Citrus Sinensis ID: 019620


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLAQNKPKSKPP
ccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHcHHHHHHcHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
ccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHccHHHHHHHHHHHcccHHEHccccHHHHHHcHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHccccEEEccccccHccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccc
MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHegwgrlyggltpsivgtaasQGVYYYFYQIFRNNAEVAALEhkkrgigdgsvGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQThtktlkkskpcrseltsseksshatvepppfatshAIQEVYDeaglwgfwrgvfptlimvsnpsiQFMLYETMLKKIKERRAlrkkdnsgvTALEIFLLGALAKLGATIVTYPLLVVKARLQAkqvttgdkrhhykGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLaqnkpkskpp
MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQthtktlkkskpcrseltsseksshatvepppFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERralrkkdnsgVTALEIFLLGALAKLGATIVTYPLLVVKARLQakqvttgdkrhhykgTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFllaqnkpkskpp
MSDalinglagagggiiaqliTYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLAQNKPKSKPP
****LINGLAGAGGGIIAQLITYPLQTVNA*************KLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQT**********************************HAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLA*********
*SDALINGLAGAGGGIIAQLITYPLQTVNAR*****************AQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAA*************GMLSSLVVAALAGCVNVLLTNPIWVVVTRM***************************VEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKI****************LEIFLLGALAKLGATIVTYPLLVVKA******************TLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGA**************
MSDALINGLAGAGGGIIAQLITYPLQTVN**************KLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQ****************************PPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLAQ********
MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAAL*********GSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTK************************PPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLA*********
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MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVKGARFLLAQNKPKSKPP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
O04200331 Peroxisomal nicotinamide yes no 0.967 0.987 0.751 1e-135
Q76P23329 Mitochondrial substrate c yes no 0.822 0.844 0.350 1e-45
O43808307 Peroxisomal membrane prot yes no 0.813 0.895 0.305 2e-33
P21245423 Peroxisomal membrane prot N/A no 0.852 0.680 0.277 5e-32
Q00319419 Peroxisomal membrane prot N/A no 0.843 0.680 0.273 2e-31
Q7XA87308 Folate transporter 1, chl no no 0.843 0.925 0.299 3e-31
O70579307 Peroxisomal membrane prot yes no 0.813 0.895 0.299 8e-31
Q9H2D1315 Mitochondrial folate tran no no 0.840 0.901 0.288 5e-28
Q95J75315 Mitochondrial folate tran N/A no 0.840 0.901 0.273 7e-28
Q8BMG8316 Mitochondrial folate tran no no 0.825 0.882 0.277 1e-27
>sp|O04200|PXN_ARATH Peroxisomal nicotinamide adenine dinucleotide carrier OS=Arabidopsis thaliana GN=PXN PE=1 SV=1 Back     alignment and function desciption
 Score =  483 bits (1243), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/330 (75%), Positives = 280/330 (84%), Gaps = 3/330 (0%)

Query: 1   MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGW 60
           MSDALINGLAGAGGGIIAQL+TYPLQTVN RQQTERD+K+EKRKLGT+  MCQVVK EGW
Sbjct: 1   MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKREKRKLGTIEHMCQVVKQEGW 60

Query: 61  GRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAAL 120
            RLYGGL PS+ GTAASQGVYYYFYQ+FRN AE  AL  KK+G+GDGSVGM +SL+VAA 
Sbjct: 61  ERLYGGLAPSLAGTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAF 120

Query: 121 AGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQE 180
           AG VNVL+TNPIWV+VTRMQTH K + K +    E  SS   +   VEP P+ T + I+E
Sbjct: 121 AGSVNVLMTNPIWVIVTRMQTHRK-MTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIRE 179

Query: 181 VYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLL 240
           VYDEAG+ GFW+GV PTLIMVSNPS+QFMLYETML K+K++RAL+  +N  VTALE FLL
Sbjct: 180 VYDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNN--VTALETFLL 237

Query: 241 GALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMG 300
           GA+AKLGAT+ TYPLLVVK+RLQAKQVTTGDKR  YKGTLDAILKMIRYEG YGFY+GM 
Sbjct: 238 GAVAKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMS 297

Query: 301 TKIVQSVLAAAVLFMIKEELVKGARFLLAQ 330
           TKIVQSVLAAAVLFMIKEELVKGA+ LL+ 
Sbjct: 298 TKIVQSVLAAAVLFMIKEELVKGAKLLLSN 327




Mediates the NAD(+) import into peroxisomes. Favors the NAD(+)(in)/AMP(out) antiport exchange, but is also able to catalyze a low unidirectional transport that might be essential under special conditions. Transports CoA, dephospho-CoA, acetyl-CoA, adenosine 3',5'-diphosphate (PAP), NAD(+), AMP, ADP and NADH, but has no activity with ATP, GTP, GDP, NADPH, NADP(+) or FAD. Required for peroxisomes proliferation.
Arabidopsis thaliana (taxid: 3702)
>sp|Q76P23|PM34_DICDI Mitochondrial substrate carrier family protein Q OS=Dictyostelium discoideum GN=mcfQ PE=2 SV=1 Back     alignment and function description
>sp|O43808|PM34_HUMAN Peroxisomal membrane protein PMP34 OS=Homo sapiens GN=SLC25A17 PE=1 SV=1 Back     alignment and function description
>sp|P21245|PM47A_CANBO Peroxisomal membrane protein PMP47A OS=Candida boidinii GN=PMP47A PE=1 SV=1 Back     alignment and function description
>sp|Q00319|PM47B_CANBO Peroxisomal membrane protein PMP47B OS=Candida boidinii GN=PMP47B PE=2 SV=1 Back     alignment and function description
>sp|Q7XA87|FOLT1_ARATH Folate transporter 1, chloroplastic OS=Arabidopsis thaliana GN=FOLT1 PE=2 SV=1 Back     alignment and function description
>sp|O70579|PM34_MOUSE Peroxisomal membrane protein PMP34 OS=Mus musculus GN=Slc25a17 PE=2 SV=1 Back     alignment and function description
>sp|Q9H2D1|MFTC_HUMAN Mitochondrial folate transporter/carrier OS=Homo sapiens GN=SLC25A32 PE=1 SV=2 Back     alignment and function description
>sp|Q95J75|MFTC_MACFA Mitochondrial folate transporter/carrier OS=Macaca fascicularis GN=SLC25A32 PE=2 SV=1 Back     alignment and function description
>sp|Q8BMG8|MFTC_MOUSE Mitochondrial folate transporter/carrier OS=Mus musculus GN=Slc25a32 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
255571823338 peroxisomal membrane protein pmp34, puta 0.988 0.988 0.801 1e-148
449463038341 PREDICTED: mitochondrial substrate carri 0.991 0.982 0.795 1e-143
296086092337 unnamed protein product [Vitis vinifera] 0.976 0.979 0.790 1e-143
224109374340 predicted protein [Populus trichocarpa] 0.973 0.967 0.796 1e-143
359486715342 PREDICTED: mitochondrial substrate carri 0.976 0.964 0.790 1e-142
356568612338 PREDICTED: mitochondrial substrate carri 0.991 0.991 0.759 1e-139
224101103326 predicted protein [Populus trichocarpa] 0.961 0.996 0.773 1e-135
356539939338 PREDICTED: mitochondrial substrate carri 1.0 1.0 0.745 1e-134
297827609331 peroxisomal membrane protein [Arabidopsi 0.964 0.984 0.756 1e-134
357492569336 Peroxisomal membrane protein [Medicago t 0.985 0.991 0.745 1e-134
>gi|255571823|ref|XP_002526854.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] gi|223533753|gb|EEF35485.1| peroxisomal membrane protein pmp34, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 274/342 (80%), Positives = 304/342 (88%), Gaps = 8/342 (2%)

Query: 1   MSDALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGW 60
           MSDALINGLAGAGGGIIAQLITYPLQTVN RQQT+RD KKE+RKLGT+ QMCQVVK+EGW
Sbjct: 1   MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKEQRKLGTIEQMCQVVKNEGW 60

Query: 61  GRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAAL 120
            RLYGGLTPS+VGTAASQGVYYYFYQIFR+ AE  ALEHK++GIGDGSVGM SSLVVAAL
Sbjct: 61  ERLYGGLTPSLVGTAASQGVYYYFYQIFRDKAEAIALEHKRKGIGDGSVGMFSSLVVAAL 120

Query: 121 AGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSH-ATVEPPPFATSHAIQ 179
           AGCVNVLLTNPIWVVVTRMQTHTK  KK K     L+ +E  +    VEPPPF TSHAIQ
Sbjct: 121 AGCVNVLLTNPIWVVVTRMQTHTKASKKFK----TLSVAENDTFFDAVEPPPFRTSHAIQ 176

Query: 180 EVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFL 239
           EVYDE G++GFWRGV PTLIMVSNPSIQFMLYETMLKK+K++RALRK+ +  VTA+EIFL
Sbjct: 177 EVYDEGGVFGFWRGVLPTLIMVSNPSIQFMLYETMLKKLKKQRALRKRGDVAVTAVEIFL 236

Query: 240 LGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGM 299
           LGALAKLGAT+VTYPLLVVK+RLQAKQ+ TGDKRHHY+GTLDAILKMI YEGFYGFY+GM
Sbjct: 237 LGALAKLGATVVTYPLLVVKSRLQAKQLKTGDKRHHYEGTLDAILKMIHYEGFYGFYKGM 296

Query: 300 GTKIVQSVLAAAVLFMIKEELVKGARFLLAQ---NKPKSKPP 338
            TKIVQSVLAAAVLFM+KEELV+G RFLL +   N+ +S+PP
Sbjct: 297 NTKIVQSVLAAAVLFMVKEELVRGTRFLLTKASVNRTRSRPP 338




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463038|ref|XP_004149241.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Cucumis sativus] gi|449524168|ref|XP_004169095.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296086092|emb|CBI31533.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224109374|ref|XP_002315175.1| predicted protein [Populus trichocarpa] gi|222864215|gb|EEF01346.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359486715|ref|XP_002279488.2| PREDICTED: mitochondrial substrate carrier family protein Q [Vitis vinifera] Back     alignment and taxonomy information
>gi|356568612|ref|XP_003552504.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Glycine max] Back     alignment and taxonomy information
>gi|224101103|ref|XP_002312143.1| predicted protein [Populus trichocarpa] gi|222851963|gb|EEE89510.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356539939|ref|XP_003538450.1| PREDICTED: mitochondrial substrate carrier family protein Q-like [Glycine max] Back     alignment and taxonomy information
>gi|297827609|ref|XP_002881687.1| peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata] gi|297327526|gb|EFH57946.1| peroxisomal membrane protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357492569|ref|XP_003616573.1| Peroxisomal membrane protein [Medicago truncatula] gi|355517908|gb|AES99531.1| Peroxisomal membrane protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2061176331 PXN "peroxisomal NAD carrier" 0.964 0.984 0.702 4.7e-119
DICTYBASE|DDB_G0272346329 mcfQ "mitochondrial substrate 0.387 0.398 0.460 1.8e-46
FB|FBgn0052250314 CG32250 [Drosophila melanogast 0.585 0.630 0.321 6.4e-37
UNIPROTKB|Q2KJJ1307 SLC25A17 "Solute carrier famil 0.585 0.644 0.353 1.7e-36
MGI|MGI:1342248307 Slc25a17 "solute carrier famil 0.573 0.631 0.334 3.5e-36
ZFIN|ZDB-GENE-070620-4312 slc25a17 "solute carrier famil 0.582 0.631 0.299 1.9e-35
UNIPROTKB|E1BSN0335 SLC25A17 "Uncharacterized prot 0.541 0.546 0.342 2.4e-35
RGD|1311498307 Slc25a17 "solute carrier famil 0.573 0.631 0.326 2.4e-35
UNIPROTKB|O43808307 SLC25A17 "Peroxisomal membrane 0.538 0.592 0.350 3.1e-35
UNIPROTKB|F1PTI5307 SLC25A17 "Uncharacterized prot 0.573 0.631 0.330 5e-35
TAIR|locus:2061176 PXN "peroxisomal NAD carrier" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
 Identities = 231/329 (70%), Positives = 262/329 (79%)

Query:     1 MSDXXXXXXXXXXXXXXXXXXTYPLQTVNARQQTERDVKKEKRKLGTVAQMCQVVKHEGW 60
             MSD                  TYPLQTVN RQQTERD+K+EKRKLGT+  MCQVVK EGW
Sbjct:     1 MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKREKRKLGTIEHMCQVVKQEGW 60

Query:    61 GRLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAAL 120
              RLYGGL PS+ GTAASQGVYYYFYQ+FRN AE  AL  KK+G+GDGSVGM +SL+VAA 
Sbjct:    61 ERLYGGLAPSLAGTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAF 120

Query:   121 AGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQE 180
             AG VNVL+TNPIWV+VTRMQTH K + K +    E  SS   +   VEP P+ T + I+E
Sbjct:   121 AGSVNVLMTNPIWVIVTRMQTHRK-MTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIRE 179

Query:   181 VYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLL 240
             VYDEAG+ GFW+GV PTLIMVSNPS+QFMLYETML K+K++RAL+  +N  VTALE FLL
Sbjct:   180 VYDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNN--VTALETFLL 237

Query:   241 GALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMG 300
             GA+AKLGAT+ TYPLLVVK+RLQAKQVTTGDKR  YKGTLDAILKMIRYEG YGFY+GM 
Sbjct:   238 GAVAKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMS 297

Query:   301 TKIVQSVLAAAVLFMIKEELVKGARFLLA 329
             TKIVQSVLAAAVLFMIKEELVKGA+ LL+
Sbjct:   298 TKIVQSVLAAAVLFMIKEELVKGAKLLLS 326




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0005778 "peroxisomal membrane" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0005777 "peroxisome" evidence=IDA
GO:0043132 "NAD transport" evidence=IMP
GO:0044375 "regulation of peroxisome size" evidence=IMP
GO:0006635 "fatty acid beta-oxidation" evidence=RCA
DICTYBASE|DDB_G0272346 mcfQ "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0052250 CG32250 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KJJ1 SLC25A17 "Solute carrier family 25 (Mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1342248 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070620-4 slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BSN0 SLC25A17 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1311498 Slc25a17 "solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O43808 SLC25A17 "Peroxisomal membrane protein PMP34" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PTI5 SLC25A17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04200PXN_ARATHNo assigned EC number0.75150.96740.9879yesno
O43808PM34_HUMANNo assigned EC number0.30580.81360.8957yesno
Q76P23PM34_DICDINo assigned EC number0.35040.82240.8449yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00018287001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (337 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-18
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-12
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-11
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 2e-07
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-05
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.003
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 230 SGVTALEIFLLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRY 289
           S ++ L   L G +A   A  VTYPL VVK RLQ+       K   YKG LD   K+ + 
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQSSAAGGSRK---YKGILDCFKKIYKE 57

Query: 290 EGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVK 322
           EG  G Y+G+   +++   AAA+ F   E L K
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKK 90


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.96
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.96
KOG1519297 consensus Predicted mitochondrial carrier protein 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.94
KOG0769308 consensus Predicted mitochondrial carrier protein 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.93
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.93
KOG0766297 consensus Predicted mitochondrial carrier protein 99.92
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.92
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.92
KOG2745321 consensus Mitochondrial carrier protein [General f 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.7
KOG2745321 consensus Mitochondrial carrier protein [General f 99.64
KOG2954427 consensus Mitochondrial carrier protein [General f 99.64
KOG1519297 consensus Predicted mitochondrial carrier protein 99.59
KOG2954427 consensus Mitochondrial carrier protein [General f 98.43
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=3.2e-59  Score=388.04  Aligned_cols=290  Identities=31%  Similarity=0.539  Sum_probs=257.3

Q ss_pred             hHHHHHHHhHHHHHHHHhhchhHHHHHHHhcccccc-hhhccccHHHHHHHHHHhhhhhhhccCcchhHHHhhhhhhHHH
Q 019620            4 ALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVK-KEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGVYY   82 (338)
Q Consensus         4 ~~~~~~ag~~a~~~~~~~~~Pld~ik~r~Q~~~~~~-~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~l~~~~~~~~~~   82 (338)
                      -+.++++|..+|+++.+++||||.+|+|+|++.... ....|++..++++.|+|.||++|||||+.|.++++.++++++|
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF   84 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYF   84 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHH
Confidence            456789999999999999999999999999994432 2368999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCcchHHHHHHHHHHHHhHhHhcchHHHHHHHHhhcccccCCCCCCcccccccccC
Q 019620           83 YFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKS  162 (338)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~~~  162 (338)
                      .+|+.+|....+..        .+..+++..++++++.||+++.++++|++++|+|++.+....                
T Consensus        85 ~~Y~~~K~~~~~~~--------~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~----------------  140 (299)
T KOG0764|consen   85 FFYDFLKSFITEGF--------NSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV----------------  140 (299)
T ss_pred             HHHHHHHHHHhcCC--------CcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc----------------
Confidence            99999999885432        122358899999999999999999999999999999996543                


Q ss_pred             CCCCCCCCCCChHHHHHHHHHhhCccccccchhhhhhhccchhhHHHHHHHHHHHHHHHhhhhhcCCCCCCHHHHHHHHH
Q 019620          163 SHATVEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGA  242 (338)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  242 (338)
                          ...+|+++++++++|+++||++|||+|+.|.++.+...+++|..||.+|.++.+..+.  ..+...+.+..++.++
T Consensus       141 ----~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~GvshgAiQF~~YE~lK~~~~~~~~~--~~d~~l~n~~~i~~as  214 (299)
T KOG0764|consen  141 ----QSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLLGVSHGAIQFPAYEELKLRKNRKQGR--STDNHLSNLDYIALAS  214 (299)
T ss_pred             ----cccccccHHHHHHHHHHHHhHHHHHhhhhhHhhhhchhhhhhhhHHHHHHHHHHhcCC--CcccchhhHHHHHHHH
Confidence                3468999999999999999999999999999999999999999999999998754321  1223456678888888


Q ss_pred             HHHHHHHHhhccHHHHHHHHhhccccCCCcccccCcHHHHHHHHHHhhchhhcccchhhhHHHHhHHHHHHHHHHHHHHH
Q 019620          243 LAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEELVK  322 (338)
Q Consensus       243 ~ag~~~~~~~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gl~rG~~~~~~~~~~~~~i~~~~ye~~~~  322 (338)
                      ++.++|+.+|||.+|+|+|||.++     ....|.++++|++++|+.||++|||+|+.++++|.+|.++|+|.+||.+++
T Consensus       215 ~SKv~Ast~TYP~qVlRtRLQ~~~-----~~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~  289 (299)
T KOG0764|consen  215 LSKVFASTLTYPHQVLRTRLQDQS-----DNPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKH  289 (299)
T ss_pred             HHHHHHHHhcchHHHHHHHHHhcc-----cCcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHH
Confidence            999999999999999999999874     367999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 019620          323 GARFLL  328 (338)
Q Consensus       323 ~~~~~~  328 (338)
                      .+....
T Consensus       290 ~L~~~~  295 (299)
T KOG0764|consen  290 FLVTHR  295 (299)
T ss_pred             HHhccc
Confidence            887654



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-04
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 75/330 (22%), Positives = 122/330 (36%), Gaps = 66/330 (20%) Query: 22 TYPLQTVNARQQTERDVKKEKRK---------LGTVAQMCQVVKHEGWGRLYGGLTPSI- 71 T+PL T R Q + + + R LGT+ M V+ EG LY GL + Sbjct: 19 TFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTM---VRTEGPRSLYNGLVAGLQ 75 Query: 72 ---VGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLL 128 + G+Y Q + +E A GIG S L+ + G + V + Sbjct: 76 RQMSFASVRIGLYDSVKQFYTKGSEHA-------GIG-------SRLLAGSTTGALAVAV 121 Query: 129 TNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQEVYDEAGLW 188 P VV R Q + + +TVE A + + E G+ Sbjct: 122 AQPTDVVKVRFQAQARA------------GGGRRYQSTVE--------AYKTIAREEGIR 161 Query: 189 GFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGAL-AKLG 247 G W+G P + + + ++ ++K + L D L A A Sbjct: 162 GLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDD------LPCHFTSAFGAGFC 215 Query: 248 ATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSV 307 T++ P+ VVK R + + ++H G L M+R EG FY+G ++ Sbjct: 216 TTVIASPVDVVKTRY----MNSALGQYHSAG--HCALTMLRKEGPRAFYKGFMPSFLRLG 269 Query: 308 LAAAVLFMIKEELVKGARFLLAQNKPKSKP 337 V+F+ E+L R L+A + + P Sbjct: 270 SWNVVMFVTYEQL---KRALMAAYQSREAP 296

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-41
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-26
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 6e-09
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 8e-09
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-37
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-23
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-04
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  146 bits (370), Expect = 1e-41
 Identities = 49/316 (15%), Positives = 114/316 (36%), Gaps = 38/316 (12%)

Query: 9   LAGAGGGIIAQLITYPLQTVNARQQT---ERDVKKEKRKLGTVAQMCQVVKHEGWGRLYG 65
           LAG     I++    P++ V    Q     + +  EK+  G +  + ++ K +G+   + 
Sbjct: 12  LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 71

Query: 66  GLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVN 125
           G   +++    +Q + + F   ++                        +L     AG  +
Sbjct: 72  GNLANVIRYFPTQALNFAFKDKYKQ-----IFLGGVDRHKQFWRYFAGNLASGGAAGATS 126

Query: 126 VLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQEVYDEA 185
           +    P+    TR+          +                         + I +++   
Sbjct: 127 LCFVYPLDFARTRLAADVGKGAAQREFTG-------------------LGNCITKIFKSD 167

Query: 186 GLWGFWRGVFPTLI-MVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLGALA 244
           GL G ++G   ++  ++   +  F +Y+T       +  L    N  +     +++    
Sbjct: 168 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTA------KGMLPDPKNVHIIVS--WMIAQTV 219

Query: 245 KLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIV 304
              A +V+YP   V+ R+   Q         Y GT+D   K+ + EG   F++G  + ++
Sbjct: 220 TAVAGLVSYPFDTVRRRMMM-QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVL 278

Query: 305 QSVLAAAVLFMIKEEL 320
           + +   A + ++ +E+
Sbjct: 279 RGM-GGAFVLVLYDEI 293


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=2.5e-56  Score=400.27  Aligned_cols=287  Identities=21%  Similarity=0.306  Sum_probs=251.6

Q ss_pred             HHHHHHhHHHHHHHHhhchhHHHHHHHhcccccch------hhccccHHHHHHHHHHhhhhhhhccCcchhHHHhhhhhh
Q 019620            6 INGLAGAGGGIIAQLITYPLQTVNARQQTERDVKK------EKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQG   79 (338)
Q Consensus         6 ~~~~ag~~a~~~~~~~~~Pld~ik~r~Q~~~~~~~------~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~l~~~~~~~   79 (338)
                      .++++|++||+++.+++||||+||+|+|++.....      ...|++.++++++|+++||++|||||+.+++++.++..+
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   82 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS   82 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999875322      246889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccCCCCCCCcchHHHHHHHHHHHHhHhHhcchHHHHHHHHhhcccccCCCCCCccccccc
Q 019620           80 VYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSS  159 (338)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~  159 (338)
                      ++|.+||.+++.+....          ...+.+..+++|++|++++.++++|+|+||+|+|++...              
T Consensus        83 i~f~~ye~~k~~~~~~~----------~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--------------  138 (303)
T 2lck_A           83 VRIGLYDSVKQFYTKGS----------EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA--------------  138 (303)
T ss_dssp             HTTTHHHHHHHHHSCCC----------SSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC--------------
T ss_pred             HHHHHHHHHHHHHhcCC----------cCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc--------------
Confidence            99999999998764310          124678899999999999999999999999999998431              


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHhhCccccccchhhhhhh-ccchhhHHHHHHHHHHHHHHHhhhhhcCCCCCCHHHHH
Q 019620          160 EKSSHATVEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIM-VSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIF  238 (338)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (338)
                            ....+|++.++++++|++++|+++||||+.+++++ ++..+++|.+||.+++.+.+.      .....+....+
T Consensus       139 ------~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~------~~~~~~~~~~~  206 (303)
T 2lck_A          139 ------GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKA------NLMTDDLPCHF  206 (303)
T ss_dssp             ------CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT------TSCCSCHHHHH
T ss_pred             ------CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc------cCCCCchHHHH
Confidence                  12245789999999999999999999999999999 889999999999999977542      12345677889


Q ss_pred             HHHHHHHHHHHHhhccHHHHHHHHhhccccCCCcccccCcHHHHHHHHHHhhchhhcccchhhhHHHHhHHHHHHHHHHH
Q 019620          239 LLGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKE  318 (338)
Q Consensus       239 ~~g~~ag~~~~~~~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gl~rG~~~~~~~~~~~~~i~~~~ye  318 (338)
                      ++|+++|++++++++|+|+||+|||++..      ..|.++++|+++|+++||++|||||+.++++|.+|..+++|.+||
T Consensus       207 ~~g~~ag~~~~~~~~P~dvvktrlq~~~~------~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye  280 (303)
T 2lck_A          207 TSAFGAGFCTTVIASPVDVVKTRYMNSAL------GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYE  280 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCS------SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHHHhccc------cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999742      469999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCC
Q 019620          319 ELVKGARFLLAQNKPK  334 (338)
Q Consensus       319 ~~~~~~~~~~~~~~~~  334 (338)
                      .+++.+.+...+.++.
T Consensus       281 ~~k~~l~~~~~~~~~~  296 (303)
T 2lck_A          281 QLKRALMAAYQSREAP  296 (303)
T ss_dssp             HHHSCCCCHHHHHHCC
T ss_pred             HHHHHHHHhccCCCCC
Confidence            9999887665554443



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-21
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 7e-11
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 90.2 bits (222), Expect = 2e-21
 Identities = 48/319 (15%), Positives = 113/319 (35%), Gaps = 36/319 (11%)

Query: 5   LINGLAGAGGGIIAQLITYPLQTVNARQQTER---DVKKEKRKLGTVAQMCQVVKHEGWG 61
           L + LAG     I++    P++ V    Q +     +  EK+  G +  + ++ K +G+ 
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFL 66

Query: 62  RLYGGLTPSIVGTAASQGVYYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALA 121
             + G   +++    +Q + + F   ++                        +L     A
Sbjct: 67  SFWRGNLANVIRYFPTQALNFAFKDKYKQI-----FLGGVDRHKQFWRYFAGNLASGGAA 121

Query: 122 GCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSEKSSHATVEPPPFATSHAIQEV 181
           G  ++    P+    TR+          +                         + I ++
Sbjct: 122 GATSLCFVYPLDFARTRLAADVGKGAAQREFTG-------------------LGNCITKI 162

Query: 182 YDEAGLWGFWRGVFPTLIMVSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFLLG 241
           +   GL G ++G   ++  +       ++Y      + +       D   V  +  +++ 
Sbjct: 163 FKSDGLRGLYQGFNVSVQGI-------IIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIA 215

Query: 242 ALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGT 301
                 A +V+YP   V+ R+   Q         Y GT+D   K+ + EG   F++G  +
Sbjct: 216 QTVTAVAGLVSYPFDTVRRRMMM-QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWS 274

Query: 302 KIVQSVLAAAVLFMIKEEL 320
            +++ +   A + ++ +E+
Sbjct: 275 NVLRGM-GGAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.6e-51  Score=365.32  Aligned_cols=283  Identities=18%  Similarity=0.279  Sum_probs=245.0

Q ss_pred             hHHHHHHHhHHHHHHHHhhchhHHHHHHHhcccccc---hhhccccHHHHHHHHHHhhhhhhhccCcchhHHHhhhhhhH
Q 019620            4 ALINGLAGAGGGIIAQLITYPLQTVNARQQTERDVK---KEKRKLGTVAQMCQVVKHEGWGRLYGGLTPSIVGTAASQGV   80 (338)
Q Consensus         4 ~~~~~~ag~~a~~~~~~~~~Pld~ik~r~Q~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~l~~~~~~~~   80 (338)
                      -+.++++|++|++++.+++||||+||+|+|++....   ....+++.++++++++++||+++||||+.+.++...+...+
T Consensus         6 ~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~   85 (292)
T d1okca_           6 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQAL   85 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhcccch
Confidence            467899999999999999999999999999987543   33678899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCcchHHHHHHHHHHHHhHhHhcchHHHHHHHHhhcccccCCCCCCcccccccc
Q 019620           81 YYYFYQIFRNNAEVAALEHKKRGIGDGSVGMLSSLVVAALAGCVNVLLTNPIWVVVTRMQTHTKTLKKSKPCRSELTSSE  160 (338)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~Pld~ik~r~q~~~~~~~~~~~~~~~~~~~~  160 (338)
                      +|.+|+.+++.+.......     .+........+++|.+|++++.++++|+|++|+|+|++....              
T Consensus        86 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~--------------  146 (292)
T d1okca_          86 NFAFKDKYKQIFLGGVDRH-----KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG--------------  146 (292)
T ss_dssp             HHHHHHHHHHHHHTTCCTT-----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS--------------
T ss_pred             hHHHHHHHHHHHhcccccc-----cccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc--------------
Confidence            9999999999887653322     112234567788999999999999999999999999985432              


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHhhCccccccchhhhhhh-ccchhhHHHHHHHHHHHHHHHhhhhhcCCCCCCHHHHHH
Q 019620          161 KSSHATVEPPPFATSHAIQEVYDEAGLWGFWRGVFPTLIM-VSNPSIQFMLYETMLKKIKERRALRKKDNSGVTALEIFL  239 (338)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (338)
                           .....+.+..++++++++++|+++||+|+.++++| +++.+++|..||.+|+.+.+        .........++
T Consensus       147 -----~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~~  213 (292)
T d1okca_         147 -----AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD--------PKNVHIIVSWM  213 (292)
T ss_dssp             -----TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCG--------GGCSCHHHHHH
T ss_pred             -----ccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccc--------ccccchHHHHH
Confidence                 23345779999999999999999999999999999 89999999999999976543        23467788899


Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHhhccccCCCcccccCcHHHHHHHHHHhhchhhcccchhhhHHHHhHHHHHHHHHHHH
Q 019620          240 LGALAKLGATIVTYPLLVVKARLQAKQVTTGDKRHHYKGTLDAILKMIRYEGFYGFYQGMGTKIVQSVLAAAVLFMIKEE  319 (338)
Q Consensus       240 ~g~~ag~~~~~~~~Pld~iktr~q~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~gl~rG~~~~~~~~~~~~~i~~~~ye~  319 (338)
                      ++++++++++++++|+||||+|||.+..+. .....|.++++|+++|+++||++|||||+.++++|.++ .+++|.+||+
T Consensus       214 ~~~~~~~~a~~~t~P~dvvktR~q~~~~~~-~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye~  291 (292)
T d1okca_         214 IAQTVTAVAGLVSYPFDTVRRRMMMQSGRK-GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE  291 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHHT
T ss_pred             HHHHHHHHHhhccccHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhhc
Confidence            999999999999999999999999986532 23446899999999999999999999999999999755 7899999996


Q ss_pred             H
Q 019620          320 L  320 (338)
Q Consensus       320 ~  320 (338)
                      +
T Consensus       292 l  292 (292)
T d1okca_         292 I  292 (292)
T ss_dssp             C
T ss_pred             C
Confidence            4



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure