGVEQYEMRTFSRDRQF---LENLKLGEGVKGVYISVDVDCLDPAFAPGVSHI 282
             E+  + GV   E + FS         +     +    +Y+++D+D    A APGVS  
Sbjct: 201 LFERADKLGVWYVEDKAFSPLSLKDHLTQLQHFIDDCDYLYLTIDLDVFPAASAPGVSAP 260

Query: 283 EPGGLSFRDVLNILHNLQA---DVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 339
              G+S   +      +      ++ AD+ E+NP  D +D  TA +AA+L  ++   +++
Sbjct: 261 AARGVSLEALAPYFDRILHYKNKLMIADIAEYNPSFD-IDQHTARLAARLCWDIANAMAE 319
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId: 1299]} Length = 303 Back     information, alignment and structure
>d1gq6a_ c.42.1.1 (A:) Proclavaminate amidino hydrolase {Streptomyces clavuligerus [TaxId: 1901]} Length = 301 Back     information, alignment and structure
>d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]} Length = 298 Back     information, alignment and structure
>d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]} Length = 306 Back     information, alignment and structure
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 Back     information, alignment and structure
>d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId: 5693]} Length = 298 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query339
d1gq6a_301 Proclavaminate amidino hydrolase {Streptomyces cla 100.0
d1woha_303 Agmatinase {Deinococcus radiodurans [TaxId: 1299]} 100.0
d2a0ma1298 Arginase {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1xfka_324 Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 100.0
d2ceva_298 Arginase {Bacillus caldovelox [TaxId: 33931]} 100.0
d1pq3a_306 Arginase {Human (Homo sapiens), isoform II, mitoch 100.0
d2aeba1309 Arginase {Human (Homo sapiens) [TaxId: 9606]} 100.0
>d1gq6a_ c.42.1.1 (A:) Proclavaminate amidino hydrolase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Arginase/deacetylase
superfamily: Arginase/deacetylase
family: Arginase-like amidino hydrolases
domain: Proclavaminate amidino hydrolase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=100.00  E-value=1.9e-68  Score=504.23  Aligned_cols=291  Identities=29%  Similarity=0.466  Sum_probs=249.2

Q ss_pred             ccccccccchhhhhhhhhhhhhhhcCCCcccEEEEEeeCCCCCCCCCCccchHHHHHHHHhcCCCCCCcccCCCCCCCcc
Q 019572           31 NRVIDASLTLIRERAKLKGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRV  110 (339)
Q Consensus        31 ~~~~~~~~t~~r~~~~~~~~~~~~~~~~~~~i~ilGvP~d~g~s~r~Ga~~gP~aIR~a~~~~~~~~~~~~g~~~~~~~~  110 (339)
                      |||.| ++||||+|+      .+++.+  +||+|+|+|||.|+++|+|||+||++||+++..+..+.. +.+.++.+...
T Consensus         2 p~~~g-~~tF~~~p~------~~~~~~--~di~ilGvP~D~g~s~r~Ga~~gP~aIR~as~~~~~~~~-~~~~~~~~~~~   71 (301)
T d1gq6a_           2 PRYAQ-IPTFMRLPH------DPQPRG--YDVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGI-DRGPGTFDLIN   71 (301)
T ss_dssp             CTTCS-SCCGGGCCB------CSSCCS--CSEEEEEECCCTTCSSCCCGGGHHHHHHHHHTTCCSCCS-SCCSCHHHHSC
T ss_pred             CCCCC-chhhcCCCC------CCCcCC--CCEEEECCCccCCCCCCchHHHhHHHHHHHHhcccccCc-ccccccccccc
Confidence            89999 999999998      677777  899999999999999999999999999999876544321 23333434456


