Citrus Sinensis ID: 019573

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
Protein Sequence
MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccEEEcccccccccccEEEEEEEEEEEcccccccccEEEEccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEcccccEEEEccccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccEEEEEcccccccccccccccccccccccccccccccccccEEEEccccccccccEEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEcHHHHHcccEEEEEcccccEEEEEccccccccEEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGVDYYKILQVDRNAKEEDLKKAYRKLAMKwhpdknpnnkkdAEAKFKQISEAYdvlsdpqkravydqygeeglkgqmpppgasgfpgagagaggptsfrfntrnpedifseffgfsspfgdmggsrasasgfprgmfgddifasfnrgsagegsanalrkaapiertlpcsledlykgttkkmKISRDvidasgrpntteeiltieikpgwkkgtkitfpekgnelrnvipsdlifiidekphslfkrdgndlvVTQKISLVEALTGYTVQlttldgrtltvpinsvisptyeevikgegmpipkepskrgnlrikfnikfpsklttEQKSGLKRLIP
Flexible Loop (DISEMBL)
mgvdyykilqvdrnakeeDLKKAYRKLAmkwhpdknpnnkKDAEAKFKQISEaydvlsdpqkRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANAlrkaapiertlpcsledlykgttkkmkisrdvidasgrpntteeiltieikpgwkkgtkitfpekgnelrnVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVqlttldgrtltvpinsvisptyeevikgegmpipkepskrgnlrikfnikfpskltteqksglkrlip
Low Complexity Region (SEG)
MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMpppgasgfpgagagaggpTSFRFNTRNPEDIfseffgfsspfgDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP
Disordered region (IsUnstruct)
****YYKILQV*************************************************************************************************IFSEFFGF*********************FGDDIFA***********************TLPCSLEDLYKGTT********VI********TEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIK*****************IKFNI*******************
Disordered Region (DISOPRED)
MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG************************************************************************************************PCSLEDLYKGTT*********************ILTIEIKPGWKKGTKITF*********VIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP
Disordered Region (DISEMBL)
MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGS*********RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSK**************
Disordered Region (DISPRO)
**VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAG*GSA**********RTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	339	2.2.26 [Sep-21-2011]
Q80Y75	316	DnaJ homolog subfamily B	yes	no	0.923	0.990	0.445	2e-72
Q3MI00	340	DnaJ homolog subfamily B	yes	no	0.967	0.964	0.437	2e-72
Q5R8J8	337	DnaJ homolog subfamily B	yes	no	0.952	0.958	0.450	3e-72
Q9UDY4	337	DnaJ homolog subfamily B	yes	no	0.952	0.958	0.450	3e-72
Q2KIT4	337	DnaJ homolog subfamily B	no	no	0.952	0.958	0.444	8e-72
Q5BIP8	348	DnaJ homolog subfamily B	no	no	0.961	0.936	0.434	3e-71
Q9D832	337	DnaJ homolog subfamily B	no	no	0.952	0.958	0.447	3e-71
P25685	340	DnaJ homolog subfamily B	no	no	0.967	0.964	0.44	1e-70
P59910	316	DnaJ homolog subfamily B	no	no	0.920	0.987	0.429	1e-70
O89114	348	DnaJ homolog subfamily B	no	no	0.961	0.936	0.428	3e-70

>sp|Q80Y75|DJB13_MOUSE DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1

 Score =  273 bits (697), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/339 (44%), Positives = 224/339 (66%), Gaps = 26/339 (7%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG+DYY +LQV RN+++  +KKAYRKLA+K HP K+  ++  A   FKQI+EAYDVLSDP
Sbjct: 1   MGLDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLKS--SEPGAPEIFKQIAEAYDVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
            KR +YD++GEEGLKG +P    S  P         T + F+  NP+ +F EFFG  +PF
Sbjct: 59  VKRGIYDKFGEEGLKGGIPLEFGSQTPWT-------TGYVFHG-NPDKVFHEFFGGDNPF 110

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
            +   +            G+DI  +F  G  G G     ++  PIER L  SLEDL+ G 
Sbjct: 111 SEFFDAE-----------GNDIDLNFG-GLWGRGVQ---KQDPPIERDLYLSLEDLFFGC 155

Query: 181 TKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFII 239
           TKK+KISR V++     +T ++ ILTI+++PGW++GT+ITF ++G++  N+IP+D+IFI+
Sbjct: 156 TKKIKISRRVLNEDRYSSTIKDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIV 215

Query: 240 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKG 299
            EK H  F+R+ ++L     I L +ALT  TV++ TLD R L +PIN ++ P Y +++ G
Sbjct: 216 KEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKIVPG 275

Query: 300 EGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           EGMP+P+ PSK+G+L I F+I+FP++LT ++K  L++ +
Sbjct: 276 EGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314

May be involved in inhibiting testis spermatogenesis apoptosis.
Mus musculus (taxid: 10090)

>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3

 Score =  272 bits (696), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 153/350 (43%), Positives = 222/350 (63%), Gaps = 22/350 (6%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY+ L + R A +E++K+AYR+ A+++HPDKN   +  AE KFK+I+EAYDVLSDP
Sbjct: 1   MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           +KR ++D+YGEEGLKG            +G   G   S+ F+  +P  +F+EFFG  +PF
Sbjct: 59  RKREIFDRYGEEGLKGS-----GPSGGSSGGTNGTSFSYTFHG-DPHAMFAEFFGGRNPF 112

Query: 121 GDMGGSRASA---------SGFPRGMFGDDIFASFNRGSAGEGSANALRKA-APIERTLP 170
            +  G R            SGFP GM G   F + N G +        +K   P+   L 
Sbjct: 113 DNFFGQRNGEEGMDIDDPFSGFPMGMGG---FTNMNFGRSRPAQEPTRKKQDPPVTHDLR 169

Query: 171 CSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRN 229
            SLE++Y G TKKMKIS   ++  G+    E+ ILTIE+K GWK+GTKITFP++G++  N
Sbjct: 170 VSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSN 229

Query: 230 VIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVI 289
            IP+D++F++ +KPH++FKRDG+D++   +ISL EAL G TV + TLDGRT+ V    VI
Sbjct: 230 NIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVI 289

Query: 290 SPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
            P     + GEG+P+PK P KRG+L I+F + FP ++    ++ L++++P
Sbjct: 290 RPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Bos taurus (taxid: 9913)

>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1

 Score =  272 bits (695), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 222/351 (63%), Gaps = 28/351 (7%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY IL +++ A +ED+KKAYRK A+K+HPDKN + +  AE KFK+++EAY+VLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQ--AEEKFKEVAEAYEVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR-NPEDIFSEFFGFSSP 119
           +KR +YDQ+GEEGLKG            AG   G   +FR+    +P   F+ FFG S+P
Sbjct: 59  KKREIYDQFGEEGLKGG-----------AGGTDGQGGTFRYTFHGDPHATFAAFFGGSNP 107

Query: 120 FG-----DMGGSRAS----ASGFPRGMFGDDIFAS-FNRGSAGEGSANALRKAAPIERTL 169
           F       MGG R S      G P   FG  +     +R S G    + L++  P+   L
Sbjct: 108 FEIFFGRRMGGGRDSEEMEMDGDPFSAFGFSMNGYPRDRNSVG---PSRLKQDPPVIHEL 164

Query: 170 PCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELR 228
             SLE++Y G TK+MKISR  ++A GR   +E+ ILTIEIK GWK+GTKITFP +G+E  
Sbjct: 165 RVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETP 224

Query: 229 NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV 288
           N IP+D++FII +K H  FKRDG++++ T KISL EAL G ++ + TLDGR + + +N +
Sbjct: 225 NSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDI 284

Query: 289 ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           + P     I G G+P PK P +RG+L I+F + FP  +++  K  L++ +P
Sbjct: 285 VKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335

Probable chaperone.

Pongo abelii (taxid: 9601)

>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1

 Score =  272 bits (695), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 222/351 (63%), Gaps = 28/351 (7%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY IL +++ A +ED+KKAYRK A+K+HPDKN + +  AE KFK+++EAY+VLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSPQ--AEEKFKEVAEAYEVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR-NPEDIFSEFFGFSSP 119
           +KR +YDQ+GEEGLKG            AG   G   +FR+    +P   F+ FFG S+P
Sbjct: 59  KKREIYDQFGEEGLKGG-----------AGGTDGQGGTFRYTFHGDPHATFAAFFGGSNP 107

Query: 120 FG-----DMGGSRASAS----GFPRGMFGDDIFAS-FNRGSAGEGSANALRKAAPIERTL 169
           F       MGG R S      G P   FG  +     +R S G    + L++  P+   L
Sbjct: 108 FEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVG---PSRLKQDPPVIHEL 164

Query: 170 PCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELR 228
             SLE++Y G TK+MKISR  ++A GR   +E+ ILTIEIK GWK+GTKITFP +G+E  
Sbjct: 165 RVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETP 224

Query: 229 NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV 288
           N IP+D++FII +K H  FKRDG++++ T KISL EAL G ++ + TLDGR + + +N +
Sbjct: 225 NSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDI 284

Query: 289 ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           + P     I G G+P PK P +RG+L I+F + FP  +++  K  L++ +P
Sbjct: 285 VKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335

Probable chaperone.

Homo sapiens (taxid: 9606)

>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1

 Score =  270 bits (691), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 28/351 (7%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY IL +++ A +ED+KKAYRK A+++HPDKN + +  AE +FK+++EAY+VLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSPQ--AEERFKEVAEAYEVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR-NPEDIFSEFFGFSSP 119
           +KR +YDQ+GEEGLKG            AG   G   +FR+    +P   F+ FFG S+P
Sbjct: 59  KKREIYDQFGEEGLKGG-----------AGGTDGQGGTFRYTFHGDPHATFAAFFGGSNP 107

Query: 120 FG-----DMGGSRAS----ASGFPRGMFGDDIFAS-FNRGSAGEGSANALRKAAPIERTL 169
           F       MGG R S      G P G FG  +     +R S G    + L++  P+   L
Sbjct: 108 FEIFFGRRMGGGRDSDEMEVDGDPFGAFGFSMNGYPRDRNSVG---PSRLKQDPPVIHEL 164

Query: 170 PCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELR 228
             SLE++Y G TK+MKISR  ++  GR   TE+ ILTIEIK GWK+GTKITFP +G+E  
Sbjct: 165 RVSLEEIYSGCTKRMKISRKRLNPDGRSYRTEDKILTIEIKKGWKEGTKITFPREGDETP 224

Query: 229 NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV 288
             IP+D++F+I +K H  FKRDG++++ T KISL EAL G ++ + T+DGRT+ + IN +
Sbjct: 225 TSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDI 284

Query: 289 ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           + P     I G G+P PK P +RG+L I+F + FP  +++  K  L++ +P
Sbjct: 285 VKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335

Probable chaperone.

Bos taurus (taxid: 9913)

>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1

 Score =  269 bits (687), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 156/359 (43%), Positives = 222/359 (61%), Gaps = 33/359 (9%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYYKIL +   A E+++KKAYRK+A+K+HPDKN   + +AE KFK+I+EAYDVLSDP
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKN--KEPNAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR-NPEDIFSEFFGFSSP 119
           +KR +YDQYGEEGLK              G+  G   SF +    +P   F+ FFG S+P
Sbjct: 59  KKRGLYDQYGEEGLKTG-----------GGSSGGSSGSFHYTFHGDPHATFASFFGGSNP 107

Query: 120 FGDMGGSRASA---SGF------------PRGMFGDDIFASFNRGSAGEGSANALRKAA- 163
           F     S  SA   SGF            P G FG   F   +RG          R+   
Sbjct: 108 FDIFFASSRSARPFSGFDPDDMDVDEDDDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQ 167

Query: 164 --PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITF 220
             P+   L  SLE++Y G+TK+MKI+R  ++  GR   TE+ IL I IK GWK+GTKITF
Sbjct: 168 DPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITF 227

Query: 221 PEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT 280
           P++G+   + IP+D++F++ +KPH+ F+RDG +++ +  ISL EAL G TV + T+DGR 
Sbjct: 228 PKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRV 287

Query: 281 LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           + +P N VI P   + ++GEG+P PK P++RG+L ++F ++FP +LT + +  LK+ +P
Sbjct: 288 IPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346

Bos taurus (taxid: 9913)

>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 157/351 (44%), Positives = 220/351 (62%), Gaps = 28/351 (7%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY IL +D+ A +ED+KKAYRK A+K+HPDKN + +  AE KFK+++EAY+VLSDP
Sbjct: 1   MGKDYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSPQ--AEEKFKEVAEAYEVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR-NPEDIFSEFFGFSSP 119
           +KR +YDQ+GEEGLKG            AG   G   +FR+    +P   F+ FFG S+P
Sbjct: 59  KKREIYDQFGEEGLKGG-----------AGGTDGQGGTFRYTFHGDPHATFAAFFGGSNP 107

Query: 120 FG-----DMGGSRASAS----GFPRGMFGDDIFAS-FNRGSAGEGSANALRKAAPIERTL 169
           F       MGG R S      G P   FG  +     +R S G    + L++  PI   L
Sbjct: 108 FEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVG---PSRLKQDPPIIHEL 164

Query: 170 PCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELR 228
             SLE++Y G TK+MKISR  ++  GR   +E+ ILTIEIK GWK+GTKITFP +G+E  
Sbjct: 165 KVSLEEIYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETP 224

Query: 229 NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV 288
           N IP+D++F+I +K H  FKRDG+++V T KISL EAL G ++ + T+DGR L + +  +
Sbjct: 225 NSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVTDI 284

Query: 289 ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           + P     + G G+P PK P +RG+L I+F++ FP  ++   K  L++ +P
Sbjct: 285 VKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335

Probable chaperone.

Mus musculus (taxid: 10090)

>sp|P25685|DNJB1_HUMAN DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/350 (44%), Positives = 221/350 (63%), Gaps = 22/350 (6%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY+ L + R A +E++K+AYR+ A+++HPDKN   +  AE KFK+I+EAYDVLSDP
Sbjct: 1   MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           +KR ++D+YGEEGLKG             G   G   S+ F+  +P  +F+EFFG  +PF
Sbjct: 59  RKREIFDRYGEEGLKGS-----GPSGGSGGGANGTSFSYTFHG-DPHAMFAEFFGGRNPF 112

Query: 121 GDMGGSRASA---------SGFPRGMFGDDIFASFNRGSAGEGSANALRKA-APIERTLP 170
               G R            SGFP GM G   F + N G +      A +K   P+   L 
Sbjct: 113 DTFFGQRNGEEGMDIDDPFSGFPMGMGG---FTNVNFGRSRSAQEPARKKQDPPVTHDLR 169

Query: 171 CSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRN 229
            SLE++Y G TKKMKIS   ++  G+    E+ ILTIE+K GWK+GTKITFP++G++  N
Sbjct: 170 VSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN 229

Query: 230 VIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVI 289
            IP+D++F++ +KPH++FKRDG+D++   +ISL EAL G TV + TLDGRT+ V    VI
Sbjct: 230 NIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVI 289

Query: 290 SPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
            P     + GEG+P+PK P KRG+L I+F + FP ++    ++ L++++P
Sbjct: 290 RPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Homo sapiens (taxid: 9606)

>sp|P59910|DJB13_HUMAN DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1

 Score =  266 bits (681), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 146/340 (42%), Positives = 221/340 (65%), Gaps = 28/340 (8%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYY +L + RN+++  +K+AYR+LA+K HP K+  N+  +   F+QI+EAYDVLSDP
Sbjct: 1   MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKS--NEPSSAEIFRQIAEAYDVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
            KR +YD++GEEGLKG +P    S  P         T + F+ + PE +F EFFG ++PF
Sbjct: 59  MKRGIYDKFGEEGLKGGIPLEFGSQTPWT-------TGYVFHGK-PEKVFHEFFGGNNPF 110

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAP-IERTLPCSLEDLYKG 179
            +   +  S      G            G  G G    ++K  P +ER L  SLEDL+ G
Sbjct: 111 SEFFDAEGSEVDLNFG------------GLQGRG----VKKQDPQVERDLYLSLEDLFFG 154

Query: 180 TTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238
            TKK+KISR V++  G  +T ++ ILTI++KPGW++GT+ITF ++G++  N+IP+D+IFI
Sbjct: 155 CTKKIKISRRVLNEDGYSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFI 214

Query: 239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIK 298
           + EK H  F+R+ ++L     I L +ALT  TV++ TLD R L +PIN +I P Y + + 
Sbjct: 215 VKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVP 274

Query: 299 GEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           GEGMP+P++P+K+G+L I F+I+FP++LT ++K  L++ +
Sbjct: 275 GEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314

May be involved in inhibiting testis spermatogenesis apoptosis.

Homo sapiens (taxid: 9606)

>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1

 Score =  265 bits (678), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 154/359 (42%), Positives = 221/359 (61%), Gaps = 33/359 (9%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MG DYYKIL +   A E+++KKAYRK+A+K+HPDKN   + +AE KFK+I+EAYDVLSDP
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKN--KEPNAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR-NPEDIFSEFFGFSSP 119
           +KR++YDQYGEEGLK              G+  G   SF +    +P   F+ FFG S+P
Sbjct: 59  KKRSLYDQYGEEGLKTG-----------GGSSGGSGGSFHYTFHGDPHATFASFFGGSNP 107

Query: 120 FGDMGGSRASA---SGFPR------------GMFGDDIFASFNRGSAGEGSANALRKAA- 163
           F     S  S    SGF              G FG   F   +RG          R+   
Sbjct: 108 FDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQ 167

Query: 164 --PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITF 220
             P+   L  SLE++Y G+TK+MKI+R  ++  GR   TE+ IL I IK GWK+GTKITF
Sbjct: 168 DPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITF 227

Query: 221 PEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT 280
           P++G+   + IP+D++F++ +KPH+ F+RDG +++ +  ISL EAL G TV + T+DGR 
Sbjct: 228 PKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRV 287

Query: 281 LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           + +P N VI P   + ++GEG+P PK P++RG+L ++F ++FP +LT + +  LK+ +P
Sbjct: 288 IPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
255574345	339	Protein SIS1, putative [Ricinus communis	0.979	0.979	0.830	1e-159
358349085	341	Chaperone protein dnaJ [Medicago truncat	0.988	0.982	0.809	1e-155
217073071	341	unknown [Medicago truncatula] gi|3884932	0.988	0.982	0.806	1e-154
356503348	337	PREDICTED: dnaJ homolog subfamily B memb	0.982	0.988	0.823	1e-151
356577754	337	PREDICTED: LOW QUALITY PROTEIN: dnaJ hom	0.982	0.988	0.823	1e-151
356496218	337	PREDICTED: dnaJ homolog subfamily B memb	0.982	0.988	0.820	1e-149
356568094	339	PREDICTED: dnaJ homolog subfamily B memb	0.982	0.982	0.815	1e-148
356521016	346	PREDICTED: dnaJ homolog subfamily B memb	0.991	0.971	0.8	1e-147
225439428	338	PREDICTED: dnaJ homolog subfamily B memb	0.988	0.991	0.825	1e-146
356568098	353	PREDICTED: dnaJ homolog subfamily B memb	0.982	0.943	0.783	1e-145

>gi|255574345|ref|XP_002528086.1| Protein SIS1, putative [Ricinus communis] gi|223532475|gb|EEF34265.1| Protein SIS1, putative [Ricinus communis]

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 284/342 (83%), Positives = 308/342 (90%), Gaps = 10/342 (2%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYKILQVDRNAK+++LKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDYYKILQVDRNAKDDELKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPG-ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSP 119
           QKRAVYD YGEEGLKGQMPPPG ASGF       GG T+F+FN R+ +DIFSE FGFSSP
Sbjct: 61  QKRAVYDHYGEEGLKGQMPPPGGASGF----GHDGGSTTFQFNPRSADDIFSEIFGFSSP 116

Query: 120 FG---DMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDL 176
           FG   DMGGSRAS S FPRGMFGDDIF+SF R +AGE S+   RK APIERTL CSLEDL
Sbjct: 117 FGGMGDMGGSRASTSNFPRGMFGDDIFSSF-RTAAGE-SSGPPRKGAPIERTLLCSLEDL 174

Query: 177 YKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLI 236
           YKG TKKMKISRDVID+SGRP T EEILTIEIKPGWKKGTKITFPEKGNE R VIPSDL+
Sbjct: 175 YKGITKKMKISRDVIDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLV 234

Query: 237 FIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEV 296
           FIIDEKPH +FKRDGNDL+VTQKISLVEALTGYTVQ+TT+DGR LT+PI+S+I+PTYEEV
Sbjct: 235 FIIDEKPHGVFKRDGNDLIVTQKISLVEALTGYTVQVTTVDGRNLTIPISSIITPTYEEV 294

Query: 297 IKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           +KGEGMPIPKEPSKRGNLRIKF+IKFPSKLT EQK+G+KRLI
Sbjct: 295 VKGEGMPIPKEPSKRGNLRIKFSIKFPSKLTVEQKTGIKRLI 336

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358349085|ref|XP_003638570.1| Chaperone protein dnaJ [Medicago truncatula] gi|355504505|gb|AES85708.1| Chaperone protein dnaJ [Medicago truncatula]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/341 (80%), Positives = 307/341 (90%), Gaps = 6/341 (1%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYK+LQ+DRNAK++DLKKAYRKLAMKWHPDKNPNNKKDAEAKFK ISEAYDVLSDP
Sbjct: 1   MGVDYYKVLQIDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKTISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKRAVYDQYGEEGLKGQMPPPGA G   +  G GGPT FRFN R+ +DIFSEFFGF  PF
Sbjct: 61  QKRAVYDQYGEEGLKGQMPPPGAGG--FSDGGDGGPTMFRFNPRSADDIFSEFFGFQRPF 118

Query: 121 GDMGGS---RASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLY 177
           G   G       ASGFPRGMF DD+F+SF R SAGEGSAN +RK+APIERTLPCSLEDLY
Sbjct: 119 GGGMGDMGGHPGASGFPRGMFRDDLFSSF-RNSAGEGSANVMRKSAPIERTLPCSLEDLY 177

Query: 178 KGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIF 237
           KGTTKKMKISRDV D+SG+P T EEILTIEIKPGWKKGTKITFPEKGNE R +IP+DL+F
Sbjct: 178 KGTTKKMKISRDVTDSSGKPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGLIPADLVF 237

Query: 238 IIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVI 297
           IIDEKPH++FKRDGNDLVVTQKISLVEALTGYT Q+TTLDGR LTVP+N++ISP+YEEVI
Sbjct: 238 IIDEKPHTVFKRDGNDLVVTQKISLVEALTGYTAQITTLDGRNLTVPVNTIISPSYEEVI 297

Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           KGEGMPIPKEPSK+GNLR+KFN+KFPS+LT+EQK+G+KRL+
Sbjct: 298 KGEGMPIPKEPSKKGNLRVKFNVKFPSRLTSEQKTGIKRLL 338

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073071|gb|ACJ84895.1| unknown [Medicago truncatula] gi|388493284|gb|AFK34708.1| unknown [Medicago truncatula]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 275/341 (80%), Positives = 306/341 (89%), Gaps = 6/341 (1%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYK+LQ+DRNAK++DLKKAYRKLAMKWHPDKNPNNKKDAEAKFK ISEAYDVLSDP
Sbjct: 1   MGVDYYKVLQIDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKTISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKRAVYDQYGEEGLKGQMPPPGA G   +  G GGPT FRFN R+ +DIFSEFFGF  PF
Sbjct: 61  QKRAVYDQYGEEGLKGQMPPPGAGG--FSDGGDGGPTMFRFNPRSADDIFSEFFGFQRPF 118

Query: 121 GDMGGS---RASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLY 177
           G   G       ASGFPRGMF DD+F+SF R SAGEGSAN +RK+APIERTLPCSLEDLY
Sbjct: 119 GGGMGDMGGHPGASGFPRGMFRDDLFSSF-RNSAGEGSANVMRKSAPIERTLPCSLEDLY 177

Query: 178 KGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIF 237
           KGTTKKMKISRDV D+SG+  T EEILTIEIKPGWKKGTKITFPEKGNE R +IP+DL+F
Sbjct: 178 KGTTKKMKISRDVTDSSGKSTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGLIPADLVF 237

Query: 238 IIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVI 297
           IIDEKPH++FKRDGNDLVVTQKISLVEALTGYT Q+TTLDGR LTVP+N++ISP+YEEVI
Sbjct: 238 IIDEKPHTVFKRDGNDLVVTQKISLVEALTGYTAQITTLDGRNLTVPVNTIISPSYEEVI 297

Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           KGEGMPIPKEPSK+GNLR+KFN+KFPS+LT+EQK+G+KRL+
Sbjct: 298 KGEGMPIPKEPSKKGNLRVKFNVKFPSRLTSEQKTGIKRLL 338

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503348|ref|XP_003520472.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Glycine max]

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/340 (82%), Positives = 305/340 (89%), Gaps = 7/340 (2%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYK+LQVDRNA +EDLKKAYRKLAMKWHPDKNPNNK+DAEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDYYKLLQVDRNASDEDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKR VYDQYGEEGLKGQ+PPPGA G   +G   GGPT FRFN R+ +DIFSEFFGFSSP+
Sbjct: 61  QKRGVYDQYGEEGLKGQVPPPGAGG--FSGGSDGGPTMFRFNPRSADDIFSEFFGFSSPY 118

Query: 121 G--DMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYK 178
           G  DMGG RA  SG+PR  F DD+FASF+R +AGEGS+N  RK APIE+TL CSLEDLYK
Sbjct: 119 GMGDMGG-RAGPSGYPR--FADDLFASFSRSAAGEGSSNVPRKGAPIEKTLQCSLEDLYK 175

Query: 179 GTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238
           GTTKKMKISRDVID+SGRP T EEILTIEIKPGWKKGTKITFPEKGNE R VIPSDL+FI
Sbjct: 176 GTTKKMKISRDVIDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVFI 235

Query: 239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIK 298
           IDEKPH +FKRDGNDLV+TQKISLVEALTGYT QL TLDGR LTV  NS+ISPTYEEVIK
Sbjct: 236 IDEKPHGVFKRDGNDLVITQKISLVEALTGYTAQLMTLDGRNLTVSTNSIISPTYEEVIK 295

Query: 299 GEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           GEGMPIPKEPSK+GNLRIKFNIKFPS+LT+EQK+G+KRL+
Sbjct: 296 GEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKTGIKRLL 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577754|ref|XP_003556988.1| PREDICTED: LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 13-like [Glycine max]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/340 (82%), Positives = 305/340 (89%), Gaps = 7/340 (2%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYK+LQVDRNA +EDLKKAYRKLAMKWHPDKNPNNK+DAEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDYYKLLQVDRNASDEDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKR VYDQYGEEGLKGQ+PPPGA G   +G   GGPT FRFN R+ +DIFSEFFGFSSP+
Sbjct: 61  QKRGVYDQYGEEGLKGQVPPPGAGG--FSGGSDGGPTMFRFNPRSADDIFSEFFGFSSPY 118

Query: 121 G--DMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYK 178
           G  DMGG RA  SG+PR  F DD+FASF+R +AGEGS+N  RK APIE+TL CSLEDLYK
Sbjct: 119 GMGDMGG-RAGPSGYPR--FADDLFASFSRSAAGEGSSNVPRKGAPIEKTLQCSLEDLYK 175

Query: 179 GTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238
           GTTKKMKISRDVID+SGRP T EE LTIEIKPGWKKGTKITFPEKGNE R VIPSDL+FI
Sbjct: 176 GTTKKMKISRDVIDSSGRPTTVEEXLTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVFI 235

Query: 239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIK 298
           IDEKPH +FKRDGNDLV+TQKISLVEALTGYT QLTTLDGR LTV  NS+ISPTYEEVIK
Sbjct: 236 IDEKPHGVFKRDGNDLVITQKISLVEALTGYTAQLTTLDGRNLTVSTNSIISPTYEEVIK 295

Query: 299 GEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           GEGMPIPKEPSK+GNLRIKFNIKFPS+LT+EQK+G+KRL+
Sbjct: 296 GEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKTGIKRLL 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496218|ref|XP_003516966.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Glycine max]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 279/340 (82%), Positives = 303/340 (89%), Gaps = 7/340 (2%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYK+LQVDRN  +EDLKKAYRKLAMKWHPDKNPNNK+DAEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDYYKLLQVDRNVSDEDLKKAYRKLAMKWHPDKNPNNKRDAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKR VYDQYGEEGLKGQ+PPPGA G   +G   GGPT FRFN R+ +DIFSEFFGFSSP+
Sbjct: 61  QKRGVYDQYGEEGLKGQVPPPGAGG--FSGGSDGGPTMFRFNPRSADDIFSEFFGFSSPY 118

Query: 121 G--DMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYK 178
           G  DMGG RA  SG+PR  F DD+FASF+R +AGEG  N LRK+APIE+TL CSLEDLYK
Sbjct: 119 GMGDMGG-RAGPSGYPR--FADDLFASFSRSAAGEGPGNVLRKSAPIEKTLQCSLEDLYK 175

Query: 179 GTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238
           GTTKKMKISRDVIDASGRP T EEILTIEIKPGWK+GTK+TFPEKGNE R VIPSDL+FI
Sbjct: 176 GTTKKMKISRDVIDASGRPITVEEILTIEIKPGWKRGTKVTFPEKGNEQRGVIPSDLVFI 235

Query: 239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIK 298
           IDEKPH +FKRDGNDLVVTQKISLVEALT YT QLTTLDGR LTV  NSVISP YEEVIK
Sbjct: 236 IDEKPHGVFKRDGNDLVVTQKISLVEALTSYTGQLTTLDGRNLTVSTNSVISPIYEEVIK 295

Query: 299 GEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           GEGMPIPKEPSK+GNLRIKFNIKFPS+LT+EQK+G+KRL+
Sbjct: 296 GEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKTGIKRLL 335

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568094|ref|XP_003552248.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Glycine max] gi|356568096|ref|XP_003552249.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 2 [Glycine max]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/341 (81%), Positives = 296/341 (86%), Gaps = 8/341 (2%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYKILQVDR+AK+EDLKKAYR+LAMKWHPDKNPNNKK+AEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDYYKILQVDRSAKDEDLKKAYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKR +YDQYGEEGL G  P  G       G G GGPTSFRFN R+ +DIFSEFFGFS PF
Sbjct: 61  QKRGIYDQYGEEGLNGVPPGAGGF----PGGGDGGPTSFRFNPRSADDIFSEFFGFSRPF 116

Query: 121 GDMG--GSRASASGFPRGM-FGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLY 177
           G MG  G RA  SGF RG  FG+DIFA F R +AGE   +  RK A IER LPCSLEDLY
Sbjct: 117 GGMGDMGGRAGGSGFSRGGPFGEDIFAQF-RSAAGESCGHMQRKGAAIERQLPCSLEDLY 175

Query: 178 KGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIF 237
           KGTTKKMKISRDV DASGRP+T EEILTIEIKPGWKKGTKITFPEKGNE R VIPSDL+F
Sbjct: 176 KGTTKKMKISRDVSDASGRPSTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPSDLVF 235

Query: 238 IIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVI 297
           IIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGR LT PINS ISPTYEEV+
Sbjct: 236 IIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRNLTFPINSTISPTYEEVV 295

Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           KGEGMPIPKEPSK+GNLRIKFNIKFPS+LT+EQKSG+KRL+
Sbjct: 296 KGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLL 336

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356521016|ref|XP_003529154.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Glycine max]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/345 (80%), Positives = 299/345 (86%), Gaps = 9/345 (2%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVD+YKILQVDR+AK+EDLKKAYR+LAMKWHPDKNPNNK++AEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDFYKILQVDRSAKDEDLKKAYRRLAMKWHPDKNPNNKREAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKG--QMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSS 118
           QKR VYDQYGEEGL G          G  G  +G GG TSFRFN R+ +DIFSEFFGFS 
Sbjct: 61  QKRGVYDQYGEEGLNGVPMGAGGFPGGGGGGSSGDGGATSFRFNPRSADDIFSEFFGFSR 120

Query: 119 PFG----DMGGSRASASGFPRGM-FGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSL 173
           PFG    DMGG RA  SGF RG  FG+DIFA F R +AGEGS +  RK A IER LPCSL
Sbjct: 121 PFGGGMPDMGG-RAGGSGFSRGGPFGEDIFAQF-RSAAGEGSGHMPRKGAAIERPLPCSL 178

Query: 174 EDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS 233
           EDLYKGTTKKMKISRDV DASGRP+T +EILTIEIKPGWKKGTKITFPEKGNE R VIPS
Sbjct: 179 EDLYKGTTKKMKISRDVSDASGRPSTVDEILTIEIKPGWKKGTKITFPEKGNEQRGVIPS 238

Query: 234 DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTY 293
           DL+FIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYT QLTTLDGR+LT+PINS ISPTY
Sbjct: 239 DLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRSLTIPINSTISPTY 298

Query: 294 EEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           EEV+KGEGMPIPKEPSK+GNLRIKFNIKFPS+LT+EQKSG+KRL+
Sbjct: 299 EEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLL 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439428|ref|XP_002265325.1| PREDICTED: dnaJ homolog subfamily B member 13 isoform 1 [Vitis vinifera]

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 280/339 (82%), Positives = 309/339 (91%), Gaps = 4/339 (1%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           MGVDYYKILQVDR+AK++DLKKAYRKLAMKWHPDKNPNNKK+AEAKFKQISEAYDVLSDP
Sbjct: 1   MGVDYYKILQVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKRAVYDQYGEEGLKGQ+PPPGA G   +G   GGPT FRFN R+ +DIFSEFFGFSSPF
Sbjct: 61  QKRAVYDQYGEEGLKGQVPPPGAGG--FSGGSDGGPTMFRFNPRSADDIFSEFFGFSSPF 118

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANAL-RKAAPIERTLPCSLEDLYKG 179
           GDMGGSRA  SGFPRGMF +D F+SF RG AGE S+  + RK APIER LPCSL+DLYKG
Sbjct: 119 GDMGGSRAGGSGFPRGMFSEDFFSSF-RGGAGEASSATMPRKGAPIERALPCSLDDLYKG 177

Query: 180 TTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFII 239
           T+KKMKISRDVID  GR  TTEEILTIEIKPGWKKGTKITFPEKGNE R ++PSDLIFII
Sbjct: 178 TSKKMKISRDVIDHFGRTTTTEEILTIEIKPGWKKGTKITFPEKGNEQRGIVPSDLIFII 237

Query: 240 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKG 299
           DEKPH +FKRDGNDL+ TQKISLVEALTGYTVQ+TTLDGRTLT+PINS+ISPTYEEV+KG
Sbjct: 238 DEKPHLVFKRDGNDLIFTQKISLVEALTGYTVQVTTLDGRTLTIPINSIISPTYEEVVKG 297

Query: 300 EGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           EGMPIPKEPSK+GNLRIKFNIKFP++LT+EQK+G+KRL+
Sbjct: 298 EGMPIPKEPSKKGNLRIKFNIKFPARLTSEQKTGIKRLL 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568098|ref|XP_003552250.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 3 [Glycine max]

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 278/355 (78%), Positives = 296/355 (83%), Gaps = 22/355 (6%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDV---- 56
           MGVDYYKILQVDR+AK+EDLKKAYR+LAMKWHPDKNPNNKK+AEAKFKQISEAYDV    
Sbjct: 1   MGVDYYKILQVDRSAKDEDLKKAYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYDVCQFN 60

Query: 57  ----------LSDPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNP 106
                     LSDPQKR +YDQYGEEGL G  P  G       G G GGPTSFRFN R+ 
Sbjct: 61  TYLYPFQKIVLSDPQKRGIYDQYGEEGLNGVPPGAGGF----PGGGDGGPTSFRFNPRSA 116

Query: 107 EDIFSEFFGFSSPFGDMG--GSRASASGFPRGM-FGDDIFASFNRGSAGEGSANALRKAA 163
           +DIFSEFFGFS PFG MG  G RA  SGF RG  FG+DIFA F R +AGE   +  RK A
Sbjct: 117 DDIFSEFFGFSRPFGGMGDMGGRAGGSGFSRGGPFGEDIFAQF-RSAAGESCGHMQRKGA 175

Query: 164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEK 223
            IER LPCSLEDLYKGTTKKMKISRDV DASGRP+T EEILTIEIKPGWKKGTKITFPEK
Sbjct: 176 AIERQLPCSLEDLYKGTTKKMKISRDVSDASGRPSTVEEILTIEIKPGWKKGTKITFPEK 235

Query: 224 GNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTV 283
           GNE R VIPSDL+FIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGR LT 
Sbjct: 236 GNEQRGVIPSDLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRNLTF 295

Query: 284 PINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           PINS ISPTYEEV+KGEGMPIPKEPSK+GNLRIKFNIKFPS+LT+EQKSG+KRL+
Sbjct: 296 PINSTISPTYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLL 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	339
TAIR|locus:2179127	335	AT5G01390 [Arabidopsis thalian	0.979	0.991	0.690	1.1e-121
TAIR|locus:2054809	337	AT2G20560 [Arabidopsis thalian	0.982	0.988	0.656	2.3e-117
TAIR|locus:2121368	348	AT4G28480 [Arabidopsis thalian	0.994	0.968	0.637	5.6e-116
TAIR|locus:2012743	349	AT1G10350 [Arabidopsis thalian	0.976	0.948	0.543	4.3e-93
TAIR|locus:2097880	350	AT3G47940 [Arabidopsis thalian	0.970	0.94	0.523	8.1e-92
TAIR|locus:2179429	347	AT5G25530 [Arabidopsis thalian	0.961	0.939	0.532	3.5e-91
TAIR|locus:2825170	331	AT1G59725 [Arabidopsis thalian	0.961	0.984	0.55	8.3e-90
TAIR|locus:2097638	323	AT3G08910 [Arabidopsis thalian	0.669	0.702	0.683	6.4e-83
UNIPROTKB|F1NKV0	342	DNAJB4 "Uncharacterized protei	0.979	0.970	0.444	4.9e-69
UNIPROTKB|E1BWR7	345	DNAJB5 "Uncharacterized protei	0.994	0.976	0.438	2.7e-68

TAIR|locus:2179127 AT5G01390 [Arabidopsis thaliana (taxid:3702)]

 Score = 1197 (426.4 bits), Expect = 1.1e-121, P = 1.1e-121
 Identities = 234/339 (69%), Positives = 270/339 (79%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
             MGVD+YK+L+VDR+A +++LKKAYRKLAMKWHPDKNPNNKK+AEAKFKQISEAYDVLSDP
Sbjct:     1 MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXX 120
             QKRA+Y+QYGEEGL                       SFRFN R+ +DI           
Sbjct:    61 QKRAIYEQYGEEGLN---QAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPS 117

Query:   121 XDMGG-SRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKG 179
                G  SRA  SGF    +GDDIFASF   + G  ++   RK+APIER LPCSLEDLYKG
Sbjct:   118 FGTGSDSRAGPSGF---RYGDDIFASFRAATTGGEASIPSRKSAPIERQLPCSLEDLYKG 174

Query:   180 TTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFII 239
              +KKMKISRDV+D+SGRP   EEILTIEIKPGWKKGTKITF EKGNE R VIPSDL+FI+
Sbjct:   175 VSKKMKISRDVLDSSGRPTPVEEILTIEIKPGWKKGTKITFLEKGNEHRGVIPSDLVFIV 234

Query:   240 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKG 299
             DEKPH +FKRDGNDLVV QKISLV+ALTGYT Q+TTLDGRTLTVP+N+VISP+YEEV+KG
Sbjct:   235 DEKPHPVFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRTLTVPVNNVISPSYEEVVKG 294

Query:   300 EGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
             EGMPIPK+PS++GNLRI+F IKFPSKLTTEQKSG+KR++
Sbjct:   295 EGMPIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRML 333

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2054809 AT2G20560 [Arabidopsis thaliana (taxid:3702)]

 Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
 Identities = 224/341 (65%), Positives = 261/341 (76%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
             MGVDYYK+LQVDR+A ++DLKKAYRKLAMKWHPDKNPNNKKDAEA FKQISEAY+VLSDP
Sbjct:     1 MGVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKDAEAMFKQISEAYEVLSDP 60

Query:    61 QKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXX 120
             QK+AVYDQYGEEGLKG +                  TSFRFN RN +DI           
Sbjct:    61 QKKAVYDQYGEEGLKGNVPPPDAGGATYFSTGDGP-TSFRFNPRNADDIFAEFFGFSS-- 117

Query:   121 XDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSA---NALRKAAPIERTLPCSLEDLY 177
                GG R     F   MFGD++FASF  G  G G +      RKAAPIE  LPCSLEDLY
Sbjct:   118 -PFGGGRGGTR-FSSSMFGDNMFASFGEGGGGGGGSMHHGGARKAAPIENKLPCSLEDLY 175

Query:   178 KGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIF 237
             KGTTKKM+ISR++ D SG+    EEILTI++KPGWKKGTKITFPEKGNE   VIP+DL+F
Sbjct:   176 KGTTKKMRISREIADVSGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPGVIPADLVF 235

Query:   238 IIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVI 297
             IIDEKPH +F R+GNDL+VTQKISLVEALTGYTV LTTLDGR LT+P+ +V+ P YEEV+
Sbjct:   236 IIDEKPHPVFTREGNDLIVTQKISLVEALTGYTVNLTTLDGRRLTIPVTNVVHPEYEEVV 295

Query:   298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
               EGMP+ K+ +KRGNLRIKFNIKFP++LT+EQK+G+K+L+
Sbjct:   296 PKEGMPLQKDQTKRGNLRIKFNIKFPTRLTSEQKTGVKKLL 336

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS;RCA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2121368 AT4G28480 [Arabidopsis thaliana (taxid:3702)]

 Score = 1143 (407.4 bits), Expect = 5.6e-116, P = 5.6e-116
 Identities = 222/348 (63%), Positives = 259/348 (74%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
             MGVDYYK+LQVDR+A ++DLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP
Sbjct:     1 MGVDYYKVLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAVYDQYGEEGLKGQMXX-XXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXX 119
             QKRAVYDQYGEEGLKG +                   +SFRFN R+ +DI          
Sbjct:    61 QKRAVYDQYGEEGLKGNVPPPNAATSGASYFSTGDGSSSFRFNPRSADDIFAEFFGFSTP 120

Query:   120 XXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSAN---------ALRKAAPIERTLP 170
                 GG       F   MFGDD++ASF  G+ G G+ +         A RK APIE  LP
Sbjct:   121 FGG-GGGGTGGQRFASRMFGDDMYASFGEGAGGGGAMHHHHHHHHHAAARKVAPIENKLP 179

Query:   171 CSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV 230
             CSLEDLYKGTTKKMKISR+++D SG+    EEILTI +KPGWKKGTKITFPEKGNE   V
Sbjct:   180 CSLEDLYKGTTKKMKISREIVDVSGKAMQVEEILTIGVKPGWKKGTKITFPEKGNEHPGV 239

Query:   231 IPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVIS 290
             IP+DL+FIIDEKPH +F R+GNDL+VTQK+SL +ALTGYT  + TLDGRTLT+PI +VI 
Sbjct:   240 IPADLVFIIDEKPHPVFTREGNDLIVTQKVSLADALTGYTANIATLDGRTLTIPITNVIH 299

Query:   291 PTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
             P YEEV+  EGMP+ K+ +K+GNLRIKFNIKFP++LT EQK+G K+LI
Sbjct:   300 PEYEEVVPKEGMPLQKDQTKKGNLRIKFNIKFPARLTAEQKAGFKKLI 347

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2012743 AT1G10350 [Arabidopsis thaliana (taxid:3702)]

 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 192/353 (54%), Positives = 238/353 (67%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
             MGVDYY +L+V+RNA E+DLKK+YR++AMKWHPDKNP +KK+AEAKFKQISEAYDVLSDP
Sbjct:     1 MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTSKKEAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAVYDQYGEEGLKGQ--MXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXX 118
             Q+R +YDQYGEEGLK                       + FR+  R+ EDI         
Sbjct:    61 QRRQIYDQYGEEGLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPRDAEDIFAEFFGESG 120

Query:   119 XXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSAN-------------ALRKAAPI 165
                  GGS    SG  RG  GD     F    AG   AN             A RKA  I
Sbjct:   121 DAFG-GGS----SGRTRGDGGDGGGRRFKSAEAGS-QANRKTPPTNKKTTPPANRKAPAI 174

Query:   166 ERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGN 225
             E  L C+LE+LYKG  KKM+ISR V D  G+P T +EIL I+IKPGWKKGTKITFPEKGN
Sbjct:   175 ESKLACTLEELYKGAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKGN 234

Query:   226 ELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPI 285
             +   V P+DLIF++DEKPHS+FKRDGNDL++ +K+SL++ALTG T+ +TTLDGR+LT+P+
Sbjct:   235 QEPGVTPADLIFVVDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRSLTIPV 294

Query:   286 NSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
               ++ P  E VI  EGMP  K+P KRG+LR+ F I FPS+LT+EQK+ LKR++
Sbjct:   295 LDIVKPGQEIVIPNEGMPT-KDPLKRGDLRVTFEILFPSRLTSEQKNDLKRVL 346

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2097880 AT3G47940 [Arabidopsis thaliana (taxid:3702)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 186/355 (52%), Positives = 241/355 (67%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKD-AEAKFKQISEAYDVLSD 59
             MGVDYY IL+V+ NA E+DLKKAY++LAM WHPDKNP+ ++D AEAKFK+ISEAYDVLSD
Sbjct:     1 MGVDYYNILKVNHNATEDDLKKAYKRLAMIWHPDKNPSTRRDEAEAKFKRISEAYDVLSD 60

Query:    60 PQKRAVYDQYGEEGLK-GQMXXXXXXXXXXXXXXXXX---------------XTSFRFNT 103
             PQKR +YD YGEEGLK G++                                 +SFRFN 
Sbjct:    61 PQKRQIYDLYGEEGLKSGKIPNSSSSEASSSSSSSSSRYPHFHQHRPQHPPNASSFRFNP 120

Query:   104 RNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAA 163
             R+ EDI            + GG   +A G     F +     FN G A  G +  +RK  
Sbjct:   121 RDAEDIYAEFFGS-----ENGGGSNNAGGRGNRAFRN---GHFNTGGAN-GYSGEMRKVP 171

Query:   164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEK 223
              +E  LP SLEDLYKG  KKM+I+R+V DASGR     EIL IEIKPGWKKGTK+TFP+K
Sbjct:   172 AMENPLPVSLEDLYKGVVKKMRITRNVYDASGRMMVEAEILPIEIKPGWKKGTKLTFPKK 231

Query:   224 GNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTV 283
             GNE   +IP+D++F+++EKPH ++KRDGNDL+V+Q+I+L+EALTG TV L TLDGRTL +
Sbjct:   232 GNEEPGIIPADIVFVVEEKPHPVYKRDGNDLLVSQEITLLEALTGKTVNLITLDGRTLMI 291

Query:   284 PINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
             P+  +I P +E V+  EGMPI KEP K+GNL++K ++K+PS+LT++QK  LKR++
Sbjct:   292 PLTEIIKPDHEIVVPNEGMPISKEPGKKGNLKLKLSVKYPSRLTSDQKFELKRVL 346

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2179429 AT5G25530 [Arabidopsis thaliana (taxid:3702)]

 Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
 Identities = 190/357 (53%), Positives = 235/357 (65%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYD----- 55
             MG+DYY IL+V+RNA E+DLKK+YRKLAMKWHPDKNPN K +AEAKFKQISEAY+     
Sbjct:     1 MGLDYYDILKVNRNATEDDLKKSYRKLAMKWHPDKNPNTKTEAEAKFKQISEAYEAKYEV 60

Query:    56 ---VLSDPQKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXX 112
                VLSDPQKRAVYDQYGEEGL                          FN RN EDI   
Sbjct:    61 MFQVLSDPQKRAVYDQYGEEGLSDMPPPGSTGNNGRAGG---------FNPRNAEDIFAE 111

Query:   113 XXXXXXXXXDMGGSRASASGFPR----GMFGDDIFASFNRGSAG-------EGSANALRK 161
                         G    +  F      GMFG   F   N GS         EG+  A +K
Sbjct:   112 FFGSSPFGFGSAGGPGRSMRFQSDGGGGMFGG--FGGGNNGSENNIFRTYSEGTP-APKK 168

Query:   162 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFP 221
               P+E  LPCSLE+LY G+T+KMKISR ++DA+GR     EILTI +KPGWKKGTKI FP
Sbjct:   169 PPPVESKLPCSLEELYSGSTRKMKISRSIVDANGRQAQETEILTIVVKPGWKKGTKIKFP 228

Query:   222 EKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTL 281
             +KGNE  N +P+DL+F+IDEKPH LF RDGNDL+ +++++L EA+ G TV + TLDGR L
Sbjct:   229 DKGNEQVNQLPADLVFVIDEKPHDLFTRDGNDLITSRRVTLAEAIGGTTVNINTLDGRNL 288

Query:   282 TVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
              V +  ++SP YE V+ GEGMPI KEP  +G+L+IKF+++FP++LTTEQKS LKR++
Sbjct:   289 PVGVAEIVSPGYEFVVPGEGMPIAKEPRNKGDLKIKFDVQFPARLTTEQKSALKRVL 345

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2825170 AT1G59725 [Arabidopsis thaliana (taxid:3702)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 187/340 (55%), Positives = 228/340 (67%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-KKDAEAKFKQISEAYDVLSD 59
             MGVDYY +L V+ +A E+DLKK+YR+LAMKWHPDKNP + K++AEAKFKQISEAYDVLSD
Sbjct:     1 MGVDYYNVLNVNPSATEDDLKKSYRRLAMKWHPDKNPTSIKQEAEAKFKQISEAYDVLSD 60

Query:    60 PQKRAVYDQYGEEGLKG-QMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXX 118
             P KR +YDQYGE+GL   +                     FR+  R+ EDI         
Sbjct:    61 PNKRQIYDQYGEDGLTATEATASSQQHNYSSGNNNNYNAGFRYYPRDAEDIFA------- 113

Query:   119 XXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYK 178
                +  G  AS   F  G+ G   F S   GS         RKA  IE  L C+LE+LYK
Sbjct:   114 ---EFFG--ASEKVFDGGVGGGGRFKSAEAGSQTNRKTPVNRKAPAIESKLACTLEELYK 168

Query:   179 GTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI 238
             G  +KMKISR V D  G+    EEIL I+I PGWKKGTKITFPEKGN+   V P+DLIF+
Sbjct:   169 GGRRKMKISRVVPDGLGKSKPVEEILKIDITPGWKKGTKITFPEKGNQEPGVTPADLIFV 228

Query:   239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIK 298
             IDEKPHS++KRDGNDL+V +K+SL+EALTG T+ LTTLDGR LT+P+  ++ P  E VI 
Sbjct:   229 IDEKPHSVYKRDGNDLIVDKKVSLLEALTGITLSLTTLDGRNLTIPVLDIVKPGQEIVIP 288

Query:   299 GEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
              EGMPI KE SKRG+LRI F I FPS+LT+EQK+ LKR++
Sbjct:   289 SEGMPISKEGSKRGDLRINFEICFPSRLTSEQKTDLKRVL 328

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2097638 AT3G08910 [Arabidopsis thaliana (taxid:3702)]

 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 164/240 (68%), Positives = 194/240 (80%)

Query:    98 SFRFNTRNPEDIXXXXXXXXXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSAN 157
             SFRFN R+ +DI            D  G+  S +GF    F +D+F+S         +  
Sbjct:    93 SFRFNGRSADDIFSEFFGFTRPFGDSRGAGPS-NGF---RFAEDVFSS---------NVV 139

Query:   158 ALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTK 217
               RKAAPIER LPCSLEDLYKG +KKMKISRDV+D+SGRP T EEILTIEIKPGWKKGTK
Sbjct:   140 PPRKAAPIERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTTVEEILTIEIKPGWKKGTK 199

Query:   218 ITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLD 277
             ITFPEKGNE R +IPSDL+FI+DEKPH++FKRDGNDLV+TQKI LVEALTGYT Q++TLD
Sbjct:   200 ITFPEKGNEQRGIIPSDLVFIVDEKPHAVFKRDGNDLVMTQKIPLVEALTGYTAQVSTLD 259

Query:   278 GRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
             GR++TVPIN+VISP+YEEV+KGEGMPIPK+PSK+GNLRIKF +KFPS+LTTEQKSG+KR+
Sbjct:   260 GRSVTVPINNVISPSYEEVVKGEGMPIPKDPSKKGNLRIKFTVKFPSRLTTEQKSGIKRM 319

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|F1NKV0 DNAJB4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 153/344 (44%), Positives = 205/344 (59%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
             MG DYY IL +++ A EED+KKAYRK A+KWHPDKN +    AE KFK+I+EAY+VLSDP
Sbjct:     4 MGKDYYSILGIEKGASEEDIKKAYRKQALKWHPDKNKS--AHAEEKFKEIAEAYEVLSDP 61

Query:    61 QKRAVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXX-XTSFR--FNTRNPEDIXXXXXX-X 116
             +KR +YDQYGEEGLKG                      +F   F   NP +I        
Sbjct:    62 KKRDIYDQYGEEGLKGGAGGPDGQGGTFRYSFHGDPHATFAAFFGGTNPFEIFFGRRMPG 121

Query:   117 XXXXXDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDL 176
                  DM        G P G F       F R     GS    ++  P+   L  SLE++
Sbjct:   122 GRDTEDM-----EVDGDPFGSFTSFSMNGFPRERNTVGSQIRRKQDPPVIHELKVSLEEI 176

Query:   177 YKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRNVIPSDL 235
             Y G TK+M+ISR  ++  GR   TE+ ILTIEIK GWK+GTKITFP++G+E  N IP+D+
Sbjct:   177 YHGCTKRMRISRKRLNPDGRSVRTEDKILTIEIKRGWKEGTKITFPKEGDETPNTIPADI 236

Query:   236 IFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEE 295
             +FII +KPHS FKRDG+++V   KISL EAL G ++ + T++GRT+ + +N V+ P    
Sbjct:   237 VFIIKDKPHSHFKRDGSNIVYPVKISLREALCGSSINVPTIEGRTIPMTVNEVVKPGMRR 296

Query:   296 VIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
              I G G+P PK P +RG+L I+F + FP  ++   K  L+R +P
Sbjct:   297 RIIGYGLPFPKNPDQRGDLIIEFEVIFPDNISPASKEVLRRNLP 340

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|E1BWR7 DNAJB5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 152/347 (43%), Positives = 208/347 (59%)

Query:     1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
             MG DYYKIL +   A E+++KKAYRK+A+K+HPDKN +   +AE KFK+I+EAYDVLSDP
Sbjct:     1 MGKDYYKILGIQSGANEDEIKKAYRKMALKYHPDKNKD--PNAEEKFKEIAEAYDVLSDP 58

Query:    61 QKRAVYDQYGEEGLK-GQMXXXXXXXXXXXXXXXXXXTSFR--FNTRNPEDIXXXXXXXX 117
             +KRAVYDQYGEEGLK G                     +F   F   NP DI        
Sbjct:    59 KKRAVYDQYGEEGLKTGGGSSGGSGNTFHYTFHGDPHATFASFFGGSNPFDIFFASSRSR 118

Query:   118 XXXX-DMGGSRASASGFPRGMFGDDIFASFNR-GSAGEGSANALRKAA--PIERTLPCSL 173
                  D           P   FG   F   N      + S +  RK    P+   L  SL
Sbjct:   119 MFNGFDQEDMDIDDDDDPFSAFGRFGFNGINGVHRRHQESLHTRRKVQDPPVIHELKVSL 178

Query:   174 EDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPEKGNELRNVIP 232
             E++Y G+TK+MKI+R  ++  GR   TE+ IL I IK GWK+GTKITFP++G+   + IP
Sbjct:   179 EEIYHGSTKRMKITRRRLNPDGRTMRTEDKILNIVIKRGWKEGTKITFPKEGDATPDNIP 238

Query:   233 SDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPT 292
             +D++FI+ +KPHS FKRDG ++V T  ISL EAL G TV + T+DGR + +P N +I P 
Sbjct:   239 ADIVFILKDKPHSHFKRDGTNVVYTANISLKEALCGCTVNIPTIDGRVIPLPCNDIIKPG 298

Query:   293 YEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
               + ++GEG+P PK PS+RG+L ++F I+FP ++  + +  LK+ +P
Sbjct:   299 TVKRLRGEGLPFPKAPSQRGDLIVEFKIRFPDRIAPQTRQILKQHLP 345

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006986 "response to unfolded protein" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B9MJZ0	DNAJ_CALBD	No assigned EC number	0.328	0.9380	0.8195	yes	no
Q3MI00	DNJB1_BOVIN	No assigned EC number	0.4371	0.9675	0.9647	yes	no
Q9UDY4	DNJB4_HUMAN	No assigned EC number	0.4501	0.9528	0.9584	yes	no
Q24133	DNAJ1_DROME	No assigned EC number	0.4527	0.9528	0.9670	yes	no
B8I304	DNAJ_CLOCE	No assigned EC number	0.3297	0.9351	0.8364	yes	no
B9KH92	DNAJ_ANAMF	No assigned EC number	0.3027	0.9262	0.8284	yes	no
A9IGC5	DNAJ_BORPD	No assigned EC number	0.3205	0.9203	0.8342	yes	no
Q5R8J8	DNJB4_PONAB	No assigned EC number	0.4501	0.9528	0.9584	yes	no
P25294	SIS1_YEAST	No assigned EC number	0.3742	0.9439	0.9090	yes	no
Q5P9E0	DNAJ_ANAMM	No assigned EC number	0.3027	0.9262	0.8284	yes	no
Q80Y75	DJB13_MOUSE	No assigned EC number	0.4454	0.9233	0.9905	yes	no
Q97BG9	DNAJ_THEVO	No assigned EC number	0.3074	0.9380	0.8712	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00038888001	SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (338 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.485
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.484
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)			•						0.481
	GSVIVG00024357001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (652 aa)			•						0.479
	GSVIVG00018481001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (650 aa)			•						0.479
	GSVIVG00018506001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (649 aa)			•						0.478
	GSVIVG00024351001	SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (648 aa)			•						0.477
	GSVIVG00021301001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (649 aa)			•						0.477
	GSVIVG00022731001	SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (655 aa)			•						0.476
	GSVIVG00019978001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (574 aa)			•						0.476

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	339
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	3e-64
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	9e-59
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	1e-56
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	4e-51
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	7e-49
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	2e-48
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	6e-47
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	3e-46
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	6e-46
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	5e-43
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	4e-41
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	9e-39
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	6e-38
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	1e-37
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	1e-37
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	3e-37
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	5e-37
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	5e-36
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	1e-35
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	1e-32
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-32
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	9e-32
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	1e-31
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	1e-31
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	2e-31
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	5e-31
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	2e-30
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	2e-29
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	3e-29
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	5e-29
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	1e-28
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	3e-28
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	4e-28
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	7e-27
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-26
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	1e-25
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	4e-25
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	3e-24
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	4e-21
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	2e-20
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	7e-17
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	2e-13
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	2e-13
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-12
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	2e-11
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	3e-11
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	2e-10
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	1e-09
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	4e-09
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	3e-07
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	8e-07
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	6e-05
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	4e-04
PRK03578	176	PRK03578, hscB, co-chaperone HscB; Provisional	0.001
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	0.001
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	0.001
PHA03102	153	PHA03102, PHA03102, Small T antigen; Reviewed	0.002
PRK01356	166	PRK01356, hscB, co-chaperone HscB; Provisional	0.004

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  208 bits (532), Expect = 3e-64
 Identities = 134/357 (37%), Positives = 184/357 (51%), Gaps = 43/357 (12%)

Query: 5   YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
            Y++L + ++    ++KKAYRKLA+K HPDK      D E KFK+IS AY+VLSDP+KR 
Sbjct: 30  LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG----GDPE-KFKEISRAYEVLSDPEKRK 84

Query: 65  VYDQYGEEGLKGQMPPPGASG----FPGAGAGAGGPTSFRFNTRNPEDIFSE-------- 112
           +YD+YGEEGL+G   P  AS       G G   GG        +  EDI S         
Sbjct: 85  IYDEYGEEGLEGGEQPADASDLFDLIFGGGRKPGG-------KKRGEDIVSHLKVTLEQI 137

Query: 113 FFGFSSPFG---DMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPI--ER 167
           + G         D+  +     G P+  F D       +   G+G    +R+   +  + 
Sbjct: 138 YNGAMRKLAINKDVICANCEGHGGPKDAFVD------CKLCNGQGIRVQIRQMGSMIHQT 191

Query: 168 TLPCSLEDLYKGTTKKMKISRDVIDASGR-PNTTEEILTIEIKPGWKKGTKITFPEKGNE 226
              C+      G  K +  S+   + SG+    T +IL + I  G     KITF  + +E
Sbjct: 192 QSTCNS---CNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADE 248

Query: 227 LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTV--P 284
             N IP +++FI++EKPH  FKR+G DL +T+KISL EALTG+   +T LDGR L V  P
Sbjct: 249 KPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTP 308

Query: 285 INSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPS--KLTTEQKSGLKRLIP 339
              V+ P   +VI  EGMP  K P K+GNL + F + FP   K T E+K  LK L P
Sbjct: 309 PGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFP 365

Length = 421

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  193 bits (493), Expect = 9e-59
 Identities = 121/400 (30%), Positives = 164/400 (41%), Gaps = 125/400 (31%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L V RNA E+++KKAYRKLAMK+HPD+NP +K +AE KFK+I EAY+VLSDPQKR
Sbjct: 5   DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKR 63

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQYG    +            G G G GG   F        DIF + FG    FG  
Sbjct: 64  AAYDQYGHAAFEQG----------GGGGGFGGGGGF-------GDIFGDIFG--DIFGGG 104

Query: 124 GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK 183
            G         R   G D                 LR    I      +LE+  +G TK+
Sbjct: 105 RGGGRQ-----RARRGAD-----------------LRYNMEI------TLEEAVRGVTKE 136

Query: 184 MKISR----DVIDASG-RPNTTEE----------------ILTIE--------------- 207
           ++I      D    SG +P T+ +                  T++               
Sbjct: 137 IRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKD 196

Query: 208 --------------------IKPGWKKGTKITFPEKGNE-LRNVIPSDL-IFIIDEKPHS 245
                               I  G   G +I    +G    R     DL + I   K H 
Sbjct: 197 PCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIH-VKEHP 255

Query: 246 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEE-------VI 297
           +F+RDGNDL     IS   A  G  +++ TLDGR  L +P         E         +
Sbjct: 256 IFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIP---------EGTQTGKLFRL 306

Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
           +G+G+   +    RG+L  +  ++ P  LT  QK  L+  
Sbjct: 307 RGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEF 345

Length = 371

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  188 bits (478), Expect = 1e-56
 Identities = 114/381 (29%), Positives = 166/381 (43%), Gaps = 96/381 (25%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL V RNA +E++KKAYR+LA K+HPD N N   +AE KFK+I+EAY VLSDP+KR
Sbjct: 4   DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKR 61

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEF---FGFSSPF 120
            +YDQ+G     G                 G      F   N EDI  +    FGF   F
Sbjct: 62  KLYDQFGHAAFSGSG-----------QQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIF 110

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
           G    +R     + R + G+DI+                       +T+  SLE+ Y GT
Sbjct: 111 GRRRATRERRKTYQRPVKGEDIY-----------------------QTVEISLEEAYTGT 147

Query: 181 TKKMKISRDVI-DASG----RPNTTEEI-------------------------------- 203
           T  +++ R V  +A G     P + E++                                
Sbjct: 148 TVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL 207

Query: 204 ------------------LTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIFIIDEKPH 244
                             + + I PG   G+K+  P KG+  R    P DL  I+  KPH
Sbjct: 208 REPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPH 267

Query: 245 SLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPI 304
            LF+R G++L +   I++ EA+ G  +++  LDG+   V I        +  + G+GMP 
Sbjct: 268 PLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPR 327

Query: 305 PKEPSKRGNLRIKFNIKFPSK 325
            K  S  G+L ++ +I  P  
Sbjct: 328 LKG-SGYGDLVVRVHIDVPKI 347

Length = 382

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  166 bits (423), Expect = 4e-51
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 8/165 (4%)

Query: 163 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPE 222
           A +   L  +LE+ Y G  K++KI R V          ++ LT++I  G   G ++    
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVT-----RVREKKTLTVKIPAGVDDGQRLRLRG 55

Query: 223 KGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTL 281
           +G+       P DL  +I  KPH +F+RDGNDL     ISL EAL G  +++ TL G  +
Sbjct: 56  EGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGG-KV 114

Query: 282 TVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKL 326
            + I     P     +KG+GMP  +    RG+L ++  ++FP KL
Sbjct: 115 KLKIPPGTQPGTVLRLKGKGMPRLR-GGGRGDLYVEVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  168 bits (426), Expect = 7e-49
 Identities = 121/377 (32%), Positives = 171/377 (45%), Gaps = 63/377 (16%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL VDRNA EE++KKAYR+LA K+HPD NP + K+AE KFK+I+EAY++LSDPQKR
Sbjct: 6   DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKR 64

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQ+G          PG  G  G G G  G   F F+     DIF +       FGD 
Sbjct: 65  AQYDQFGHAAFD-----PGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDI------FGDF 113

Query: 124 -GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSL--------- 173
            G  R  A   P+   G DI          E +A    K   +ER   C +         
Sbjct: 114 FGTGRRRAETGPQK--GADIRYDLE--LTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPG 169

Query: 174 -------------------------------EDLYKGTTKKMKISRDVIDASGRPNTTEE 202
                                           D   G  K +    +    +GR     +
Sbjct: 170 SKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRK 229

Query: 203 ILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKIS 261
           I  + I  G   G  IT   +G   ++     DL  +I  KPH LFKR+G ++ +   I+
Sbjct: 230 I-KVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPIT 288

Query: 262 LVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI 320
             +A  G  +++ TLDG+   T+P  +     +   ++G+G+P  +    RG+  +K  I
Sbjct: 289 FTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFR--LRGKGIPHLRG-RGRGDQIVKVYI 345

Query: 321 KFPSKLTTEQKSGLKRL 337
           + P KLT +QK  L+  
Sbjct: 346 EVPKKLTEKQKELLREF 362

Length = 386

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  166 bits (422), Expect = 2e-48
 Identities = 72/191 (37%), Positives = 97/191 (50%), Gaps = 48/191 (25%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
              DYY+IL V ++A EE++KKAYRKLA K+HPD+NP + K+AE KFK+I+EAY+VLSDP
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD-KEAEEKFKEINEAYEVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           +KRA YDQ+G  G K         GF G G G  G         +  DIF +FFG     
Sbjct: 61  EKRAAYDQFGHAGFKA-------GGFGGFGFGGFGG--------DFGDIFEDFFG----- 100

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
              GG                          G    N  R+ A +   L  +LE+   G 
Sbjct: 101 ---GGGG------------------------GRRRPNRPRRGADLRYNLEITLEEAVFGV 133

Query: 181 TKKMKISRDVI 191
            K+++++R V 
Sbjct: 134 KKEIRVTRSVT 144

Length = 371

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  163 bits (413), Expect = 6e-47
 Identities = 126/400 (31%), Positives = 185/400 (46%), Gaps = 94/400 (23%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           M  DYY++L V R+A ++++KKAYRKLA+K+HPDKNP+N K+AE  FK+++EAY+VLS+ 
Sbjct: 1   MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSND 59

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAG-AGGPTSFRFNTRNPEDIFSEFFGFSSP 119
            KR  YDQ+G  G+       G+S   G G G  GG   F        DIF       S 
Sbjct: 60  DKRRRYDQFGHAGV-------GSSAASGGGPGYGGGGGDF-------NDIF-------SA 98

Query: 120 FGDM-GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYK 178
           F DM GG      G P G   +D+F     G      A+A      ++  L  +LE++ K
Sbjct: 99  FNDMFGGGARRGGGSPFGF--EDVFG----GGGRRRRASAGIPGTDLKIRLKLTLEEIAK 152

Query: 179 GTTKKMKISRDVI----DASGRPNTTEEI---------------------LTIEIKP--- 210
           G  K +KI + V     + +G      E                      + I   P   
Sbjct: 153 GVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCG 212

Query: 211 ----------------GWKKG---TKITFP---EKGNEL----------RNVIPSDLIFI 238
                           G K+G    K+T P   + GN L          R   P DLI +
Sbjct: 213 GEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVV 272

Query: 239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVI 297
           I+EKPH LF R+G+D++    +S  + + G  V++ TLDG   LT+P  +   P     I
Sbjct: 273 IEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAGT--QPETMLRI 330

Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
            G+G+   +    RG+  ++ N+  P +++ + K  LK L
Sbjct: 331 PGKGIGHLRGSG-RGDQYVRVNVFVPKEVSHQDKELLKEL 369

Length = 397

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  160 bits (407), Expect = 3e-46
 Identities = 119/375 (31%), Positives = 179/375 (47%), Gaps = 70/375 (18%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L VDRNA ++++KKAYRKLA K+HPD +   ++ AE KFK+ISEAY VLSD +KR
Sbjct: 6   DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS--EEEGAEEKFKEISEAYAVLSDDEKR 63

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEF-FGFSSPFGD 122
             YDQ+G  G+          GF              FN  N EDIF  F FG  + F D
Sbjct: 64  QRYDQFGHAGM---------DGFSQEDI---------FNNINFEDIFQGFGFGIGNIF-D 104

Query: 123 MGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYK---- 178
           M G    +   P+   G DI+         E +A+ + K   +  T  C + +  +    
Sbjct: 105 MFGFGGGSRHGPQR--GADIYTEVE--ITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPG 160

Query: 179 ---------GTTKKMKISRDVI-------------------------DASGRPNTTE-EI 203
                    G T ++K  R+ I                         +  G+    E + 
Sbjct: 161 SEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKT 220

Query: 204 LTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISL 262
           ++++I  G + G+++    +G    R   P DL  +I  KPH +F+R+G +L   + IS 
Sbjct: 221 ISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISF 280

Query: 263 VEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 321
           V+A  G TV + T+DG   L +P  +    T+   +KG GMP  +  S +GNL +K  + 
Sbjct: 281 VQAALGDTVDVPTIDGPVELKIPAGTQSGTTFR--LKGHGMPSLRW-SGKGNLYVKVKVV 337

Query: 322 FPSKLTTEQKSGLKR 336
            P KL+ +QK  L+ 
Sbjct: 338 VPKKLSPKQKELLRE 352

Length = 378

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  159 bits (404), Expect = 6e-46
 Identities = 71/187 (37%), Positives = 93/187 (49%), Gaps = 43/187 (22%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL V ++A EE++KKAYRKLA K+HPD+N +  K+AE KFK+I+EAY+VLSDP+KR
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKR 58

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQ+G  G  G     G  G    G   G    F        DIF +FFG     G  
Sbjct: 59  AQYDQFGHAGFNGGG---GGGGGGFNGFDIGFFGDF-------GDIFGDFFG-----GGG 103

Query: 124 GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK 183
           G  R   SG  R   G+D+                          L  + E+   G  K+
Sbjct: 104 GSGRRRRSGPRR---GEDLRY-----------------------DLELTFEEAVFGVEKE 137

Query: 184 MKISRDV 190
           ++I R  
Sbjct: 138 IEIPRKE 144

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  150 bits (379), Expect = 5e-43
 Identities = 111/340 (32%), Positives = 163/340 (47%), Gaps = 67/340 (19%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY IL V +NA ++++KKA++KLA K+HPD   N    AE KFK+I+EAY VLSDP+KR
Sbjct: 5   DYYAILGVPKNASQDEIKKAFKKLARKYHPDV--NKSPGAEEKFKEINEAYTVLSDPEKR 62

Query: 64  AVYDQYGEEGLKG--QMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFG 121
            +YD YG        Q PPPG    P  G    G     FN  +  D F + FG    FG
Sbjct: 63  RIYDTYGTTAASAGWQGPPPG----PPGGGDFSG-----FNVGDFSDFFQQLFGGRGGFG 113

Query: 122 DMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTT 181
             G                D+F S  R +         RK   +E  LP +LE+ Y+G  
Sbjct: 114 GFG----------------DLFGSVGRRA---------RKGRDLEAELPLTLEEAYRGGE 148

Query: 182 KKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDE 241
           K ++++              E L++ I PG ++G  I    KG +       DL  ++  
Sbjct: 149 KVVEVA-------------GERLSVRIPPGVREGQVIRLAGKGRQ-----GGDLYLVVRL 190

Query: 242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEE----VI 297
            PH +F+ +G+DL  T  +    A+ G  V++ TLDG     P+   I P  +      +
Sbjct: 191 LPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDG-----PVEVTIPPRTQAGRKLRL 245

Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
           KG+G   P+ P+ RG+   +  I  P++ T E++   K+L
Sbjct: 246 KGKGW--PRGPAGRGDQYAEVRITIPTRPTPEEERLYKQL 283

Length = 291

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  147 bits (372), Expect = 4e-41
 Identities = 116/382 (30%), Positives = 168/382 (43%), Gaps = 85/382 (22%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           +YY  L V ++A ++++KKAYRKL+ K+HPD N   +  AE K+K++ EAY+ LSDPQKR
Sbjct: 5   EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN--KEPGAEEKYKEVQEAYETLSDPQKR 62

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNP----EDIFSEFFGFSSP 119
           A YDQYG  G  G        GF G   G GG     F+        EDIFS FFG    
Sbjct: 63  AAYDQYGAAGANG--------GFGGGAGGFGG-----FDGSGGFGGFEDIFSSFFG---- 105

Query: 120 FGDMGGSRASASG--------------FPRGMFGDDIFASFNR--------GSA------ 151
               GG+R + +               F   +FG +   S+NR        GS       
Sbjct: 106 ---GGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTS 162

Query: 152 --------GEGSANALRKAA--PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTE 201
                   G G      +     + R + C   D+  GT K++K        +G     +
Sbjct: 163 PVTCGKCHGSGVITVDTQTPLGMMRRQVTC---DVCHGTGKEIKEPCQTCHGTG---HEK 216

Query: 202 EILTIEIK--PGWKKGTKITFPEKGNELRNVIP-SDLIFIIDEKPHSLFKRDGNDLVVTQ 258
           +  T+ +K   G + G +I    +G    N  P  DL  +   +P   F+RDG+ +  T 
Sbjct: 217 QAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTL 276

Query: 259 KISLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGN---- 313
            IS V+A  G TV++ T+ G   L +P  +     +   ++G+G      P  RG     
Sbjct: 277 PISFVQAALGDTVEVPTVHGDVELKIPAGTQTGKKFR--LRGKGA-----PKLRGGGNGD 329

Query: 314 LRIKFNIKFPSKLTTEQKSGLK 335
             +  NI  P+KL   QK  LK
Sbjct: 330 QHVTVNIVTPTKLNDAQKEALK 351

Length = 380

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  140 bits (355), Expect = 9e-39
 Identities = 113/361 (31%), Positives = 167/361 (46%), Gaps = 52/361 (14%)

Query: 5   YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
           YY IL V ++A +E++K AYRKLA+K+HPDKN  N K++E KFK+ +EAY++L DP+KR 
Sbjct: 6   YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQ 64

Query: 65  VYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMG 124
            YDQ+G+ G+       GA GF     G G  T F     +  DIF +FFG     G  G
Sbjct: 65  AYDQFGKAGVNA-----GAGGF-----GQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGG 114

Query: 125 GSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAP-IERTLPCSLEDLYKGTTK- 182
           G R   SG  R   G D+  +              +   P +E  + C+     KG++  
Sbjct: 115 GRR---SGPQR---GSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPT 168

Query: 183 -----------------------------KMKISRDVIDASGRPNTTEEILTIEIK--PG 211
                                        K  +  +     G     E+  TI IK  PG
Sbjct: 169 TCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPG 228

Query: 212 WKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYT 270
            + G+++    +G    N  P  DL  +   K H LF+R GNDL++ +KISL +A+ G  
Sbjct: 229 VETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAE 288

Query: 271 VQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQ 330
           +++ T+DG+   + I           +KG GMP      K G+  +   I+ P K+T  Q
Sbjct: 289 IEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGK-GDQHVIVKIEIPKKITRRQ 347

Query: 331 K 331
           +
Sbjct: 348 R 348

Length = 372

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  138 bits (350), Expect = 6e-38
 Identities = 112/376 (29%), Positives = 165/376 (43%), Gaps = 71/376 (18%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L +++ A ++++KKA+RKLA+K+HPDKN  NK+ AE KFK+I+EAY VLSDPQK+
Sbjct: 5   DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKK 63

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNP-EDIFSEFFGFSSPFGD 122
           A YDQ+G     G             G G+GG   F F+      DIF  FFG     G 
Sbjct: 64  AQYDQFGTADFNG-----------AGGFGSGGFGGFDFSDMGGFGDIFDSFFG-----GG 107

Query: 123 MGGSRASASGFPRG--------------MFGDDIFASFNRGSAGEGSANALRKAAPIERT 168
            G S    +G  RG              +FG +   S  R    E       K     +T
Sbjct: 108 FGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKT 167

Query: 169 LP-CSLEDLYKGTTKKMKISRDVIDAS-----------GRPNTTEE-------------- 202
              C       G T ++++ R+    S           G     E+              
Sbjct: 168 CDKC-------GGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKN 220

Query: 203 -ILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKI 260
             + + +  G   G  I    +G   +N  P+ DL   I   PH  FKR G D+ + + I
Sbjct: 221 RKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHI 280

Query: 261 SLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN 319
           S  +A  G  +++ T+DG     VP  +     +   +KG+G+P     + RGN  +   
Sbjct: 281 SFAKAALGTEIKVPTVDGEVKYEVPAGTQPGTVFR--LKGKGVP-RVNSTGRGNQYVTVI 337

Query: 320 IKFPSKLTTEQKSGLK 335
           +  P KL ++QK  L 
Sbjct: 338 VDIPKKLNSKQKEALT 353

Length = 380

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  137 bits (347), Expect = 1e-37
 Identities = 80/197 (40%), Positives = 98/197 (49%), Gaps = 42/197 (21%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           M  DYYKIL VDRNA +ED+KKA+R+LA KWHPD +P NK +AE KFK+ISEAY+VLSDP
Sbjct: 1   MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDP 60

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKR  YDQ             G   F   G+         F+  N  DIF++ FG     
Sbjct: 61  QKRRQYDQ------------TGTVDFGAGGSNFNWDNFTHFSDIN--DIFNQIFG----- 101

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
                          G FG D F+ F    +             I   L  SLED Y GT
Sbjct: 102 ---------------GNFGSDFFSGFGNQQSTR------NIDLDIYTNLDISLEDAYYGT 140

Query: 181 TKKMKISRDVI--DASG 195
            K++K  R+ +  D SG
Sbjct: 141 EKRIKYRRNAMCPDCSG 157

Length = 365

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  138 bits (349), Expect = 1e-37
 Identities = 107/392 (27%), Positives = 149/392 (38%), Gaps = 86/392 (21%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           D+YK L V  +A  E++KKAYRKLA + HPD NP +   AE +FK +SEA+DVLSDP KR
Sbjct: 10  DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKR 68

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
             YD+       G        G  G G    G     FN        ++ F         
Sbjct: 69  KEYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFN-------LNDLFD-------- 113

Query: 124 GGSRASASGFPRGMFGDDIFAS-FNRGSAGEGSAN-------------ALRKAA-----P 164
              R    G        D+F   FNRG      +                 +AA     P
Sbjct: 114 AAGRGGGGGI------GDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMP 167

Query: 165 IERTLP-----CSLEDLYKGTTKKM--------KISRD------------------VID- 192
           +  T P     C       GT+ K+         ISR+                  +I+ 
Sbjct: 168 LRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIED 227

Query: 193 ------ASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHS 245
                  +G    T  I  + I PG + G +I    +G       PS DL   +  +P  
Sbjct: 228 PCEECKGTGVTTRTRTI-NVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDK 286

Query: 246 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEGMPI 304
           +F RDG+DL VT  +S  E   G T+ + TLDG   + VP  +         ++G G  +
Sbjct: 287 VFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVPAGTADGRILR--VRGRG--V 342

Query: 305 PKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKR 336
           PK     G+L +   +  P  L       L+ 
Sbjct: 343 PKRSGGAGDLLVTVKVAVPPNLDGAAAEALEA 374

Length = 392

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  136 bits (345), Expect = 3e-37
 Identities = 111/364 (30%), Positives = 160/364 (43%), Gaps = 51/364 (14%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL + ++A  ED+KKAYRKLAMK+HPDKN   + DAE KFK+ISEAY VLSD +KR
Sbjct: 6   DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKN--KEPDAEEKFKEISEAYAVLSDAEKR 63

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YD++G  G+  Q        F GA  G  G            DIF  FFG     G M
Sbjct: 64  AQYDRFGHAGIDNQYSAEDI--FRGADFGGFG------------DIFEMFFGGGGRRGRM 109

Query: 124 GGSRAS------ASGFPRGMFGDDIFASFNRGS----------------------AGEGS 155
           G  R S              FG        R                         G G 
Sbjct: 110 GPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQ 169

Query: 156 ANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKG 215
               R   P+ + +  +      G  + ++    V   +G+   T +I T+ +  G   G
Sbjct: 170 VTTTRS-TPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKI-TVNVPAGADSG 227

Query: 216 TKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLT 274
            ++    +G       PS DL  ++  K H  F+R G+D++    IS  +A  G  + + 
Sbjct: 228 LRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVP 287

Query: 275 TLDGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSG 333
           TL G+  + +P  +     +   +K +GMP       +G+  +K  +K P+KLT EQK  
Sbjct: 288 TLYGKVKMNIPPGTQTHSVFR--LKDKGMP-RLHGHGKGDQLVKVIVKTPTKLTQEQKEL 344

Query: 334 LKRL 337
           L+  
Sbjct: 345 LREF 348

Length = 377

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  136 bits (344), Expect = 5e-37
 Identities = 106/394 (26%), Positives = 170/394 (43%), Gaps = 112/394 (28%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L V ++A ++++KKAYRKL+ K+HPD N   ++ A+ KFK+ISEAY+VLSD QKR
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKR 62

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQ+G  G           GF G G G G               F   FGF       
Sbjct: 63  AQYDQFGHAGPNQ--------GFGGGGFGGGD--------------FGGGFGF------- 93

Query: 124 GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK 183
                           +DIF+SF  G       NA R+ A ++ T+  + E+   G  K+
Sbjct: 94  ----------------EDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKE 137

Query: 184 MKISRDV----IDASG-RPNTTEEI---------LTIEIKPGWKK-----------GTKI 218
           ++I ++        SG +P T++E          +++E    + +           GT  
Sbjct: 138 IEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQ 197

Query: 219 TFPEK-------GNELRNV-----IPS------------------------DLIFIIDEK 242
              EK       G   +       IP+                        DL  +   +
Sbjct: 198 EIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVR 257

Query: 243 PHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEG 301
           PH  F+RDG+D+     ++  +A  G  +++ TL G+  L +P  +     +   +KG+G
Sbjct: 258 PHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGTQFR--LKGKG 315

Query: 302 MPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLK 335
           +P  +    +G+  +   +  P+KLT  QK  L+
Sbjct: 316 VPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLR 348

Length = 376

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  133 bits (336), Expect = 5e-36
 Identities = 105/367 (28%), Positives = 161/367 (43%), Gaps = 61/367 (16%)

Query: 3   VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
           +DYY++L V R A  +++K AYRKLA+K+HPD+N   +K A  KF QI+EAY VLSD +K
Sbjct: 2   MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK--EKGAAEKFAQINEAYAVLSDAEK 59

Query: 63  RAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGD 122
           RA YD++G                PGAG   G P  F     +P DIF + FG  + FG 
Sbjct: 60  RAHYDRFGTA--------------PGAGMPGGDP--FGGMGFDPMDIFEQLFG-GAGFGG 102

Query: 123 MGGSRASASG----------FPRGMFGDDIFASFNR--------GSAGE----------- 153
             G R  A G            +   G+++    +R        GS  E           
Sbjct: 103 GRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPT 162

Query: 154 -GSANALRKAAP-----IERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIE 207
              A A+R  A      +E   PC      +G  + +     V    GR    E +  ++
Sbjct: 163 CRGAGAVRAQARTIFGVVETQQPCP---TCRGEGQIITDPCTVCRGRGRTLKAETV-KVK 218

Query: 208 IKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALT 267
           +  G  +G +I     GNE       DL   I+ +PH   +R+   L+   +I   +A  
Sbjct: 219 LPRGIDEGYRIRVAGMGNEGPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAAL 277

Query: 268 GYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLT 327
           G  + + TLDG    + +           ++G+GMP   + +  G+L +++ I  P +L+
Sbjct: 278 GGQITVPTLDGPQ-VIEVKPGTQHGDLHRLRGQGMP-RLQGAGTGDLIVEYEIAVPKQLS 335

Query: 328 TEQKSGL 334
            E +  L
Sbjct: 336 PEAREAL 342

Length = 371

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  132 bits (334), Expect = 1e-35
 Identities = 64/139 (46%), Positives = 82/139 (58%), Gaps = 23/139 (16%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL V R+A EE++KK+YRKLAMK+HPD+NP + K+AE  FK+ +EAY+VLSDP+KR
Sbjct: 5   DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKR 63

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
            +YDQYG EGL G        GF G        +SF        DIF +FFG    FG  
Sbjct: 64  GIYDQYGHEGLSGT-------GFSGFSGFDDIFSSF-------GDIFEDFFG----FGGG 105

Query: 124 GGSRASASGFPRGMFGDDI 142
              R+          G D+
Sbjct: 106 RRGRSRT----AVRAGADL 120

Length = 366

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  124 bits (313), Expect = 1e-32
 Identities = 61/140 (43%), Positives = 83/140 (59%), Gaps = 25/140 (17%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L V R+A E+++KKAYRKLA+++HPD+NP+N  +AE KFK+ +EAY+VL D +KR
Sbjct: 5   DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKR 63

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YD++G  G+ G     G  GF  A                 EDIFS    FS  FGD+
Sbjct: 64  ARYDRFGHAGVNGN---GGFGGFSSA-----------------EDIFSH---FSDIFGDL 100

Query: 124 -GGSRASASGFPRGMFGDDI 142
            G S   +   PR   G D+
Sbjct: 101 FGFSGGGSRRGPRPQAGSDL 120

Length = 373

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  114 bits (289), Expect = 2e-32
 Identities = 43/64 (67%), Positives = 56/64 (87%), Gaps = 1/64 (1%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V R+A +E++KKAYRKLA+K+HPDKNP +   AE KFK+I+EAY+VLSDP+KR
Sbjct: 1  DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPA-AEEKFKEINEAYEVLSDPEKR 59

Query: 64 AVYD 67
          A+YD
Sbjct: 60 AIYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  122 bits (306), Expect = 9e-32
 Identities = 105/365 (28%), Positives = 163/365 (44%), Gaps = 55/365 (15%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L VDRNA  +++KKAYRKLA K+HPD N     DAE KFK++ EAYD LSDPQK+
Sbjct: 5   DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKK 62

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQ+G              GF G GAG  G  S         DIF  FFG      + 
Sbjct: 63  AHYDQFGHTDPN--------QGFGGGGAGDFGGFS---------DIFDMFFGGGGGRRNP 105

Query: 124 GGSRASAS-------GFPRGMFGDDIFASFNR--------GS--------------AGEG 154
              R  A         F   +FG +      R        GS               G G
Sbjct: 106 NAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSG 165

Query: 155 SANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKK 214
             N + +  P  R +   +    +GT K +K         G+    ++I  +++  G   
Sbjct: 166 QLN-VEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKI-NVKVPAGIDH 223

Query: 215 GTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQL 273
           G ++    +G    N  P  DL  + + KPH  F+RDG+D+     ++  +   G  +++
Sbjct: 224 GQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEV 283

Query: 274 TTLDGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKS 332
            TL+G+  L +P  +    ++   ++G+G+P       +G+  ++  +  P  LT ++K 
Sbjct: 284 PTLNGKVKLKIPAGTQTGTSFR--LRGKGVP-NVHGRGQGDQHVQVRVVTPKNLTEKEKE 340

Query: 333 GLKRL 337
            ++  
Sbjct: 341 LMREF 345

Length = 371

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  122 bits (307), Expect = 1e-31
 Identities = 106/386 (27%), Positives = 161/386 (41%), Gaps = 80/386 (20%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYYK+L V ++A E ++KKAYRKLA ++HPD N  + K AE +FK+ISEAYDVLSD +KR
Sbjct: 10  DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKR 68

Query: 64  AVYDQ----YGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSP 119
             YD+    +G  G +           PG G G GG   F F+         + FG  + 
Sbjct: 69  KEYDEARSLFGNGGFR-----------PGPGGGGGG--GFNFD-------LGDLFGGGAQ 108

Query: 120 FGDMGGSRASASGFPRGMFG---------------DDIFASFNRGSAGEGSANALRKAAP 164
            G   G          G+F                 ++  SF    A +G+   LR  + 
Sbjct: 109 GGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFT--EAIDGATVPLRLTSQ 166

Query: 165 IERTLPCSLEDLYKGTTKKM--------KISR-------------------------DVI 191
                 CS      GTT ++        ++SR                          V 
Sbjct: 167 AP-CPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVC 225

Query: 192 DASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRD 250
             SGR   +   + + I  G   G +I    KG       P+ DL  ++   PH +F R 
Sbjct: 226 KGSGRA-KSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRS 284

Query: 251 GNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSK 310
           G++L VT  ++  EA  G  V++ TL G  +TV +           ++G+G    ++   
Sbjct: 285 GDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKG--AVRKDGT 342

Query: 311 RGNLRIKFNIKFPSKLTTEQKSGLKR 336
           RG+L +   +  P  L+ + +  L+ 
Sbjct: 343 RGDLLVTVEVAVPKDLSGKAREALEA 368

Length = 389

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  122 bits (307), Expect = 1e-31
 Identities = 72/184 (39%), Positives = 96/184 (52%), Gaps = 29/184 (15%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY IL V + A  E++KKAYRKLA+K+HPDKNP +  +AE +FK++SEAY+VLSD QKR
Sbjct: 2   DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKR 60

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
             YD+YG++G     P  GA GF GAG G            N ED    F G     G+ 
Sbjct: 61  ESYDRYGKDG-----PFAGAGGFGGAGMG------------NMEDALRTFMGAFG--GEF 101

Query: 124 GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK 183
           GG          G F + +F          G     R+ A  +  +  S E+  KG  K+
Sbjct: 102 GGG---------GSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKE 152

Query: 184 MKIS 187
           + +S
Sbjct: 153 LLVS 156

Length = 391

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  121 bits (305), Expect = 2e-31
 Identities = 66/145 (45%), Positives = 84/145 (57%), Gaps = 29/145 (20%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKD--AEAKFKQISEAYDVLS 58
           M  DYY+IL V R+A +++LK+AYR+LA K+HPD N    K+  AE +FK+I+ AY+VLS
Sbjct: 1   MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVN----KEPGAEDRFKEINRAYEVLS 56

Query: 59  DPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSS 118
           DP+ RA YDQ+GE G+       GA+GFP  G   GG   F        DIF  FF   S
Sbjct: 57  DPETRARYDQFGEAGVS------GAAGFPDMG-DMGG---F-------ADIFETFF---S 96

Query: 119 PFGDMGGSRASASGFPRG-MFGDDI 142
            FG  GG         RG   GDD+
Sbjct: 97  GFGGAGGQGGRRR--RRGPQRGDDL 119

Length = 374

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  119 bits (301), Expect = 5e-31
 Identities = 65/180 (36%), Positives = 88/180 (48%), Gaps = 42/180 (23%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL V RNA +E++K+AY++L  +WHPD++P N+K+AE KFK+I EAY+VLSDPQKR
Sbjct: 5   DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A+YD++G  G             P     +GG           EDIF +F          
Sbjct: 65  AMYDRFGYVG----------EQPPYQETESGGGFF--------EDIFKDFENI------- 99

Query: 124 GGSRASASGFPRGMFGDDIFASF--NRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTT 181
                         F  DIF  F   R +  E    A R+   I   +  +L DL  G  
Sbjct: 100 --------------FNRDIFDIFFGERRTQEEQREYA-RRGEDIRYEIEVTLSDLINGAE 144

Length = 369

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  118 bits (298), Expect = 2e-30
 Identities = 70/203 (34%), Positives = 98/203 (48%), Gaps = 45/203 (22%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L V + A  +++KKAYRK A+++HPDKNP + K+AE KFK+ +EAYDVLSDP KR
Sbjct: 6   DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKR 64

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSE----FFGFSSP 119
           + YDQ+G  G+ G     G  GF G G                EDIFS     F G    
Sbjct: 65  SRYDQFGHAGVGGA---AGGGGFSGEGMSM-------------EDIFSMFGDIFGGHGGG 108

Query: 120 FGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKG 179
           FG  GG            FG            G GS   + + + +   +  +L+++  G
Sbjct: 109 FGGFGG------------FG------------GGGSQQRVFRGSDLRVKVKLNLKEISTG 144

Query: 180 TTKKMKISRDVIDASGRPNTTEE 202
             KK K+ + V  +       E 
Sbjct: 145 VEKKFKVKKYVPCSHCHGTGAEG 167

Length = 386

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  115 bits (290), Expect = 2e-29
 Identities = 98/371 (26%), Positives = 161/371 (43%), Gaps = 54/371 (14%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY++L V + A E+++++AYRKLA ++HPD   N   DA  K  +I+EA DVL D  KR
Sbjct: 5   DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDL--NKSPDAHDKMVEINEAADVLLDKDKR 62

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNP-----EDIFSEFFGFSS 118
             YDQ+G           G+SGF    +  G       N  +       +IFS+FFG S+
Sbjct: 63  KQYDQFGHAAFD------GSSGF---SSNFGDFEDLFSNMGSSGFSSFTNIFSDFFG-SN 112

Query: 119 PFGDMGGSRASASG------FPRGMFG------------------------DDIFASFNR 148
                  ++  +        F   +FG                         DI    N 
Sbjct: 113 KSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNC 172

Query: 149 GSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEI 208
              GE            +++  C   ++  G  K +K         G+    ++I  + I
Sbjct: 173 HGTGEVLVQKNMGFFQFQQSAKC---NVCNGAGKIIKNKCKNCKGKGKYLERKKI-EVNI 228

Query: 209 KPGWKKGTKITFPEKGN-ELRNVIPSDLIFIIDEKPHSLFKR-DGNDLVVTQKISLVEAL 266
             G +   +I   +KG+  L N +  DLI  I  K   +F+  + ND+++T  IS ++A+
Sbjct: 229 PKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAI 288

Query: 267 TGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKL 326
            G  + + TLDG  +   +   I+     +I  +G+       KRG+L IK NI  P  L
Sbjct: 289 LGNEIIIKTLDG-DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNL 347

Query: 327 TTEQKSGLKRL 337
           + ++K  ++++
Sbjct: 348 SKKEKELIEQI 358

Length = 372

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score =  106 bits (267), Expect = 3e-29
 Identities = 39/60 (65%), Positives = 53/60 (88%)

Query: 3  VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
           DYY+IL V R+A  +++KKAYRKLA+K+HPDKNP +K++AE KFK+I+EAY+VLSDP+K
Sbjct: 1  TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  114 bits (287), Expect = 5e-29
 Identities = 106/364 (29%), Positives = 158/364 (43%), Gaps = 49/364 (13%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           M + YY+IL+V++++ +E +KK+YRKLA+K+HPD+N  + K+AE KFK I+EAY VLSD 
Sbjct: 1   MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDE 59

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           +KRA+YD+YG++GL              AGA     + F       ED+ S FF  +  F
Sbjct: 60  KKRALYDRYGKKGLN------------QAGASQSDFSDFF------EDLGS-FFEDAFGF 100

Query: 121 GDMGGSRASAS-----------GFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTL 169
           G  G  R  +S            F   +FG          S  E       K   +E   
Sbjct: 101 GARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCK 160

Query: 170 PCSLEDLY----------------KGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWK 213
            C+ +                   +G  K +K               EEI  I I  G  
Sbjct: 161 QCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAI-IPEGID 219

Query: 214 KGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQL 273
              ++    KGNE       DL      K    FKR+G DL +   +       G+T+++
Sbjct: 220 DQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKV 279

Query: 274 TTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSG 333
            +L G  L + I            + EG+  P E S RG+L ++  + +P  L  EQ+  
Sbjct: 280 PSLKGDELELKIPRNARDRQTFAFRNEGVKHP-ESSYRGSLIVELQVIYPKSLNKEQQEL 338

Query: 334 LKRL 337
           L++L
Sbjct: 339 LEKL 342

Length = 369

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score =  110 bits (276), Expect = 1e-28
 Identities = 65/253 (25%), Positives = 97/253 (38%), Gaps = 32/253 (12%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL V  NA  E++KKAYRKLA+K+HPD+NP + K AE KFK+I+EAY++LSDP++R
Sbjct: 7   DYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERR 66

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YD+ G +        PG S    A     G             ++ E+ G  +     
Sbjct: 67  AEYDKIGADN-----YFPGKSYRESAAFPIEGSLQL-------TGLYEEWRGKRNKTERK 114

Query: 124 -GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTK 182
              +   + G         +FA            +   +   +   L  + E+   G  K
Sbjct: 115 ASLADLLSRGLSGLAAALSLFADE------AALRSGSLRRRDLAANLADNFEEALAGVKK 168

Query: 183 KMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEK 242
            +         S       E   + +K   K                            K
Sbjct: 169 AVARLLGKALKSTIKAGALEGKALRLKGLLKSARGALG-------------KARLKELSK 215

Query: 243 PHSLFKRDGNDLV 255
            H  F  +G+D  
Sbjct: 216 RHPPFALEGDDKY 228

Length = 237

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  111 bits (278), Expect = 3e-28
 Identities = 84/287 (29%), Positives = 118/287 (41%), Gaps = 49/287 (17%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY I+ V      + +K AYR+LA K+HPD +     DAEA+FK+++EA++VLSD Q+R
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRR 62

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQ     L      P  +     G G        FN  + +DIFS  F         
Sbjct: 63  AEYDQ-----LWQHRNDPQFNRQFQHGDGQ------SFNAEDFDDIFSSIF--------- 102

Query: 124 GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK 183
            G  A  S       G D                       IE  +   LE+      + 
Sbjct: 103 -GQHARQSRQRPAARGHD-----------------------IEIEVAVFLEETLTEHKRT 138

Query: 184 MKISRDVIDASGRPNT-TEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDE 241
           +  +  V +A G       + L ++I  G   G +I    +G    N  P+ DL  +I  
Sbjct: 139 ISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHI 198

Query: 242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT-LTVPINS 287
            PH LF   G DL +   ++  EA  G  V + TL     LT+P  S
Sbjct: 199 APHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGS 245

Length = 306

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  111 bits (281), Expect = 4e-28
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 202 EILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKI 260
           + +++ I  G   G +I    +G    N  P+ DL   +  KPH +F+RDG+DL     I
Sbjct: 213 KSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPI 272

Query: 261 SLVEALTGYTVQLTTLDGR-TLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN 319
           S  EA  G  +++ TLDGR  L +P  +         ++G+GMP  +    RG+L ++  
Sbjct: 273 SFTEAALGGEIEVPTLDGRVKLKIPAGTQTGEV--FRLRGKGMPKLR-SGGRGDLYVRVK 329

Query: 320 IKFPSKLTTEQKSGLKRLIP 339
           ++ P  L+ EQK  L+    
Sbjct: 330 VETPKNLSDEQKELLEEFAK 349

Length = 371

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  108 bits (272), Expect = 7e-27
 Identities = 55/136 (40%), Positives = 69/136 (50%), Gaps = 29/136 (21%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           M  DYY +L V RNA + ++K+AYRKLA + HPD NP+ +  A+ KFK+IS AY+VLSDP
Sbjct: 1   MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEE--AQEKFKEISVAYEVLSDP 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           +KR + D      L G        G  G G G GG            D+F  FFG     
Sbjct: 59  EKRRIVD------LGGDPLESAGGGGGGFGGGFGGLG----------DVFEAFFGGG--- 99

Query: 121 GDMGGSRASASGFPRG 136
                SR      PRG
Sbjct: 100 ---AASRG-----PRG 107

Length = 378

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  108 bits (270), Expect = 1e-26
 Identities = 106/376 (28%), Positives = 161/376 (42%), Gaps = 66/376 (17%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           M  DYY+IL V + A + DLKKAY KLA ++HPD    + KDAE KFK+I+ AYDVL D 
Sbjct: 1   MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDE 58

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
           QKRA YD++G +  + Q           +  G G    F  +     DIF +FF   S F
Sbjct: 59  QKRAAYDRFGHDAFQNQQ----------SRGGGGNHGGFHPDI---NDIFGDFF---SDF 102

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
             MGGSR S     + + G D+   +N     E + + + K       + C   D   G+
Sbjct: 103 --MGGSRRSRPTSSK-VRGSDL--KYNLTINLEEAFHGIEKNISFSSEVKC---DTCHGS 154

Query: 181 TKKMKISRDVIDASGRPNTT---EEILTIE------------IKPGWKK----------- 214
             +   +    DA      T   +   TIE            IK   KK           
Sbjct: 155 GSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQR 214

Query: 215 ------------GTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKIS 261
                       GT+I    +G   +R     DL   I  KPH ++K DG +L     IS
Sbjct: 215 NLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPIS 274

Query: 262 LVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 321
            V A  G  +++  ++G  + + I +      +  ++ +GM   +  + RG++    +++
Sbjct: 275 FVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMRS-TIRGDMLTHIHVE 333

Query: 322 FPSKLTTEQKSGLKRL 337
            P  L+  Q+  L+  
Sbjct: 334 VPKNLSKRQRELLEEF 349

Length = 372

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 97.6 bits (244), Expect = 1e-25
 Identities = 39/80 (48%), Positives = 52/80 (65%)

Query: 253 DLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRG 312
           DL VT  ISL EAL G TV++ TLDGR + + I +   P  +  IKG+GMPI K  + RG
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 313 NLRIKFNIKFPSKLTTEQKS 332
           +L +  N+K P KL++EQK 
Sbjct: 61  DLIVTLNVKIPKKLSSEQKE 80

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 95.7 bits (239), Expect = 4e-25
 Identities = 36/56 (64%), Positives = 48/56 (85%), Gaps = 1/56 (1%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSD 59
          DYY IL V  +A +E++KKAYRKLA+K+HPDKNP++  +AE KFK+I+EAY+VLSD
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  101 bits (252), Expect = 3e-24
 Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 43/191 (22%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
           M  DYY+IL + + A ++++KKAYRK+A+K+HPDKN  N K+AE+ FK+ +EAY+VL D 
Sbjct: 1   MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDD 59

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
            KRA YD++G    +      G  GF G   G                    F GFS  F
Sbjct: 60  NKRAQYDRFGHTAFE------GGGGFEGFSGG--------------------FSGFSDIF 93

Query: 121 GDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
            D G                DIF SF  G+ G+       K   +   +  SLED Y G 
Sbjct: 94  EDFG----------------DIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGY 137

Query: 181 TKKMKISRDVI 191
              + I+R+++
Sbjct: 138 KNNINITRNML 148

Length = 365

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 94.1 bits (233), Expect = 4e-21
 Identities = 39/74 (52%), Positives = 58/74 (78%), Gaps = 2/74 (2%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY++L +DR+A E+++KKA+RKLA K+HPD+  N   DA + F +I+EA DVLS+P+KR
Sbjct: 3  DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDR--NKAPDAASIFAEINEANDVLSNPKKR 60

Query: 64 AVYDQYGEEGLKGQ 77
          A YD+YG +G+  +
Sbjct: 61 ANYDKYGHDGVDRE 74

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 90.3 bits (225), Expect = 2e-20
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 6/146 (4%)

Query: 194 SGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGN 252
            GR     + +T++I  G   G ++    KGN   N  P+ DL  +I  KPH +F+RDGN
Sbjct: 209 KGR-VKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGN 267

Query: 253 DLVVTQKISLVEALTGYTVQLTTLDGR-TLTVPINSVISPTYEEVIKGEGMPIPKEPSKR 311
           DL +   IS  +A+ G  +++ TLDG   L +P            +KG+G+P  +    R
Sbjct: 268 DLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAG--TQSGTVFRLKGKGVPRLRGN-GR 324

Query: 312 GNLRIKFNIKFPSKLTTEQKSGLKRL 337
           G+L +   ++ P  L+ EQK  L+ L
Sbjct: 325 GDLLVTVKVETPKNLSKEQKELLEEL 350

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 80.2 bits (198), Expect = 7e-17
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 205 TIEIKPGWKKGTKITFPEKGNELRNVIP-SDLIFIIDEKPHSLFKRDGNDLVVTQKISLV 263
           T++I  G + GT +     GN      P  DL  I+  +P   FKR G+DL+    I  +
Sbjct: 228 TVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYL 287

Query: 264 EALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP 323
           +A+ G TV++   +G T  + I     P     +KG+G+P      +RG+L +  +++ P
Sbjct: 288 QAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP-NMRYGRRGDLIVNVHVEIP 346

Query: 324 SKLTTEQKSGLKRL 337
            +L+ E++  LK L
Sbjct: 347 KRLSREERKLLKEL 360

Length = 369

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 5/151 (3%)

Query: 189 DVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLF 247
           D     G    T++ L I I  G   GT++    +G+  LR   P DL   +  K    F
Sbjct: 204 DACGGQGVKQVTKK-LKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEF 262

Query: 248 KRDGNDLVVTQKISLVEALTGYTVQLTTLDGRT-LTVPINSVISPTYEEVIKGEGMPIPK 306
           +RDG +++   KIS ++A+ G T+++ T+DG   LT+P  +   P     ++ +G+P   
Sbjct: 263 RRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGT--QPNTVLTLENKGVPRLG 320

Query: 307 EPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
            P  RG+  I   +K P++++ E++  L++L
Sbjct: 321 NPVARGDHLITVKVKIPTRISDEERELLEKL 351

Length = 374

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 3/138 (2%)

Query: 201 EEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQK 259
           EE++T++I  G  +G +++   KGN      +  DL+ +I+E+PH    RD NDL+    
Sbjct: 226 EEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLL 285

Query: 260 ISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN 319
           +S+  A  G  V++ T+DG+   V I +   P     ++ +G+P        G+L +  +
Sbjct: 286 LSVPTAALGGAVEVPTIDGKA-KVKIEAGTQPGKVLRLRNKGLP-SVNGYGTGDLLVNVS 343

Query: 320 IKFPSKLTTEQKSGLKRL 337
           +  P  L+ E+K  L+++
Sbjct: 344 VYIPETLSKEEKQTLEKM 361

Length = 386

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 195 GRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-----DLIFIIDEKPHSLFKR 249
           GR     EI T++I  G   G +I    +G     V P      DL   + E+PH +F R
Sbjct: 206 GRVRARREI-TVKIPAGVGDGMRIRLAAQGE----VGPGGGPAGDLYVEVHEQPHDVFVR 260

Query: 250 DGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPS 309
           DG+DL  T  + +V+A  G TV +  +      + I     P     ++G GMP  +   
Sbjct: 261 DGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-G 319

Query: 310 KRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
            RG+L     +  P++L  E    L+ L
Sbjct: 320 GRGDLHAHVEVVVPTRLDHEDIELLREL 347

Length = 378

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 4/73 (5%)

Query: 2   GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN----NKKDAEAKFKQISEAYDVL 57
           G D Y+IL +D++  E D+KK YR L+MK+HPDK P      + + E K+K I++AY +L
Sbjct: 97  GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLL 156

Query: 58  SDPQKRAVYDQYG 70
           +D ++R  Y  YG
Sbjct: 157 TDKKRRENYLNYG 169

Length = 610

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 4/105 (3%)

Query: 232 PSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGR-TLTVPINSVIS 290
           P DL  +I  +   +F+R G DLVVTQ+IS V+A  G  +++ TLD   TL +P  +   
Sbjct: 244 PGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSG 303

Query: 291 PTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLK 335
             +   ++G+G+P     S++G+L ++ ++  P+KLT  Q+  L+
Sbjct: 304 EVFR--LRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLR 345

Length = 373

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 5/139 (3%)

Query: 199 TTEEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVT 257
              + + ++I  G   G+++    +G   +R   P DL   +  +PH  F+RDGND+   
Sbjct: 210 RVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCK 269

Query: 258 QKISLVEALTGYTVQLTTLDG-RTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRI 316
             IS V+A  G  +++ TL+G R L +P  +     +    KG+G+P  +    RG+  I
Sbjct: 270 VPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFR--FKGKGIPSLRG-GGRGDQII 326

Query: 317 KFNIKFPSKLTTEQKSGLK 335
           +  +K P++LT +Q+  L 
Sbjct: 327 EVEVKVPTRLTKKQEELLT 345

Length = 366

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 2/131 (1%)

Query: 199 TTEEILTIEIKPGWKKGTKITFPEKGN-ELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVT 257
             +E + ++I  G     +I    KG+    N    DL   I  KPH +FKR+G DL  T
Sbjct: 212 KKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYAT 271

Query: 258 QKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIK 317
             IS  +A  G  +++ T+  + + + I        + +IK EGMPI     K GNL + 
Sbjct: 272 LPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPI-LHTEKFGNLILI 330

Query: 318 FNIKFPSKLTT 328
             IK P  L +
Sbjct: 331 IKIKTPKNLNS 341

Length = 365

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 57.5 bits (138), Expect = 4e-09
 Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)

Query: 5   YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
           +Y IL V  NA  +++ + Y KLA  ++P K   N  +   KFK+I+EAY +L D  K+ 
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKK 632

Query: 65  VYDQYGEEGLKG 76
           +Y+++G +G+KG
Sbjct: 633 MYNKFGYDGIKG 644

Length = 1136

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 51.4 bits (123), Expect = 3e-07
 Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 7/135 (5%)

Query: 206 IEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDEKPHSLFKRDGNDLVVTQKISLVE 264
           + I  G   G ++     G+  +N  P+ DL   ID +PH +F+R G+DL++   I  V+
Sbjct: 231 VHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVD 290

Query: 265 ALTGYTVQLTTL--DGRT-LTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 321
           A  G   ++ TL  +G   LT+P   + S T  +V +G+G P       RG+L ++ +++
Sbjct: 291 AALGMKKEIPTLLKEGTCRLTIP-EGIQSGTILKV-RGQGFP-NVHGKGRGDLLVRISVE 347

Query: 322 FPSKLTTEQKSGLKR 336
            P  L+ EQK  L++
Sbjct: 348 TPQNLSEEQKELLRQ 362

Length = 391

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 50.0 bits (119), Expect = 8e-07
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 3   VDYYKILQVDR---NAKEEDLKKAYRKLAMKWHPDKNP-NNKKDAEAKFKQISEAYDVLS 58
           VD Y +L + +    A    + KA++K   K+HPDK      K  +  FK I +A +VL 
Sbjct: 43  VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLG 102

Query: 59  DPQKRAVYDQYGEEGLKGQMPPP 81
           D + R  YD    +     +PPP
Sbjct: 103 DRKLRLQYDSNDFD---ADVPPP 122

Length = 379

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 43.6 bits (104), Expect = 6e-05
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 6/60 (10%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDK------NPNNKKDAEAKFKQISEAYDVL 57
           D YK+L V  +  ++++K+AYRKL  + HPDK       P   + A+ K ++I  AY+++
Sbjct: 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI 260

Length = 267

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 201 EEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI 260
            E ++++I  G     ++    KG         DL  ++        +R  +DL V QKI
Sbjct: 220 NEDISVKIPKGATDNLRLRVKGKGQSY-GGRTGDLYVVLRVNNDPNIQRINDDLYVDQKI 278

Query: 261 SLVEALTGYTVQLTTLDGR-TLTVPINSVISPTYEEVIKGEGMP-IPKEPSKRGNLRIKF 318
           +  +A  G  +++     +  L +P  +   P     IKG GMP +    S  G+L ++ 
Sbjct: 279 NFPQAALGGEIEIKLFREKYNLKIPEGT--QPGEVLKIKGAGMPHLNGHGS--GDLLVRI 334

Query: 319 NIKFPSKLTTEQKSGLKRL 337
           N++ P +LT++QK  ++  
Sbjct: 335 NVEVPKRLTSKQKELIREF 353

Length = 365

>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 12/58 (20%)

Query: 17 EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQIS--------EAYDVLSDPQKRAVY 66
          E  L  AYR +  + HPD+      DAE   K+++        EAY  L DP KRA Y
Sbjct: 22 EAALDAAYRTVQAQVHPDRFAA-AGDAE---KRVAMQWATRANEAYQTLRDPLKRARY 75

Length = 176

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 17 EEDLKKAYRKLAMKWHPD--KNPNNKKDAEAKFKQISEAYDVLSDPQKRAVY 66
          +  L+K YR+L  ++HPD       +  A  +   +++AY  L DP +RA Y
Sbjct: 5  QSRLRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDK--NPNNK----KDAEAKFKQISEAYD 55
           D  K+L V+  A ++ +KKAYRKL  + HPDK      K    +  + K ++I EAY+
Sbjct: 114 DALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYE 171

Length = 174

>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 7  KILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
           +L + R+A      ++KAY +  +++HPDK  +     E K K+++  Y    +  K  
Sbjct: 9  DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSL 63

Query: 65 VYDQYGE 71
                E
Sbjct: 64 RDLDGEE 70

Length = 153

>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 4  DYYKILQV--DRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQIS----EAYDVL 57
          +Y+++L +  + N   + L+K Y  + +K+HPDK    ++  + +   I+     AY  L
Sbjct: 3  NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQE--KEQNLIIASELNNAYSTL 60

Query: 58 SDPQKRAVY 66
           D  KRA Y
Sbjct: 61 KDALKRAEY 69

Length = 166

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	339
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.95
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.95
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.87
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.81
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.8
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.79
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.78
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.77
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.75
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.75
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.72
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.71
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.68
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.68
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.64
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.63
PHA03102	153	Small T antigen; Reviewed	99.63
PRK01356	166	hscB co-chaperone HscB; Provisional	99.53
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.53
PRK05014	171	hscB co-chaperone HscB; Provisional	99.51
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.48
PRK03578	176	hscB co-chaperone HscB; Provisional	99.45
PRK00294	173	hscB co-chaperone HscB; Provisional	99.43
PTZ00100	116	DnaJ chaperone protein; Provisional	99.35
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.33
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.28
PHA02624	647	large T antigen; Provisional	99.23
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.21
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.16
PRK01773	173	hscB co-chaperone HscB; Provisional	99.16
PRK14282	369	chaperone protein DnaJ; Provisional	99.13
PRK14299	291	chaperone protein DnaJ; Provisional	99.04
PRK14290	365	chaperone protein DnaJ; Provisional	99.04
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.04
PRK14285	365	chaperone protein DnaJ; Provisional	99.03
PRK14294	366	chaperone protein DnaJ; Provisional	99.03
PRK14298	377	chaperone protein DnaJ; Provisional	98.98
PRK10767	371	chaperone protein DnaJ; Provisional	98.97
PRK14284	391	chaperone protein DnaJ; Provisional	98.97
PRK14287	371	chaperone protein DnaJ; Provisional	98.96
PRK14300	372	chaperone protein DnaJ; Provisional	98.96
PRK14279	392	chaperone protein DnaJ; Provisional	98.95
PRK14288	369	chaperone protein DnaJ; Provisional	98.95
PRK14301	373	chaperone protein DnaJ; Provisional	98.94
PRK14295	389	chaperone protein DnaJ; Provisional	98.93
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	98.93
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.91
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.89
PRK14286	372	chaperone protein DnaJ; Provisional	98.89
PRK14289	386	chaperone protein DnaJ; Provisional	98.89
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.89
PRK14293	374	chaperone protein DnaJ; Provisional	98.86
PRK14276	380	chaperone protein DnaJ; Provisional	98.86
PRK14280	376	chaperone protein DnaJ; Provisional	98.85
PRK14291	382	chaperone protein DnaJ; Provisional	98.84
PRK14281	397	chaperone protein DnaJ; Provisional	98.84
PRK14297	380	chaperone protein DnaJ; Provisional	98.81
PRK14278	378	chaperone protein DnaJ; Provisional	98.81
PRK14292	371	chaperone protein DnaJ; Provisional	98.79
PRK14277	386	chaperone protein DnaJ; Provisional	98.77
PRK14296	372	chaperone protein DnaJ; Provisional	98.76
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.76
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.75
PRK14283	378	chaperone protein DnaJ; Provisional	98.75
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.37
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.31
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.13
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	97.64
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.29
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.45
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.94
KOG0431	453	consensus Auxilin-like protein and related protein	95.1
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	93.32
PF13446	62	RPT: A repeated domain in UCH-protein	88.87
KOG0724	335	consensus Zuotin and related molecular chaperones	82.12

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.1e-75  Score=545.76  Aligned_cols=287  Identities=38%  Similarity=0.651  Sum_probs=247.5

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++||.+|||+||||||++||||+|+.+ ++|+++|++|++||||||||+||++||+||+++++++   
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~-~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~g---   77 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD-KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAG---   77 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccC---
Confidence            578999999999999999999999999999999999964 6899999999999999999999999999999887622   


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                       +++++ ++++|       +  . ++.|||++|||+++.     +     ..                      +.+.++
T Consensus        78 -g~gg~-g~~~f-------g--g-~~~DIF~~~FgGg~~-----~-----~~----------------------~~~~~~  113 (371)
T COG0484          78 -GFGGF-GFGGF-------G--G-DFGDIFEDFFGGGGG-----G-----RR----------------------RPNRPR  113 (371)
T ss_pred             -CcCCC-CcCCC-------C--C-CHHHHHHHhhcCCCc-----c-----cC----------------------CCCCcc
Confidence             11111 11111       1  1 578999999973200     0     00                      112367


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----C-------------------------------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----A-------------------------------------------  193 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g-------------------------------------------  193 (339)
                      ++.|+.+.|+|||+||+.|++++|.+.+...|    |                                           
T Consensus       114 rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G  193 (371)
T COG0484         114 RGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTG  193 (371)
T ss_pred             cCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccce
Confidence            89999999999999999999999999876432    1                                           


Q ss_pred             ------------CCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEee
Q 019573          194 ------------SGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI  260 (339)
Q Consensus       194 ------------~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I  260 (339)
                                  .| .+.+.++++|+||+|+.+|++|+++|+|++.. ++++|||||+|.|++|+.|.|+++||+++++|
T Consensus       194 ~~i~~pC~~C~G~G-~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~I  272 (371)
T COG0484         194 KIIKDPCGKCKGKG-RVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPI  272 (371)
T ss_pred             eECCCCCCCCCCCC-eEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEecccc
Confidence                        12 36678999999999999999999999999996 66789999999999999999999999999999


Q ss_pred             cHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          261 SLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       261 ~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ++.+|++|+++.|+|++|+ ++|+||+++++|+++||+|+|||... +..+|||||+|+|++|++|+.+|+++|+++.
T Consensus       273 s~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~-~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~  348 (371)
T COG0484         273 SFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLR-SGGRGDLYVRVKVETPKNLSDEQKELLEEFA  348 (371)
T ss_pred             CHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccC-CCCcCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            9999999999999999998 99999999999999999999999755 5667999999999999999999999999875

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.5e-68  Score=507.96  Aligned_cols=289  Identities=31%  Similarity=0.526  Sum_probs=239.7

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|+.||+||++++....  
T Consensus         1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~--   77 (369)
T PRK14288          1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG--   77 (369)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC--
Confidence            789999999999999999999999999999999999864 46899999999999999999999999999987664210  


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                       +.     ...|.+    + |  .++.++|+.|||++    +   .    .+                      ....++
T Consensus        78 -~~-----~~~~~~----~-f--~~~~~~F~~~fg~g----~---~----~~----------------------~~~~~~  111 (369)
T PRK14288         78 -AS-----QSDFSD----F-F--EDLGSFFEDAFGFG----A---R----GS----------------------KRQKSS  111 (369)
T ss_pred             -CC-----cccccc----c-h--hhHHHHHHhhcCCC----C---c----cc----------------------CcCCCC
Confidence             00     000100    0 1  02334555555420    0   0    00                      001234


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CC--------------------------------------C---
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----AS--------------------------------------G---  195 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~--------------------------------------G---  195 (339)
                      ++.|+.+.|.|||+|+|+|++++|.+.+.+.|    |+                                      |   
T Consensus       112 ~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~  191 (369)
T PRK14288        112 IAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKII  191 (369)
T ss_pred             CCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEc
Confidence            68899999999999999999999999765321    11                                      1   


Q ss_pred             ----------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEeecHHHH
Q 019573          196 ----------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA  265 (339)
Q Consensus       196 ----------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~a  265 (339)
                                .++.+.++++|.||+|+++|++|+|+|+|++.+++.+|||+|+|++++|+.|+|+|+||+++++|||+||
T Consensus       192 ~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eA  271 (369)
T PRK14288        192 KTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTI  271 (369)
T ss_pred             cccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHH
Confidence                      1355678999999999999999999999999888889999999999999999999999999999999999


Q ss_pred             hcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhCC
Q 019573          266 LTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       266 l~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~lp  339 (339)
                      |+|+++.|+||||+.++|+||+++++|++++|+|+|||... +..+|||||+|+|.+|+.|+++|+++|+++++
T Consensus       272 llG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~  344 (369)
T PRK14288        272 ALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE-SSYRGSLIVELQVIYPKSLNKEQQELLEKLHA  344 (369)
T ss_pred             hcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999998899999999999999999999999654 44689999999999999999999999999873

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.3e-67  Score=504.29  Aligned_cols=295  Identities=29%  Similarity=0.454  Sum_probs=237.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      -.+|||+||||+++|+.+|||+|||+||++||||+|++  ..|+++|++|++||+|||||.||+.||+||++++.++.+ 
T Consensus         2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~-   78 (372)
T PRK14296          2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSG-   78 (372)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCC-
Confidence            03799999999999999999999999999999999985  478899999999999999999999999999877653100 


Q ss_pred             CCCCCCCCCCC-CCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccc
Q 019573           81 PGASGFPGAGA-GAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANAL  159 (339)
Q Consensus        81 ~~~~~~~~~~~-f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  159 (339)
                      . .++|+++.. |.... ...|  .++.|+|++|||++    +        +.                       ...+
T Consensus        79 ~-~~~~~~~~~~~~~~~-~~g~--~~f~d~f~~~fggg----~--------~~-----------------------~~~~  119 (372)
T PRK14296         79 F-SSNFGDFEDLFSNMG-SSGF--SSFTNIFSDFFGSN----K--------SD-----------------------YQRS  119 (372)
T ss_pred             c-CcCCCcccccccccc-cccc--ccchhhhhhhcCCC----c--------cC-----------------------CCCc
Confidence            0 011111100 00000 0001  13456677766521    0        00                       0123


Q ss_pred             cCCCCeEEEEeeChhhheeCceEEEEEEEEEEc---------------------CCCc----------------------
Q 019573          160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVID---------------------ASGR----------------------  196 (339)
Q Consensus       160 ~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~---------------------g~G~----------------------  196 (339)
                      +++.|+.+.|.|||+|+|+|++++|.+.+.+.|                     |+|.                      
T Consensus       120 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~  199 (372)
T PRK14296        120 TKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCN  199 (372)
T ss_pred             CCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcC
Confidence            468899999999999999999999988754321                     1111                      


Q ss_pred             -----------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEeecCCCCcccC-CCceEEE
Q 019573          197 -----------------PNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDEKPHSLFKRD-GNDLVVT  257 (339)
Q Consensus       197 -----------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v~~h~~f~r~-g~DL~~~  257 (339)
                                       ++.+.++++|.||+|+++|++|+|+|+|++. +++.+|||+|+|+++||+.|+|+ |+||+++
T Consensus       200 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~  279 (372)
T PRK14296        200 GAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMT  279 (372)
T ss_pred             CcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEE
Confidence                             2345688999999999999999999999987 46779999999999999999995 8999999


Q ss_pred             EeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhh
Q 019573          258 QKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL  337 (339)
Q Consensus       258 l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~  337 (339)
                      ++|||+|||+|+++.|+||||+ ++|+||+++++|+++||+|+|||...+++.+|||||+|+|.||+.|+++|+++|+++
T Consensus       280 ~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l  358 (372)
T PRK14296        280 YNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQI  358 (372)
T ss_pred             EecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999997 999999999999999999999995544567899999999999999999999999998


Q ss_pred             C
Q 019573          338 I  338 (339)
Q Consensus       338 l  338 (339)
                      +
T Consensus       359 ~  359 (372)
T PRK14296        359 Y  359 (372)
T ss_pred             H
Confidence            7

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.7e-66  Score=496.38  Aligned_cols=297  Identities=34%  Similarity=0.575  Sum_probs=242.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      -.+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|+.||+||++++..+.++
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~   80 (372)
T PRK14286          2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG   80 (372)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCC
Confidence            037999999999999999999999999999999999865 5789999999999999999999999999999876532100


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                      .+.+   ++..|.+     .|  .++.|+|++|||+..  ++  .   + .+                     .+...++
T Consensus        81 ~~~~---~~~~~~~-----~~--~~~~d~f~~ffgg~~--~~--~---~-~~---------------------~~~~~~~  121 (372)
T PRK14286         81 FGQG---AYTDFSD-----IF--GDFGDIFGDFFGGGR--GG--G---S-GG---------------------GRRSGPQ  121 (372)
T ss_pred             CCCC---Ccccccc-----cc--cchhhHHHHhhCCCc--cC--C---C-cc---------------------cccCCCC
Confidence            0000   0010100     01  246789999997310  00  0   0 00                     0001235


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------------------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------------------------------  195 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------------------------------  195 (339)
                      ++.|+.+.|.|||+|+|+|++++|.+.+.+.|    |+|                                         
T Consensus       122 ~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~  201 (372)
T PRK14286        122 RGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTV  201 (372)
T ss_pred             CCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeE
Confidence            68999999999999999999999999765322    111                                         


Q ss_pred             -----------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEEEEeecCCCCcccCCCceEEEEeecHH
Q 019573          196 -----------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLV  263 (339)
Q Consensus       196 -----------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~  263 (339)
                                 .++.+.++++|.||+|+++|++|+|+|+|++.++ ..+|||||+|++++|+.|+|+|+||+++++|+|+
T Consensus       202 ~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~  281 (372)
T PRK14286        202 ISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLA  281 (372)
T ss_pred             ecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHH
Confidence                       0344568899999999999999999999999864 5679999999999999999999999999999999


Q ss_pred             HHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          264 EALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       264 ~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ||++|+++.|+|+||++++|+||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|+++|
T Consensus       282 eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~  355 (372)
T PRK14286        282 QAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLG-AYGKGDQHVIVKIEIPKKITRRQRELIEEFA  355 (372)
T ss_pred             HHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999999899999999999999999999999654 4468999999999999999999999999986

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=3.3e-66  Score=500.99  Aligned_cols=274  Identities=44%  Similarity=0.751  Sum_probs=236.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|++     .++|++|++||+||+||.+|+.||+||++++.++.   
T Consensus        27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~---   98 (421)
T PTZ00037         27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE---   98 (421)
T ss_pred             chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC---
Confidence            4799999999999999999999999999999999863     37999999999999999999999999987654210   


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                                  +        ..++.|+|+.|||++    .         .                       ...+++
T Consensus        99 ------------~--------~~d~~d~f~~~Fggg----~---------~-----------------------~~~~~r  122 (421)
T PTZ00037         99 ------------Q--------PADASDLFDLIFGGG----R---------K-----------------------PGGKKR  122 (421)
T ss_pred             ------------C--------CcchhhhHHHhhccc----c---------c-----------------------cccccC
Confidence                        0        014568898888731    0         0                       011346


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc--------------------CC--------------------------C
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID--------------------AS--------------------------G  195 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~--------------------g~--------------------------G  195 (339)
                      +.|+.+.|.|||+|+|+|++++|.+.+.+.|                    |+                          |
T Consensus       123 g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G  202 (421)
T PTZ00037        123 GEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQG  202 (421)
T ss_pred             CCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcc
Confidence            8899999999999999999999988654321                    11                          1


Q ss_pred             c---------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEee
Q 019573          196 R---------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI  260 (339)
Q Consensus       196 ~---------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I  260 (339)
                      +               ++.+.++++|.||+|+++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||+++++|
T Consensus       203 ~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~I  282 (421)
T PTZ00037        203 KIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKI  282 (421)
T ss_pred             eeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeC
Confidence            1               2345688999999999999999999999998888899999999999999999999999999999


Q ss_pred             cHHHHhcCcEEEEecCCCcEEEEEeCCc--cCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECC--CCCCHHHHHHHHh
Q 019573          261 SLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP--SKLTTEQKSGLKR  336 (339)
Q Consensus       261 ~l~~al~G~~~~i~~~~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P--~~l~~~~~~~l~~  336 (339)
                      ||+|||+|+++.|+||||+.|+|+||++  +++|++++|+|+|||..++++.+|||||+|+|.||  +.|+++|+++|++
T Consensus       283 sl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~  362 (421)
T PTZ00037        283 SLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKS  362 (421)
T ss_pred             CHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHH
Confidence            9999999999999999998899999976  99999999999999976544578999999999999  9999999999999


Q ss_pred             hCC
Q 019573          337 LIP  339 (339)
Q Consensus       337 ~lp  339 (339)
                      |||
T Consensus       363 l~~  365 (421)
T PTZ00037        363 LFP  365 (421)
T ss_pred             hcc
Confidence            986

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.9e-65  Score=487.47  Aligned_cols=294  Identities=35%  Similarity=0.559  Sum_probs=242.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|.++|++|++||+||+||.+|+.||+||++++.++.  
T Consensus         1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~--   77 (365)
T PRK14285          1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGG--   77 (365)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCC--
Confidence            678999999999999999999999999999999999865 57889999999999999999999999999988764321  


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                       +.+++.  ++|.++  +..|  .++.|+|++|||+..   +  .     ..                       ...++
T Consensus        78 -~~~~~~--~g~~~~--~~~~--~~~~d~f~~~fgg~~---~--~-----~~-----------------------~~~~~  117 (365)
T PRK14285         78 -GFEGFS--GGFSGF--SDIF--EDFGDIFDSFFTGNR---G--Q-----DK-----------------------NRKHE  117 (365)
T ss_pred             -CccccC--CCcccc--cccc--ccHHHHHHHhhcCCc---C--C-----CC-----------------------CcCCC
Confidence             110110  011110  0011  246688999887310   0  0     00                       01134


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CC-----------------Cc-----------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----AS-----------------GR-----------------------  196 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~-----------------G~-----------------------  196 (339)
                      ++.|+.++|.|||+|+|+|+++++.+.+.+.|    |+                 |.                       
T Consensus       118 ~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~  197 (365)
T PRK14285        118 KGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI  197 (365)
T ss_pred             CCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc
Confidence            68899999999999999999999999765422    11                 10                       


Q ss_pred             ------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEEEEeecCCCCcccCCCceEEEEeecHH
Q 019573          197 ------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLV  263 (339)
Q Consensus       197 ------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~  263 (339)
                                  .+.+.++++|.||||+++|++|+|+|+|++.++ ..+|||||+|++++|+.|+|+|+||+++++|||.
T Consensus       198 ~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~  277 (365)
T PRK14285        198 ISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFT  277 (365)
T ss_pred             cCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHH
Confidence                        245678999999999999999999999999865 5689999999999999999999999999999999


Q ss_pred             HHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          264 EALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       264 ~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |||+|+++.|+|+||++|+|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++++++|++++
T Consensus       278 eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~  351 (365)
T PRK14285        278 QAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILH-TEKFGNLILIIKIKTPKNLNSNAIKLLENLS  351 (365)
T ss_pred             HHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999998899999999999999999999999654 3457999999999999999999999999886

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-64  Score=487.74  Aligned_cols=313  Identities=29%  Similarity=0.440  Sum_probs=235.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++|+.+|||+|||+||++||||+|+.+ +.|+++|++|++||+|||||+||+.||+||+++..++...
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~   85 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGG   85 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccc
Confidence            458999999999999999999999999999999999865 5789999999999999999999999999997533211100


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                      .+..+.+++++|..+  .+.. ..+++++|+..++..  +          ++ +..+|+ .+|+.   +.+ ..+...++
T Consensus        86 ~~~~~~~~~~g~~~~--~~~~-~~d~~~~f~~~~~~~--~----------~~-f~d~f~-~~fg~---~~~-~~~~~~~~  144 (392)
T PRK14279         86 RRFDGGGGFGGFGTG--GDGA-EFNLNDLFDAAGRGG--G----------GG-IGDLFG-GLFNR---GGG-SARPSRPR  144 (392)
T ss_pred             ccccCCCCCCCcccc--cccc-CcChhhhhccccccc--c----------cc-hhhhhh-hhhcC---CCc-ccccCCCC
Confidence            000000000111000  0000 012223332221100  0          00 111111 11110   000 01112345


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------------------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------------------------------  195 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------------------------------  195 (339)
                      ++.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|                                         
T Consensus       145 ~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~  224 (392)
T PRK14279        145 RGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSI  224 (392)
T ss_pred             CCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEE
Confidence            78999999999999999999999998764321    111                                         


Q ss_pred             -----------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeecHH
Q 019573          196 -----------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLV  263 (339)
Q Consensus       196 -----------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~  263 (339)
                                 .++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.
T Consensus       225 i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~  304 (392)
T PRK14279        225 IEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFT  304 (392)
T ss_pred             eCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHH
Confidence                       034567899999999999999999999999986 45679999999999999999999999999999999


Q ss_pred             HHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          264 EALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       264 ~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      +|++|+++.|+|+||+ ++|+||+++++|+++||+|+|||..  .+.+|||||+|+|.||+.|+++|+++|++++
T Consensus       305 eAl~G~~~~v~~ldg~-i~v~Ip~g~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~  376 (392)
T PRK14279        305 ELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPNLDGAAAEALEAYA  376 (392)
T ss_pred             HHcCCceEEEEcCCce-EEEEECCCCCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999996 8999999999999999999999953  3568999999999999999999999999986

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.2e-64  Score=483.87  Aligned_cols=288  Identities=32%  Similarity=0.531  Sum_probs=239.2

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++||.+|||+|||+||++||||+|++  ++|+++|++|++||+||+||.+|+.||+||++...++   
T Consensus         1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~---   75 (378)
T PRK14278          1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG---   75 (378)
T ss_pred             CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc---
Confidence            77899999999999999999999999999999999984  5788999999999999999999999999997532110   


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                       +.+     ++|++     .|.  +++|+|++|||++    +. +     .+                      ....++
T Consensus        76 -~~~-----~g~~~-----~f~--~~~d~f~~ffgg~----g~-~-----~~----------------------~~~~~~  110 (378)
T PRK14278         76 -GGG-----GGFGG-----GFG--GLGDVFEAFFGGG----AA-S-----RG----------------------PRGRVR  110 (378)
T ss_pred             -CCC-----CCCCc-----CcC--chhHHHHHHhCCC----CC-C-----CC----------------------CccCCC
Confidence             000     00100     111  3568999998731    00 0     00                      001234


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc---------------------CCCc-----------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID---------------------ASGR-----------------------  196 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~---------------------g~G~-----------------------  196 (339)
                      ++.|+.+.|.|||+|+|+|+++++.+.+.+.|                     |+|.                       
T Consensus       111 ~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G  190 (378)
T PRK14278        111 PGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRG  190 (378)
T ss_pred             CCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCc
Confidence            68899999999999999999999998765321                     1111                       


Q ss_pred             ----------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEEEEeecCCCCcccCCCceEEEEe
Q 019573          197 ----------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIFIIDEKPHSLFKRDGNDLVVTQK  259 (339)
Q Consensus       197 ----------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~  259 (339)
                                      ++.+.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|+++||+.|+|+|+||+++++
T Consensus       191 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~  270 (378)
T PRK14278        191 VGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVS  270 (378)
T ss_pred             cceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEe
Confidence                            234568899999999999999999999999864 567999999999999999999999999999


Q ss_pred             ecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhCC
Q 019573          260 ISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       260 I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~lp  339 (339)
                      |+|++|++|+++.|+|+|+.+++|+||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|+++++
T Consensus       271 Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~  349 (378)
T PRK14278        271 VPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLR-SGGRGDLHAHVEVVVPTRLDHEDIELLRELKA  349 (378)
T ss_pred             cCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            99999999999999999776899999999999999999999999654 45689999999999999999999999999873

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3e-64  Score=483.58  Aligned_cols=285  Identities=35%  Similarity=0.535  Sum_probs=238.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++|+.+|||+|||+||++||||+|++  ..|+++|++|++||+||+||.+|+.||+||+++++++..  
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~--   79 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYS--   79 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccC--
Confidence            3799999999999999999999999999999999975  468899999999999999999999999999877653210  


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                       ..     .+|++  .  .|  .++.|+|++|||++    +  .     ..                       ...+++
T Consensus        80 -~~-----~~~~~--~--~~--~~~~d~f~~~Fgg~----~--~-----~~-----------------------~~~~~~  113 (377)
T PRK14298         80 -AE-----DIFRG--A--DF--GGFGDIFEMFFGGG----G--R-----RG-----------------------RMGPRR  113 (377)
T ss_pred             -cc-----ccccc--C--Cc--CcchhhhHhhhcCC----C--c-----cC-----------------------CCCCCC
Confidence             00     00101  0  11  13568899988731    0  0     00                       011346


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc----C-----------------CCc------------------------
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID----A-----------------SGR------------------------  196 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g-----------------~G~------------------------  196 (339)
                      +.|+.+.|.|||+|+|+|++++|.+.+.+.|    |                 +|.                        
T Consensus       114 g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  193 (377)
T PRK14298        114 GSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGR  193 (377)
T ss_pred             CCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCC
Confidence            8899999999999999999999999765422    1                 111                        


Q ss_pred             ---------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEeecCCCCcccCCCceEEEEee
Q 019573          197 ---------------PNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI  260 (339)
Q Consensus       197 ---------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I  260 (339)
                                     ++.+.++++|.||||+++|++|+|+|+|++. .++.+|||||+|+++||+.|+|+|+||+++++|
T Consensus       194 G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~I  273 (377)
T PRK14298        194 GQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPI  273 (377)
T ss_pred             CcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEe
Confidence                           2345688999999999999999999999997 567789999999999999999999999999999


Q ss_pred             cHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          261 SLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       261 ~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ||+||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||... +..+|||||+|+|.+|+.|+++++++|++++
T Consensus       274 sl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~  349 (377)
T PRK14298        274 SFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLH-GHGKGDQLVKVIVKTPTKLTQEQKELLREFD  349 (377)
T ss_pred             CHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999999997 89999999999999999999999654 3468999999999999999999999999886

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.7e-64  Score=484.33  Aligned_cols=299  Identities=38%  Similarity=0.593  Sum_probs=240.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|+.||+||++++..+..++
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ   82 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence            47999999999999999999999999999999999865 57889999999999999999999999999988765321100


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                      +  ++ +.++|+.+  ++.|...++.|+|++||+..  |++.       ..                     .+...+++
T Consensus        83 ~--~~-~~~g~~~~--~~~~~~~~~~d~f~~~F~~~--fgg~-------~~---------------------~~~~~~~k  127 (386)
T PRK14277         83 G--GF-GQGGFGGG--GFDFDFGGFGDIFEDIFGDF--FGTG-------RR---------------------RAETGPQK  127 (386)
T ss_pred             C--Cc-CCCCcccc--CccccccchhHHHHHhhccc--ccCC-------Cc---------------------CCCCCCCC
Confidence            0  00 00111000  11111123557888888621  1110       00                     00012346


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC------------------------------------------
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG------------------------------------------  195 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G------------------------------------------  195 (339)
                      +.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|                                          
T Consensus       128 g~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  207 (386)
T PRK14277        128 GADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGE  207 (386)
T ss_pred             CCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcc
Confidence            8999999999999999999999999866422    111                                          


Q ss_pred             --------------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEee
Q 019573          196 --------------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI  260 (339)
Q Consensus       196 --------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I  260 (339)
                                    .++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|
T Consensus       208 G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~I  287 (386)
T PRK14277        208 GKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPI  287 (386)
T ss_pred             eeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEc
Confidence                          023456889999999999999999999999864 56689999999999999999999999999999


Q ss_pred             cHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          261 SLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       261 ~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ||+||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+ +..+|||||+|+|.||+.|+++|+++|++++
T Consensus       288 sl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~  363 (386)
T PRK14277        288 TFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLR-GRGRGDQIVKVYIEVPKKLTEKQKELLREFE  363 (386)
T ss_pred             CHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence            9999999999999999997 89999999999999999999999654 3468999999999999999999999999986

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.5e-64  Score=482.90  Aligned_cols=291  Identities=34%  Similarity=0.532  Sum_probs=239.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|++  ..|+++|++|++||+||+||.+|+.||+||++++.++.+..
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~   80 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGG   80 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCC
Confidence            4799999999999999999999999999999999985  46889999999999999999999999999998775321100


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                       .++   +++|..   ...|  .++.|+|++|||++    +  +     ..                      ....+++
T Consensus        81 -~~~---~~~~~~---~~~~--~~~~d~f~~~fgg~----~--~-----~~----------------------~~~~~~~  118 (380)
T PRK14276         81 -AGG---FGGFDG---SGGF--GGFEDIFSSFFGGG----G--A-----RR----------------------NPNAPRQ  118 (380)
T ss_pred             -CCC---CCCccc---cccc--cchhhHHHHHhCcc----c--c-----cc----------------------CcCCCCC
Confidence             000   111100   0011  14678999998731    0  0     00                      0012346


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------c------------------------
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------R------------------------  196 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------~------------------------  196 (339)
                      +.|+.+.|.|||+|+|+|++++|.+.+.+.|    |+|                 .                        
T Consensus       119 g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  198 (380)
T PRK14276        119 GDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGT  198 (380)
T ss_pred             CCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCC
Confidence            8899999999999999999999998764321    111                 0                        


Q ss_pred             ---------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEee
Q 019573          197 ---------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI  260 (339)
Q Consensus       197 ---------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I  260 (339)
                                     ++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|
T Consensus       199 G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~I  278 (380)
T PRK14276        199 GKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPI  278 (380)
T ss_pred             CccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEec
Confidence                           23456889999999999999999999999985 45679999999999999999999999999999


Q ss_pred             cHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          261 SLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       261 ~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ||.||++|++++|+|++|+ ++|+||+++++|++++|+|+|||... ...+|||||+|+|.||+.|+++|+++|++++
T Consensus       279 sl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~  354 (380)
T PRK14276        279 SFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGAPKLR-GGGNGDQHVTVNIVTPTKLNDAQKEALKAFA  354 (380)
T ss_pred             CHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999999997 89999999999999999999999654 3467999999999999999999999999986

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.1e-64  Score=480.83  Aligned_cols=282  Identities=32%  Similarity=0.579  Sum_probs=237.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG   82 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (339)
                      +|||++|||+++||.+|||+|||+||++||||+|+.  ++|+++|++|++||++|+||.+|+.||+||++++.++.   +
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~---~   78 (371)
T PRK14287          4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF---G   78 (371)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc---C
Confidence            699999999999999999999999999999999975  47889999999999999999999999999987764321   0


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCC
Q 019573           83 ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKA  162 (339)
Q Consensus        83 ~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  162 (339)
                      .+   +++       .  |.  ++.|+|++|||+++   +        ..                      ....++++
T Consensus        79 ~~---~~~-------~--f~--~~~d~f~~~fgg~~---~--------~~----------------------~~~~~~~g  111 (371)
T PRK14287         79 GG---GAG-------D--FG--GFSDIFDMFFGGGG---G--------RR----------------------NPNAPRQG  111 (371)
T ss_pred             CC---CCc-------c--cc--chHHHHHhhhcccc---C--------CC----------------------CCCCCCCC
Confidence            00   000       1  11  35688999987310   0        00                      00113468


Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------c-------------------------
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------R-------------------------  196 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------~-------------------------  196 (339)
                      .|+.+.|.|||+|+|+|++++|.+.+.+.|    |+|                 .                         
T Consensus       112 ~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G  191 (371)
T PRK14287        112 ADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTG  191 (371)
T ss_pred             CCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCC
Confidence            899999999999999999999998765322    111                 0                         


Q ss_pred             --------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeec
Q 019573          197 --------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKIS  261 (339)
Q Consensus       197 --------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~  261 (339)
                                    .+.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++||
T Consensus       192 ~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is  271 (371)
T PRK14287        192 KIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLT  271 (371)
T ss_pred             ccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEecc
Confidence                          12345789999999999999999999999984 557899999999999999999999999999999


Q ss_pred             HHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          262 LVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       262 l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |+||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||... ...+|||||+|+|.+|+.|+.+|+++|++++
T Consensus       272 l~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~  346 (371)
T PRK14287        272 FPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVH-GRGQGDQHVQVRVVTPKNLTEKEKELMREFA  346 (371)
T ss_pred             HHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            999999999999999997 89999999999999999999999654 3468999999999999999999999999986

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-63  Score=480.63  Aligned_cols=302  Identities=31%  Similarity=0.529  Sum_probs=237.7

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc----cCccccCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ----YGEEGLKG   76 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~----~g~~~~~~   76 (339)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|+.||+    ||++++..
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~   85 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRP   85 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccccc
Confidence            567999999999999999999999999999999999865 5789999999999999999999999999    99876642


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCC
Q 019573           77 QMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSA  156 (339)
Q Consensus        77 ~~~~~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  156 (339)
                      +.   +.++        +  .+|.|   ++.++|..+++.. .++++       .+.+..+|+ .+|+   .+ +   ..
T Consensus        86 ~~---~~~~--------~--~~~~~---~~~~~f~~~~~~~-~~~~~-------~~~f~d~f~-~~fg---~~-~---~~  133 (389)
T PRK14295         86 GP---GGGG--------G--GGFNF---DLGDLFGGGAQGG-GGAGG-------GGGLGDVFG-GLFN---RG-G---RR  133 (389)
T ss_pred             CC---CCCC--------C--CCCCc---ccccccccccccc-ccccc-------ccchhhhhc-cccc---CC-C---CC
Confidence            10   0000        0  01111   2334444332211 00000       000111111 1111   00 0   11


Q ss_pred             ccccCCCCeEEEEeeChhhheeCceEEEEEEEEEEc--------------------------------------------
Q 019573          157 NALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVID--------------------------------------------  192 (339)
Q Consensus       157 ~~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~--------------------------------------------  192 (339)
                      ..++++.|+.+.|.|||+|+|+|++++|.+.+.+.|                                            
T Consensus       134 ~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G  213 (389)
T PRK14295        134 TQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKG  213 (389)
T ss_pred             CCCCCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcc
Confidence            224578999999999999999999999999764321                                            


Q ss_pred             -------------CCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEE
Q 019573          193 -------------ASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQ  258 (339)
Q Consensus       193 -------------g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l  258 (339)
                                   |.| ++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||++++
T Consensus       214 ~G~~~~~~C~~C~G~g-~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~  292 (389)
T PRK14295        214 RGLIADDPCLVCKGSG-RAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTV  292 (389)
T ss_pred             eeEEeccCCCCCCCCc-eEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEE
Confidence                         111 24567899999999999999999999999874 566899999999999999999999999999


Q ss_pred             eecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          259 KISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       259 ~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      +|||++|++|++++|+|+||++++|+||+++++|+++||+|+|||..  ++.+|||||+|+|.||+.|+++|+++|++++
T Consensus       293 ~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~--~~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~  370 (389)
T PRK14295        293 PVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRK--DGTRGDLLVTVEVAVPKDLSGKAREALEAFR  370 (389)
T ss_pred             eecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999999999999889999999999999999999999953  3568999999999999999999999999875

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-63  Score=479.31  Aligned_cols=287  Identities=33%  Similarity=0.567  Sum_probs=238.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG   82 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (339)
                      +|||+||||+++|+.+|||+|||+||++||||+|++  ..|+++|++|++||+||+||.+|+.||+||++++.++.+   
T Consensus         4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~---   78 (376)
T PRK14280          4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFG---   78 (376)
T ss_pred             CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcC---
Confidence            799999999999999999999999999999999985  468899999999999999999999999999887653210   


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCC
Q 019573           83 ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKA  162 (339)
Q Consensus        83 ~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  162 (339)
                      .++++ ..+|.+   +  |   +++|+|++|||++    +  .     ..                      ....++++
T Consensus        79 ~~~~~-~~~~~~---~--~---~~~d~f~~~fgg~----~--~-----~~----------------------~~~~~~kg  116 (376)
T PRK14280         79 GGGFG-GGDFGG---G--F---GFEDIFSSFFGGG----G--R-----RR----------------------DPNAPRQG  116 (376)
T ss_pred             CCCCC-CCCccc---c--c---cchhhHHHHhCCc----c--c-----cC----------------------cccccccc
Confidence            00000 001100   1  1   3568899998731    0  0     00                      00123468


Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------c-------------------------
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------R-------------------------  196 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------~-------------------------  196 (339)
                      .|+.+.|.|||+|+|+|++++|.+.+.+.|    |+|                 .                         
T Consensus       117 ~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  196 (376)
T PRK14280        117 ADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTG  196 (376)
T ss_pred             cCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCC
Confidence            899999999999999999999999765422    111                 0                         


Q ss_pred             --------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeec
Q 019573          197 --------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKIS  261 (339)
Q Consensus       197 --------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~  261 (339)
                                    .+.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++||
T Consensus       197 ~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is  276 (376)
T PRK14280        197 QEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLT  276 (376)
T ss_pred             ceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecC
Confidence                          23456889999999999999999999999975 457899999999999999999999999999999


Q ss_pred             HHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          262 LVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       262 l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |+||++|+++.|+|+||+ ++|+||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|++++
T Consensus       277 l~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~  351 (376)
T PRK14280        277 FAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVR-GYGQGDQYVVVRVVTPTKLTDRQKELLREFA  351 (376)
T ss_pred             HHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999999999999999996 89999999999999999999999654 3468999999999999999999999999986

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.8e-63  Score=480.95  Aligned_cols=303  Identities=33%  Similarity=0.532  Sum_probs=237.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG   82 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (339)
                      .|||+||||+++||.+|||+|||+||++||||+|+++ ..|+++|++|++||+||+||.+|+.||+||++++..+.+..+
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~   79 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG   79 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcC
Confidence            3899999999999999999999999999999999865 578999999999999999999999999999877642210000


Q ss_pred             CCCCCCCC-CCCCCCCccccCC--CCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccc
Q 019573           83 ASGFPGAG-AGAGGPTSFRFNT--RNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANAL  159 (339)
Q Consensus        83 ~~~~~~~~-~f~~~~~~~~f~~--~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  159 (339)
                      .++++++. .+..+..  .|..  ....|+|++||++.+   .         .     |+     .       ..+...+
T Consensus        80 ~~g~~~~~~~~~~~~~--~f~~~~~~~~d~f~~~fgg~g---~---------~-----~~-----~-------~~~~~~~  128 (391)
T PRK14284         80 GAGMGNMEDALRTFMG--AFGGEFGGGGSFFEGLFGGLG---E---------A-----FG-----M-------RGGPAGA  128 (391)
T ss_pred             CCCcCcccchhhhccc--cccccccccccchhhhccCcc---c---------c-----cc-----c-------cccCCCc
Confidence            01110000 0000000  0100  012356666665210   0         0     00     0       0000123


Q ss_pred             cCCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CC---------------------------------------Cc
Q 019573          160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVID----AS---------------------------------------GR  196 (339)
Q Consensus       160 ~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~---------------------------------------G~  196 (339)
                      +++.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+                                       |+
T Consensus       129 ~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~  208 (391)
T PRK14284        129 RQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGR  208 (391)
T ss_pred             CCCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCc
Confidence            568899999999999999999999999765322    11                                       10


Q ss_pred             -------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeecH
Q 019573          197 -------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISL  262 (339)
Q Consensus       197 -------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l  262 (339)
                                   ++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|||
T Consensus       209 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl  288 (391)
T PRK14284        209 VITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGF  288 (391)
T ss_pred             ccCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecH
Confidence                         24567899999999999999999999999986 5678999999999999999999999999999999


Q ss_pred             HHHhcCcEEEEecCC-CcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          263 VEALTGYTVQLTTLD-GRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       263 ~~al~G~~~~i~~~~-g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      +||++|++++|+|++ |+.++|+||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|++++
T Consensus       289 ~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~  364 (391)
T PRK14284        289 VDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVH-GKGRGDLLVRISVETPQNLSEEQKELLRQFA  364 (391)
T ss_pred             HHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999999999999998 56799999999999999999999999654 3468999999999999999999999999986

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.8e-63  Score=480.25  Aligned_cols=307  Identities=36%  Similarity=0.603  Sum_probs=240.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ..|+++|++|++||++|+||.+|+.||+||++++.+... 
T Consensus         1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~-   78 (397)
T PRK14281          1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAA-   78 (397)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccc-
Confidence            678999999999999999999999999999999999865 468899999999999999999999999999987653210 


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCccc---ccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIF---SEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSAN  157 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f---~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~  157 (339)
                        .++   ..+|+++  .+     +++|+|   ++|||+...+++        .. .. .|. ..++    +........
T Consensus        79 --~~~---~~~~~~~--~~-----~~~d~f~~f~~~Fgg~~~~~~--------~~-~~-~~~-~~~~----g~~~~~~~~  131 (397)
T PRK14281         79 --SGG---GPGYGGG--GG-----DFNDIFSAFNDMFGGGARRGG--------GS-PF-GFE-DVFG----GGGRRRRAS  131 (397)
T ss_pred             --cCC---CCCCCcC--CC-----CHHHHHHHHHHHhCCCccccc--------cc-cc-ccc-cccC----CCccccccc
Confidence              000   0001010  01     233444   577874211110        00 00 000 0000    000000001


Q ss_pred             cccCCCCeEEEEeeChhhheeCceEEEEEEEEEEc----C----------------CCc---------------------
Q 019573          158 ALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVID----A----------------SGR---------------------  196 (339)
Q Consensus       158 ~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g----------------~G~---------------------  196 (339)
                      .+.++.|+.+.|.|||+|+|+|++++|.+.+.+.|    |                .|.                     
T Consensus       132 ~~~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C  211 (397)
T PRK14281        132 AGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTC  211 (397)
T ss_pred             CCCCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCC
Confidence            22468999999999999999999999999765432    1                110                     


Q ss_pred             ------------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEE
Q 019573          197 ------------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       197 ------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~  257 (339)
                                        ++.++++++|.||+|+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++
T Consensus       212 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~  291 (397)
T PRK14281        212 GGEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYN  291 (397)
T ss_pred             cceeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEE
Confidence                              23456789999999999999999999999986 45799999999999999999999999999


Q ss_pred             EeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhh
Q 019573          258 QKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL  337 (339)
Q Consensus       258 l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~  337 (339)
                      ++|||.|||+|+++.|+|+||+ ++|+||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|+++
T Consensus       292 ~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l  369 (397)
T PRK14281        292 LAVSYPDLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKEVSHQDKELLKEL  369 (397)
T ss_pred             EEecHHHHhcCCeEEeecCCcc-EEEEeCCccCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence            9999999999999999999996 89999999999999999999999654 457899999999999999999999999998


Q ss_pred             C
Q 019573          338 I  338 (339)
Q Consensus       338 l  338 (339)
                      +
T Consensus       370 ~  370 (397)
T PRK14281        370 K  370 (397)
T ss_pred             H
Confidence            6

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-63  Score=478.51  Aligned_cols=289  Identities=34%  Similarity=0.584  Sum_probs=238.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||++++.++   +
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~---~   78 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN---G   78 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-hHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC---C
Confidence            58999999999999999999999999999999999865 5788999999999999999999999999998776431   0


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                      +.+   +   |.+...  .|  ..+.|+|++|||++    +.       .+                     .+...+++
T Consensus        79 ~~~---g---~~~~~~--~~--~~f~d~f~~~fg~g----~~-------~~---------------------~~~~~~~~  116 (373)
T PRK14301         79 GFG---G---FSSAED--IF--SHFSDIFGDLFGFS----GG-------GS---------------------RRGPRPQA  116 (373)
T ss_pred             CCC---C---cccccc--cc--cchHHHHHHHhhcc----Cc-------cc---------------------ccCCCCCC
Confidence            001   1   100000  01  12456677776521    00       00                     00012356


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC------------------------------------------
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG------------------------------------------  195 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G------------------------------------------  195 (339)
                      +.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|                                          
T Consensus       117 g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~  196 (373)
T PRK14301        117 GSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVI  196 (373)
T ss_pred             CCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeec
Confidence            8999999999999999999999998765321    111                                          


Q ss_pred             ----------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeecHHH
Q 019573          196 ----------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVE  264 (339)
Q Consensus       196 ----------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~  264 (339)
                                .++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|||++
T Consensus       197 ~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~e  276 (373)
T PRK14301        197 THPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQ  276 (373)
T ss_pred             CCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHH
Confidence                      024567899999999999999999999999875 567899999999999999999999999999999999


Q ss_pred             HhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          265 ALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       265 al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |++|+++.|+|+||+ ++|+||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|++++
T Consensus       277 Al~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~  348 (373)
T PRK14301        277 AALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLG-SSQKGDLLVEVSVVTPTKLTKRQEELLREFE  348 (373)
T ss_pred             HhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999999999999997 99999999999999999999999654 4568999999999999999999999999876

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-63  Score=477.64  Aligned_cols=293  Identities=35%  Similarity=0.603  Sum_probs=241.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|+.||+||++++..+.. .
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~-~   80 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGG-F   80 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCC-C
Confidence            47999999999999999999999999999999999865 578999999999999999999999999999887653210 0


Q ss_pred             CCCCCCCCCCCCCCCCccccCC-CCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           82 GASGFPGAGAGAGGPTSFRFNT-RNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~-~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                      +.+   +++   +    |.+.. .++.|+|++|||+.  +++.       ..                      +...++
T Consensus        81 ~~~---~~~---~----~~~~~~~~~~d~f~~~fgg~--~g~~-------~~----------------------~~~~~~  119 (380)
T PRK14297         81 GSG---GFG---G----FDFSDMGGFGDIFDSFFGGG--FGSS-------SR----------------------RRNGPQ  119 (380)
T ss_pred             CCC---CCC---C----cCcccccchhHHHHHHhccC--cccc-------cc----------------------ccCCCC
Confidence            000   111   1    11110 14668999999731  1000       00                      001234


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----C-----------------CCc-----------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----A-----------------SGR-----------------------  196 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g-----------------~G~-----------------------  196 (339)
                      ++.|+.+.|.|||+|+|+|++++|.+.+.+.|    |                 .|.                       
T Consensus       120 kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G  199 (380)
T PRK14297        120 RGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGG  199 (380)
T ss_pred             CCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCC
Confidence            68899999999999999999999998765322    1                 111                       


Q ss_pred             ----------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEe
Q 019573          197 ----------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQK  259 (339)
Q Consensus       197 ----------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~  259 (339)
                                      ++.+.++++|.||+|+++|++|+++|+|++.+ +..+|||||+|++.+|+.|+|+|+||+++++
T Consensus       200 ~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~  279 (380)
T PRK14297        200 SGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKH  279 (380)
T ss_pred             CceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEE
Confidence                            24566889999999999999999999999874 4568999999999999999999999999999


Q ss_pred             ecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhCC
Q 019573          260 ISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       260 I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~lp  339 (339)
                      |||+||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||... ++.+|||||+|+|.||+.|+++|+++|+++|+
T Consensus       280 Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~  357 (380)
T PRK14297        280 ISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGVPRVN-STGRGNQYVTVIVDIPKKLNSKQKEALTMFME  357 (380)
T ss_pred             eCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCcCCCC-CCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999996 89999999999999999999999654 45789999999999999999999999999874

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1e-62  Score=472.68  Aligned_cols=298  Identities=33%  Similarity=0.528  Sum_probs=238.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+..+|+++|++|++||+||+||.+|+.||+||.+++.....  
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~--   80 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQ--   80 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccc--
Confidence            479999999999999999999999999999999998654578999999999999999999999999999876542110  


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                      +.++.+++  |.....  .|......|+|++|||+.   ++        ..                     .+...+++
T Consensus        81 ~~~~~g~~--~~~~~~--~~~~~~~~d~f~~~fgg~---~~--------~~---------------------~~~~~~~~  124 (369)
T PRK14282         81 ETESGGGF--FEDIFK--DFENIFNRDIFDIFFGER---RT--------QE---------------------EQREYARR  124 (369)
T ss_pred             cCCCCCcc--cccccc--cccccccchhhhHhhccc---CC--------cc---------------------cccCCCCC
Confidence            00000000  100000  011000126677777621   00        00                     00012356


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc---------------------CCCc------------------------
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID---------------------ASGR------------------------  196 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~---------------------g~G~------------------------  196 (339)
                      +.|+.+.|.|||+|+|+|+++++.+.+.+.|                     |+|.                        
T Consensus       125 g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  204 (369)
T PRK14282        125 GEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGT  204 (369)
T ss_pred             CCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCc
Confidence            8999999999999999999999998765321                     1111                        


Q ss_pred             ---------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEee
Q 019573          197 ---------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI  260 (339)
Q Consensus       197 ---------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I  260 (339)
                                     ++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||||+|+++||+.|+|+|+||+++++|
T Consensus       205 G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~I  284 (369)
T PRK14282        205 GKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTI  284 (369)
T ss_pred             ceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEe
Confidence                           23456899999999999999999999999874 56789999999999999999999999999999


Q ss_pred             cHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          261 SLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       261 ~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ||.||++|+++.|+|+||++++|+||+++++|++++|+|+|||... .+.+|||||+|+|.+|+.|+++++++|++++
T Consensus       285 sl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~  361 (369)
T PRK14282        285 DYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKELA  361 (369)
T ss_pred             CHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999999998899999999999999999999999643 3568999999999999999999999999886

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9e-63  Score=472.62  Aligned_cols=288  Identities=38%  Similarity=0.632  Sum_probs=238.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG   82 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (339)
                      +|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|+.||+||++++.++    +
T Consensus         4 ~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~----~   78 (366)
T PRK14294          4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT----G   78 (366)
T ss_pred             CChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC----C
Confidence            7999999999999999999999999999999999865 4688999999999999999999999999999876521    0


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCC
Q 019573           83 ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKA  162 (339)
Q Consensus        83 ~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  162 (339)
                      .+   ++++|..     .|  .++.|+|++|||.+    +.+      ++              .       ....++++
T Consensus        79 ~~---~~~~~~~-----~~--~~~~d~f~~~fg~g----~~~------~~--------------~-------~~~~~~~g  117 (366)
T PRK14294         79 FS---GFSGFDD-----IF--SSFGDIFEDFFGFG----GGR------RG--------------R-------SRTAVRAG  117 (366)
T ss_pred             CC---CcCcccc-----ch--hhhhhhHHHhhccC----CCc------CC--------------c-------ccCCCCCC
Confidence            11   1111100     01  13567888888721    000      00              0       00123568


Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-------------------------------------------
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-------------------------------------------  195 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-------------------------------------------  195 (339)
                      .|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|                                           
T Consensus       118 ~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~  197 (366)
T PRK14294        118 ADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV  197 (366)
T ss_pred             CCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC
Confidence            899999999999999999999998765321    111                                           


Q ss_pred             ---------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEeecCCCCcccCCCceEEEEeecHHHH
Q 019573          196 ---------RPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEA  265 (339)
Q Consensus       196 ---------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~a  265 (339)
                               .++.+.++++|.||+|+++|++|+|+|+|++. .++.+|||+|+|++++|+.|+|+|+||+++++|||.||
T Consensus       198 ~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eA  277 (366)
T PRK14294        198 SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQA  277 (366)
T ss_pred             cCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHH
Confidence                     02456689999999999999999999999987 45678999999999999999999999999999999999


Q ss_pred             hcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          266 LTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       266 l~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      ++|+++.|+|+||+ ++|.||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++++++|++++
T Consensus       278 l~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  348 (366)
T PRK14294        278 ALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSLR-GGGRGDQIIEVEVKVPTRLTKKQEELLTEFA  348 (366)
T ss_pred             hCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999996 79999999999999999999999654 3468999999999999999999999999986

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.2e-63  Score=475.07  Aligned_cols=304  Identities=38%  Similarity=0.602  Sum_probs=241.6

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||++|||+++|+.+|||+|||+||++||||+|++  +.|+++|++|++||+||+||.+|+.||+||++++....+ 
T Consensus         1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~-   77 (382)
T PRK14291          1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQ-   77 (382)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccC-
Confidence            67899999999999999999999999999999999986  468899999999999999999999999999877653210 


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                       ..   .+..+|+    .+  ...++.|+|++||+.. .|++              +|+.. . . ..+.  ......++
T Consensus        78 -~~---~~~~~~~----~~--~~~~~~d~f~~~f~~f-g~~~--------------~fg~~-~-~-~~~~--~~~~~~~~  127 (382)
T PRK14291         78 -QQ---QGQEGFS----DF--GGGNIEDILEDVFDIF-GFGD--------------IFGRR-R-A-TRER--RKTYQRPV  127 (382)
T ss_pred             -cc---ccccccc----cc--cCCCHHHHHHHHHHhc-cccc--------------ccccc-c-c-cccc--cccccccc
Confidence             00   0001111    01  1124567888885410 0110              01100 0 0 0000  00011234


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------------------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------------------------------  195 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------------------------------  195 (339)
                      ++.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|                                         
T Consensus       128 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~  207 (382)
T PRK14291        128 KGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL  207 (382)
T ss_pred             CCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE
Confidence            78999999999999999999999999765432    211                                         


Q ss_pred             ----------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeecHHH
Q 019573          196 ----------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVE  264 (339)
Q Consensus       196 ----------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~  264 (339)
                                .++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||++++.|||+|
T Consensus       208 ~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~e  287 (382)
T PRK14291        208 REPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAE  287 (382)
T ss_pred             ccCCCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHH
Confidence                      024567899999999999999999999999874 678999999999999999999999999999999999


Q ss_pred             HhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCC--CCC------HHHHHHHHh
Q 019573          265 ALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPS--KLT------TEQKSGLKR  336 (339)
Q Consensus       265 al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~--~l~------~~~~~~l~~  336 (339)
                      |++|+++.|+|+||+.++|+||+++++|++++|+|+|||... ...+|||||+|+|.||+  .|+      ++++++|++
T Consensus       288 Al~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~-~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~  366 (382)
T PRK14291        288 AVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLK-GSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKE  366 (382)
T ss_pred             HhCCCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHH
Confidence            999999999999998899999999999999999999999654 34689999999999997  599      999999988


Q ss_pred             hC
Q 019573          337 LI  338 (339)
Q Consensus       337 ~l  338 (339)
                      |.
T Consensus       367 l~  368 (382)
T PRK14291        367 LD  368 (382)
T ss_pred             HH
Confidence            74

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-62  Score=457.95  Aligned_cols=282  Identities=37%  Similarity=0.636  Sum_probs=230.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|++  ..++++|++|++||++|+||.+|+.||+||+++...+..++
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~   80 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP   80 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCC
Confidence            5899999999999999999999999999999999974  47889999999999999999999999999987654221111


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                      ..++ .++++|.    ++.+  .+++|+|++|||+.++++++       +.    .+.     .    .     ...+++
T Consensus        81 ~~~~-~~~~~~~----~~~~--~~~~d~f~~~fgg~~~~~~~-------g~----~~~-----~----~-----~~~~~~  128 (291)
T PRK14299         81 PPGP-PGGGDFS----GFNV--GDFSDFFQQLFGGRGGFGGF-------GD----LFG-----S----V-----GRRARK  128 (291)
T ss_pred             CCCC-CCCCCcc----ccCc--CCHHHHHHHHhCCCCCCCCc-------cc----ccc-----c----c-----cCCCCC
Confidence            0000 0001110    1111  25678999999842111110       00    000     0    0     012357


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEee
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDE  241 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v  241 (339)
                      +.|+++++.|||+|++.||++++.+.       |      ++++|.||+|+++|++|+++|+|++.     |||+|+|++
T Consensus       129 g~dl~~~l~isL~ea~~G~~~~i~l~-------g------~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i~v  190 (291)
T PRK14299        129 GRDLEAELPLTLEEAYRGGEKVVEVA-------G------ERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRL  190 (291)
T ss_pred             CCCEEEEEEecHHHHhCCCeEEEeeC-------C------EEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEEEE
Confidence            89999999999999999999998764       3      47899999999999999999999973     999999999


Q ss_pred             cCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEE
Q 019573          242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK  321 (339)
Q Consensus       242 ~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~  321 (339)
                      ++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|+++||+|+|||..  ++.+|||||+|+|.
T Consensus       191 ~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~~V~  267 (291)
T PRK14299        191 LPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEVRIT  267 (291)
T ss_pred             cCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEEEEE
Confidence            99999999999999999999999999999999999995 9999999999999999999999953  35789999999999


Q ss_pred             CCCCCCHHHHHHHHhhC
Q 019573          322 FPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       322 ~P~~l~~~~~~~l~~~l  338 (339)
                      +|+.|+++++++|++++
T Consensus       268 ~P~~l~~~~~~~l~~l~  284 (291)
T PRK14299        268 IPTRPTPEEERLYKQLA  284 (291)
T ss_pred             CCCCCCHHHHHHHHHHH
Confidence            99999999999999875

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6e-62  Score=466.77  Aligned_cols=296  Identities=37%  Similarity=0.573  Sum_probs=241.6

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+++.++|.++|++|++||++|+||.+|+.||+||+.++.++   
T Consensus         1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~---   77 (365)
T PRK14290          1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAG---   77 (365)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccC---
Confidence            67899999999999999999999999999999999987645789999999999999999999999999998765421   


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                        .+++ ++.+|    .+  |  .+++|+|++|||+.  +++         . +   |+     ..  +.    ....++
T Consensus        78 --~~~~-~~~~~----~~--~--~~~~d~f~~~fg~~--~~~---------~-~---~~-----~~--~~----~~~~~~  120 (365)
T PRK14290         78 --GSNF-NWDNF----TH--F--SDINDIFNQIFGGN--FGS---------D-F---FS-----GF--GN----QQSTRN  120 (365)
T ss_pred             --CCCc-ccccc----cc--c--cchhHHHHHHhcCc--ccc---------c-c---cc-----cc--cc----ccCCCC
Confidence              0000 00000    01  1  25678999998831  100         0 0   00     00  00    001123


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----C----------------CC-------------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----A----------------SG-------------------------  195 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g----------------~G-------------------------  195 (339)
                      ++.|+.+.|.|||+|+|+|++++|.+.+.+.|    |                .|                         
T Consensus       121 ~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~  200 (365)
T PRK14290        121 IDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGR  200 (365)
T ss_pred             CCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCc
Confidence            47899999999999999999999998765322    1                11                         


Q ss_pred             --------------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEeec
Q 019573          196 --------------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKIS  261 (339)
Q Consensus       196 --------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~  261 (339)
                                    .++.+.++++|.||||+.+|++|+|+|+|+. +++.+|||||+|++++|+.|+|+|.||+++++||
T Consensus       201 G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Is  279 (365)
T PRK14290        201 GRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKIN  279 (365)
T ss_pred             eeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeC
Confidence                          0245668899999999999999999999986 6778999999999999999999999999999999


Q ss_pred             HHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhCC
Q 019573          262 LVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       262 l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~lp  339 (339)
                      |.+|++|+++.|+|++| +++|+||+++++|+++||+|+|||... ...+|||||+|+|.+|+.|+++++++|+++|+
T Consensus       280 l~eAl~G~~~~I~~~~g-~i~V~Ip~g~~~g~~iri~g~G~p~~~-~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~  355 (365)
T PRK14290        280 FPQAALGGEIEIKLFRE-KYNLKIPEGTQPGEVLKIKGAGMPHLN-GHGSGDLLVRINVEVPKRLTSKQKELIREFFD  355 (365)
T ss_pred             HHHHhCCCEEEEEcCCc-eEEEEECCccCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            99999999999999998 499999999999999999999999654 34689999999999999999999999999875

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.1e-62  Score=470.29  Aligned_cols=287  Identities=39%  Similarity=0.627  Sum_probs=236.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ ..|+++|++|++||++|+||.+|+.||+||++++..+.   
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~---   78 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG---   78 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC---
Confidence            47999999999999999999999999999999999865 46889999999999999999999999999987764320   


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                      +.+++   +   +. .  .|.+ .+.++|+.|||++    +        +.                      ....+++
T Consensus        79 ~~~~~---~---~~-~--~~~~-~f~~~f~~~fgg~----~--------~~----------------------~~~~~~~  114 (371)
T PRK10767         79 GGGGF---G---GG-G--GFGD-IFGDIFGDIFGGG----R--------GG----------------------GRQRARR  114 (371)
T ss_pred             CCCCC---C---Cc-c--cccc-chhhhhhhhccCC----c--------cc----------------------cCCCCCC
Confidence            00111   1   10 0  1110 1345666665420    0        00                      0012346


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC------------------------------------------
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG------------------------------------------  195 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G------------------------------------------  195 (339)
                      +.|+.+.|.|||+|+|+|++++|.+.+.+.|    |+|                                          
T Consensus       115 g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~  194 (371)
T PRK10767        115 GADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKII  194 (371)
T ss_pred             CCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeEC
Confidence            8899999999999999999999998765322    111                                          


Q ss_pred             ----------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEeecCCCCcccCCCceEEEEeecHHH
Q 019573          196 ----------RPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVE  264 (339)
Q Consensus       196 ----------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~  264 (339)
                                .++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||||+|++++|+.|+|+|+||++++.|||++
T Consensus       195 ~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~e  274 (371)
T PRK10767        195 KDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTT  274 (371)
T ss_pred             CCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHH
Confidence                      02455688999999999999999999999996 4567899999999999999999999999999999999


Q ss_pred             HhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          265 ALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       265 al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |++|+++.|+|+|| +++|+||+++++|++++|+|+|||... ++.+|||||+|+|.+|+.|+++++++|++++
T Consensus       275 Al~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~  346 (371)
T PRK10767        275 AALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVR-SGARGDLYCQVVVETPVNLTKRQKELLEEFE  346 (371)
T ss_pred             HhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999999 599999999999999999999999654 3568999999999999999999999999986

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.9e-62  Score=467.60  Aligned_cols=293  Identities=32%  Similarity=0.548  Sum_probs=238.9

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.  ..++++|++|++||++|+|+.+|+.||+||++++......
T Consensus         1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   78 (372)
T PRK14300          1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSR   78 (372)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccccc
Confidence            77999999999999999999999999999999999974  4688999999999999999999999999998776532100


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                      ++.+   +++   +      |. .++.++|++||+..  |++ +      +. .              .     ....+.
T Consensus        79 ~~~g---~~~---~------~~-~~~~~~f~~~f~~~--~gg-~------~~-~--------------~-----~~~~~~  116 (372)
T PRK14300         79 GGGG---NHG---G------FH-PDINDIFGDFFSDF--MGG-S------RR-S--------------R-----PTSSKV  116 (372)
T ss_pred             CCCC---CCC---c------cc-cchhhhHHHHHHhh--cCC-C------CC-C--------------C-----CCcCCC
Confidence            0000   001   1      11 12345666666521  111 0      00 0              0     001124


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC-----------------c-----------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG-----------------R-----------------------  196 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G-----------------~-----------------------  196 (339)
                      ++.|+.+.|.|||+|+++|+++++.+.+.+.|    |+|                 .                       
T Consensus       117 ~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~  196 (372)
T PRK14300        117 RGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQI  196 (372)
T ss_pred             CCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceE
Confidence            67899999999999999999999999775432    211                 0                       


Q ss_pred             ------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEeecCCCCcccCCCceEEEEeecHH
Q 019573          197 ------------PNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLV  263 (339)
Q Consensus       197 ------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~  263 (339)
                                  .+.+.++++|.||+|+++|++|+++|+|++. .++.+|||+|+|++++|+.|+|+|+||+++++|+|+
T Consensus       197 ~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~  276 (372)
T PRK14300        197 IKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFV  276 (372)
T ss_pred             eCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHH
Confidence                        2456788999999999999999999999987 466789999999999999999999999999999999


Q ss_pred             HHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          264 EALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       264 ~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      +|++|+++.|+|+||+.|+|+||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|++++
T Consensus       277 ~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~-~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~  350 (372)
T PRK14300        277 NAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMR-STIRGDMLTHIHVEVPKNLSKRQRELLEEFK  350 (372)
T ss_pred             HHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999998899999999999999999999999654 3468999999999999999999999999886

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=1.8e-60  Score=446.65  Aligned_cols=287  Identities=29%  Similarity=0.418  Sum_probs=238.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||++|||+++||.+|||+|||+||++||||+|+.  ..++++|++|++||++|+||.+|+.||+||......+..  
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~--   78 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFN--   78 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccc--
Confidence            3899999999999999999999999999999999875  468899999999999999999999999998642110000  


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                      +..+      ++++ ..+.  ..++.++|+.|||..   ++.       ..                       ...+++
T Consensus        79 ~~~~------~~~~-~~~~--~~~~~~~f~~~~g~~---~~~-------~~-----------------------~~~~~k  116 (306)
T PRK10266         79 RQFQ------HGDG-QSFN--AEDFDDIFSSIFGQH---ARQ-------SR-----------------------QRPAAR  116 (306)
T ss_pred             cccc------cCCC-CCCC--CCCHHHHHHHHhCCC---CCC-------CC-----------------------CCCCCC
Confidence            0000      0000 0111  125668888888731   000       00                       012346


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeee-eeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEE
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTT-EEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFII  239 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i  239 (339)
                      +.|+.+++.|||+|+++||++++.+.+.+|++.|.+..+ .++++|.||+|+++|++|+++|+|++.. +..+|||+|+|
T Consensus       117 g~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i  196 (306)
T PRK10266        117 GHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVI  196 (306)
T ss_pred             CCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEE
Confidence            889999999999999999999999999999877732222 3679999999999999999999999975 45689999999


Q ss_pred             eecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEE
Q 019573          240 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN  319 (339)
Q Consensus       240 ~v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~  319 (339)
                      +++||+.|+|+|+||+++++|||++|++|+++.|+|++|+ ++|+||+++++|+++||+|+|||..   +.+|||||+|+
T Consensus       197 ~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~---~~~GdL~v~~~  272 (306)
T PRK10266        197 HIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSK---KQTGDLYAVLK  272 (306)
T ss_pred             EEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCC---CCCCCEEEEEE
Confidence            9999999999999999999999999999999999999996 8999999999999999999999953   35899999999


Q ss_pred             EECCCCCCHHHHHHHHhhC
Q 019573          320 IKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       320 v~~P~~l~~~~~~~l~~~l  338 (339)
                      |.+|+.|+++|+++|++++
T Consensus       273 v~~P~~l~~~q~~l~~~l~  291 (306)
T PRK10266        273 IVMPPKPDEKTAALWQQLA  291 (306)
T ss_pred             EECCCCCCHHHHHHHHHHH
Confidence            9999999999999999875

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.8e-60  Score=458.47  Aligned_cols=289  Identities=37%  Similarity=0.568  Sum_probs=231.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||++|||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||++|+||.+|++||+||++++.+..   
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~---   78 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFS---   78 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccc---
Confidence            4799999999999999999999999999999999985  47899999999999999999999999999987654210   


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCC-CCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGF-SSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~-~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                      ..      +.|         ...++.++|..|++. ...|..               |+   |+   ++     ....++
T Consensus        79 ~~------~~~---------~~~~~~~~~~~~~~~~~~~f~~---------------~~---fg---g~-----~~~~~~  117 (378)
T PRK14283         79 QE------DIF---------NNINFEDIFQGFGFGIGNIFDM---------------FG---FG---GG-----SRHGPQ  117 (378)
T ss_pred             cc------ccc---------cccCccccccccccchhhhccc---------------cc---cC---CC-----CCCCcc
Confidence            00      000         000122333322210 000000               00   00   00     001134


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----C-----------------CCc-----------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----A-----------------SGR-----------------------  196 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g-----------------~G~-----------------------  196 (339)
                      ++.|+.+++.|||+|+|+|+++++.+.+.+.|    |                 .|.                       
T Consensus       118 kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G  197 (378)
T PRK14283        118 RGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQG  197 (378)
T ss_pred             CCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCc
Confidence            68899999999999999999999988765422    1                 111                       


Q ss_pred             ----------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEe
Q 019573          197 ----------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQK  259 (339)
Q Consensus       197 ----------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~  259 (339)
                                      ++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++
T Consensus       198 ~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~  277 (378)
T PRK14283        198 EGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKP  277 (378)
T ss_pred             cceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEe
Confidence                            23456889999999999999999999999974 5678999999999999999999999999999


Q ss_pred             ecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          260 ISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       260 I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |||++|++|+++.|+|+|| +|+|+||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|++++
T Consensus       278 Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~  354 (378)
T PRK14283        278 ISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMPSLR-WSGKGNLYVKVKVVVPKKLSPKQKELLREFA  354 (378)
T ss_pred             cCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence            9999999999999999999 699999999999999999999999654 3468999999999999999999999999886

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=2.1e-60  Score=455.36  Aligned_cols=291  Identities=37%  Similarity=0.605  Sum_probs=238.9

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCCC
Q 019573            4 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGA   83 (339)
Q Consensus         4 d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~   83 (339)
                      |||+||||+++|+.+|||+|||+||++||||+|+.  ..+.++|++|++||++|+|+.+|+.||+||++++.++..  +.
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~--~~   76 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGG--GG   76 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCc--CC
Confidence            79999999999999999999999999999999973  468899999999999999999999999999887653210  00


Q ss_pred             CCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCCC
Q 019573           84 SGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAA  163 (339)
Q Consensus        84 ~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  163 (339)
                      +  +++.+|..  +  .|  .++.|+|++|||+..  +.         + .                   .+...++++.
T Consensus        77 ~--~~~~~~~~--~--~~--~~~~~~f~~~fg~~~--g~---------~-~-------------------~~~~~~~~~~  117 (354)
T TIGR02349        77 G--GGFNGFDI--G--FF--GDFGDIFGDFFGGGG--GS---------G-R-------------------RRRSGPRRGE  117 (354)
T ss_pred             C--CCcCCccc--c--Cc--CchhhhHHHHhccCc--cc---------C-c-------------------cccCCCCCCC
Confidence            0  01111100  0  12  146688999987310  00         0 0                   0001245689


Q ss_pred             CeEEEEeeChhhheeCceEEEEEEEEEEc----CCC--------------------------------------------
Q 019573          164 PIERTLPCSLEDLYKGTTKKMKISRDVID----ASG--------------------------------------------  195 (339)
Q Consensus       164 d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G--------------------------------------------  195 (339)
                      |+.+.|.|||+|+|+|+++++.+.+.+.|    |+|                                            
T Consensus       118 d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~  197 (354)
T TIGR02349       118 DLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGK  197 (354)
T ss_pred             CeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcce
Confidence            99999999999999999999998765422    111                                            


Q ss_pred             ------------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEeecH
Q 019573          196 ------------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISL  262 (339)
Q Consensus       196 ------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l  262 (339)
                                  .++.+.++++|.||+|+++|++|+|+|+|++.. +..+|||+|+|++++|+.|+|+|+||++++.|||
T Consensus       198 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl  277 (354)
T TIGR02349       198 IIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISF  277 (354)
T ss_pred             ecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCH
Confidence                        024566889999999999999999999999864 5678999999999999999999999999999999


Q ss_pred             HHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhCC
Q 019573          263 VEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       263 ~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~lp  339 (339)
                      +|||+|+++.|+|+|| +++|.||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|+++|+
T Consensus       278 ~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~  352 (354)
T TIGR02349       278 TQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLR-GNGRGDLLVTVKVETPKNLSKEQKELLEELAE  352 (354)
T ss_pred             HHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999999999999 699999999999999999999999654 34789999999999999999999999999874

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.8e-60  Score=456.64  Aligned_cols=291  Identities=34%  Similarity=0.594  Sum_probs=238.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |..|||+||||+++||.+|||+|||+||++||||+|++  ..|+++|++|++||+||+||.+|+.||+||++++.++   
T Consensus         1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~---   75 (374)
T PRK14293          1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA---   75 (374)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC---
Confidence            77899999999999999999999999999999999975  4688999999999999999999999999998765421   


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALR  160 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~  160 (339)
                      .   ++.+++   +      +  .++.|+|++||++   |++.+.     .+          +         ..+...+.
T Consensus        76 ~---~~~~~~---~------~--~~~~d~f~~~fg~---~~~~~~-----~~----------~---------~~~~~~~~  114 (374)
T PRK14293         76 A---GFPDMG---D------M--GGFADIFETFFSG---FGGAGG-----QG----------G---------RRRRRGPQ  114 (374)
T ss_pred             C---CcCCcc---c------c--cchHHHHHHHhcc---cCCCCC-----CC----------c---------cccccCcc
Confidence            0   000000   0      1  1245788988873   111000     00          0         00001234


Q ss_pred             CCCCeEEEEeeChhhheeCceEEEEEEEEEEc----C-----------------CCc-----------------------
Q 019573          161 KAAPIERTLPCSLEDLYKGTTKKMKISRDVID----A-----------------SGR-----------------------  196 (339)
Q Consensus       161 ~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g-----------------~G~-----------------------  196 (339)
                      ++.|+.+.|.|||+|+|+|+++++.+.+.+.|    |                 +|.                       
T Consensus       115 kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G  194 (374)
T PRK14293        115 RGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNG  194 (374)
T ss_pred             CCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCc
Confidence            68899999999999999999999998764321    1                 111                       


Q ss_pred             ----------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEeecCCCCcccCCCceEEEEe
Q 019573          197 ----------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIIDEKPHSLFKRDGNDLVVTQK  259 (339)
Q Consensus       197 ----------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~  259 (339)
                                      ++.+.++++|.||||+++|++|+|+|+|++.. +..+|||+|+|++++|+.|+|+++||+++++
T Consensus       195 ~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~  274 (374)
T PRK14293        195 TGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIK  274 (374)
T ss_pred             ceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEec
Confidence                            13445788999999999999999999999874 5668999999999999999999999999999


Q ss_pred             ecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          260 ISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       260 I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |||.||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||.....+.+|||||+|+|.||+.|+++++++|+++|
T Consensus       275 Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~  352 (374)
T PRK14293        275 ISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLA  352 (374)
T ss_pred             cCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999999999996 8999999999999999999999975544568999999999999999999999999987

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.5e-59  Score=447.69  Aligned_cols=284  Identities=32%  Similarity=0.550  Sum_probs=235.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG   82 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (339)
                      .|||+||||+++||.+|||+|||+||++||||+|++  ..|+++|++|++||++|+||.+|+.||+||+++..+.   .+
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~---~~   76 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM---PG   76 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc---cC
Confidence            699999999999999999999999999999999975  4788999999999999999999999999998753210   00


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCC
Q 019573           83 ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKA  162 (339)
Q Consensus        83 ~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  162 (339)
                      .      +.|++    +.|   +++|+|++|||+. .+++        ..      .                ...+.++
T Consensus        77 ~------~~~~~----~~~---d~~d~f~~~fg~~-~~~~--------~~------~----------------~~~~~~g  112 (371)
T PRK14292         77 G------DPFGG----MGF---DPMDIFEQLFGGA-GFGG--------GR------G----------------RRGPARG  112 (371)
T ss_pred             C------cccCc----cCC---ChHHHHHHhhCCC-CcCC--------CC------C----------------cccccCC
Confidence            0      01111    112   4568999999831 0000        00      0                0113468


Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC------------------c------------------------
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVID----ASG------------------R------------------------  196 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G------------------~------------------------  196 (339)
                      .|+.+.+.|||+|+++|+++++.+.+.+.|    |+|                  .                        
T Consensus       113 ~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~  192 (371)
T PRK14292        113 DDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGE  192 (371)
T ss_pred             CCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCccc
Confidence            899999999999999999999999865322    111                  0                        


Q ss_pred             ---------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEeec
Q 019573          197 ---------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKIS  261 (339)
Q Consensus       197 ---------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~  261 (339)
                                     .+.+.++++|.||+|+++|++|+|+|+|++.+++. |||||+|++++|+.|+|+|+||++.++|+
T Consensus       193 G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~is  271 (371)
T PRK14292        193 GQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIG  271 (371)
T ss_pred             ceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEEEEEEecCCccccchhceeEEeccC
Confidence                           23346789999999999999999999999987665 99999999999999999999999999999


Q ss_pred             HHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhhC
Q 019573          262 LVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       262 l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~l  338 (339)
                      |+||++|+++.|+|++|+ +.|+||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|++++
T Consensus       272 l~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  346 (371)
T PRK14292        272 FAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQ-GAGTGDLIVEYEIAVPKQLSPEAREALEAYA  346 (371)
T ss_pred             HHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            999999999999999997 58999999999999999999999654 3467999999999999999999999999886

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.4e-59  Score=448.37  Aligned_cols=295  Identities=36%  Similarity=0.623  Sum_probs=235.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|+.||+||+++++++.   
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~---   79 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA---   79 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC---
Confidence            57999999999999999999999999999999999865 57899999999999999999999999999987664210   


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccc---cCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCcc
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEF---FGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANA  158 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~---fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~  158 (339)
                      +.++      |++  ..+     ++.++|+.|   |+..  |+++       .+ + ..+.        .+    .....
T Consensus        80 ~~~~------~~~--~~~-----~~~~~f~~f~~~fg~~--~gg~-------~~-~-~~~~--------~~----~~~~~  123 (386)
T PRK14289         80 GGGG------FSG--EGM-----SMEDIFSMFGDIFGGH--GGGF-------GG-F-GGFG--------GG----GSQQR  123 (386)
T ss_pred             CCCC------CCC--CCc-----ChhhhhHHhhhhhccc--ccCc-------cc-c-cccc--------cc----cccCC
Confidence            1111      101  011     233444332   4311  1000       00 0 0000        00    00112


Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CCC---------------------------------------
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVID----ASG---------------------------------------  195 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~G---------------------------------------  195 (339)
                      +.++.|+++.+.|||+|+|+|+++++++.+.+.|    |+|                                       
T Consensus       124 ~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C  203 (386)
T PRK14289        124 VFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTC  203 (386)
T ss_pred             CCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCC
Confidence            3468899999999999999999999999865432    111                                       


Q ss_pred             -----------------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEeecCCCCcccCCCceEEE
Q 019573          196 -----------------RPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       196 -----------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~  257 (339)
                                       .++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|++.||+++
T Consensus       204 ~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~  283 (386)
T PRK14289        204 NGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYN  283 (386)
T ss_pred             CccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEE
Confidence                             02445678999999999999999999999987 466789999999999999999999999999


Q ss_pred             EeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhh
Q 019573          258 QKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL  337 (339)
Q Consensus       258 l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~  337 (339)
                      +.|+|.+|++|+++.|+|++|+ ++|+||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|++|
T Consensus       284 ~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~q~~~l~~l  361 (386)
T PRK14289        284 LLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVN-GYGTGDLLVNVSVYIPETLSKEEKQTLEKM  361 (386)
T ss_pred             eccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEEEECCCCcCCCC-CCCCCcEEEEEEEEeCCCCCHHHHHHHHHH
Confidence            9999999999999999999995 89999999999999999999999654 346899999999999999999999999998


Q ss_pred             C
Q 019573          338 I  338 (339)
Q Consensus       338 l  338 (339)
                      +
T Consensus       362 ~  362 (386)
T PRK14289        362 E  362 (386)
T ss_pred             H
Confidence            6

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.9e-57  Score=419.42  Aligned_cols=271  Identities=48%  Similarity=0.815  Sum_probs=234.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      +..||+||||+++||.+|||+|||+||++||||+||+    +.++|++|++||||||||++|++||+||+++++++.   
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~---   75 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGG---   75 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccC---
Confidence            4689999999999999999999999999999999986    679999999999999999999999999999885431   


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                       ++         +++          .. |++||++    ++++       +                        ..+.+
T Consensus        76 -~~---------~g~----------~~-f~~~F~~----g~~~-------~------------------------~~~~r   99 (337)
T KOG0712|consen   76 -GG---------GGF----------GG-FSQFFGF----GGNG-------G------------------------RGRQR   99 (337)
T ss_pred             -CC---------CCC----------cc-HHHhccC----CCcC-------c------------------------ccccc
Confidence             00         110          01 7788872    1110       0                        11223


Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEc-----------------------------------------------CC
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVID-----------------------------------------------AS  194 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~-----------------------------------------------g~  194 (339)
                      +.|+.+.+.|||+|+|.|.++++.+.++.+|                                               |+
T Consensus       100 g~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~  179 (337)
T KOG0712|consen  100 GKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGS  179 (337)
T ss_pred             CCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCc
Confidence            8999999999999999999998888776442                                               11


Q ss_pred             C---------------ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEe
Q 019573          195 G---------------RPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQK  259 (339)
Q Consensus       195 G---------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~  259 (339)
                      |               +++.+.+.++|.|++|++++++|++.|++++.++..+||++|.|..++|+.|.|+++||++.++
T Consensus       180 G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~  259 (337)
T KOG0712|consen  180 GETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLT  259 (337)
T ss_pred             cccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceecccccceeee
Confidence            1               1355678899999999999999999999999988889999999999999999999999999999


Q ss_pred             ecHHHHhcCcEEEEecCCCcEEEEEeCC--ccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHhh
Q 019573          260 ISLVEALTGYTVQLTTLDGRTLTVPINS--VISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL  337 (339)
Q Consensus       260 I~l~~al~G~~~~i~~~~g~~i~v~i~~--~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~~~  337 (339)
                      |+|.||++|+.+.+.|+||+.+++.+++  ++++|++++|+|+|||+..++  +|||||+|+|+||+ +++++...|+++
T Consensus       260 i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~  336 (337)
T KOG0712|consen  260 ISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDL  336 (337)
T ss_pred             cchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhh
Confidence            9999999999999999999999998875  899999999999999988755  99999999999999 999999999988


Q ss_pred             C
Q 019573          338 I  338 (339)
Q Consensus       338 l  338 (339)
                      |
T Consensus       337 l  337 (337)
T KOG0712|consen  337 L  337 (337)
T ss_pred             C
Confidence            6

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.1e-42  Score=314.51  Aligned_cols=278  Identities=40%  Similarity=0.677  Sum_probs=223.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPP   81 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (339)
                      .+|||+||||+++|+..|||+||||||++||||+||++ +.|.+.|++|+.||+|||||.+|+.||+||++++....   
T Consensus        15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd-p~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~---   90 (336)
T KOG0713|consen   15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD-PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN---   90 (336)
T ss_pred             CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc---
Confidence            48999999999999999999999999999999999998 68999999999999999999999999999999987421   


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccC
Q 019573           82 GASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRK  161 (339)
Q Consensus        82 ~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~  161 (339)
                       ..    +.   ++.++        .++|+.||+.   |+.+.      ++.+                    ......+
T Consensus        91 -~~----~~---~g~~~--------~~~f~~~f~d---fg~~~------~g~~--------------------~~e~~~~  125 (336)
T KOG0713|consen   91 -KD----GE---GGGGG--------NDIFSAFFGD---FGVTV------GGNP--------------------LEEALPK  125 (336)
T ss_pred             -cc----cc---cCCcc--------cchHHHhhcc---ccccc------CCCc--------------------ccCCCCC
Confidence             00    00   10000        3677777762   11100      0100                    0112446


Q ss_pred             CCCeEEEEeeChhhheeCceEE----------EEEEEEEEc---------CCC----------------ceeeeeeEEEE
Q 019573          162 AAPIERTLPCSLEDLYKGTTKK----------MKISRDVID---------ASG----------------RPNTTEEILTI  206 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~----------i~~~~~~~~---------g~G----------------~~~~~~~~~~V  206 (339)
                      +.++...+..++++.|.|...+          +...++++|         +.|                +...++...++
T Consensus       126 g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~  205 (336)
T KOG0713|consen  126 GSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEV  205 (336)
T ss_pred             CceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceeecCCceee
Confidence            7888888888988888875422          111111111         111                23567788999


Q ss_pred             EeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeC
Q 019573          207 EIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPIN  286 (339)
Q Consensus       207 ~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~  286 (339)
                      .+..|...+....+..+|.+...+.+||+.+.+...+|+.|.+++.++++++.+++.+++.|....+.++++..+.+...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~  285 (336)
T KOG0713|consen  206 EFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRK  285 (336)
T ss_pred             eeeecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhh
Confidence            99999999999999999999888899999999999999999999999999999999999999999999999987788888


Q ss_pred             CccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCC-CCCH
Q 019573          287 SVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPS-KLTT  328 (339)
Q Consensus       287 ~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~-~l~~  328 (339)
                      .++.++..++.+++|||...+....|.++++|.+.+|. .++.
T Consensus       286 ~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  286 KITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             hccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence            89999999999999999777778899999999999995 4555

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=1.3e-33  Score=280.25  Aligned_cols=156  Identities=15%  Similarity=0.213  Sum_probs=144.6

Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEcCCC-ceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEe
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASG-RPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIID  240 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G-~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~  240 (339)
                      .-++.+.+.|||+++|+||+++|++.|.++|+.| +.+.+.++++|+||+|+++|++|+|+|+|+..+++. |||||+|+
T Consensus       656 ~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIk  734 (871)
T TIGR03835       656 NVNLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFK  734 (871)
T ss_pred             ccceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEE
Confidence            5688999999999999999999999999998877 345667899999999999999999999999876654 99999999


Q ss_pred             ecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEE
Q 019573          241 EKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI  320 (339)
Q Consensus       241 v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v  320 (339)
                      +++|+.|+|+|+||++.++|+|.+||+|+++.|+|+||+ ++|+||+++++|+++||+|+|||..  ++.+|||||+|.|
T Consensus       735 VKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~--~~~RGDLyV~f~V  811 (871)
T TIGR03835       735 VIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKT--KYDKGSLIVHLYY  811 (871)
T ss_pred             EcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCC--CCCCCCEEEEEEE
Confidence            999999999999999999999999999999999999996 9999999999999999999999943  3568999999999


Q ss_pred             E
Q 019573          321 K  321 (339)
Q Consensus       321 ~  321 (339)
                      .
T Consensus       812 ~  812 (871)
T TIGR03835       812 S  812 (871)
T ss_pred             e
Confidence            6

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=1.7e-28  Score=226.95  Aligned_cols=218  Identities=32%  Similarity=0.486  Sum_probs=141.1

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCCC
Q 019573            4 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPGA   83 (339)
Q Consensus         4 d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~   83 (339)
                      |||+||||+++|+..|||+||++||++||||.|++.  +|.++|++|.+|||+|+|+.+|+.||+++..+..+      .
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~------~  115 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGE------F  115 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcccc------c
Confidence            899999999999999999999999999999999874  89999999999999999999999999999754100      0


Q ss_pred             CCCCCCCCCCCCCCccccCCCCCCcccccccCC-CCCCCCCCCCCCCCCCCCCCCCCCccccc----------ccCCCCC
Q 019573           84 SGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGF-SSPFGDMGGSRASASGFPRGMFGDDIFAS----------FNRGSAG  152 (339)
Q Consensus        84 ~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~-~~~f~~~~~~~~~~~~~~~~~f~~~~~~~----------~~~~~~~  152 (339)
                      .         +          ++.++|..+|+. .....  .+.+....  ....|.++.++.          .+..+.+
T Consensus       116 ~---------g----------~~~~~~~~~~~~~~~~~~--~~~~~~~d--~~~~f~~A~~g~~~~~~~~~~~~~~t~~~  172 (288)
T KOG0715|consen  116 G---------G----------NPFDVFLEFFGGKMNKRV--PDKDQYYD--LSLDFKEAVRGSKKRISFNVLSDCETCFG  172 (288)
T ss_pred             c---------C----------CccchHHHhhcccccccc--cCcccccc--cccCHHHHhhccccceEEEeecccccccC
Confidence            0         0          344556666654 10000  00000000  000112222211          0111222


Q ss_pred             CCCCccc-------cCC---------CCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCC
Q 019573          153 EGSANAL-------RKA---------APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGT  216 (339)
Q Consensus       153 ~~~~~~~-------~~~---------~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~  216 (339)
                      .+.....       ..+         .++... +|   .-|.|....+.-.|..|.|.| .+...+.+.|.+|+|+.++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-~~---~~c~~~~~~~~~~c~~~~g~~-~v~~~k~i~i~~~~g~~~~~  247 (288)
T KOG0715|consen  173 SGAEEGAKRESCKTCSGRGLVSNPKEDPFILY-TC---SYCLGRGLVLRDNCQACSGAG-QVRRAKDIMIVLPAGVRSAD  247 (288)
T ss_pred             cCcccccccccchhhhCcccccccccCCccee-ec---ccccccceeccchHHHhhcch-hhhhheeEEeecCccccccc
Confidence            1100000       000         111111 11   112222222222233445666 57788999999999999999


Q ss_pred             EEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEEEeecHHH
Q 019573          217 KITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVE  264 (339)
Q Consensus       217 ~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~l~I~l~~  264 (339)
                      +|++.+.|..       ||+|.+.|.+++.|+|++.|+++.+.|++.|
T Consensus       248 ~l~~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  248 TLRFAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             EEEEecCCcc-------eEEEEEEeccCcccccccCcccccccccccC
Confidence            9999998864       9999999999999999999999999998753

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=7.8e-27  Score=217.24  Aligned_cols=290  Identities=54%  Similarity=0.866  Sum_probs=213.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPP   80 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~   80 (339)
                      |.+|||++|+|.++|+.++|++|||++|++||||+|+.....+.++|++|++||++|+|+.+|..||+||++++.+..  
T Consensus         1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~--   78 (306)
T KOG0714|consen    1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGG--   78 (306)
T ss_pred             CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCC--
Confidence            678999999999999999999999999999999999876345666899999999999999999999999986554310  


Q ss_pred             CCCCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc----cCCCCC----
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASF----NRGSAG----  152 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~----~~~~~~----  152 (339)
                       ...     ..+ .. ..+.+...+..++|..|||..+++.........    ....++...+...    ......    
T Consensus        79 -~~~-----~~~-~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (306)
T KOG0714|consen   79 -SFS-----SSF-TS-ELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRD----KNAAPGEEAFKSEGKAFQSLYGPKRKQ  146 (306)
T ss_pred             -CCC-----CCC-CC-CcceeccCchhhhHHHHhCCCCCCccccccCCc----cccccCccccccccccccccCCCcccc
Confidence             000     000 00 011223346678899999966665432000000    0000000000000    000000    


Q ss_pred             ---CCCCccccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCce-eeeeeEEEEEeCCCCcCCCEEEecCCCcCCC
Q 019573          153 ---EGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRP-NTTEEILTIEIKPGWKKGTKITFPEKGNELR  228 (339)
Q Consensus       153 ---~~~~~~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~-~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~  228 (339)
                         .......+....+...+.+++++.+.++.+...+.+......+.. ......+.+.+.+++..|+.+....+|+..+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (306)
T KOG0714|consen  147 YDSSGSDRSARQSPPVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEP  226 (306)
T ss_pred             cccccccccccCCCCccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccC
Confidence               000111223333666667799999999999999998877666643 4667788999999999999999999999887


Q ss_pred             CCCCccEEEEEeecCCCCcccCCCceEEE--EeecHHHHhcCcEEEEecCCCcEEEEEeC-CccCCCcEEEEccCCCCC
Q 019573          229 NVIPSDLIFIIDEKPHSLFKRDGNDLVVT--QKISLVEALTGYTVQLTTLDGRTLTVPIN-SVISPTYEEVIKGEGMPI  304 (339)
Q Consensus       229 ~~~~GDL~v~i~v~~h~~f~r~g~DL~~~--l~I~l~~al~G~~~~i~~~~g~~i~v~i~-~~~~~g~~~rl~g~G~p~  304 (339)
                      +..+-++++.+..++|..|.+.+.+|...  ..|++.+|++|+...++++++..+.+.+. ..+.++...+++++|+|.
T Consensus       227 ~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  227 GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            77788999999999999998899999999  89999999999999999999988888777 788999999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.87  E-value=2.1e-22  Score=152.38  Aligned_cols=81  Identities=48%  Similarity=0.707  Sum_probs=70.3

Q ss_pred             ceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Q 019573          253 DLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKS  332 (339)
Q Consensus       253 DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~  332 (339)
                      ||+++++|||+||++|++++|+|++|++++|++|+++++|+++||+|+|||...+++.+|||||+|+|.+|++||++||+
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            79999999999999999999999999999999999999999999999999977755689999999999999999999987


Q ss_pred             H
Q 019573          333 G  333 (339)
Q Consensus       333 ~  333 (339)
                      +
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            5

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=1.7e-20  Score=177.05  Aligned_cols=77  Identities=48%  Similarity=0.860  Sum_probs=72.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQ   77 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (339)
                      |.+.||++|||.++|+..|||++||+||++||||+||...++|+++|+.|+.||+|||||+.|++||.+.++.+.+.
T Consensus         6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~   82 (508)
T KOG0717|consen    6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK   82 (508)
T ss_pred             hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence            45789999999999999999999999999999999999889999999999999999999999999999988777654

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=2.3e-20  Score=165.95  Aligned_cols=72  Identities=57%  Similarity=1.006  Sum_probs=68.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK   75 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (339)
                      .|+|+||||+++|+.++||||||+||++||||+++++ +++.++|++||+||+||+||.+|..||.||+.++.
T Consensus        31 ~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~-P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   31 LDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN-PEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC-chhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            4799999999999999999999999999999999987 67899999999999999999999999999987664

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=2.8e-18  Score=152.82  Aligned_cols=226  Identities=29%  Similarity=0.392  Sum_probs=141.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccC-ccccCCCCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG-EEGLKGQMPP   80 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g-~~~~~~~~~~   80 (339)
                      ..+||+||||+++|+.+||++|||++|++||||+++.+...+.+.|+.|++||++|+|+.+|+.||+++ .....+..  
T Consensus         5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~--   82 (237)
T COG2214           5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKS--   82 (237)
T ss_pred             hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCcccc--
Confidence            479999999999999999999999999999999998763248899999999999999999999999984 22221110  


Q ss_pred             CCCCCCCCCCCCCCCCCccccCC-CCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccc
Q 019573           81 PGASGFPGAGAGAGGPTSFRFNT-RNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANAL  159 (339)
Q Consensus        81 ~~~~~~~~~~~f~~~~~~~~f~~-~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~  159 (339)
                        ..   ....       +.... ..+.+++...++........... ...   ....+............. .......
T Consensus        83 --~~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~  145 (237)
T COG2214          83 --YR---ESAA-------FPIEGSLQLTGLYEEWRGKRNKTERKASL-ADL---LSRGLSGLAAALSLFADE-AALRSGS  145 (237)
T ss_pred             --cc---cccc-------ccccccccHHHHHHhhcccccccccccch-hhh---cccccccccccccccccc-ccccccc
Confidence              00   0000       00000 02233343333321000000000 000   000000000000000000 0000000


Q ss_pred             cCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEE
Q 019573          160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFII  239 (339)
Q Consensus       160 ~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i  239 (339)
                      ....+....+.+++.+++.+....+.+.      ..      ....+.+|.++..+..+++.+.+.... ...++.+..+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  212 (237)
T COG2214         146 LRRRDLAANLADNFEEALAGVKKAVARL------LG------KALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKE  212 (237)
T ss_pred             ccccceeeeeeccHHHHhcCcceeeecc------cc------ccccccCCcccccCceeeecccCCcCC-CCcccceeee
Confidence            0111678889999999999988777664      12      233489999999999999999998877 7789999999


Q ss_pred             eecCCCCcccCCCceEEEEeecH
Q 019573          240 DEKPHSLFKRDGNDLVVTQKISL  262 (339)
Q Consensus       240 ~v~~h~~f~r~g~DL~~~l~I~l  262 (339)
                      .+.+|+.|...+.++   .++.+
T Consensus       213 ~~~~~~~~~~~~~~~---~~~~~  232 (237)
T COG2214         213 LSKRHPPFALEGDDK---YPVKL  232 (237)
T ss_pred             eccCCCCccccCCcc---cccch
Confidence            999999999999988   44444

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.78  E-value=1.3e-19  Score=171.26  Aligned_cols=73  Identities=55%  Similarity=1.018  Sum_probs=68.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNP--NNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK   75 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~--~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (339)
                      .|||.+|+|+++||.+||++|||++++-||||+..  +.++.|++.|+.|.+||||||||++|++||.||+++++
T Consensus         9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            58999999999999999999999999999999964  44678999999999999999999999999999999998

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=3.6e-19  Score=163.66  Aligned_cols=72  Identities=47%  Similarity=0.887  Sum_probs=68.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL   74 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (339)
                      ..|||+||||+.+||.+||++|||+.|++||||+||+++ .|.++|+.+.+||+||+|+.+|+.||+++....
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP-~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~   75 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDP-QAAEKFQELSEAYEVLSDEESRAAYDKLRKSGS   75 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcc
Confidence            479999999999999999999999999999999999995 599999999999999999999999999997654

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.75  E-value=8.8e-19  Score=126.45  Aligned_cols=64  Identities=48%  Similarity=0.917  Sum_probs=60.3

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhc
Q 019573            4 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYD   67 (339)
Q Consensus         4 d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd   67 (339)
                      |||+||||+++++.++|++||+++++++|||+++.....+.+.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987753468899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.75  E-value=1.2e-18  Score=177.89  Aligned_cols=72  Identities=38%  Similarity=0.678  Sum_probs=67.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK   75 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (339)
                      +++||+||||+++||..+||+|||+||++||||+|+.+  .|.++|++|++||+|||||.+|+.||+||..++.
T Consensus       572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~  643 (1136)
T PTZ00341        572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK  643 (1136)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence            46899999999999999999999999999999999874  5788999999999999999999999999987654

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.72  E-value=8.2e-18  Score=154.46  Aligned_cols=73  Identities=56%  Similarity=0.906  Sum_probs=65.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN--KKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      +|||.||||.++|+..||.+||||+|.+||||...+.  +..|+++|-.|..|-|||+||++|+.||. |++.++.
T Consensus       394 RDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~  468 (504)
T KOG0624|consen  394 RDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDP  468 (504)
T ss_pred             chHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCCh
Confidence            7999999999999999999999999999999987543  34789999999999999999999999998 6666653

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=8.2e-18  Score=146.29  Aligned_cols=69  Identities=49%  Similarity=0.896  Sum_probs=64.4

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN-NKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~-~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      +|+|+||||.++|+.++|++||++||++||||+++. +..+|.++|+.++.||.||+|.++|+.||..|.
T Consensus        14 ~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~   83 (264)
T KOG0719|consen   14 KDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS   83 (264)
T ss_pred             cCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence            689999999999999999999999999999999953 236899999999999999999999999999886

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.68  E-value=2.6e-17  Score=164.78  Aligned_cols=71  Identities=55%  Similarity=0.982  Sum_probs=66.3

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK   75 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (339)
                      +|||+||||+++|+.++||+|||+||++||||+++.  ..+.++|++|++||++|+||.+|+.||.||..+..
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d   72 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD   72 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence            699999999999999999999999999999999976  46788999999999999999999999999986654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.68  E-value=9.6e-17  Score=114.14  Aligned_cols=60  Identities=65%  Similarity=1.104  Sum_probs=54.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchh
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK   62 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~   62 (339)
                      +|||++|||+++++.++||+||++++++||||+++.....+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999999975336788999999999999999853

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.64  E-value=3.9e-16  Score=108.94  Aligned_cols=55  Identities=65%  Similarity=1.110  Sum_probs=51.7

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCC
Q 019573            4 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSD   59 (339)
Q Consensus         4 d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d   59 (339)
                      |||++|||+++++.++|++|||+|+++||||+++.. +.+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcC
Confidence            799999999999999999999999999999999764 5788999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.63  E-value=3.5e-16  Score=135.04  Aligned_cols=69  Identities=42%  Similarity=0.815  Sum_probs=64.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEE   72 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (339)
                      .|+|+||||++.||..|||+|||+|+++||||++|.. ++.++.|..|+.||+.|+|+..|+.|..||+.
T Consensus        99 fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~-~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P  167 (230)
T KOG0721|consen   99 FDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE-EGDEEFFEAIAKAYQALTDKKSRENWEKYGNP  167 (230)
T ss_pred             CCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc-chhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence            5899999999999999999999999999999999764 46778899999999999999999999999974

>PHA03102 Small T antigen; Reviewed

Probab=99.63  E-value=2.6e-16  Score=131.54  Aligned_cols=67  Identities=24%  Similarity=0.384  Sum_probs=61.3

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573            3 VDYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL   74 (339)
Q Consensus         3 ~d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (339)
                      +.+|+||||+++|  |.++||+|||++|+++|||++++     .++|++|++||++|+|+.+|..||.+|.+..
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~-----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~   73 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLRDLDGEEDSS   73 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch-----hHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence            3579999999999  99999999999999999999854     3799999999999999999999999997543

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.53  E-value=1.3e-14  Score=123.93  Aligned_cols=66  Identities=29%  Similarity=0.475  Sum_probs=57.9

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            3 VDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNN--KKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         3 ~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      .|||++|||++.  ++..+|+++||+|+++||||++.+.  +..+.+.+..||+||++|+||.+|+.|+.
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            699999999996  7899999999999999999998642  12344568899999999999999999975

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=8.6e-15  Score=137.46  Aligned_cols=66  Identities=58%  Similarity=0.976  Sum_probs=64.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      +|||.||||+++|+..||++|||++|+.||||++..++.+++.+|+++.+||.+|+||.+|..||.
T Consensus       373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds  438 (486)
T KOG0550|consen  373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS  438 (486)
T ss_pred             hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence            699999999999999999999999999999999988878999999999999999999999999997

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.51  E-value=2.1e-14  Score=123.41  Aligned_cols=66  Identities=30%  Similarity=0.491  Sum_probs=58.2

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            3 VDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNNK----KDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         3 ~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      .|||++|||++.  ++..+|+++||+|+++||||+.....    ..+.+.|+.||+||++|+||.+|+.|+-
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            389999999995  78899999999999999999975431    2367899999999999999999999985

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.48  E-value=1.5e-14  Score=127.32  Aligned_cols=65  Identities=37%  Similarity=0.700  Sum_probs=61.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhccc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQY   69 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (339)
                      .|+|++|||++.|+..||.+|||+||++||||++++.  ++.+.|+.|..||++|.|...|..||-+
T Consensus        33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~--e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP--ESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc--hhhhhhhhhhcccccccchhhHHhHHHH
Confidence            5899999999999999999999999999999999873  6679999999999999999999999964

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.45  E-value=1.4e-13  Score=118.71  Aligned_cols=67  Identities=30%  Similarity=0.409  Sum_probs=57.8

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            2 GVDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNNK----KDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         2 ~~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      ..|||++|||++.  ++..+|+++||+|+++||||+++...    ..+.+.++.||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            4699999999995  68999999999999999999986431    1245567999999999999999999985

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.43  E-value=2.2e-13  Score=117.04  Aligned_cols=67  Identities=25%  Similarity=0.424  Sum_probs=59.4

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            2 GVDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         2 ~~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      ..|||++|||++.  .+..+|+++||+|+++||||++...    +..+.+.++.||+||++|+||.+|+.|+-
T Consensus         3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            4689999999996  6789999999999999999997643    23467889999999999999999999985

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.35  E-value=7.5e-13  Score=105.16  Aligned_cols=51  Identities=29%  Similarity=0.496  Sum_probs=46.2

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLS   58 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~   58 (339)
                      .++|+||||+++||.+||++|||+|++++|||++.+     .+.|++|++||++|.
T Consensus        65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs-----~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS-----TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999998632     368899999999985

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.33  E-value=1.1e-12  Score=124.69  Aligned_cols=66  Identities=42%  Similarity=0.599  Sum_probs=62.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQY   69 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (339)
                      ..|.|.+|||+.+++.++||+.|||+|+..|||||..  +.|+|.|+.+..||++|+|+.+|..||.-
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~--~~A~Eafk~Lq~Afevig~~~kR~eYd~e  299 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI--PRAEEAFKKLQVAFEVIGDSVKRKEYDLE  299 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC--hhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence            3689999999999999999999999999999999985  58999999999999999999999999974

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.28  E-value=2.2e-12  Score=118.71  Aligned_cols=58  Identities=34%  Similarity=0.576  Sum_probs=51.3

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------ChHHHHHHHHHHHHHHhhcCCc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN------NKKDAEAKFKQISEAYDVLSDP   60 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~------~~~~~~~~f~~i~~Ay~~L~d~   60 (339)
                      .|+|++|||+++||.+|||+|||+|+++||||++.+      ..+.++++|++|++||++|+..
T Consensus       200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999632      1246899999999999999853

>PHA02624 large T antigen; Provisional

Probab=99.23  E-value=5.1e-12  Score=125.82  Aligned_cols=59  Identities=27%  Similarity=0.420  Sum_probs=55.2

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhh
Q 019573            3 VDYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVY   66 (339)
Q Consensus         3 ~d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (339)
                      +++|++|||+++|  +.++||+|||++|++||||++.+     .++|++|++||++|+|+.+|..|
T Consensus        11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd-----eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc-----HHHHHHHHHHHHHHhcHHHhhhc
Confidence            4789999999999  99999999999999999999742     47999999999999999999998

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.21  E-value=1.1e-11  Score=93.65  Aligned_cols=74  Identities=23%  Similarity=0.313  Sum_probs=58.4

Q ss_pred             CeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCC--CCccEEEEEee
Q 019573          164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV--IPSDLIFIIDE  241 (339)
Q Consensus       164 d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~--~~GDL~v~i~v  241 (339)
                      |+++++.|||.||+.|+++.+...      +|      +.++|.||+|+++|+.++++|+|.+...+  .+|||+|+++|
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V   68 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV   68 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence            688999999999999999988766      56      37999999999999999999999976433  69999999999


Q ss_pred             cCCCCccc
Q 019573          242 KPHSLFKR  249 (339)
Q Consensus       242 ~~h~~f~r  249 (339)
                      .-+..++.
T Consensus        69 ~~P~~ls~   76 (81)
T PF01556_consen   69 EFPKKLSP   76 (81)
T ss_dssp             E--SSTSH
T ss_pred             ECCCCCCH
Confidence            96665654

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.16  E-value=2.2e-11  Score=115.32  Aligned_cols=71  Identities=44%  Similarity=0.804  Sum_probs=65.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN----NKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG   73 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (339)
                      .|+|+||||+.+++..+||++||+|+.|+|||+-+.    .+++-++.+++|+.||+.|+|...|+.|-.||.-.
T Consensus        98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd  172 (610)
T COG5407          98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPD  172 (610)
T ss_pred             CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCC
Confidence            589999999999999999999999999999999654    35678899999999999999999999999999743

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.16  E-value=7.2e-11  Score=101.46  Aligned_cols=66  Identities=23%  Similarity=0.317  Sum_probs=57.8

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            3 VDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         3 ~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      .|||++|||++.  .+..++++.||+|.+++|||+....    +..+.+.-..||+||.+|+||.+|+.|=-
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL   73 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII   73 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence            799999999996  8999999999999999999996433    23466678999999999999999999853

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.13  E-value=8.9e-11  Score=113.29  Aligned_cols=87  Identities=18%  Similarity=0.197  Sum_probs=76.3

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v  237 (339)
                      .|++.|+++++.|||.||+.|+++.|...      +|+      .++|.||+|+++|++++|+|+|++.. +..+|||||
T Consensus       272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG~------~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V  339 (369)
T PRK14282        272 KRSGSDLIYDVTIDYLQAILGTTVEVPLP------EGG------TTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIV  339 (369)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCEEEEeCC------CCc------EEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999988765      553      68999999999999999999999874 346899999


Q ss_pred             EEeecCCCCcccCCCceEEE
Q 019573          238 IIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~~~  257 (339)
                      +|+|..|+.|++++.+|+..
T Consensus       340 ~~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        340 NVHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             EEEEECCCCCCHHHHHHHHH
Confidence            99999999999988777543

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.04  E-value=2.9e-10  Score=106.27  Aligned_cols=85  Identities=13%  Similarity=0.051  Sum_probs=74.0

Q ss_pred             cccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEE
Q 019573          158 ALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIF  237 (339)
Q Consensus       158 ~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v  237 (339)
                      -.|++.|+++++.|||.+|++|+++.|...      +|       .++|.||+|+++|++++++|+|++..++..|||||
T Consensus       196 f~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~~~v~ip~~~~~g~~~rl~g~G~p~~~~~~GDL~v  262 (291)
T PRK14299        196 FRLEGDDLYATVDVPAPIAVVGGKVRVMTL------DG-------PVEVTIPPRTQAGRKLRLKGKGWPRGPAGRGDQYA  262 (291)
T ss_pred             eEEECCEEEEEEecCHHHHhCCCEEEEECC------CC-------CEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCEEE
Confidence            356799999999999999999999888876      55       37999999999999999999999865556899999


Q ss_pred             EEeecCCCCcccCCCceE
Q 019573          238 IIDEKPHSLFKRDGNDLV  255 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~  255 (339)
                      +++|..|+.++.++.+++
T Consensus       263 ~~~V~~P~~l~~~~~~~l  280 (291)
T PRK14299        263 EVRITIPTRPTPEEERLY  280 (291)
T ss_pred             EEEEECCCCCCHHHHHHH
Confidence            999999988887776554

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.04  E-value=3.6e-10  Score=108.89  Aligned_cols=86  Identities=14%  Similarity=0.134  Sum_probs=75.8

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCC-CCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV-IPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v  237 (339)
                      .|.+.|+++++.|||.+|+.|+++.|...      .|       .++|.||+|+++|++++++|+|++.+++ .+|||||
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~~------~g-------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V  332 (365)
T PRK14290        266 QRINDDLYVDQKINFPQAALGGEIEIKLF------RE-------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLV  332 (365)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCEEEEEcC------Cc-------eEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence            46789999999999999999999988764      34       5899999999999999999999997543 5899999


Q ss_pred             EEeecCCCCcccCCCceEEE
Q 019573          238 IIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~~~  257 (339)
                      +|+|..|+.|++++.+|+.+
T Consensus       333 ~~~V~~P~~l~~~~~~ll~~  352 (365)
T PRK14290        333 RINVEVPKRLTSKQKELIRE  352 (365)
T ss_pred             EEEEECCCCCCHHHHHHHHH
Confidence            99999999999988877655

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.04  E-value=3.9e-10  Score=95.68  Aligned_cols=55  Identities=29%  Similarity=0.450  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhccc
Q 019573           15 AKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQY   69 (339)
Q Consensus        15 a~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (339)
                      .+..+|+++||+|+++||||+.+..    +..+.+.++.||+||++|+||.+|+.|+.-
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~   61 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS   61 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence            4789999999999999999985432    234778999999999999999999999864

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.03  E-value=4.1e-10  Score=108.40  Aligned_cols=85  Identities=21%  Similarity=0.299  Sum_probs=74.4

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCC-CCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV-IPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v  237 (339)
                      .|.+.||++++.|||.||+.|+++.|...      +|+      +++|.||+|+++|++++++|+|++.++. ..|||||
T Consensus       262 ~R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG~------~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V  329 (365)
T PRK14285        262 KRNGKDLYATLPISFTQAALGKEIKIQTI------ASK------KIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLIL  329 (365)
T ss_pred             EEeccceEEEEecCHHHHhCCCEEEEECC------CCC------EEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEE
Confidence            46789999999999999999999988876      553      6899999999999999999999997554 4699999


Q ss_pred             EEeecCCCCcccCCCceE
Q 019573          238 IIDEKPHSLFKRDGNDLV  255 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~  255 (339)
                      +|+|..|+.|++++..++
T Consensus       330 ~~~v~~P~~l~~~q~~~l  347 (365)
T PRK14285        330 IIKIKTPKNLNSNAIKLL  347 (365)
T ss_pred             EEEEECCCCCCHHHHHHH
Confidence            999999999988776544

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.03  E-value=4.5e-10  Score=108.30  Aligned_cols=86  Identities=17%  Similarity=0.212  Sum_probs=75.0

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++|+|+|+|++.++ ..+|||||
T Consensus       260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V  326 (366)
T PRK14294        260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII  326 (366)
T ss_pred             eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999988865      45       359999999999999999999998754 35899999


Q ss_pred             EEeecCCCCcccCCCceEEE
Q 019573          238 IIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~~~  257 (339)
                      +|+|..|+.|++++.+|+..
T Consensus       327 ~~~v~~P~~l~~~q~~ll~~  346 (366)
T PRK14294        327 EVEVKVPTRLTKKQEELLTE  346 (366)
T ss_pred             EEEEECCCCCCHHHHHHHHH
Confidence            99999999998887766544

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.98  E-value=7.2e-10  Score=107.16  Aligned_cols=87  Identities=16%  Similarity=0.187  Sum_probs=74.9

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|++.||++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||
T Consensus       261 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V  327 (377)
T PRK14298        261 ERVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLV  327 (377)
T ss_pred             EEEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999888765      55       278999999999999999999998744 35799999


Q ss_pred             EEeecCCCCcccCCCceEEEE
Q 019573          238 IIDEKPHSLFKRDGNDLVVTQ  258 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~~~l  258 (339)
                      +|+|..|+.+++++.+|+.++
T Consensus       328 ~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        328 KVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             EEEEECCCCCCHHHHHHHHHH
Confidence            999999988988887665443

>PRK10767 chaperone protein DnaJ; Provisional

Probab=98.97  E-value=8.9e-10  Score=106.50  Aligned_cols=86  Identities=15%  Similarity=0.174  Sum_probs=74.9

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.+|+.|+++.|...      +|       .++|.||+|+++|++++++|+|++..+ ..+|||||
T Consensus       258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v  324 (371)
T PRK10767        258 ERDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYC  324 (371)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence            46789999999999999999999988665      45       489999999999999999999998743 45799999


Q ss_pred             EEeecCCCCcccCCCceEEE
Q 019573          238 IIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~~~  257 (339)
                      +|+|..|+.|++++.+|+.+
T Consensus       325 ~~~v~~P~~l~~~~~~ll~~  344 (371)
T PRK10767        325 QVVVETPVNLTKRQKELLEE  344 (371)
T ss_pred             EEEEECCCCCCHHHHHHHHH
Confidence            99999998898888776554

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.97  E-value=1.1e-09  Score=106.59  Aligned_cols=86  Identities=17%  Similarity=0.199  Sum_probs=73.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCC-CceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDAS-GRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~-G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~  236 (339)
                      .|++.||++++.|||+||+.|++++|...      + |      ..++|.||+|+++|++++|+|+|++..+ ..+||||
T Consensus       274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d~g------~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~  341 (391)
T PRK14284        274 ERRGDDLILELPIGFVDAALGMKKEIPTL------LKE------GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLL  341 (391)
T ss_pred             eeecCCEEEEEEecHHHHhCCCeEEEeec------CCC------cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEE
Confidence            46799999999999999999999988765      2 2      3689999999999999999999999754 4689999


Q ss_pred             EEEeecCCCCcccCCCceEE
Q 019573          237 FIIDEKPHSLFKRDGNDLVV  256 (339)
Q Consensus       237 v~i~v~~h~~f~r~g~DL~~  256 (339)
                      |+|+|..++.++.+...++.
T Consensus       342 V~~~v~~P~~l~~~q~~ll~  361 (391)
T PRK14284        342 VRISVETPQNLSEEQKELLR  361 (391)
T ss_pred             EEEEEECCCCCCHHHHHHHH
Confidence            99999988888776655443

>PRK14287 chaperone protein DnaJ; Provisional

Probab=98.96  E-value=1.1e-09  Score=105.82  Aligned_cols=85  Identities=15%  Similarity=0.182  Sum_probs=72.8

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||
T Consensus       258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V  324 (371)
T PRK14287        258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHV  324 (371)
T ss_pred             EEecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEE
Confidence            46799999999999999999999888765      45       379999999999999999999998743 45799999


Q ss_pred             EEeecCCCCcccCCCceEE
Q 019573          238 IIDEKPHSLFKRDGNDLVV  256 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~~  256 (339)
                      +|+|..|+.++++...++.
T Consensus       325 ~~~v~~P~~l~~~q~~ll~  343 (371)
T PRK14287        325 QVRVVTPKNLTEKEKELMR  343 (371)
T ss_pred             EEEEEcCCCCCHHHHHHHH
Confidence            9999999888876655443

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.96  E-value=1.3e-09  Score=105.21  Aligned_cols=84  Identities=18%  Similarity=0.271  Sum_probs=72.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|++.|+++++.|||.+|+.|+++.|...      +|      +.++|.||+|+++|++|+++|+|++.++ ..+|||||
T Consensus       261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V  328 (372)
T PRK14300        261 KVDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLT  328 (372)
T ss_pred             EEecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999988875      44      2689999999999999999999998754 46899999


Q ss_pred             EEeecCCCCcccCCCce
Q 019573          238 IIDEKPHSLFKRDGNDL  254 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL  254 (339)
                      +|+|..|..++.+...+
T Consensus       329 ~~~v~~P~~ls~~qk~~  345 (372)
T PRK14300        329 HIHVEVPKNLSKRQREL  345 (372)
T ss_pred             EEEEECCCCCCHHHHHH
Confidence            99999888777655443

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.95  E-value=1.3e-09  Score=105.85  Aligned_cols=82  Identities=17%  Similarity=0.250  Sum_probs=70.2

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI  238 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~  238 (339)
                      .|++.||++++.|||.+|+.|.++.|...      +|       .++|.||+|+++|++|+++|+|++..++.+|||||+
T Consensus       289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~  355 (392)
T PRK14279        289 GRDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVT  355 (392)
T ss_pred             eeecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence            46799999999999999999999888765      45       479999999999999999999999766678999999


Q ss_pred             EeecCCCCcccCCCc
Q 019573          239 IDEKPHSLFKRDGND  253 (339)
Q Consensus       239 i~v~~h~~f~r~g~D  253 (339)
                      |+|.-++.++.+...
T Consensus       356 ~~v~~P~~Ls~~q~~  370 (392)
T PRK14279        356 VKVAVPPNLDGAAAE  370 (392)
T ss_pred             EEEECCCCCCHHHHH
Confidence            999977666554433

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.95  E-value=1.3e-09  Score=105.04  Aligned_cols=83  Identities=14%  Similarity=0.187  Sum_probs=72.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCC-CCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV-IPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v  237 (339)
                      .|.+.||++++.|||.||++|+++.|...      +|+      .++|.||+|+++|++++|+|+|++.++. ..|||||
T Consensus       254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG~------~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v  321 (369)
T PRK14288        254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KGD------ELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV  321 (369)
T ss_pred             EEeCCEEEEEEecCHHHHhcCCEEEeecC------CCC------EEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999988876      563      5899999999999999999999997654 4699999


Q ss_pred             EEeecCCCCcccCCCc
Q 019573          238 IIDEKPHSLFKRDGND  253 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~D  253 (339)
                      +|+|..|+.++.+...
T Consensus       322 ~~~v~~P~~ls~~q~~  337 (369)
T PRK14288        322 ELQVIYPKSLNKEQQE  337 (369)
T ss_pred             EEEEECCCCCCHHHHH
Confidence            9999988877766543

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.94  E-value=1.4e-09  Score=105.02  Aligned_cols=84  Identities=15%  Similarity=0.187  Sum_probs=72.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.+|+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||
T Consensus       260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I  326 (373)
T PRK14301        260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV  326 (373)
T ss_pred             eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999988765      45       389999999999999999999999754 35799999


Q ss_pred             EEeecCCCCcccCCCceE
Q 019573          238 IIDEKPHSLFKRDGNDLV  255 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~  255 (339)
                      +|+|..|+.++.+..+++
T Consensus       327 ~~~V~~P~~l~~~q~~~l  344 (373)
T PRK14301        327 EVSVVTPTKLTKRQEELL  344 (373)
T ss_pred             EEEEECCCCCCHHHHHHH
Confidence            999998887776665444

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.93  E-value=1.7e-09  Score=104.90  Aligned_cols=83  Identities=16%  Similarity=0.277  Sum_probs=70.5

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI  238 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~  238 (339)
                      .|.+.|+++++.|||.+|+.|++++|...      +|+      .++|.||+|+++|++|+|+|+|++..++.+|||||+
T Consensus       282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG~------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~  349 (389)
T PRK14295        282 GRSGDNLTVTVPVTFPEAALGAEVRVPTL------GGP------PVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVT  349 (389)
T ss_pred             EEecCCEEEEEeecHHHHhCCCeEEEECC------CCC------EEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEE
Confidence            46799999999999999999999888654      453      689999999999999999999999766668999999


Q ss_pred             EeecCCCCcccCCCc
Q 019573          239 IDEKPHSLFKRDGND  253 (339)
Q Consensus       239 i~v~~h~~f~r~g~D  253 (339)
                      |+|.-+..++.+...
T Consensus       350 ~~v~~P~~Ls~~qk~  364 (389)
T PRK14295        350 VEVAVPKDLSGKARE  364 (389)
T ss_pred             EEEECCCCCCHHHHH
Confidence            999976655554433

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=98.93  E-value=1.8e-09  Score=103.80  Aligned_cols=83  Identities=17%  Similarity=0.230  Sum_probs=71.6

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCC-CCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV-IPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v  237 (339)
                      .|++.|+++.+.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|++..++ .+|||||
T Consensus       263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i  329 (354)
T TIGR02349       263 ERDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLV  329 (354)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEE
Confidence            46789999999999999999999888765      45       5899999999999999999999997543 6899999


Q ss_pred             EEeecCCCCcccCCCce
Q 019573          238 IIDEKPHSLFKRDGNDL  254 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL  254 (339)
                      +|+|..++.++.++..+
T Consensus       330 ~~~v~~P~~l~~~~~~~  346 (354)
T TIGR02349       330 TVKVETPKNLSKEQKEL  346 (354)
T ss_pred             EEEEECCCCCCHHHHHH
Confidence            99999888887766443

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.91  E-value=1.4e-09  Score=92.91  Aligned_cols=66  Identities=35%  Similarity=0.657  Sum_probs=60.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYD   67 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd   67 (339)
                      +-|+|++|.|.+..+.++||+.||+|+...|||+|+++.+.|...|.-|..||..|-|+.-|...+
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~  117 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL  117 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            458999999999999999999999999999999999998889999999999999999999666543

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.89  E-value=2.3e-09  Score=101.59  Aligned_cols=84  Identities=17%  Similarity=0.227  Sum_probs=72.8

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v  237 (339)
                      .|.+.||+++++|++.+|++|.+++|+..      .|       .++|+||+|++.|++++|+|+|++. .+...|||||
T Consensus       260 ~R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v  326 (371)
T COG0484         260 ERDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYV  326 (371)
T ss_pred             EECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEE
Confidence            36789999999999999999999998877      56       3899999999999999999999997 4556799999


Q ss_pred             EEeecCCCCcccCCCceE
Q 019573          238 IIDEKPHSLFKRDGNDLV  255 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL~  255 (339)
                      +|.|.-+..++.+...|+
T Consensus       327 ~v~v~~P~~ls~~q~~lL  344 (371)
T COG0484         327 RVKVETPKNLSDEQKELL  344 (371)
T ss_pred             EEEEEcCCCCCHHHHHHH
Confidence            999998887776655543

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.89  E-value=3.2e-09  Score=102.57  Aligned_cols=84  Identities=15%  Similarity=0.155  Sum_probs=71.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.||++|+++.|...      +|+      .++|.||+|+++|++++++|+|++..+ ...|||||
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG~------~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V  333 (372)
T PRK14286        266 ERQGNDLILVRKISLAQAILGAEIEVPTI------DGK------KAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHV  333 (372)
T ss_pred             EEecCCEEEEEEECHHHHhCCCEEEEeCC------CCC------EEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEE
Confidence            46799999999999999999999888765      563      689999999999999999999998744 35799999


Q ss_pred             EEeecCCCCcccCCCce
Q 019573          238 IIDEKPHSLFKRDGNDL  254 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~DL  254 (339)
                      +|+|.-++.++.+...+
T Consensus       334 ~~~V~~P~~Ls~~qk~~  350 (372)
T PRK14286        334 IVKIEIPKKITRRQREL  350 (372)
T ss_pred             EEEEECCCCCCHHHHHH
Confidence            99999777666555443

>PRK14289 chaperone protein DnaJ; Provisional

Probab=98.89  E-value=4.5e-09  Score=102.09  Aligned_cols=85  Identities=20%  Similarity=0.259  Sum_probs=71.2

Q ss_pred             CCCceEEEEeecHHHHhcCcEEEEecC-----------------------------------------------------
Q 019573          250 DGNDLVVTQKISLVEALTGYTVQLTTL-----------------------------------------------------  276 (339)
Q Consensus       250 ~g~DL~~~l~I~l~~al~G~~~~i~~~-----------------------------------------------------  276 (339)
                      ++.|+.+.+.|||+|++.|+++.|...                                                     
T Consensus       126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G  205 (386)
T PRK14289        126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG  205 (386)
T ss_pred             CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence            578999999999999999998766431                                                     


Q ss_pred             -------------------CCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Q 019573          277 -------------------DGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLK  335 (339)
Q Consensus       277 -------------------~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~l~~~~~~~l~  335 (339)
                                         +.++++|+||+++++|++++|+|+|+|... +..+|||||+|+|..|+.++.+..+++.
T Consensus       206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~~GDL~v~v~v~~~~~f~r~g~DL~~  282 (386)
T PRK14289        206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKH-GGVNGDLLVVIEEEPHPELIRDENDLIY  282 (386)
T ss_pred             cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCC-CCCCccEEEEEEEecCCcccccccceeE
Confidence                               013588999999999999999999998543 4568999999999999999888777654

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.89  E-value=2.8e-09  Score=100.42  Aligned_cols=80  Identities=14%  Similarity=0.129  Sum_probs=69.5

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI  238 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~  238 (339)
                      .|.+.|+++++.|||.+|+.|+++.|...      .|       .++|.||+|+.+|++++++|+|++.++ ..|||||+
T Consensus       205 ~r~g~DL~~~~~Isl~~al~G~~~~i~~~------~g-------~v~v~ip~g~~~g~~~ri~g~G~p~~~-~~GdL~v~  270 (306)
T PRK10266        205 DIVGQDLEIVVPLAPWEAALGAKVTVPTL------KE-------SILLTIPPGSQAGQRLRVKGKGLVSKK-QTGDLYAV  270 (306)
T ss_pred             EEeCCceEEEEecCHHHHhCCCEEEeeCC------Cc-------cEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCEEEE
Confidence            46789999999999999999999988765      44       479999999999999999999998754 57999999


Q ss_pred             EeecCCCCcccCCC
Q 019573          239 IDEKPHSLFKRDGN  252 (339)
Q Consensus       239 i~v~~h~~f~r~g~  252 (339)
                      ++|..|+.++.+..
T Consensus       271 ~~v~~P~~l~~~q~  284 (306)
T PRK10266        271 LKIVMPPKPDEKTA  284 (306)
T ss_pred             EEEECCCCCCHHHH
Confidence            99999987765443

>PRK14293 chaperone protein DnaJ; Provisional

Probab=98.86  E-value=2.8e-09  Score=103.11  Aligned_cols=86  Identities=17%  Similarity=0.196  Sum_probs=74.5

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCC--CCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNV--IPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~--~~GDL~  236 (339)
                      .+++.|++++++|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|.+..++  ..||||
T Consensus       263 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~  329 (374)
T PRK14293        263 RRDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHL  329 (374)
T ss_pred             ChhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEE
Confidence            46789999999999999999999988876      56       2689999999999999999999997543  479999


Q ss_pred             EEEeecCCCCcccCCCceEEE
Q 019573          237 FIIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       237 v~i~v~~h~~f~r~g~DL~~~  257 (339)
                      |+|+|..|+.+++++.+++.+
T Consensus       330 v~~~v~~P~~l~~~~~~l~~~  350 (374)
T PRK14293        330 ITVKVKIPTRISDEERELLEK  350 (374)
T ss_pred             EEEEEECCCCCCHHHHHHHHH
Confidence            999999998888888766543

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.86  E-value=3.8e-09  Score=102.33  Aligned_cols=81  Identities=20%  Similarity=0.201  Sum_probs=69.2

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.||+.|++++|...      +|       .++|.||+|+++|++++++|+|++..+ ..+|||||
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V  332 (380)
T PRK14276        266 ERDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHV  332 (380)
T ss_pred             eeecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence            46799999999999999999999988775      45       379999999999999999999999754 45799999


Q ss_pred             EEeecCCCCcccCCC
Q 019573          238 IIDEKPHSLFKRDGN  252 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~  252 (339)
                      +|+|.-+..++.+..
T Consensus       333 ~~~v~~P~~l~~~q~  347 (380)
T PRK14276        333 TVNIVTPTKLNDAQK  347 (380)
T ss_pred             EEEEECCCCCCHHHH
Confidence            999997766655443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.85  E-value=4.5e-09  Score=101.67  Aligned_cols=81  Identities=15%  Similarity=0.186  Sum_probs=68.8

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.||++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ...|||||
T Consensus       263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v  329 (376)
T PRK14280        263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYV  329 (376)
T ss_pred             EEecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999888765      45       379999999999999999999998743 45799999


Q ss_pred             EEeecCCCCcccCCC
Q 019573          238 IIDEKPHSLFKRDGN  252 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~  252 (339)
                      +|+|..+..++.+..
T Consensus       330 ~~~v~~P~~Ls~~q~  344 (376)
T PRK14280        330 VVRVVTPTKLTDRQK  344 (376)
T ss_pred             EEEEECCCCCCHHHH
Confidence            999997766655443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.84  E-value=1e-08  Score=99.40  Aligned_cols=75  Identities=21%  Similarity=0.289  Sum_probs=65.9

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||+||+.|+++.|...      +|+      .++|.||+|+++|++|+|+|+|++..+ ..+|||||
T Consensus       271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG~------~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V  338 (382)
T PRK14291        271 ERRGDNLYLDVNITVAEAVLGTELEVPLL------DGK------KEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVV  338 (382)
T ss_pred             eeecCCeEEEEEeeHHHHhCCCEEEEecC------CCC------EEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            46789999999999999999999998875      563      689999999999999999999999754 35799999


Q ss_pred             EEeecCCC
Q 019573          238 IIDEKPHS  245 (339)
Q Consensus       238 ~i~v~~h~  245 (339)
                      +|+|.-+.
T Consensus       339 ~~~V~~P~  346 (382)
T PRK14291        339 RVHIDVPK  346 (382)
T ss_pred             EEEEEeCC
Confidence            99998554

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.84  E-value=5e-09  Score=102.01  Aligned_cols=81  Identities=19%  Similarity=0.197  Sum_probs=68.7

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|++.||++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ...|||||
T Consensus       282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V  348 (397)
T PRK14281        282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYV  348 (397)
T ss_pred             EEecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999888865      45       378999999999999999999998743 45799999


Q ss_pred             EEeecCCCCcccCCC
Q 019573          238 IIDEKPHSLFKRDGN  252 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~  252 (339)
                      +|+|.-+..++.+..
T Consensus       349 ~~~V~~P~~Ls~~qk  363 (397)
T PRK14281        349 RVNVFVPKEVSHQDK  363 (397)
T ss_pred             EEEEEcCCCCCHHHH
Confidence            999996665555443

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.81  E-value=6.9e-09  Score=100.59  Aligned_cols=80  Identities=19%  Similarity=0.114  Sum_probs=68.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|++..+ ..+|||||
T Consensus       268 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v  334 (380)
T PRK14297        268 KRKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYV  334 (380)
T ss_pred             EEeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEE
Confidence            46799999999999999999999888775      45       379999999999999999999998743 45799999


Q ss_pred             EEeecCCCCcccCC
Q 019573          238 IIDEKPHSLFKRDG  251 (339)
Q Consensus       238 ~i~v~~h~~f~r~g  251 (339)
                      +|+|.-+..++.+.
T Consensus       335 ~~~v~~P~~ls~~q  348 (380)
T PRK14297        335 TVIVDIPKKLNSKQ  348 (380)
T ss_pred             EEEEEcCCCCCHHH
Confidence            99999666555444

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.81  E-value=9.5e-09  Score=99.46  Aligned_cols=83  Identities=19%  Similarity=0.198  Sum_probs=68.8

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v  237 (339)
                      .|++.||++++.|||.+|+.|+++.|...      ++      ..++|.||+|+++|++++++|+|++.. +..+|||||
T Consensus       259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d~------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V  326 (378)
T PRK14278        259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI------LD------GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHA  326 (378)
T ss_pred             EEcCCCEEEEEecCHHHHhcCCeEEEecC------CC------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence            46799999999999999999999888754      22      268999999999999999999999874 345899999


Q ss_pred             EEeecCCCCcccCCCc
Q 019573          238 IIDEKPHSLFKRDGND  253 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~D  253 (339)
                      +|+|.-+..++.+...
T Consensus       327 ~~~V~~P~~Ls~~qk~  342 (378)
T PRK14278        327 HVEVVVPTRLDHEDIE  342 (378)
T ss_pred             EEEEEcCCCCCHHHHH
Confidence            9999966655554433

>PRK14292 chaperone protein DnaJ; Provisional

Probab=98.79  E-value=7.2e-09  Score=100.20  Aligned_cols=85  Identities=15%  Similarity=0.156  Sum_probs=72.0

Q ss_pred             cccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEE
Q 019573          158 ALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLI  236 (339)
Q Consensus       158 ~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~  236 (339)
                      -.|.+.|+++.+.|||.||+.|+++.|...      +|+       .+|.||+|+++|++++|+|+|++.. +..+||||
T Consensus       257 f~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG~-------~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~  323 (371)
T PRK14292        257 LRREQEHLIYEARIGFAKAALGGQITVPTL------DGP-------QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLI  323 (371)
T ss_pred             cccchhceeEEeccCHHHHhCCCeEEEECC------CCC-------EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEE
Confidence            346789999999999999999999988865      562       3699999999999999999999875 44579999


Q ss_pred             EEEeecCCCCcccCCCceE
Q 019573          237 FIIDEKPHSLFKRDGNDLV  255 (339)
Q Consensus       237 v~i~v~~h~~f~r~g~DL~  255 (339)
                      |+|+|..|+.++.+...|+
T Consensus       324 V~~~v~~P~~l~~~q~~ll  342 (371)
T PRK14292        324 VEYEIAVPKQLSPEAREAL  342 (371)
T ss_pred             EEEEEECCCCCCHHHHHHH
Confidence            9999999988877665443

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.77  E-value=1.2e-08  Score=99.17  Aligned_cols=82  Identities=17%  Similarity=0.180  Sum_probs=68.5

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.||++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ...|||||
T Consensus       275 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v  341 (386)
T PRK14277        275 KREGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIV  341 (386)
T ss_pred             EEecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            46789999999999999999999888765      56       279999999999999999999998743 35799999


Q ss_pred             EEeecCCCCcccCCCc
Q 019573          238 IIDEKPHSLFKRDGND  253 (339)
Q Consensus       238 ~i~v~~h~~f~r~g~D  253 (339)
                      +|+|.-+..++.+...
T Consensus       342 ~~~V~~P~~Ls~~qk~  357 (386)
T PRK14277        342 KVYIEVPKKLTEKQKE  357 (386)
T ss_pred             EEEEEeCCCCCHHHHH
Confidence            9999866555554433

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.76  E-value=1.3e-08  Score=98.38  Aligned_cols=81  Identities=16%  Similarity=0.094  Sum_probs=67.8

Q ss_pred             cC-CCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC--CCCCccEE
Q 019573          160 RK-AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR--NVIPSDLI  236 (339)
Q Consensus       160 ~~-~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~--~~~~GDL~  236 (339)
                      |+ +.||+++++|||.||+.|+++.|+..      +|       .++|.||+|+++|++++|+|+|++..  .+..||||
T Consensus       270 R~~G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~  336 (372)
T PRK14296        270 IINNNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLI  336 (372)
T ss_pred             EeCCCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEE
Confidence            54 78999999999999999999988876      56       27999999999999999999999842  33579999


Q ss_pred             EEEeecCCCCcccCCCc
Q 019573          237 FIIDEKPHSLFKRDGND  253 (339)
Q Consensus       237 v~i~v~~h~~f~r~g~D  253 (339)
                      |+++|.-++.++.+...
T Consensus       337 V~~~V~~P~~Ls~~q~~  353 (372)
T PRK14296        337 IKVNIVVPKNLSKKEKE  353 (372)
T ss_pred             EEEEEECCCCCCHHHHH
Confidence            99999976656554433

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.76  E-value=1.3e-08  Score=99.54  Aligned_cols=82  Identities=18%  Similarity=0.176  Sum_probs=69.2

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCC--CCCcc
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRN--VIPSD  234 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~--~~~GD  234 (339)
                      .|.+.||++++.|||.||++|.++.|...      +|+      .++|+||+|  +++|++++|+|+|++..+  ...||
T Consensus       270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG~------~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD  337 (421)
T PTZ00037        270 KREGGDLFITKKISLYEALTGFVFYITHL------DGR------KLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN  337 (421)
T ss_pred             EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CCC------eEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence            46799999999999999999999888766      663      589999999  999999999999999643  35799


Q ss_pred             EEEEEeecCC--CCcccCCC
Q 019573          235 LIFIIDEKPH--SLFKRDGN  252 (339)
Q Consensus       235 L~v~i~v~~h--~~f~r~g~  252 (339)
                      |||++.|.-+  ..++.+..
T Consensus       338 L~V~~~V~~P~~~~Ls~~qk  357 (421)
T PTZ00037        338 LYVTFEVIFPVDRKFTNEEK  357 (421)
T ss_pred             EEEEEEEEcCCCCCCCHHHH
Confidence            9999999866  55554443

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.75  E-value=5.6e-09  Score=93.25  Aligned_cols=68  Identities=37%  Similarity=0.539  Sum_probs=59.1

Q ss_pred             CCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            3 VDYYKILQVDR---NAKEEDLKKAYRKLAMKWHPDKNP--NNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         3 ~d~y~iLgv~~---~a~~~eIk~ayr~l~~~~hPd~~~--~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      .|+|.+|||+.   .|++.+|.+|.++.+.+||||+..  .+ ....+.|+.|..||+||+|+.+|.+||..-.
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~-~~~d~fFk~iqkA~evL~D~~~R~qyDS~df  115 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGN-KGCDEFFKLIQKAREVLGDRKLRLQYDSNDF  115 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCC-CCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence            58999999988   689999999999999999999962  11 2456889999999999999999999998543

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.75  E-value=1.7e-08  Score=97.80  Aligned_cols=80  Identities=16%  Similarity=0.151  Sum_probs=67.2

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIF  237 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v  237 (339)
                      .|.+.|+++++.|||.+|+.|+++.|...      .|       .++|.||+|+++|++++|+|+|++..+ ..+|||||
T Consensus       266 ~r~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v  332 (378)
T PRK14283        266 RREGANLYYEKPISFVQAALGDTVDVPTI------DG-------PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYV  332 (378)
T ss_pred             EEecCCEEEEEecCHHHHhcCCeEEEEcC------Cc-------eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            35789999999999999999999888754      44       489999999999999999999998743 45799999


Q ss_pred             EEeecCCCCcccCC
Q 019573          238 IIDEKPHSLFKRDG  251 (339)
Q Consensus       238 ~i~v~~h~~f~r~g  251 (339)
                      +|+|.-++..+.+.
T Consensus       333 ~~~v~~P~~l~~~q  346 (378)
T PRK14283        333 KVKVVVPKKLSPKQ  346 (378)
T ss_pred             EEEEEeCCCCCHHH
Confidence            99998555455444

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.37  E-value=3.2e-07  Score=80.37  Aligned_cols=54  Identities=33%  Similarity=0.676  Sum_probs=48.7

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHh-hcCC
Q 019573            4 DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYD-VLSD   59 (339)
Q Consensus         4 d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~-~L~d   59 (339)
                      .||+||||...|+.+|++.||.+||+++|||...+  +...+.|..|.+||. ||+.
T Consensus        48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~--~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE--EADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc--cccHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999865  456789999999999 7763

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.31  E-value=6.4e-07  Score=92.79  Aligned_cols=51  Identities=41%  Similarity=0.719  Sum_probs=44.2

Q ss_pred             CcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 019573            4 DYYKILQVDRN----AKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLS   58 (339)
Q Consensus         4 d~y~iLgv~~~----a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~   58 (339)
                      +-|+||.|+-+    -..+.||++|+|||.+|||||||+    -.++|..+++|||.|+
T Consensus      1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE----GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE----GREMFERVNKAYELLS 1336 (2235)
T ss_pred             HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHHHH
Confidence            46899998763    345899999999999999999984    4589999999999998

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.13  E-value=3.8e-06  Score=64.91  Aligned_cols=49  Identities=29%  Similarity=0.424  Sum_probs=43.0

Q ss_pred             cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 019573            7 KILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP   60 (339)
Q Consensus         7 ~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~   60 (339)
                      .||||+++++.+.||+|+|++....|||+..+.     -.-.+||||+++|...
T Consensus        60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP-----YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP-----YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHHHHHhcc
Confidence            589999999999999999999999999998653     3447899999999754

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.64  E-value=0.00014  Score=68.52  Aligned_cols=75  Identities=23%  Similarity=0.283  Sum_probs=65.4

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCCCCCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNVIPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~~~~GDL~  236 (339)
                      .|++.++.+.++++|.|+..|..+.+...      +|+      .+++.++||  +.+|+++++.|+|++..+...||||
T Consensus       248 ~Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dGr------~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~ly  315 (337)
T KOG0712|consen  248 DRRGSDLYRKLTISLVEALCGFQRVWETL------DGR------LLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLY  315 (337)
T ss_pred             eecccccceeeecchhhccccceEEEEcc------CCc------eEEEecCCCceeChhHEEeecCCCcccccCCCCcEE
Confidence            35689999999999999999988887743      564      799999999  9999999999999998655599999


Q ss_pred             EEEeecCCC
Q 019573          237 FIIDEKPHS  245 (339)
Q Consensus       237 v~i~v~~h~  245 (339)
                      |.+.|+-++
T Consensus       316 i~~~v~fp~  324 (337)
T KOG0712|consen  316 IKFEVKFPK  324 (337)
T ss_pred             EEEEEEcCC
Confidence            999998554

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.29  E-value=0.00021  Score=59.21  Aligned_cols=66  Identities=27%  Similarity=0.528  Sum_probs=52.9

Q ss_pred             CCcccccCC--CCCCCHHHHHHHHHHHHHHhCCCCCC----CChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            3 VDYYKILQV--DRNAKEEDLKKAYRKLAMKWHPDKNP----NNKKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         3 ~d~y~iLgv--~~~a~~~eIk~ayr~l~~~~hPd~~~----~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      ++||.++|.  +....+..+..-|.-..+++|||+..    ....-|.+.-.++|+||.+|.||-+|+.|=.
T Consensus         8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil   79 (168)
T KOG3192|consen    8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL   79 (168)
T ss_pred             HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            579999975  44567777777999999999999832    1123577889999999999999999999853

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.45  E-value=0.0017  Score=56.18  Aligned_cols=55  Identities=38%  Similarity=0.578  Sum_probs=46.6

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------ChHHHHHHHHHHHHHHhhc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN------NKKDAEAKFKQISEAYDVL   57 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~------~~~~~~~~f~~i~~Ay~~L   57 (339)
                      .+.|.+|++...++..+|+++|+++...+|||+-..      .-+.+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            478999999999999999999999999999997321      1246788999999999854

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.94  E-value=0.0049  Score=53.26  Aligned_cols=65  Identities=29%  Similarity=0.469  Sum_probs=50.3

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            4 DYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         4 d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      ||+..++..+.+  ..+.++..|+.++++||||+....    ...+.+.+..++.||.+|.+|-+|..|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            455566665533  556678899999999999996532    12356789999999999999999999865

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=95.10  E-value=0.029  Score=55.62  Aligned_cols=46  Identities=37%  Similarity=0.476  Sum_probs=33.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHhh
Q 019573           11 VDRNAKEEDLKKAYRKLAMKWHPDKNPNN------KKDAEAKFKQISEAYDV   56 (339)
Q Consensus        11 v~~~a~~~eIk~ayr~l~~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~   56 (339)
                      +..=.+.+++|+||||..+..||||-+..      +-.|++.|..+++|+..
T Consensus       396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            34457999999999999999999996542      23456666666666653

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=93.32  E-value=0.14  Score=41.83  Aligned_cols=52  Identities=23%  Similarity=0.281  Sum_probs=37.9

Q ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchh
Q 019573            6 YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK   62 (339)
Q Consensus         6 y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~   62 (339)
                      ..||+|++..+.++|.+.|.+|-...+|++..+     .-.=.+|..|.|.|..+.+
T Consensus        61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-----fYLQSKV~rAKErl~~El~  112 (127)
T PF03656_consen   61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS-----FYLQSKVFRAKERLEQELK  112 (127)
T ss_dssp             HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-----HHHHHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999998743     3445678889888875543

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF13446 RPT: A repeated domain in UCH-protein

Probab=88.87  E-value=0.99  Score=31.73  Aligned_cols=25  Identities=20%  Similarity=0.426  Sum_probs=23.1

Q ss_pred             cccccCCCCCCCHHHHHHHHHHHHH
Q 019573            5 YYKILQVDRNAKEEDLKKAYRKLAM   29 (339)
Q Consensus         5 ~y~iLgv~~~a~~~eIk~ayr~l~~   29 (339)
                      -|++|||+++++.+.|-.+|+....
T Consensus         7 Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    7 AYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999876

>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]

Probab=82.12  E-value=1.3  Score=42.28  Aligned_cols=55  Identities=36%  Similarity=0.532  Sum_probs=43.0

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573           14 NAKEEDLKKAYRKLAMKWHPDKNPN---NKKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus        14 ~a~~~eIk~ayr~l~~~~hPd~~~~---~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      -++..+|+.+|+..++..||++-..   ......+.|++|.+||++|++..+|...|.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~   60 (335)
T KOG0724|consen    3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS   60 (335)
T ss_pred             cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence            3678899999999999999998731   112567889999999999998665555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	339
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		3e-43
2qld_A	183	Human Hsp40 Hdj1 Length = 183		4e-43
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		5e-43
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		2e-30
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		4e-28
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		4e-28
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		6e-23
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		2e-22
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		4e-22
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		9e-20
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		1e-19
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-19
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-19
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-19
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		1e-16
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		1e-16
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		4e-16
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		9e-16
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		6e-15
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		3e-14
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		3e-14
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		4e-14
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		9e-14
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		6e-13
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		9e-13
1xao_A	121	Hsp40-Ydj1 Dimerization Domain Length = 121		1e-11
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		3e-11
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		4e-11
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		5e-11
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		5e-07
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		1e-05
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		5e-05
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		7e-05
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		8e-05
1iur_A	88	Dnaj Domain Of Human Kiaa0730 Protein Length = 88		6e-04

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/181 (45%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKI 218
           ++  P+   L  SLE++Y G TKKMKIS   ++  G+    E+ ILTIE+K GWK+GTKI
Sbjct: 9   KQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKI 68
Query: 219 TFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDG 278
           TFP++G++  N IP+D++F++ +KPH++FKRDG+D++   +ISL EAL G TV + TLDG
Sbjct: 69  TFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDG 128
Query: 279 RTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           RT+ V    VI P     + GEG+P+PK P KRG+L I+F + FP ++    ++ L++++
Sbjct: 129 RTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 188
Query: 339 P 339
           P
Sbjct: 189 P 189

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 83/181 (45%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
Query: 160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKI 218
           ++  P+   L  SLE++Y G TKKMKIS   ++  G+    E+ ILTIE+K GWK+GTKI
Sbjct: 2   KQDPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKI 61
Query: 219 TFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDG 278
           TFP++G++  N IP+D++F++ +KPH++FKRDG+D++   +ISL EAL G TV + TLDG
Sbjct: 62  TFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDG 121
Query: 279 RTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLI 338
           RT+ V    VI P     + GEG+P+PK P KRG+L I+F + FP ++    ++ L++++
Sbjct: 122 RTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 181
Query: 339 P 339
           P
Sbjct: 182 P 182

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score =  171 bits (433), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPE 222
           P+   L  SLE++Y G TKKMKIS   ++  G+    E+ ILTIE+K GWK+GTKITFP+
Sbjct: 4   PVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPK 63
Query: 223 KGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLT 282
           +G++  N IP+D++F++ +KPH++FKRDG+D++   +ISL EAL G TV + TLDGRT+ 
Sbjct: 64  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 123
Query: 283 VPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           V    VI P     + GEG+P+PK P KRG+L I+F + FP ++    ++ L++++P
Sbjct: 124 VVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 180

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Query: 166 ERTLPCSLEDLYKGTTKKMKISRD-VIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKG 224
           E  L  +LE+LY G  KK+K++R   I+   R    E I+ +EIKPGWK GTK+T+  +G
Sbjct: 7   EVPLLVTLEELYLGKRKKIKVTRKRFIEHKVR--NEENIVEVEIKPGWKDGTKLTYSGEG 64
Query: 225 N-ELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTV 283
           + E     P DL+ II  K H  F RD   L+    I LV ALTG+T  +TTLD R L +
Sbjct: 65  DQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIXKVTIPLVRALTGFTCPVTTLDNRNLQI 124
Query: 284 PINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLK 335
           PI  +++P   +++  EG PI  +P ++G+L ++F+I FP  LT EQK  +K
Sbjct: 125 PIKEIVNPKTRKIVPNEGXPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK 176

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 165 IERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKG 224
           ++  LP SLEDL+ G  K  KI R      G    T+  + I++KPGWK GTKIT+  +G
Sbjct: 3   VQVNLPVSLEDLFVGKKKSFKIGRK--GPHGASEKTQ--IDIQLKPGWKAGTKITYKNQG 58
Query: 225 N-ELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTV 283
           +   +      L F+I EK H  FKRDG+DL+ T  +S  E+L G++  + T+DGRTL +
Sbjct: 59  DYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPL 118
Query: 284 PINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGL 334
                + P+      G+GMP PK PS+RGNL +K+ + +P  L   QK  +
Sbjct: 119 SRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 98/171 (57%), Gaps = 5/171 (2%)
Query: 165 IERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKG 224
           ++  LP SLEDL+ G  K  KI R      G    T+  + I++KPGWK GTKIT+  +G
Sbjct: 3   VQVNLPVSLEDLFVGKKKSFKIGRK--GPHGASEKTQ--IDIQLKPGWKAGTKITYKNQG 58
Query: 225 N-ELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTV 283
           +   +      L F+I EK H  FKRDG+DL+ T  +S  E+L G++  + T+DGRTL +
Sbjct: 59  DYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPL 118
Query: 284 PINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGL 334
                + P+      G+GMP PK PS+RGNL +K+ + +P  L   QK  +
Sbjct: 119 SRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/196 (35%), Positives = 103/196 (52%), Gaps = 20/196 (10%)
Query: 152 GEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTT--------EEI 203
           G+G     R+  P+ +       D+  GT        D+ID   R  +          +I
Sbjct: 62  GQGIKFVTRQMGPMIQRFQTEC-DVCHGTG-------DIIDPKDRCKSCNGKKVENERKI 113
Query: 204 LTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLV 263
           L + ++PG K G +I F  + ++  +VIP D++FI+ E+PH  FKRDG+DLV   +I L+
Sbjct: 114 LEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLL 173
Query: 264 EALTGYTVQLTTLDGRTLTVPI--NSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK 321
            A+ G    L  + G  L V I    VI+P   +VI+G+GMPIPK     GNL IKF IK
Sbjct: 174 TAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-GGYGNLIIKFTIK 232
Query: 322 FPSKLTTEQKSGLKRL 337
            P    T +++ LK+L
Sbjct: 233 DPENHFTSEEN-LKKL 247

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/68 (66%), Positives = 58/68 (85%)
Query: 3  VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
          VDYY++L V R A  E +KKAYRKLA+KWHPDKNP NK++AE +FKQ++EAY+VLSD +K
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68
Query: 63 RAVYDQYG 70
          R +YD+YG
Sbjct: 69 RDIYDRYG 76

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 60/72 (83%)
Query: 5  YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
          YY+IL V R+A  +D+KKAYR+ A++WHPDKNP+NK+ AE KFK+++EAY+VLSD  KR 
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 65 VYDQYGEEGLKG 76
          +YD+YG EGL G
Sbjct: 64 IYDRYGREGLTG 75

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 44/75 (58%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Query: 2  GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
          G DYY+ L + R A +E++K+AYR+ A+++HPDKN   +  AE KFK+I+EAYDVLSDP+
Sbjct: 2  GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDPR 59
Query: 62 KRAVYDQYGEEGLKG 76
          KR ++D+YGEEGLKG
Sbjct: 60 KREIFDRYGEEGLKG 74

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/67 (62%), Positives = 58/67 (86%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          +YY++L V  +A  ED+KKAYRKLA++WHPDKNP+NK++AE KFK +SEAY+VLSD +KR
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69
Query: 64 AVYDQYG 70
          ++YD+ G
Sbjct: 70 SLYDRAG 76

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V + A+E +++KAY++LAMK+HPD+N  + K+AEAKFK+I EAY+VL+D QKR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 AVYDQYGEEGLK 75
          A YDQYG    +
Sbjct: 63 AAYDQYGHAAFE 74

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V + A+E +++KAY++LAMK+HPD+N  + K+AEAKFK+I EAY+VL+D QKR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 AVYDQYGEEGLK 75
          A YDQYG    +
Sbjct: 63 AAYDQYGHAAFE 74

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/67 (62%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V + A+E +++KAY++LAMK+HPD+N  + K+AEAKFK+I EAY+VL+D QKR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 AVYDQYG 70
          A YDQYG
Sbjct: 63 AAYDQYG 69

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
Query: 5  YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
          YY +L V  NA +E+LKKAYRKLA+K+HPDKNPN  +    KFKQIS+AY+VLSD +KR 
Sbjct: 8  YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRE 63
Query: 65 VYDQYGEE 72
          +YD+ GE+
Sbjct: 64 LYDKGGEQ 71

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/73 (52%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 2  GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
          G   Y +L +D+NA  +D+KK+YRKLA+K+HPDKNP+N + A+ KFK+I+ A+ +L+D  
Sbjct: 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAAD-KFKEINNAHAILTDAT 74
Query: 62 KRAVYDQYGEEGL 74
          KR +YD+YG  GL
Sbjct: 75 KRNIYDKYGSLGL 87

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V R A +EDLKKAYR+LA+K+HPDK  N+   A   FK I  AY VLS+P+KR
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDK--NHAPGATEAFKAIGTAYAVLSNPEKR 65
Query: 64 AVYDQYG 70
            YDQ+G
Sbjct: 66 KQYDQFG 72

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 5  YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
          YY +L V  +A + +LKKAYRK+A+K+HPDKNP    D   +FKQIS+AY+VLSD +KR 
Sbjct: 10 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNP----DGAEQFKQISQAYEVLSDEKKRQ 65
Query: 65 VYDQYGEE 72
          +YDQ GEE
Sbjct: 66 IYDQGGEE 73

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 134/328 (40%), Gaps = 61/328 (18%)
Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY IL V      + +K AYR+LA K+HPD +  N  DAEAKFK ++EA++VL D Q+R
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRR 86
Query: 64  AVYDQYGEEGLKGQMXXXXXXXXXXXXXXXXXXTSFRFNTRNPEDIXXXXXXXXXXXXDM 123
           A YDQ                                +  RN                D 
Sbjct: 87  AEYDQL-------------------------------WQHRN----------------DP 99
Query: 124 GGSRASAS---GFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGT 180
           G  R   +    + +  F D IF+S     A +       +   +E  +   LE+     
Sbjct: 100 GFGRQRQTHEQSYSQQDFDD-IFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQ 158
Query: 181 TKKMKISRDVIDASGRPNT-TEEILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFI 238
           T+ +  +  V +  G   + T + L ++I  G   G +I    +G    N  P+ DL  +
Sbjct: 159 TRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLV 218
Query: 239 IDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTL-DGRTLTVPINSVISPTYEEVI 297
           I   PH LF   G++L +   ++  EA  G  V + TL +   LTVP  S         I
Sbjct: 219 IHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLR--I 276
Query: 298 KGEGMPIPKEPSKRGNLRIKFNIKFPSK 325
           KG+G+      +  G+L     I  P+K
Sbjct: 277 KGKGL---VSKTHTGDLFAVIKIVMPTK 301

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Query: 5  YYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA 64
          YY IL V ++A E  +KKA+ KLAMK+HPDKN +   DAEAKF++I+EAY+ LSD  +R 
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRK 66
Query: 65 VYDQYGEEGL---KGQ 77
           YD  G       KGQ
Sbjct: 67 EYDTLGHSAFTSGKGQ 82

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 1  MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
          +  D Y++L V R A + D+KKAY+KLA +WHPDKN +    AE +F QIS+AY++LS+ 
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNE 72
Query: 61 QKRAVYDQYG 70
          +KR  YD YG
Sbjct: 73 EKRTNYDHYG 82

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V RNA ++++KKAY +LA K+HPD N ++ K A+ KF Q++EAY+VLSD  KR
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPK-AKEKFSQLAEAYEVLSDEVKR 66
Query: 64 AVYDQYG 70
            YD YG
Sbjct: 67 KQYDAYG 73

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Query: 6  YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAV 65
          Y +L V  +A E++LKK YRK A+K+HPDK   + +    KFK+ISEA+++L+DPQKR +
Sbjct: 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE----KFKEISEAFEILNDPQKREI 66
Query: 66 YDQYGEEGLK 75
          YDQYG E  +
Sbjct: 67 YDQYGLEAAR 76

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          ++Y +L V + A   ++++A++KLA+K HPDKNPNN  +A   F +I+ AY+VL D   R
Sbjct: 22 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLR 80
Query: 64 AVYDQYGEEGLK 75
            YD+YGE+GL+
Sbjct: 81 KKYDKYGEKGLE 92

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          ++Y +L V + A   ++++A++KLA+K HPDKNPNN  +A   F +I+ AY+VL D   R
Sbjct: 3  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLR 61
Query: 64 AVYDQYGEEGLK 75
            YD+YGE+GL+
Sbjct: 62 KKYDKYGEKGLE 73

>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain Length = 121

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 247 FKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPI--NSVISPTYEEVIKGEGMPI 304
           FKRDG+DLV   +I L+ A+ G    L  + G  L V I    VI+P   +VI+G+GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61
Query: 305 PKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
           PK     GNL IKF IKFP    T +++ LK+L
Sbjct: 62  PKY-GGYGNLIIKFTIKFPENHFTSEEN-LKKL 92

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPD--KNPNNKKDAEAKFKQISEAYDVLSDPQ 61
           DYYKIL V RNAK++++ KAYRKLA++WHPD  +N   KK AE KF  I+ A +VLSDP+
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 62  KRAVYD 67
            R  +D
Sbjct: 443 XRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPD--KNPNNKKDAEAKFKQISEAYDVLSDPQ 61
           DYYKIL V RNAK++++ KAYRKLA++WHPD  +N   KK AE KF  I+ A +VLSDP+
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 62  KRAVYD 67
            R  +D
Sbjct: 443 MRKKFD 448

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY I+ V      + +K AYR+LA K+HPD +   + DAEA+FK+++EA++VLSD Q+R
Sbjct: 6  DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVS--KEPDAEARFKEVAEAWEVLSDEQRR 63
Query: 64 AVYDQ 68
          A YDQ
Sbjct: 64 AEYDQ 68

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 6  YKILQVDRNA-KEEDLKKAYRKLAMKWHPD--KNPNNKKDAEAKFKQISEAYDVLSDPQK 62
          Y +L+V+R    ++ L KAYR LA K HPD  KN   K  AE +F+ I+ AY+ L D + 
Sbjct: 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 63 RAVYDQY 69
          +  YD Y
Sbjct: 78 KTNYDYY 84

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY +L  D  +  E +   ++  A++ HPDK+P N K  E  F+++ +A ++L++ + R
Sbjct: 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVET-FQKLQKAKEILTNEESR 79
Query: 64 AVYDQY 69
          A YD +
Sbjct: 80 ARYDHW 85

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLS 58
          D+Y IL  D +A   DLK+ Y+KL + +HPDK   +      ++   KF +I +A+ +L 
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 59 DPQKRAVYD 67
          + + +  YD
Sbjct: 77 NEETKKKYD 85

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLS 58
          D+Y IL  D +A   DLK+ Y+KL + +HPDK   +      ++   KF +I +A+ +L 
Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 59 DPQKRAVYD-QYGEEGLK 75
          + + +  YD Q  E+ L+
Sbjct: 71 NEETKREYDLQRCEDDLR 88

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 6  YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAV 65
          Y +L V   A +  +K AY +    +HPD+N  + + AE +F +IS+AY VL     R  
Sbjct: 20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAE-RFTRISQAYVVLGSATLRRK 78
Query: 66 YDQ--YGEEGLKG 76
          YD+    +E L+G
Sbjct: 79 YDRGLLSDEDLRG 91

>pdb|1IUR|A Chain A, Dnaj Domain Of Human Kiaa0730 Protein Length = 88

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 17 EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG 73
          E + KK  R+L +KWHPDKNP N   A   FK +    + L   +K+A  DQ  +  
Sbjct: 30 ESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQAFLDQNADRA 83

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	339
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	1e-95
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	3e-94
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	8e-90
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	1e-77
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	4e-54
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	9e-51
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	1e-48
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	2e-48
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	4e-45
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	5e-45
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	1e-44
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	4e-06
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-44
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	2e-43
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-42
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	3e-41
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	1e-40
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	2e-40
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	5e-40
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	6e-40
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	7e-40
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	8e-40
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	2e-39
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	6e-39
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	2e-38
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-38
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	7e-35
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	3e-32
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	8e-30
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	2e-28
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	5e-26
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-21
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	3e-21
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	5e-19
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-17
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	4e-17
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	1e-16
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	5e-13
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	2e-12
2guz_A	71	Mitochondrial import inner membrane translocase su	1e-11
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	3e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  280 bits (718), Expect = 1e-95
 Identities = 83/177 (46%), Positives = 124/177 (70%), Gaps = 1/177 (0%)

Query: 164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEE-ILTIEIKPGWKKGTKITFPE 222
           P+   L  SLE++Y G TKKMKIS   ++  G+    E+ ILTIE+K GWK+GTKITFP+
Sbjct: 4   PVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPK 63

Query: 223 KGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLT 282
           +G++  N IP+D++F++ +KPH++FKRDG+D++   +ISL EAL G TV + TLDGRT+ 
Sbjct: 64  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 123

Query: 283 VPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRLIP 339
           V    VI P     + GEG+P+PK P KRG+L I+F + FP ++    ++ L++++P
Sbjct: 124 VVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 180

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  276 bits (709), Expect = 3e-94
 Identities = 72/175 (41%), Positives = 104/175 (59%), Gaps = 2/175 (1%)

Query: 164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEK 223
             E  L  +LE+LY G  KK+K++R       +    E I+ +EIKPGWK GTK+T+  +
Sbjct: 5   SHEVPLLVTLEELYLGKRKKIKVTRKRFI-EHKVRNEENIVEVEIKPGWKDGTKLTYSGE 63

Query: 224 GN-ELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLT 282
           G+ E     P DL+ II  K H  F RD   L++   I LV ALTG+T  +TTLD R L 
Sbjct: 64  GDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQ 123

Query: 283 VPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
           +PI  +++P   +++  EGMPI  +P ++G+L ++F+I FP  LT EQK  +K  
Sbjct: 124 IPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEA 178

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  265 bits (679), Expect = 8e-90
 Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 5/172 (2%)

Query: 164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEK 223
            ++  LP SLEDL+ G  K  KI R     +      +  + I++KPGWK GTKIT+  +
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASE----KTQIDIQLKPGWKAGTKITYKNQ 57

Query: 224 GNE-LRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLT 282
           G+   +      L F+I EK H  FKRDG+DL+ T  +S  E+L G++  + T+DGRTL 
Sbjct: 58  GDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLP 117

Query: 283 VPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGL 334
           +     + P+      G+GMP PK PS+RGNL +K+ + +P  L   QK  +
Sbjct: 118 LSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  240 bits (614), Expect = 1e-77
 Identities = 88/338 (26%), Positives = 134/338 (39%), Gaps = 57/338 (16%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY IL V      + +K AYR+LA K+HPD +     DAEAKFK ++EA++VL D Q+R
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKDEQRR 86

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
           A YDQ  +         PG          +     F       +DIFS  FG        
Sbjct: 87  AEYDQLWQHR-----NDPGFGRQRQTHEQSYSQQDF-------DDIFSSMFG-------- 126

Query: 124 GGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTLPCSLEDLYKGTTKK 183
             +            G D+                          +   LE+     T+ 
Sbjct: 127 QQAHQRRRQHAAR--GHDLEI-----------------------EVAVFLEETLAEQTRT 161

Query: 184 MKISRDVIDASGRPNTTE-EILTIEIKPGWKKGTKITFPEKGNELRNVIPS-DLIFIIDE 241
           +  +  V +  G   +   + L ++I  G   G +I    +G    N  P+ DL  +I  
Sbjct: 162 ISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHI 221

Query: 242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGR-TLTVPINSVISPTYEEV-IKG 299
            PH LF   G++L +   ++  EA  G  V + TL     LTVP     S   + + IKG
Sbjct: 222 APHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPG---SQAGQRLRIKG 278

Query: 300 EGMPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
           +G+      +  G+L     I  P+K   + +   ++L
Sbjct: 279 KGLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQQL 313

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  171 bits (436), Expect = 4e-54
 Identities = 48/91 (52%), Positives = 64/91 (70%)

Query: 3  VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
            YY+IL V R+A  +D+KKAYR+ A++WHPDKNP+NK+ AE KFK+++EAY+VLSD  K
Sbjct: 2  ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 63 RAVYDQYGEEGLKGQMPPPGASGFPGAGAGA 93
          R +YD+YG EGL G    P  +     G G 
Sbjct: 62 REIYDRYGREGLTGTGTGPSRAEAGSGGPGL 92

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  162 bits (413), Expect = 9e-51
 Identities = 44/83 (53%), Positives = 62/83 (74%)

Query: 3  VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
           +YY++L V  +A  ED+KKAYRKLA++WHPDKNP+NK++AE KFK +SEAY+VLSD +K
Sbjct: 9  ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68

Query: 63 RAVYDQYGEEGLKGQMPPPGASG 85
          R++YD+ G +  +      G S 
Sbjct: 69 RSLYDRAGCDSWRAGGGASGPSS 91

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  157 bits (398), Expect = 1e-48
 Identities = 46/74 (62%), Positives = 59/74 (79%)

Query: 3  VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
          VDYY++L V R A  E +KKAYRKLA+KWHPDKNP NK++AE +FKQ++EAY+VLSD +K
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68

Query: 63 RAVYDQYGEEGLKG 76
          R +YD+YG     G
Sbjct: 69 RDIYDRYGSGPSSG 82

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  156 bits (396), Expect = 2e-48
 Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 2/77 (2%)

Query: 1  MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
          MG DYY+ L + R A +E++K+AYR+ A+++HPDKN      AE KFK+I+EAYDVLSDP
Sbjct: 1  MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDP 58

Query: 61 QKRAVYDQYGEEGLKGQ 77
          +KR ++D+YGEEGLKG 
Sbjct: 59 RKREIFDRYGEEGLKGS 75

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  149 bits (377), Expect = 4e-45
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 1   MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
            G   Y +L +D+NA  +D+KK+YRKLA+K+HPDKNP+N  +A  KFK+I+ A+ +L+D 
Sbjct: 15  SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDA 73

Query: 61  QKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGG 95
            KR +YD+YG  GL         +      +G   
Sbjct: 74  TKRNIYDKYGSLGLYVAEQFGEENVNTYFVSGPSS 108

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  147 bits (374), Expect = 5e-45
 Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 4/88 (4%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
            Y +L V  +A E++LKK YRK A+K+HPDK   + +    KFK+ISEA+++L+DPQKR
Sbjct: 9  KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE----KFKEISEAFEILNDPQKR 64

Query: 64 AVYDQYGEEGLKGQMPPPGASGFPGAGA 91
           +YDQYG E  +   P  G  G  GAG 
Sbjct: 65 EIYDQYGLEAARSGGPSFGPGGPGGAGG 92

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  152 bits (386), Expect = 1e-44
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 3/137 (2%)

Query: 201 EEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKI 260
            +IL + ++PG K G +I F  + ++  +VIP D++FI+ E+PH  FKRDG+DLV   +I
Sbjct: 111 RKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEI 170

Query: 261 SLVEALTGYTVQLTTLDGRTL--TVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKF 318
            L+ A+ G    L  + G  L   +    VI+P   +VI+G+GMPIPK     GNL IKF
Sbjct: 171 DLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGY-GNLIIKF 229

Query: 319 NIKFPSKLTTEQKSGLK 335
            IK P    T +++  K
Sbjct: 230 TIKDPENHFTSEENLKK 246

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 152 GEGSANALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVI 191
           G       ++   I+  +  SLE+LYKG T K+ +++ ++
Sbjct: 1   GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQIL 40

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  150 bits (381), Expect = 2e-44
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 12/123 (9%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           ++Y +L V + A   ++++A++KLA+K HPDKNPNN  +A   F +I+ AY+VL D   R
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLR 61

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDM 123
             YD+YGE+GL+              G      + +R++    +D           F   
Sbjct: 62  KKYDKYGEKGLEDNQ-----------GGQYESWSYYRYDFGIYDDDPEIITLERREFDAA 110

Query: 124 GGS 126
             S
Sbjct: 111 VNS 113

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  146 bits (369), Expect = 2e-43
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLS 58
           D+Y IL  D +A   DLK+ Y+KL + +HPDK   +      ++   KF +I +A+ +L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 59  DPQKRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTR 104
           + + +  YD    E     + P  A  +    +   G  SF  + R
Sbjct: 71  NEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCR 116

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  142 bits (360), Expect = 1e-42
 Identities = 52/112 (46%), Positives = 69/112 (61%), Gaps = 17/112 (15%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY+IL V + A+E +++KAY++LAMK+HPD+N  + K+AEAKFK+I EAY+VL+D QKR
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKR 62

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFG 115
           A YDQYG    +              G G GG   F        DIF + FG
Sbjct: 63  AAYDQYGHAAFEQGG---------MGGGGFGGGADF-------SDIFGDVFG 98

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  137 bits (348), Expect = 3e-41
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          +   +++      E + KK  R+L +KWHPDKNP N   A   FK +    + L   +K+
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 64 AVYDQYGEEGLKGQ 77
          A  DQ  +   +  
Sbjct: 74 AFLDQNADRASRRT 87

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  136 bits (344), Expect = 1e-40
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)

Query: 1  MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
          +  D Y++L V R A + D+KKAY+KLA +WHPDKN +    AE +F QIS+AY++LS+ 
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNE 72

Query: 61 QKRAVYDQYGEEGLKG 76
          +KR  YD YG     G
Sbjct: 73 EKRTNYDHYGSGPSSG 88

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  135 bits (343), Expect = 2e-40
 Identities = 40/69 (57%), Positives = 52/69 (75%), Gaps = 4/69 (5%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           YY +L V  +A + +LKKAYRK+A+K+HPDKNP    D   +FKQIS+AY+VLSD +KR
Sbjct: 9  GYYDVLGVKPDASDNELKKAYRKMALKFHPDKNP----DGAEQFKQISQAYEVLSDEKKR 64

Query: 64 AVYDQYGEE 72
           +YDQ GEE
Sbjct: 65 QIYDQGGEE 73

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  134 bits (340), Expect = 5e-40
 Identities = 41/73 (56%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V R A +EDLKKAYR+LA+K+HPDKN      A   FK I  AY VLS+P+KR
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKR 65

Query: 64 AVYDQYGEEGLKG 76
            YDQ+G     G
Sbjct: 66 KQYDQFGSGPSSG 78

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  134 bits (340), Expect = 6e-40
 Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           YY IL V ++A E  +KKA+ KLAMK+HPDKN +   DAEAKF++I+EAY+ LSD  +R
Sbjct: 8  SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRR 65

Query: 64 AVYDQYGEEGLKGQMPPPGASG 85
            YD  G           G S 
Sbjct: 66 KEYDTLGHSAFTSGKGQSGPSS 87

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  135 bits (341), Expect = 7e-40
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           DYY +L  D  +  E +   ++  A++ HPDK+P N K A   F+++ +A ++L++ + R
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPK-AVETFQKLQKAKEILTNEESR 79

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGG 95
           A YD +    +   MP         +   +G 
Sbjct: 80  ARYDHWRRSQM--SMPFQQWEALNDSVKTSGP 109

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  134 bits (339), Expect = 8e-40
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V RNA ++++KKAY +LA K+HPD N ++   A+ KF Q++EAY+VLSD  KR
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKR 66

Query: 64 AVYDQYGEEGLKG 76
            YD YG     G
Sbjct: 67 KQYDAYGSGPSSG 79

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  133 bits (337), Expect = 2e-39
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
            Y +L V   A +  +K AY +    +HPD+N  +  +A  +F +IS+AY VL     R
Sbjct: 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLR 76

Query: 64 AVYDQYGEEGLKGQMPPPGASGFPG 88
            YD+         +  PG+    G
Sbjct: 77 RKYDRGLLSDE--DLRGPGSGPSSG 99

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score =  133 bits (337), Expect = 6e-39
 Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 5/97 (5%)

Query: 247 FKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPI--NSVISPTYEEVIKGEGMPI 304
           FKRDG+DLV   +I L+ A+ G    L  + G  L V I    VI+P   +VI+G+GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 305 PKEPSKRGNLRIKFNIKFPSKLTT--EQKSGLKRLIP 339
           PK     GNL IKF IKFP    T  E    L+ ++P
Sbjct: 62  PKYG-GYGNLIIKFTIKFPENHFTSEENLKKLEEILP 97

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  131 bits (331), Expect = 2e-38
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLS 58
          D+Y IL  D +A   DLK+ Y+KL + +HPDK   +      ++   KF +I +A+ +L 
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76

Query: 59 DPQKRAVYDQYGEEGLKG 76
          + + +  YD        G
Sbjct: 77 NEETKKKYDLQRSGPSSG 94

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  131 bits (332), Expect = 2e-38
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 4  DYYKILQVDRNAK-EEDLKKAYRKLAMKWHPDKNPNNK--KDAEAKFKQISEAYDVLSDP 60
          + Y +L+V+R    ++ L KAYR LA K HPD+  N +    AE +F+ I+ AY+ L D 
Sbjct: 16 NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD 75

Query: 61 QKRAVYDQYGEEG 73
          + +  YD Y +  
Sbjct: 76 EAKTNYDYYLDHP 88

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  122 bits (308), Expect = 7e-35
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 18/118 (15%)

Query: 4   DYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
               +L ++R+A      ++KAY K   ++HPDK  +     E K K+++  Y  + D  
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGV 63

Query: 62  KRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSP 119
           K A    +G      ++P  G   +              +N  N E++F      SS 
Sbjct: 64  KYAHQPDFGGFWDATEIPTYGTDEW-----------EQWWNAFNEENLFCSEEMPSSD 110

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  117 bits (295), Expect = 3e-32
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 4  DYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
              +L ++R+A      ++KAY K   ++HPDK  +     E K K+++  Y  + D  
Sbjct: 12 QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGV 66

Query: 62 KRAVYDQYGEEGLKGQM 78
          K A    +G      ++
Sbjct: 67 KYAHQPDFGGFWDATEV 83

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  108 bits (271), Expect = 8e-30
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          D + +L V   A  +++ KAYRKLA+  HPDK       +E  FK +  A   L    K 
Sbjct: 28 DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKS 85

Query: 64 AVYD 67
              
Sbjct: 86 GPSS 89

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score =  113 bits (285), Expect = 2e-28
 Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 2/67 (2%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDK--NPNNKKDAEAKFKQISEAYDVLSDPQ 61
           DYYKIL V RNAK++++ KAYRKLA++WHPD   N   KK AE KF  I+ A +VLSDP+
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442

Query: 62  KRAVYDQ 68
            R  +D 
Sbjct: 443 MRKKFDD 449

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  107 bits (269), Expect = 5e-26
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 1/117 (0%)

Query: 4   DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
           ++Y +L V + A   ++++A++KLA+K HPDKNPNN   A   F +I+ AY+VL D   R
Sbjct: 22  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPN-AHGDFLKINRAYEVLKDEDLR 80

Query: 64  AVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPF 120
             YD+YGE+GL+        S                  T    +  +        F
Sbjct: 81  KKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWF 137

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 88.5 bits (219), Expect = 2e-21
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 3  VDYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDV 56
          +DY+ +  +    +   + L   ++ L  ++HPDK  +     +  A  +   I++A+  
Sbjct: 1  MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60

Query: 57 LSDPQKRAVYD 67
          L  P  RA Y 
Sbjct: 61 LRHPLMRAEYL 71

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 82.3 bits (203), Expect = 5e-19
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 11/78 (14%)

Query: 4  DYYKILQVDRNAK-------EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDV 56
           +Y++       K       +  L+K YR+L  + HPD           +   +++AY  
Sbjct: 12 TFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHT 67

Query: 57 LSDPQKRAVYDQYGEEGL 74
          L DP +R+ Y       +
Sbjct: 68 LKDPLRRSQYMLKLLRNI 85

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 78.7 bits (193), Expect = 1e-17
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 2   GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN--NKKDAEAKFKQISEAYDVLSD 59
           G   +K + +      E +KK YRK  +  HPDK      ++ A+  F ++++A+    +
Sbjct: 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175

Query: 60  PQKRAVY 66
             ++ +Y
Sbjct: 176 QGQKPLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 77.8 bits (191), Expect = 4e-17
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 6/70 (8%)

Query: 4   DYYKILQVDR--NAKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVL 57
           DY+ ++  +R        L+  Y++L    HPD         K  +E     +++AY  L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 58  SDPQKRAVYD 67
             P  R +Y 
Sbjct: 104 LAPLSRGLYL 113

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 72.7 bits (178), Expect = 1e-16
 Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 4  DYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
             ++L++ R        +++AY++ ++  HPDK  +      A  ++++  +       
Sbjct: 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEV 66

Query: 62 KRAVYDQYG 70
               +  G
Sbjct: 67 YNLRMNLGG 75

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 63.7 bits (156), Expect = 5e-13
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 243 PHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGR-TLTVPINSVISPTYEEVIKGEG 301
            H LF   G++L +   ++  EA  G  V + TL     LTVP  S         IKG+G
Sbjct: 3   AHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLR--IKGKG 60

Query: 302 MPIPKEPSKRGNLRIKFNIKFPSKLTTEQKSGLKRL 337
           +      +  G+L     I  P+K   + +   ++L
Sbjct: 61  LV---SKTHTGDLFAVIKIVMPTKPDEKARELWQQL 93

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 61.9 bits (150), Expect = 2e-12
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 6  YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN--NKKDAEAKFKQISEAYDVLSD 59
          +K + +      E +KK YRK  +  HP K      ++ A+  F ++++A+    +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 58.5 bits (142), Expect = 1e-11
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 4  DYYKILQVDRNAK-EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQK 62
          +  +IL +  N   ++ LK+ +RK+ +  HPDK  +          +I+EA D L     
Sbjct: 15 EALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGI 69

Query: 63 R 63
           
Sbjct: 70 S 70

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 58.5 bits (141), Expect = 3e-11
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 6/59 (10%)

Query: 6   YKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPN------NKKDAEAKFKQISEAYDVLS 58
           +K + +    +   ++K+Y++  +  HPDK          K  AE  F+ + EA+D  +
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 56/346 (16%), Positives = 88/346 (25%), Gaps = 98/346 (28%)

Query: 17  EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVL-SDPQ---KRAVY--DQYG 70
           EE L+  Y+ L            ++      +   E  D L +D Q   K  V     Y 
Sbjct: 84  EEVLRINYKFLMSPIK-----TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL 138

Query: 71  E--EGLKGQMPPPGAS--GFPGAG----AGA-----GGPTSFRF--------NTRNPEDI 109
           +  + L    P       G  G+G    A              F        N  +PE +
Sbjct: 139 KLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198

Query: 110 FSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKAAPIERTL 169
                           SR+  S   +      I A   R          L K+ P E  L
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRI-HSIQAELRR----------LLKSKPYENCL 247

Query: 170 PCSLEDLY-KGTTKKMKI-------SRD--VIDASGRPNTTEEILTIEIKPGWKKGTKIT 219
              L ++          +       +R   V D      TT  I                
Sbjct: 248 -LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS-AATTTHISLDHHSMT-------- 297

Query: 220 F-PEKGNEL----RNVIPSDLIFIIDEKPHSLFKRDGNDLVVTQKISLVEAL-------- 266
             P++   L     +  P DL       P  +     N       +S++           
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDL-------PREV--LTTNPRR----LSIIAESIRDGLATW 344

Query: 267 TGY-TVQLTTLDGRTLTVPINSVISPT-----YEE-VIKGEGMPIP 305
             +  V    L    +   +N V+ P      ++   +      IP
Sbjct: 345 DNWKHVNCDKLT-TIIESSLN-VLEPAEYRKMFDRLSVFPPSAHIP 388

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	339
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.93
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.92
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.9
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.89
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.87
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.86
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.86
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.86
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.86
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.86
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.85
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.85
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.84
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.84
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.83
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.83
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.81
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.78
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.78
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.76
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.75
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.74
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.73
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.72
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.71
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.69
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.68
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.68
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.67
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.67
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.65
2guz_A	71	Mitochondrial import inner membrane translocase su	99.62
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.61
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.6
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.38
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.3
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	99.09
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	99.08
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.06
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	99.06
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.02
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.93
2guz_B	65	Mitochondrial import inner membrane translocase su	98.82
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	91.64

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=1e-67  Score=497.38  Aligned_cols=284  Identities=27%  Similarity=0.405  Sum_probs=162.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCCCCCCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQMPPPG   82 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (339)
                      +|||++|||+++||.+|||+|||+||++||||+|++  ..|+++|++|++||++|+||.+|+.||+|+......+     
T Consensus        28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~-----  100 (329)
T 3lz8_A           28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPG-----  100 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC--hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCC-----
Confidence            799999999999999999999999999999999986  3788999999999999999999999999964321111     


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCccccCC
Q 019573           83 ASGFPGAGAGAGGPTSFRFNTRNPEDIFSEFFGFSSPFGDMGGSRASASGFPRGMFGDDIFASFNRGSAGEGSANALRKA  162 (339)
Q Consensus        83 ~~~~~~~~~f~~~~~~~~f~~~~~~d~f~~~fg~~~~f~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  162 (339)
                      .++  ++..+++     .|...++.|+|++|||+.    +.       .+                      +...++++
T Consensus       101 ~~~--~~~~~~~-----~f~~~~f~diF~~~Fg~~----g~-------~~----------------------~~~~~~~g  140 (329)
T 3lz8_A          101 FGR--QRQTHEQ-----SYSQQDFDDIFSSMFGQQ----AH-------QR----------------------RRQHAARG  140 (329)
T ss_dssp             ----------------------------------------------------------------------------CCCC
T ss_pred             ccc--ccccccC-----CcCCCchhhhhHhhhcCc----CC-------CC----------------------CCCCcCCC
Confidence            000  0000000     111125678899998731    00       00                      00124578


Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeee-eeEEEEEeCCCCcCCCEEEecCCCcCCC-CCCCccEEEEEe
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTT-EEILTIEIKPGWKKGTKITFPEKGNELR-NVIPSDLIFIID  240 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~  240 (339)
                      .|+.++|.|||+|+|.|++++|.+.+.+||+.|++..+ .++++|+||||+++|++|+|+|+|++.+ ++.+|||||+|+
T Consensus       141 ~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~  220 (329)
T 3lz8_A          141 HDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIH  220 (329)
T ss_dssp             CCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEEC
T ss_pred             CCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEE
Confidence            99999999999999999999999999999999975443 6789999999999999999999999984 567999999999


Q ss_pred             ecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEE
Q 019573          241 EKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI  320 (339)
Q Consensus       241 v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v  320 (339)
                      |+||+.|+|+|+||+++++|+|+||++|++++|+|+||+ ++|+||+++++|+++||+|+|||..   +.+|||||+|+|
T Consensus       221 v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V  296 (329)
T 3lz8_A          221 IAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKI  296 (329)
T ss_dssp             CCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEE
T ss_pred             EecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEE
Confidence            999999999999999999999999999999999999997 7999999999999999999999964   468999999999


Q ss_pred             ECCCCCCHHHHHHHHhh
Q 019573          321 KFPSKLTTEQKSGLKRL  337 (339)
Q Consensus       321 ~~P~~l~~~~~~~l~~~  337 (339)
                      .+|+.|+++|+++|+++
T Consensus       297 ~~P~~l~~~q~~~l~~~  313 (329)
T 3lz8_A          297 VMPTKPDEKARELWQQL  313 (329)
T ss_dssp             CCCSSCCHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHHHHH
Confidence            99999999999999886

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.3e-47  Score=327.37  Aligned_cols=177  Identities=40%  Similarity=0.727  Sum_probs=167.2

Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcC-CCCCCCccEEEEEe
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNE-LRNVIPSDLIFIID  240 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDL~v~i~  240 (339)
                      +.|+.++|.|||+|||+|+++++.+.+.+.|++| .+.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|+
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~   81 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQ   81 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEE
Confidence            6799999999999999999999999999988876 578889999999999999999999999999 58889999999999


Q ss_pred             ecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEE
Q 019573          241 EKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNI  320 (339)
Q Consensus       241 v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v  320 (339)
                      +++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.++|++|+++++|+++||+|+|||..++++.+|||||+|+|
T Consensus        82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V  161 (180)
T 2q2g_A           82 TKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDI  161 (180)
T ss_dssp             ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEE
T ss_pred             EEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence            99999999999999999999999999999999999999889999999999999999999999976545678999999999


Q ss_pred             ECCCCCCHHHHHHHHhhCC
Q 019573          321 KFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       321 ~~P~~l~~~~~~~l~~~lp  339 (339)
                      .||++||++|+++|+++||
T Consensus       162 ~~P~~Ls~~q~~~l~~~~p  180 (180)
T 2q2g_A          162 CFPKSLTPEQKKLIKEALD  180 (180)
T ss_dssp             ECCSCCCHHHHHHHHHHC-
T ss_pred             ECCCCCCHHHHHHHHHhcC
Confidence            9999999999999999997

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=2.4e-46  Score=324.26  Aligned_cols=177  Identities=46%  Similarity=0.884  Sum_probs=162.7

Q ss_pred             CCCeEEEEeeChhhheeCceEEEEEEEEEE--cCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEE
Q 019573          162 AAPIERTLPCSLEDLYKGTTKKMKISRDVI--DASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFII  239 (339)
Q Consensus       162 ~~d~~~~l~itl~e~~~G~~~~i~~~~~~~--~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i  239 (339)
                      +.|+.++|.|||+|||+|+++++.+.+.+.  .|.| .+.+.++++|+||+||++|++|+|+|+|++.+++.+|||||+|
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g-~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i   80 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS-IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVL   80 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSC-EEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCce-EEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEE
Confidence            358899999999999999999999987654  4455 5778899999999999999999999999999888999999999


Q ss_pred             eecCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEE
Q 019573          240 DEKPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFN  319 (339)
Q Consensus       240 ~v~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~  319 (339)
                      ++++|+.|+|+|+||+++++|||+||++|+++.|+|+||++++|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus        81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~  160 (181)
T 3agx_A           81 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFE  160 (181)
T ss_dssp             EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEE
T ss_pred             EEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence            99999999999999999999999999999999999999988999999999999999999999997654567899999999


Q ss_pred             EECCCCCCHHHHHHHHhhCC
Q 019573          320 IKFPSKLTTEQKSGLKRLIP  339 (339)
Q Consensus       320 v~~P~~l~~~~~~~l~~~lp  339 (339)
                      |.+|+.||++|+++|+++||
T Consensus       161 V~~P~~ls~~q~~~l~~~~~  180 (181)
T 3agx_A          161 VIFPERIPQTSRTVLEQVLP  180 (181)
T ss_dssp             EECCSCCCHHHHHHHHHHSC
T ss_pred             EECCCCCCHHHHHHHHHhcc
Confidence            99999999999999999987

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=3.3e-44  Score=307.91  Aligned_cols=169  Identities=40%  Similarity=0.732  Sum_probs=157.0

Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCC-CCCCCccEEEEEee
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNEL-RNVIPSDLIFIIDE  241 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~v  241 (339)
                      .|+.++|.|||+|||+|+++++.+.+.  +++|+.  +.++++|+||||+++|++|+|+|+|++. +++.+|||||+|++
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~--~~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v   76 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--GPHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE   76 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE--ETTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEe--cCCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence            378999999999999999999999887  356743  7889999999999999999999999965 77889999999999


Q ss_pred             cCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEE
Q 019573          242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK  321 (339)
Q Consensus       242 ~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~  321 (339)
                      ++|+.|+|+|+||+++++|||+||++|+++.|+|+||++++|++|+++++|+++||+|+|||..++++.+|||||+|+|.
T Consensus        77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~  156 (170)
T 1c3g_A           77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD  156 (170)
T ss_dssp             CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred             ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence            99999999999999999999999999999999999998899999999999999999999999765456789999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 019573          322 FPSKLTTEQKSGLK  335 (339)
Q Consensus       322 ~P~~l~~~~~~~l~  335 (339)
                      +|++||++|+++|+
T Consensus       157 ~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A          157 YPISLNDAQKRAID  170 (170)
T ss_dssp             CCSSCCTTHHHHTC
T ss_pred             CCCCCCHHHHHhhC
Confidence            99999999999874

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=9.7e-43  Score=316.00  Aligned_cols=176  Identities=38%  Similarity=0.672  Sum_probs=150.2

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEc----CC----------------Cc----------------------
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVID----AS----------------GR----------------------  196 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~----g~----------------G~----------------------  196 (339)
                      ++++.|+.++|.|||+|||+|++++|.+.+.+.|    |+                |.                      
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~   87 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCH   87 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCS
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCC
Confidence            4678999999999999999999999999876532    11                11                      


Q ss_pred             -------------------eeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEEEeecCCCCcccCCCceEEE
Q 019573          197 -------------------PNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFIIDEKPHSLFKRDGNDLVVT  257 (339)
Q Consensus       197 -------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~v~~h~~f~r~g~DL~~~  257 (339)
                                         .+.+.++++|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++
T Consensus        88 G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~  167 (248)
T 1nlt_A           88 GTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYE  167 (248)
T ss_dssp             SSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEE
T ss_pred             CcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEE
Confidence                               2456789999999999999999999999999888999999999999999999999999999


Q ss_pred             EeecHHHHhcCcEEEEecCCCcEEEEEeCCc--cCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCC--CCHHHHHH
Q 019573          258 QKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSK--LTTEQKSG  333 (339)
Q Consensus       258 l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~--l~~~~~~~  333 (339)
                      ++|||+|||+|+++.|+||||+.++|+||++  +++|+++||+|+|||...++ .+|||||+|+|+||+.  ||++|+++
T Consensus       168 ~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          168 AEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             EEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC-----------
T ss_pred             EEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHHh
Confidence            9999999999999999999998899999988  99999999999999976533 6899999999999999  99999998


Q ss_pred             HH
Q 019573          334 LK  335 (339)
Q Consensus       334 l~  335 (339)
                      |+
T Consensus       247 l~  248 (248)
T 1nlt_A          247 LE  248 (248)
T ss_dssp             --
T ss_pred             hC
Confidence            75

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.93  E-value=4.9e-26  Score=180.41  Aligned_cols=93  Identities=24%  Similarity=0.340  Sum_probs=86.9

Q ss_pred             cCCCCcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEE
Q 019573          242 KPHSLFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIK  321 (339)
Q Consensus       242 ~~h~~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~  321 (339)
                      +||+.|+|+|+||+++++|||+||++|+++.|+|+|| .++|+||+++++|+++||+|+|||. .  +.+|||||+|+|.
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG-~~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~   77 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE-SILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV   77 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSS-CEEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCC-CEEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence            6899999999999999999999999999999999999 5999999999999999999999996 3  3799999999999


Q ss_pred             CCCCCCHHHHHHHHhhC
Q 019573          322 FPSKLTTEQKSGLKRLI  338 (339)
Q Consensus       322 ~P~~l~~~~~~~l~~~l  338 (339)
                      +|+.|+++|+++|++++
T Consensus        78 ~P~~Ls~~q~~~l~~l~   94 (109)
T 3i38_A           78 MPTKPDEKARELWQQLA   94 (109)
T ss_dssp             CCSSCCHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHH
Confidence            99999999999999874

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.92  E-value=5e-25  Score=178.03  Aligned_cols=93  Identities=44%  Similarity=0.700  Sum_probs=84.3

Q ss_pred             CcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCc--cCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECC
Q 019573          246 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP  323 (339)
Q Consensus       246 ~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P  323 (339)
                      .|+|+|+||+++++|+|+||++|+++.|+|+||++++|+||++  +++|+++||+|+|||..+++ .+|||||+|+|.+|
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4899999999999999999999999999999998899999988  99999999999999976533 68999999999999


Q ss_pred             CC--CCHHHHHHHHhhCC
Q 019573          324 SK--LTTEQKSGLKRLIP  339 (339)
Q Consensus       324 ~~--l~~~~~~~l~~~lp  339 (339)
                      +.  |+++|+++|++++|
T Consensus        80 ~~~~ls~~q~~~l~~l~~   97 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILP   97 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHcc
Confidence            99  99999999999986

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.90  E-value=2.6e-24  Score=169.18  Aligned_cols=75  Identities=56%  Similarity=0.985  Sum_probs=69.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      |..|||+||||+++|+.++||+|||+|+++||||+++.. +.++++|++|++||++|+||.+|+.||++|++++..
T Consensus         1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   75 (103)
T 1bq0_A            1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ   75 (103)
T ss_dssp             CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence            778999999999999999999999999999999999854 468899999999999999999999999999987753

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.89  E-value=1.2e-23  Score=156.63  Aligned_cols=74  Identities=61%  Similarity=1.106  Sum_probs=69.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      |+.|||+||||+++|+.++||+|||+|+++||||+++.  ..+.+.|+.|++||++|+||.+|+.||++|.+++.+
T Consensus         1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   74 (77)
T 1hdj_A            1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence            88999999999999999999999999999999999976  368899999999999999999999999999887653

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=8.1e-23  Score=154.00  Aligned_cols=72  Identities=63%  Similarity=1.102  Sum_probs=67.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL   74 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (339)
                      .|||+||||+++|+.++||+|||+|+++||||+++...+.+.++|++|++||++|+||.+|+.||++|..+.
T Consensus         9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   80 (82)
T 2ej7_A            9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS   80 (82)
T ss_dssp             CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred             cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            699999999999999999999999999999999987766889999999999999999999999999997654

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.86  E-value=9.9e-23  Score=158.72  Aligned_cols=74  Identities=61%  Similarity=1.106  Sum_probs=67.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      .|||+||||+++|+.+|||+|||+|+++||||+++...+.+.+.|++|++||++|+||.+|+.||.+|.+++.+
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            79999999999999999999999999999999998766678999999999999999999999999999877653

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1.2e-22  Score=156.37  Aligned_cols=72  Identities=50%  Similarity=0.883  Sum_probs=66.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQ   77 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+    .++|++|++||++|+||.+|+.||++|.+++..+
T Consensus         7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~   78 (92)
T 2o37_A            7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG   78 (92)
T ss_dssp             CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence            46899999999999999999999999999999999764    3699999999999999999999999999887643

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=2.1e-22  Score=155.03  Aligned_cols=74  Identities=57%  Similarity=1.020  Sum_probs=69.2

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      .|||+||||+++|+.++||+|||+|+++||||+++...+.++++|++|++||++|+||.+|+.||++|.+++..
T Consensus         9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (92)
T 2dmx_A            9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA   82 (92)
T ss_dssp             CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred             cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            68999999999999999999999999999999998765688999999999999999999999999999877653

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=1.9e-22  Score=150.86  Aligned_cols=71  Identities=52%  Similarity=0.855  Sum_probs=66.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG   73 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|++|++||++|+||.+|+.||++|..+
T Consensus         6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            47899999999999999999999999999999999865 468899999999999999999999999998754

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=2.5e-22  Score=153.27  Aligned_cols=73  Identities=51%  Similarity=0.853  Sum_probs=68.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.  +.+.++|++|++||++|+||.+|+.||.+|.+++.+
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   78 (88)
T 2ctr_A            6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS   78 (88)
T ss_dssp             CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence            4799999999999999999999999999999999985  578899999999999999999999999999887764

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=6.2e-22  Score=147.69  Aligned_cols=70  Identities=57%  Similarity=0.920  Sum_probs=65.5

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG   73 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.  ..+.+.|++|++||++|+||.+|+.||++|.++
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            3689999999999999999999999999999999975  478899999999999999999999999998754

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.85  E-value=6.2e-22  Score=151.12  Aligned_cols=70  Identities=51%  Similarity=0.901  Sum_probs=65.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG   73 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.  ..+.++|++|++||++|+||.+|+.||++|...
T Consensus        16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999999986  368899999999999999999999999998743

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.84  E-value=1.7e-21  Score=143.46  Aligned_cols=67  Identities=58%  Similarity=0.997  Sum_probs=61.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEE   72 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||++++.    .+.|++|++||++|+||.+|+.||++|++
T Consensus         7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            36899999999999999999999999999999999753    47899999999999999999999999863

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=2.3e-21  Score=151.24  Aligned_cols=68  Identities=32%  Similarity=0.551  Sum_probs=63.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG   70 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||++.
T Consensus        16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l   83 (99)
T 2yua_A           16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRGL   83 (99)
T ss_dssp             SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred             ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence            46899999999999999999999999999999999765 478899999999999999999999999843

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.83  E-value=2e-21  Score=154.12  Aligned_cols=73  Identities=52%  Similarity=0.948  Sum_probs=67.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK   75 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||++|..++.
T Consensus        16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            47899999999999999999999999999999999865 57889999999999999999999999999986653

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=1.2e-21  Score=156.22  Aligned_cols=72  Identities=29%  Similarity=0.592  Sum_probs=67.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL   74 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||+++..++
T Consensus        19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~   90 (112)
T 2ctq_A           19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQM   90 (112)
T ss_dssp             CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence            37999999999999999999999999999999999865 4688999999999999999999999999998664

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.81  E-value=1.2e-20  Score=145.68  Aligned_cols=70  Identities=33%  Similarity=0.614  Sum_probs=64.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+     ...+.++|++|++||++|+||.+|+.||.+..
T Consensus        15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            36999999999999999999999999999999998742     25788999999999999999999999999764

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.78  E-value=8.3e-20  Score=161.08  Aligned_cols=72  Identities=46%  Similarity=0.893  Sum_probs=67.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLK   75 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (339)
                      +|||+||||+++|+.+|||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|..++.
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~   73 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE   73 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence            6999999999999999999999999999999999765 47889999999999999999999999999987765

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.78  E-value=5e-20  Score=146.17  Aligned_cols=70  Identities=40%  Similarity=0.658  Sum_probs=64.5

Q ss_pred             CCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            2 GVDYYKILQVDRNA-KEEDLKKAYRKLAMKWHPDKNPN--NKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         2 ~~d~y~iLgv~~~a-~~~eIk~ayr~l~~~~hPd~~~~--~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      ..|||+||||+++| +.+|||+|||+|+++||||+++.  ..+.+.+.|++|++||++|+||.+|+.||+++.
T Consensus        14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            47999999999999 99999999999999999999864  235788999999999999999999999999885

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=2.8e-19  Score=136.86  Aligned_cols=62  Identities=34%  Similarity=0.477  Sum_probs=57.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhh
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAV   65 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~   65 (339)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.  ..+.++|++|++||++|+||.+|+.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC--TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCcccccC
Confidence            4799999999999999999999999999999999976  3688999999999999999999874

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.75  E-value=6.6e-19  Score=148.46  Aligned_cols=70  Identities=33%  Similarity=0.600  Sum_probs=63.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNK-----KDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      ..|||+||||+++|+.++||+|||+|+++||||+++...     +.|.++|+.|++||++|+||.+|+.||..+.
T Consensus         9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            468999999999999999999999999999999987642     2578999999999999999999999998764

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.74  E-value=4.3e-19  Score=134.78  Aligned_cols=62  Identities=29%  Similarity=0.478  Sum_probs=57.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhh
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA   64 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~   64 (339)
                      .++|+||||+++|+.+|||+|||+||++||||+++++.+.++++|++|++||++|+|...|.
T Consensus        16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~   77 (88)
T 1iur_A           16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD   77 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence            57899999999999999999999999999999999876678999999999999999987774

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.73  E-value=2.2e-19  Score=142.88  Aligned_cols=64  Identities=30%  Similarity=0.492  Sum_probs=60.1

Q ss_pred             CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            3 VDYYKILQVDRNAKE--EDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~--~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      .+||+||||+++|+.  ++||+|||+||++||||++++     .++|++|++||++|+||.+|+.||.+|.
T Consensus         8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            579999999999999  999999999999999999975     3689999999999999999999999875

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.72  E-value=1.4e-18  Score=129.49  Aligned_cols=64  Identities=16%  Similarity=0.322  Sum_probs=57.5

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcc
Q 019573            3 VDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEE   72 (339)
Q Consensus         3 ~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (339)
                      .++|+||||+++  |+.++||+|||+||++||||++.+     .++|++|++||++|+|+.+|.. +.||..
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~   76 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGT   76 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence            468999999999  999999999999999999999854     3789999999999999999988 557654

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.71  E-value=5.3e-19  Score=150.19  Aligned_cols=64  Identities=28%  Similarity=0.468  Sum_probs=57.4

Q ss_pred             CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            3 VDYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         3 ~d~y~iLgv~~~a~--~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      .|||+||||+++|+  .+|||+|||++|+++|||++++.     ++|++|++||++|+||.+|+.||++|.
T Consensus        11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~-----e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-----EKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC-----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH-----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            57999999999998  69999999999999999999753     689999999999999999999999996

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.68  E-value=1.1e-17  Score=142.82  Aligned_cols=67  Identities=24%  Similarity=0.391  Sum_probs=61.3

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573            4 DYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNK----KDAEAKFKQISEAYDVLSDPQKRAVYDQYG   70 (339)
Q Consensus         4 d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (339)
                      |||+||||++++  +.++||+|||+|+++||||++++..    ..|.++|+.|++||++|+||.+|+.||...
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            899999999999  9999999999999999999987642    246789999999999999999999999864

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.68  E-value=1e-17  Score=143.15  Aligned_cols=64  Identities=23%  Similarity=0.412  Sum_probs=58.9

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHHHHHHhhcCCchhhhhh
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKK--DAEAKFKQISEAYDVLSDPQKRAVY   66 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~--~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (339)
                      .|||++|||+++|+.++||+|||+|+++||||+++....  .|+++|++|++||++|+||.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            589999999999999999999999999999999876422  3889999999999999999999987

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.67  E-value=9.2e-18  Score=127.88  Aligned_cols=57  Identities=23%  Similarity=0.362  Sum_probs=51.6

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCC
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNK--KDAEAKFKQISEAYDVLSD   59 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d   59 (339)
                      .++|++|||++.||.+|||+|||++|++||||+|+++.  ..|+++|++|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999998652  2488999999999999974

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.67  E-value=2.3e-17  Score=144.90  Aligned_cols=67  Identities=25%  Similarity=0.454  Sum_probs=60.2

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            2 GVDYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         2 ~~d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      ..|||+||||+++  ++.++||+|||+|+++||||++++.    +..|.++|+.|++||++|+||.+|+.||.
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            3689999999986  7999999999999999999998754    22467899999999999999999999996

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.65  E-value=2.3e-17  Score=129.66  Aligned_cols=59  Identities=25%  Similarity=0.415  Sum_probs=52.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHhhcCCch
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN------KKDAEAKFKQISEAYDVLSDPQ   61 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~L~d~~   61 (339)
                      +.|||+||+++. ||.++||+|||++|++||||+|++.      ...|+++|++|++||++|+|+.
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            469999999996 9999999999999999999998631      1257899999999999999985

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.62  E-value=8.5e-17  Score=117.40  Aligned_cols=57  Identities=26%  Similarity=0.340  Sum_probs=51.0

Q ss_pred             CCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhh
Q 019573            3 VDYYKILQVDR-NAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRA   64 (339)
Q Consensus         3 ~d~y~iLgv~~-~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~   64 (339)
                      .++|+||||++ +|+.+|||+|||+|+++||||++.+     .+.|++|++||++|+++..|+
T Consensus        14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhcC
Confidence            47899999999 7999999999999999999999743     369999999999999987663

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.61  E-value=1e-16  Score=137.92  Aligned_cols=64  Identities=25%  Similarity=0.515  Sum_probs=58.4

Q ss_pred             CCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573            3 VDYYKIL------QVDR-NAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG   70 (339)
Q Consensus         3 ~d~y~iL------gv~~-~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (339)
                      .|||+||      |+++ +|+.++||+|||+|+++||||++++    +.++|+.|++||++|+||.+|+.||...
T Consensus        11 ~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A           11 STFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             CCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            7999999      4665 8999999999999999999999975    5578999999999999999999999843

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.60  E-value=6e-17  Score=168.93  Aligned_cols=74  Identities=45%  Similarity=0.870  Sum_probs=40.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      +.|||+||||+++||.+|||+|||+||++||||+++.+ +.+.++|++|++||++|+||.+|+.||+||++++..
T Consensus        20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~   93 (780)
T 3apo_A           20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED   93 (780)
T ss_dssp             ---CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence            57999999999999999999999999999999999755 478899999999999999999999999999887754

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.38  E-value=3e-13  Score=106.72  Aligned_cols=81  Identities=15%  Similarity=0.167  Sum_probs=69.4

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI  238 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~  238 (339)
                      .|.+.|++++++|||.||+.|++++|...      +|       .++|.||+|+++|++++++|+|++..+ .+|||||+
T Consensus         8 ~R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~   73 (109)
T 3i38_A            8 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAV   73 (109)
T ss_dssp             EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEE
T ss_pred             EEECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEE
Confidence            46789999999999999999999888765      45       479999999999999999999999854 78999999


Q ss_pred             EeecCCCCcccCCCc
Q 019573          239 IDEKPHSLFKRDGND  253 (339)
Q Consensus       239 i~v~~h~~f~r~g~D  253 (339)
                      |+|.-+..++.+...
T Consensus        74 ~~V~~P~~Ls~~q~~   88 (109)
T 3i38_A           74 IKIVMPTKPDEKARE   88 (109)
T ss_dssp             EEECCCSSCCHHHHH
T ss_pred             EEEECCCCCCHHHHH
Confidence            999977766654433

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.30  E-value=1.5e-12  Score=104.78  Aligned_cols=82  Identities=18%  Similarity=0.161  Sum_probs=66.8

Q ss_pred             cCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCCC-CCccEE
Q 019573          160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNV-IPSDLI  236 (339)
Q Consensus       160 ~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDL~  236 (339)
                      |++.|+++++.|||.+|+.|+++.|...      +|+      .++|+||+|  +++|++++++|+|++..++ .+||||
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~   71 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI   71 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC------CCC------EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence            5789999999999999999999888765      663      689999999  9999999999999997443 689999


Q ss_pred             EEEeecCCCC--cccCCCc
Q 019573          237 FIIDEKPHSL--FKRDGND  253 (339)
Q Consensus       237 v~i~v~~h~~--f~r~g~D  253 (339)
                      |++.|.-+..  ++.+..+
T Consensus        72 V~~~V~~P~~~~ls~~q~~   90 (121)
T 1xao_A           72 IKFTIKFPENHFTSEENLK   90 (121)
T ss_dssp             EEEEEECCCTTCSCHHHHH
T ss_pred             EEEEEECCCCCCCCHHHHH
Confidence            9999997665  5554433

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=99.09  E-value=8.5e-11  Score=100.08  Aligned_cols=81  Identities=19%  Similarity=0.217  Sum_probs=69.4

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC--CCCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDL~  236 (339)
                      .|.+.|++++++|||.||++|+++.|...      +|+      .++|.||+|+++|++++++|+|++..+  +.+||||
T Consensus        83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG~------~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~  150 (170)
T 1c3g_A           83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DGR------TLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI  150 (170)
T ss_dssp             EEETTEEEEEECCBHHHHHHCEEEEEECS------SSC------EEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred             EEeCCcEeEEEEcCHHHHhCCCeEEeeCC------CCC------EEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEE
Confidence            56799999999999999999999888766      563      588999999999999999999999743  3579999


Q ss_pred             EEEeecCCCCcccCC
Q 019573          237 FIIDEKPHSLFKRDG  251 (339)
Q Consensus       237 v~i~v~~h~~f~r~g  251 (339)
                      |+++|.-+..++.+.
T Consensus       151 V~~~V~~P~~Ls~~q  165 (170)
T 1c3g_A          151 VKYKVDYPISLNDAQ  165 (170)
T ss_dssp             EEECCBCCSSCCTTH
T ss_pred             EEEEEECCCCCCHHH
Confidence            999999776666544

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=99.08  E-value=9.5e-11  Score=100.80  Aligned_cols=81  Identities=19%  Similarity=0.206  Sum_probs=69.3

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC--CCCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDL~  236 (339)
                      .|.+.|++++++|||.||+.|+++.|...      +|+      .++|.||+|+++|++++++|+|++..+  +.+||||
T Consensus        89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~  156 (181)
T 3agx_A           89 KRDGSDVIYPARISLREALCGCTVNVPTL------DGR------TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLI  156 (181)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEE
T ss_pred             eeeCCcEEEEEEcCHHHHhCCCEEEeECC------CCC------EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEE
Confidence            56799999999999999999999888765      663      688999999999999999999999743  4579999


Q ss_pred             EEEeecCCCCcccCC
Q 019573          237 FIIDEKPHSLFKRDG  251 (339)
Q Consensus       237 v~i~v~~h~~f~r~g  251 (339)
                      |+++|.-+..++.+.
T Consensus       157 V~~~V~~P~~ls~~q  171 (181)
T 3agx_A          157 IEFEVIFPERIPQTS  171 (181)
T ss_dssp             EEEEEECCSCCCHHH
T ss_pred             EEEEEECCCCCCHHH
Confidence            999999776665443

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.06  E-value=8.2e-11  Score=112.45  Aligned_cols=66  Identities=56%  Similarity=0.922  Sum_probs=56.9

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNK--KDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      .++|.+||+.+.++.++|+++|+++++++|||+.+...  +.+.++|++|++||++|+||.+|..||.
T Consensus       382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            58999999999999999999999999999999987643  4688999999999999999999999996

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=99.06  E-value=1.3e-10  Score=99.80  Aligned_cols=81  Identities=21%  Similarity=0.180  Sum_probs=69.0

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC--CCCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN--VIPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~~~GDL~  236 (339)
                      .|.+.|++++++|||.||++|+++.|...      +|+      .++|.||+|+++|++++++|+|++..+  +.+||||
T Consensus        89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~  156 (180)
T 2q2g_A           89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL------DNR------NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLI  156 (180)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCEEEEEECT------TCC------EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEE
T ss_pred             EEcCCEEEEEEEcCHHHHhCCCEEEeeCC------CCC------EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEE
Confidence            46799999999999999999999888766      663      689999999999999999999999743  4579999


Q ss_pred             EEEeecCCCCcccCC
Q 019573          237 FIIDEKPHSLFKRDG  251 (339)
Q Consensus       237 v~i~v~~h~~f~r~g  251 (339)
                      |+++|.-+..++.+.
T Consensus       157 V~~~V~~P~~Ls~~q  171 (180)
T 2q2g_A          157 LEFDICFPKSLTPEQ  171 (180)
T ss_dssp             EEEEEECCSCCCHHH
T ss_pred             EEEEEECCCCCCHHH
Confidence            999999766555443

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.02  E-value=2.5e-10  Score=103.01  Aligned_cols=85  Identities=18%  Similarity=0.142  Sum_probs=66.7

Q ss_pred             cccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCCC-CCcc
Q 019573          158 ALRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRNV-IPSD  234 (339)
Q Consensus       158 ~~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GD  234 (339)
                      -.|.+.||+++++|||.||++|++++|...      +|+      .++|.||+|  +++|++++|+|+|++..+. ..||
T Consensus       157 F~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GD  224 (248)
T 1nlt_A          157 FKRDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGN  224 (248)
T ss_dssp             CEEETTEEEEEEEEEHHHHHHCBCCEEECS------SSC------EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCC
T ss_pred             ceeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CCC------EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCC
Confidence            357899999999999999999999888776      563      589999999  9999999999999997433 6799


Q ss_pred             EEEEEeecCCCC--cccCCCce
Q 019573          235 LIFIIDEKPHSL--FKRDGNDL  254 (339)
Q Consensus       235 L~v~i~v~~h~~--f~r~g~DL  254 (339)
                      |||+|+|.-+..  ++.+...+
T Consensus       225 L~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          225 LIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             EEEEEEEECCC-----------
T ss_pred             EEEEEEEECCCCCCCCHHHHHh
Confidence            999999996665  66555443

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.93  E-value=5.6e-10  Score=104.57  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=69.1

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI  238 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~  238 (339)
                      .|.+.||+++++|||.||++|++++|+..      +|+       ++|+||+|+++|++++|+|+|++.. ..+|||||+
T Consensus       228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL------dG~-------v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~  293 (329)
T 3lz8_A          228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KES-------ILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAV  293 (329)
T ss_dssp             EEETTEEEEEEEECHHHHHHCEEEEECCS------SSC-------EEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEE
T ss_pred             EEcCCcEEEEEECCHHHHcCCCeEEEECC------CCC-------EEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEE
Confidence            57899999999999999999999888776      562       6899999999999999999999976 468999999


Q ss_pred             EeecCCCCcccCCC
Q 019573          239 IDEKPHSLFKRDGN  252 (339)
Q Consensus       239 i~v~~h~~f~r~g~  252 (339)
                      |.|.-+...+.+..
T Consensus       294 ~~V~~P~~l~~~q~  307 (329)
T 3lz8_A          294 IKIVMPTKPDEKAR  307 (329)
T ss_dssp             EEECCCSSCCHHHH
T ss_pred             EEEECCCCCCHHHH
Confidence            99997666654443

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.82  E-value=2.2e-09  Score=76.10  Aligned_cols=51  Identities=14%  Similarity=0.107  Sum_probs=44.8

Q ss_pred             cccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCc
Q 019573            5 YYKILQVDRN---AKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP   60 (339)
Q Consensus         5 ~y~iLgv~~~---a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~   60 (339)
                      -|.||||+++   ++.++|++|||+|....|||+..+     .....+|++|++.|...
T Consensus         6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence            4789999999   999999999999999999999743     36778999999998643

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.64  E-value=0.0098  Score=45.67  Aligned_cols=30  Identities=10%  Similarity=0.079  Sum_probs=25.8

Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEc
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVID  192 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~  192 (339)
                      .|+.++|.|||+|||+|.+++|.+.+.+.|
T Consensus         2 ~~~~~~l~vslee~~~G~~~~i~~~~~~~C   31 (104)
T 2ctt_A            2 SSGSSGMELTFNQAAKGVNKEFTVNIMDTC   31 (104)
T ss_dssp             CCCCCCCCCCCSSCCSSSCTTCCSSCCEEC
T ss_pred             CceEEEEEEEHHHHcCCCEEEEEeeeeeEC
Confidence            467788999999999999999998877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	339
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	5e-27
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	9e-26
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	3e-25
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	4e-23
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	4e-22
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	8e-22
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	2e-20
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-20
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	3e-20
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	8e-20
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	3e-18
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	3e-13

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  100 bits (249), Expect = 5e-27
 Identities = 36/88 (40%), Positives = 54/88 (61%)

Query: 247 FKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPK 306
           FKRDG+DL+ T  +S  E+L G++  + T+DGRTL +     + P+      G+GMP PK
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61

Query: 307 EPSKRGNLRIKFNIKFPSKLTTEQKSGL 334
            PS+RGNL +K+ + +P  L   QK  +
Sbjct: 62  NPSQRGNLIVKYKVDYPISLNDAQKRAI 89

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 96.2 bits (239), Expect = 9e-26
 Identities = 41/72 (56%), Positives = 57/72 (79%), Gaps = 1/72 (1%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          DYY+IL V + A+E +++KAY++LAMK+HPD+N  +K+  EAKFK+I EAY+VL+D QKR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEA-EAKFKEIKEAYEVLTDSQKR 62

Query: 64 AVYDQYGEEGLK 75
          A YDQYG    +
Sbjct: 63 AAYDQYGHAAFE 74

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.8 bits (235), Expect = 3e-25
 Identities = 45/76 (59%), Positives = 61/76 (80%), Gaps = 2/76 (2%)

Query: 1  MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60
          MG DYY+ L + R A +E++K+AYR+ A+++HPDKN      AE KFK+I+EAYDVLSDP
Sbjct: 1  MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDP 58

Query: 61 QKRAVYDQYGEEGLKG 76
          +KR ++D+YGEEGLKG
Sbjct: 59 RKREIFDRYGEEGLKG 74

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 4e-23
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 4  DYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKR 63
          +   +++      E + KK  R+L +KWHPDKNP N   A   FK +    + L    K+
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQ 73

Query: 64 AVYDQYGEEGLK 75
          A  DQ  +   +
Sbjct: 74 AFLDQNADRASR 85

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.0 bits (215), Expect = 4e-22
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 1  MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYD 55
          +  D+Y IL  D +A   DLK+ Y+KL + +HPDK   +      ++   KF +I +A+ 
Sbjct: 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWK 73

Query: 56 VLSDPQKRAVYDQYG 70
          +L + + +  YD   
Sbjct: 74 ILGNEETKKKYDLQR 88

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 86.8 bits (214), Expect = 8e-22
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 4   DYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
               +L ++R+A      ++KAY K   ++HPDK  + +K      K+++  Y  + D  
Sbjct: 9   QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEK-----MKKMNTLYKKMEDGV 63

Query: 62  KRAVYDQYGEEGLKGQMPPPGASGFPGAGAGAGGPTSFRFNTRNPEDIFS--EFFGFSSP 119
           K A    +G      ++P  G   +              +N  N E++F   E       
Sbjct: 64  KYAHQPDFGGFWDATEIPTYGTDEW-----------EQWWNAFNEENLFCSEEMPSSDDE 112

Query: 120 F 120
            
Sbjct: 113 A 113

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 81.6 bits (201), Expect = 2e-20
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 4  DYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVL 57
          DY+ +  +        + L   ++ L  ++HPDK  +     +  A  +   I++A+  L
Sbjct: 2  DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 58 SDPQKRAVYD 67
            P  RA Y 
Sbjct: 62 RHPLMRAEYL 71

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 82.3 bits (203), Expect = 2e-20
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 2  GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN--KKDAEAKFKQISEAYDVLSD 59
          G   +K + +      E +KK YRK  +  HPDK      ++ A+  F ++++A+    +
Sbjct: 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 60 PQKRAVY 66
            ++ +Y
Sbjct: 92 QGQKPLY 98

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.5 bits (201), Expect = 3e-20
 Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 3/79 (3%)

Query: 247 FKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTL--TVPINSVISPTYEEVIKGEGMPI 304
           FKRDG+DLV   +I L+ A+ G    L  + G  L   +    VI+P   +VI+G+GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 305 PKEPSKRGNLRIKFNIKFP 323
           PK     GNL IKF IK P
Sbjct: 62  PKYG-GYGNLIIKFTIKDP 79

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.3 bits (198), Expect = 8e-20
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 164 PIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEK 223
            ++  LP SLEDL+ G  K  KI R     +      +  + I++KPGWK GTKIT+  +
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASE----KTQIDIQLKPGWKAGTKITYKNQ 57

Query: 224 GNE-LRNVIPSDLIFIIDEKPH 244
           G+   +      L F+I EK H
Sbjct: 58  GDYNPQTGRRKTLQFVIQEKSH 79

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 76.2 bits (187), Expect = 3e-18
 Identities = 9/69 (13%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 4  DYYKILQVDRNAK--EEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQ 61
             ++L++ R        +++AY++ ++  HPDK  ++        ++++  +       
Sbjct: 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHAL-----MQELNSLWGTFKTEV 66

Query: 62 KRAVYDQYG 70
               +  G
Sbjct: 67 YNLRMNLGG 75

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.0 bits (150), Expect = 3e-13
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 13/85 (15%)

Query: 160 RKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKIT 219
           ++   I+  +  SLE+LYKG T K+                 +IL + ++PG K G +I 
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKL-------------ALNRKILEVHVEPGMKDGQRIV 48

Query: 220 FPEKGNELRNVIPSDLIFIIDEKPH 244
           F  + ++  +VIP D++FI+ E+PH
Sbjct: 49  FKGEADQAPDVIPGDVVFIVSERPH 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	339
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.92
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.91
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.85
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.84
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.81
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.79
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.78
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.72
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.72
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.72
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.66
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.51
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.34
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.21
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.1

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=4e-26  Score=173.15  Aligned_cols=90  Identities=40%  Similarity=0.754  Sum_probs=85.8

Q ss_pred             CcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECCCC
Q 019573          246 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFPSK  325 (339)
Q Consensus       246 ~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P~~  325 (339)
                      .|+|+|+||+++++||++||++|+++.|+|+||++++|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            48999999999999999999999999999999999999999999999999999999998776778999999999999999


Q ss_pred             CCHHHHHHHH
Q 019573          326 LTTEQKSGLK  335 (339)
Q Consensus       326 l~~~~~~~l~  335 (339)
                      ||++|+++|+
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999874

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4e-25  Score=161.67  Aligned_cols=72  Identities=58%  Similarity=1.029  Sum_probs=67.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcccc
Q 019573            2 GVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGL   74 (339)
Q Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (339)
                      .+|||+||||+++||.+|||+|||+++++||||+++.+ +.+.+.|+.|++||+||+||.+|+.||+||..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~-~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTT-CHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCC-hHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            37999999999999999999999999999999999865 4778899999999999999999999999998664

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.9e-25  Score=162.12  Aligned_cols=74  Identities=61%  Similarity=1.104  Sum_probs=69.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccccCC
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKG   76 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (339)
                      |.+|||+||||+++||.++|++||+++++++|||+++..  .+.++|+.|++||+||+||.+|+.||++|++++++
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~--~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g   74 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccch--hHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcC
Confidence            899999999999999999999999999999999999763  67889999999999999999999999999988753

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=1.2e-21  Score=144.94  Aligned_cols=78  Identities=47%  Similarity=0.703  Sum_probs=72.7

Q ss_pred             CcccCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCc--cCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECC
Q 019573          246 LFKRDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSV--ISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP  323 (339)
Q Consensus       246 ~f~r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P  323 (339)
                      .|+|+|+||+++++|+++||++|+++.|+|+||+.++|+|+++  +++|+++||+|+|||..+ .+.+|||||+|+|.+|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK-YGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSS-SCSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCC-cCCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999999899888765  999999999999999876 5679999999999999


Q ss_pred             C
Q 019573          324 S  324 (339)
Q Consensus       324 ~  324 (339)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=3.4e-22  Score=152.13  Aligned_cols=71  Identities=32%  Similarity=0.619  Sum_probs=64.4

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHhhcCCchhhhhhcccCc
Q 019573            1 MGVDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN-----KKDAEAKFKQISEAYDVLSDPQKRAVYDQYGE   71 (339)
Q Consensus         1 ~~~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (339)
                      |.+|||+||||+++|+.+|||+||++|+++||||+++..     ...++++|+.|++||+||+||.+|+.||....
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~   89 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence            458999999999999999999999999999999998754     24688899999999999999999999998653

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.81  E-value=1.2e-21  Score=154.76  Aligned_cols=66  Identities=27%  Similarity=0.436  Sum_probs=60.8

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCccc
Q 019573            3 VDYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEG   73 (339)
Q Consensus         3 ~d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (339)
                      .|||+||||+++|  +.++||+|||+||++||||++++.     ++|++|++||+||+||.+|+.||.++...
T Consensus         8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~-----e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-----EKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT-----TTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH-----HHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            5899999999999  788999999999999999999863     57999999999999999999999988644

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=2.8e-19  Score=129.88  Aligned_cols=74  Identities=36%  Similarity=0.785  Sum_probs=69.0

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCCCCCccEEEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRNVIPSDLIFI  238 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~  238 (339)
                      ++++.|++++|+|||+|||+|+++++.+.             .+.++|+||+|+++|++|+|+|+|++.+++.+|||+|+
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~-------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~~~GDl~v~   67 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALN-------------RKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFI   67 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEE-------------EEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEE
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeec-------------CccEEEEecccccCCeEEEecCCcCCCCCCCCCCEEEE
Confidence            46789999999999999999999999876             35799999999999999999999999998889999999


Q ss_pred             EeecCCC
Q 019573          239 IDEKPHS  245 (339)
Q Consensus       239 i~v~~h~  245 (339)
                      |+++||+
T Consensus        68 i~~~pHk   74 (74)
T d1nlta1          68 VSERPHK   74 (74)
T ss_dssp             EEECCCS
T ss_pred             EEecCCC
Confidence            9999995

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=2.7e-19  Score=132.09  Aligned_cols=79  Identities=38%  Similarity=0.656  Sum_probs=71.6

Q ss_pred             CCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCCC-CCCccEEEEEee
Q 019573          163 APIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELRN-VIPSDLIFIIDE  241 (339)
Q Consensus       163 ~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~v  241 (339)
                      +++.++|+|||||+|+|+++++++.|+.|++.+    +.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|++
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~----~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~   76 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGAS----EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE   76 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEE----EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCC----ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEe
Confidence            368999999999999999999999998876544    477899999999999999999999999865 578999999999


Q ss_pred             cCCC
Q 019573          242 KPHS  245 (339)
Q Consensus       242 ~~h~  245 (339)
                      ++||
T Consensus        77 ~~HP   80 (80)
T d1c3ga1          77 KSHP   80 (80)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9997

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8e-19  Score=131.06  Aligned_cols=67  Identities=33%  Similarity=0.554  Sum_probs=60.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccCcc
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEE   72 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (339)
                      +|+|+||+|+.+||.+|||+|||+|+++||||+|+++.+.|.++|+.|++||++|+   ++..||++...
T Consensus        16 ~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~~   82 (88)
T d1iura_          16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNADR   82 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSSC
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccchH
Confidence            58999999999999999999999999999999999887789999999999999996   56777776543

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.72  E-value=5.2e-19  Score=129.28  Aligned_cols=63  Identities=16%  Similarity=0.316  Sum_probs=57.5

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCchhhhhhcccC
Q 019573            3 VDYYKILQVDRNA--KEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYG   70 (339)
Q Consensus         3 ~d~y~iLgv~~~a--~~~eIk~ayr~l~~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (339)
                      .+||+||||++++  +.++||+|||+++++||||++.+     .++|++|++||++|+|+.+|..||.-+
T Consensus        11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~-----~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_          11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC-----HHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            4799999999988  99999999999999999999854     368999999999999999999999743

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.1e-18  Score=127.42  Aligned_cols=65  Identities=25%  Similarity=0.447  Sum_probs=57.6

Q ss_pred             CcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCCchhhhhhcc
Q 019573            4 DYYKILQVDRN--AKEEDLKKAYRKLAMKWHPDKNPNN----KKDAEAKFKQISEAYDVLSDPQKRAVYDQ   68 (339)
Q Consensus         4 d~y~iLgv~~~--a~~~eIk~ayr~l~~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (339)
                      |||++|||++.  ++.+|||+|||+++++||||+....    +..+.+.|+.|++||+||+||.+|+.|+.
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            89999999995  5599999999999999999997543    23577889999999999999999999974

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.66  E-value=1e-17  Score=127.86  Aligned_cols=64  Identities=23%  Similarity=0.440  Sum_probs=58.4

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHhhcCCchhhhhh
Q 019573            3 VDYYKILQVDRNAKEEDLKKAYRKLAMKWHPDKNPNN--KKDAEAKFKQISEAYDVLSDPQKRAVY   66 (339)
Q Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~l~~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (339)
                      .++|++||++..||.++||+|||+++++||||++++.  ...|.+.|+.|++||++|+||.+|+.|
T Consensus        33 ~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             ccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            4789999999999999999999999999999987654  345788999999999999999999987

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=2.6e-14  Score=103.15  Aligned_cols=72  Identities=22%  Similarity=0.241  Sum_probs=64.4

Q ss_pred             cCCCceEEEEeecHHHHhcCcEEEEecCCCcEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECC
Q 019573          249 RDGNDLVVTQKISLVEALTGYTVQLTTLDGRTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP  323 (339)
Q Consensus       249 r~g~DL~~~l~I~l~~al~G~~~~i~~~~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P  323 (339)
                      |++.|++++++|||+||++|+++.|.+. .++++|+||+++++|+++|++|+|.+..  ++.+|||+|++++.-+
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~-~~~~~i~Ip~G~~~G~~ir~~g~G~~~~--~~~~GDl~v~i~~~pH   73 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALN-RKILEVHVEPGMKDGQRIVFKGEADQAP--DVIPGDVVFIVSERPH   73 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEE-EEEEEEEECTTCCTTCEEEETTCSCCCT--TCBCCCEEEEEEECCC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeec-CccEEEEecccccCCeEEEecCCcCCCC--CCCCCCEEEEEEecCC
Confidence            5789999999999999999999999864 4589999999999999999999999864  3568999999998654

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.34  E-value=5.2e-13  Score=99.97  Aligned_cols=81  Identities=19%  Similarity=0.210  Sum_probs=69.2

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCCCcCCCEEEecCCCcCCC--CCCCccEE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPGWKKGTKITFPEKGNELR--NVIPSDLI  236 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~--~~~~GDL~  236 (339)
                      .|++.|++++++|||.||+.|++++|...      +|+      .++|+||+|+++|++++++|+|++..  .+..|||+
T Consensus         3 ~R~G~DL~~~~~I~~~eal~G~~~~i~~~------dG~------~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~   70 (90)
T d1c3ga2           3 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DGR------TLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI   70 (90)
T ss_dssp             EEETTEEEEEECCBHHHHHHCEEEEEECS------SSC------EEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred             eEeCCeEEEEEEeCHHHHhcCCeEEEecc------ccc------ceecccccccccccccccCCCCCCcCCCCCCcCCEE
Confidence            36789999999999999999999998765      563      78999999999999999999999863  34689999


Q ss_pred             EEEeecCCCCcccCC
Q 019573          237 FIIDEKPHSLFKRDG  251 (339)
Q Consensus       237 v~i~v~~h~~f~r~g  251 (339)
                      |+++|.-+..++.+.
T Consensus        71 V~~~v~~P~~ls~~q   85 (90)
T d1c3ga2          71 VKYKVDYPISLNDAQ   85 (90)
T ss_dssp             EEECCBCCSSCCTTH
T ss_pred             EEEEEEcCCCCCHHH
Confidence            999999666566543

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.21  E-value=8.7e-12  Score=91.04  Aligned_cols=73  Identities=21%  Similarity=0.198  Sum_probs=63.0

Q ss_pred             ccCCCCeEEEEeeChhhheeCceEEEEEEEEEEcCCCceeeeeeEEEEEeCCC--CcCCCEEEecCCCcCCCC-CCCccE
Q 019573          159 LRKAAPIERTLPCSLEDLYKGTTKKMKISRDVIDASGRPNTTEEILTIEIKPG--WKKGTKITFPEKGNELRN-VIPSDL  235 (339)
Q Consensus       159 ~~~~~d~~~~l~itl~e~~~G~~~~i~~~~~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~-~~~GDL  235 (339)
                      .|++.|++++++|||.||+.|+++.+...      +|+      .++|.||++  +++|++++++|+|++..+ +.+|||
T Consensus         3 ~R~G~dL~~~~~I~~~eal~G~~~~i~~~------dg~------~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL   70 (80)
T d1nlta2           3 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL   70 (80)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCBCCEEECS------SSC------EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred             EEeCCEEEEEEEeCHHHHhCCCEEEEEec------Ccc------eEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcE
Confidence            36789999999999999999999988765      553      678888877  999999999999998743 568999


Q ss_pred             EEEEeecC
Q 019573          236 IFIIDEKP  243 (339)
Q Consensus       236 ~v~i~v~~  243 (339)
                      +|+++|+-
T Consensus        71 ~v~~~V~~   78 (80)
T d1nlta2          71 IIKFTIKD   78 (80)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEEc
Confidence            99999973

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=1.3e-10  Score=84.71  Aligned_cols=71  Identities=15%  Similarity=0.214  Sum_probs=59.1

Q ss_pred             CceEEEEeecHHHHhcCcEEEEec----CCC----cEEEEEeCCccCCCcEEEEccCCCCCCCCCCCCCCEEEEEEEECC
Q 019573          252 NDLVVTQKISLVEALTGYTVQLTT----LDG----RTLTVPINSVISPTYEEVIKGEGMPIPKEPSKRGNLRIKFNIKFP  323 (339)
Q Consensus       252 ~DL~~~l~I~l~~al~G~~~~i~~----~~g----~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~Gdl~v~~~v~~P  323 (339)
                      +++.+.+.|||.||+.|+++.|..    .+|    +++.|.||+++.+|++++++|+|..... .+.+|||+|.|++.-+
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~~~i~~~~H   79 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEKSH   79 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSS-SSCBCEEEEEEEECCC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcC-CCCCCCEEEEEEeCCC
Confidence            478999999999999999776653    344    3689999999999999999999987544 4568999999998754