Q ss_pred             ccccCCcccccccCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEeCCCCcchhHhHHHHHHHcCCCeEEEEEecCCCCCCC
Q 019572          111 LTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDA  190 (339)
Q Consensus       111 i~D~GDv~~~~~~~~~~~~~~~~~~i~~~v~~il~~~~~~pi~lGGDHsit~~~l~al~~~~~~~l~vI~~DAH~D~~~~  190 (339)
                      ++|+||+.+...     +.+++++++++.+..+++.+ .+||+||||||+|||.++++.+.+ ++++|||||||+|+++.
T Consensus        72 ~~d~g~~~~~~~-----~~~~~~~~i~~~v~~~~~~~-~~pi~LGGdHsis~~~~~a~~~~~-~~~~vi~~DAH~Dl~~~  144 (301)
T d1gq6a_          72 CVDAGDINLTPF-----DMNIAIDTAQSHLSGLLKAN-AAFLMIGGDHSLTVAALRAVAEQH-GPLAVVHLDAHSDTNPA  144 (301)
T ss_dssp             EEEEEECCCCSS-----CHHHHHHHHHHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHHH-SSEEEEEECSSCCCCCC
T ss_pred             ccccCcccccch-----hhhhhhhhhHHHHHHHHhcC-Cceeecccccccccchhhhhhhcc-CceEEEEecccCCCCcc
Confidence            899999987643     78999999999999999987 899999999999999999998887 48999999999999988


Q ss_pred             CCCCCCCChhHHHHHHhCCC--CCcEEEEccCCCC--HHHHHHHHHcCceEEEcccccch--HHHHHHhhccCCcceEEE
Q 019572          191 FEGNKYSHASSFARIMEGGY--ARRLLQVGIRSIT--KEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYI  264 (339)
Q Consensus       191 ~~g~~~~hgs~~~~~~~~g~--~~~~v~iGiR~~~--~~e~~~~~~~g~~~~~~~~~~~~--~~~l~~l~~~~~~~~vYl  264 (339)
                      ..|+.++|||||+++++++.  +++++|||+|++.  ++++++.++.++.++++.++.+.  ..+.+.+....+.+++||
T Consensus       145 ~~g~~~~~g~~~~~~~~~~~~~~~~~~~iG~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyv  224 (301)
T d1gq6a_         145 FYGGRYHHGTPFRHGIDEKLIDPAAMVQIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYV  224 (301)
T ss_dssp             BTTBTTCTTCHHHHHHHTTSEEEEEEEEEEECCC------CHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHTTSEEEE
T ss_pred             ccCCCCCcchhHHHhhhccccCccceEEEEeccCcchhhHHHHHhccCceEeeHHHHHhhccHHHHHHHHHhhCCceEEE
Confidence            88888999999999999876  4789999999974  55677889999999999887654  223333322235689999


Q ss_pred             EEeccccCCCCCCCCCCCCCCCCCHHHHHHHHHHhh-CCeeEEEEeeeCCCCCCCCChHHHHHHHHHHHHHHhhhC
Q 019572          265 SVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQ-ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK  339 (339)
Q Consensus       265 S~DiDvLDpa~aPgtgtp~pgGls~~e~~~il~~l~-~~vvG~DivEv~P~~D~~~~~Ta~laA~li~~~l~~~~~  339 (339)
                      |||||||||+++|||++|+||||+++|++++++.+. .+++|+||||+||.+|. +++|+++||++++++|.+|+|
T Consensus       225 S~DiDvlDps~aPgt~tP~pgGL~~~e~~~i~~~l~~~~~vg~DivE~~P~~D~-~~~Ta~laa~li~~~l~~~a~  299 (301)
T d1gq6a_         225 SVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCVGDLKPVGFDVMEVSPLYDH-GGITSILATEIGAELLYQYAR  299 (301)
T ss_dssp             EEEGGGBCTTTCCSBSSCCSSCBCHHHHHHHGGGGGGSEEEEEEEECBCGGGCS-TTHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeccccchHHhcCCCCCCCCCCCHHHHHHHHHHHcCCCeEEEEEEEECCCCCC-CCcHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999985 48999999999999996 789999999999999999875
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]} Back     information, alignment and structure
>d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure