Citrus Sinensis ID: 019629

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI
ccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHccccccccccHHHHHHHHHHccccccccEEcccccccccccccccHHHHccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHcccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccEcccccEcccEccEcccccccHHccc
mkkaagagSLLLVCLVVFGIIgvcqggelrknfyrdsCKSAEDIVRSITwknaasnpdlpaKLIRMHFhdcfvrgcdASVLINstagnkaerdavpnlslggFEVINEIKSElesrcpgivscADIVALatrdsvsfqfqkpdlwevltgrrdgsvsIAAEadlllpspfanfSELKKnfndkgltvkDLVVLSgghtigvshctFFSNrlynftgngdqdpsldpRYAAFLKTKCKSladttttaeldpgsfrkfdsHYYDILIEnkglfqsdAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNvltgtqgeirkkcsvinnpdsllhssi
MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINStagnkaerdavpnlsLGGFEVINEIKSELESRCPGIVSCADIVALATRDSvsfqfqkpdlwevlTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKsladttttaeldpgsfrKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGtqgeirkkcsvinnpdsllhssi
MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI
*******GSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGD****LDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKC**************
***********LVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKT**K***D*TTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNP********
MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI
***AAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN*********
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKAAGAGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINNPDSLLHSSI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
O23044326 Peroxidase 3 OS=Arabidops yes no 0.928 0.963 0.548 2e-93
Q9SUT2326 Peroxidase 39 OS=Arabidop no no 0.940 0.975 0.52 8e-89
Q9ZV04350 Peroxidase 24 OS=Arabidop no no 0.890 0.86 0.545 2e-88
Q9LSY7329 Peroxidase 30 OS=Arabidop no no 0.899 0.924 0.528 1e-85
P37834326 Peroxidase 1 OS=Oryza sat no no 0.881 0.914 0.514 9e-84
Q43735321 Peroxidase 27 OS=Arabidop no no 0.940 0.990 0.5 3e-83
Q9LXG3329 Peroxidase 56 OS=Arabidop no no 0.875 0.899 0.513 2e-82
Q67Z07325 Peroxidase 2 OS=Arabidops no no 0.866 0.901 0.504 4e-81
P0DI10325 Peroxidase 1 OS=Arabidops no no 0.866 0.901 0.504 4e-81
Q43387328 Peroxidase 71 OS=Arabidop no no 0.863 0.890 0.463 1e-70
>sp|O23044|PER3_ARATH Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1 Back     alignment and function desciption
 Score =  342 bits (877), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 176/321 (54%), Positives = 229/321 (71%), Gaps = 7/321 (2%)

Query: 11  LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHD 70
           L V   + GI+G  Q  +L+ NFY +SC +AE IV+     + ++ P L A LIRMHFHD
Sbjct: 9   LSVSFFLVGIVGPIQA-QLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHD 67

Query: 71  CFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALA 130
           CFVRGCD SVLINST+GN AERDA PNL++ GF  I+ IKS LE++CPGIVSCADI+ALA
Sbjct: 68  CFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALA 126

Query: 131 TRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDL 190
           +RD+V F    P+ W V TGRRDG +S AAEA   +P P +N + L+  F ++GL +KDL
Sbjct: 127 SRDAVVFT-GGPN-WSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDL 184

Query: 191 VVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKT-KCKSLADTTTTAELD 249
           V+LSG HTIGVSHC+ F+NRLYNFTG G QDP+LD  YAA LK+ KC SL D  T  E+D
Sbjct: 185 VLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMD 244

Query: 250 PGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQD--KFFTEFAQSMKRM 307
           PGS + FD  YY ++++ +GLFQSD+AL TN    + +  +       FF+EFA+SM++M
Sbjct: 245 PGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKM 304

Query: 308 GAMNVLTGTQGEIRKKCSVIN 328
           G +NV TG+ G +R++CSV N
Sbjct: 305 GRINVKTGSAGVVRRQCSVAN 325
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9SUT2|PER39_ARATH Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZV04|PER24_ARATH Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSY7|PER30_ARATH Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1 Back     alignment and function description
>sp|P37834|PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2 Back     alignment and function description
>sp|Q43735|PER27_ARATH Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXG3|PER56_ARATH Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1 Back     alignment and function description
>sp|Q67Z07|PER2_ARATH Peroxidase 2 OS=Arabidopsis thaliana GN=PER2 PE=2 SV=1 Back     alignment and function description
>sp|P0DI10|PER1_ARATH Peroxidase 1 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
225436825323 PREDICTED: peroxidase 3 isoform 1 [Vitis 0.934 0.978 0.704 1e-131
356500246322 PREDICTED: peroxidase 3-like [Glycine ma 0.940 0.987 0.689 1e-131
356536743322 PREDICTED: peroxidase 3-like [Glycine ma 0.940 0.987 0.683 1e-130
122726082325 putative peroxidase [Cinnamomum micranth 0.943 0.981 0.693 1e-129
146335701325 putative peroxidase [Cinnamomum micranth 0.943 0.981 0.690 1e-129
147772815376 hypothetical protein VITISV_044355 [Viti 0.920 0.827 0.706 1e-128
146289957325 putative peroxidase [Cinnamomum micranth 0.943 0.981 0.687 1e-128
388505918325 unknown [Lotus japonicus] 0.949 0.987 0.666 1e-127
388506902325 unknown [Lotus japonicus] 0.949 0.987 0.666 1e-127
359479772316 PREDICTED: peroxidase 3 isoform 2 [Vitis 0.914 0.977 0.688 1e-126
>gi|225436825|ref|XP_002270603.1| PREDICTED: peroxidase 3 isoform 1 [Vitis vinifera] gi|296086645|emb|CBI32280.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/318 (70%), Positives = 266/318 (83%), Gaps = 2/318 (0%)

Query: 11  LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHD 70
           LLV +VV G++GVCQGG LRK +Y+ +C  AE+IV+ +TW++ +SNP+LPAKLIRMHFHD
Sbjct: 7   LLVSMVVLGVLGVCQGGSLRKKYYKSACPLAEEIVQKVTWRHVSSNPNLPAKLIRMHFHD 66

Query: 71  CFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALA 130
           CFVRGCD SVL+NSTA + AERDA PNLSL GF+VI++IKS+LE  CPG+VSCADI+ALA
Sbjct: 67  CFVRGCDGSVLLNSTANSTAERDAAPNLSLAGFDVIDDIKSQLEKTCPGVVSCADILALA 126

Query: 131 TRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDL 190
           +RDSVSFQF+KP +WEVLTGRRDG VS+A+EA   +P P  NFS LK++F  KGLTV DL
Sbjct: 127 SRDSVSFQFKKP-MWEVLTGRRDGKVSLASEALANIPPPVFNFSSLKQSFASKGLTVHDL 185

Query: 191 VVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDP 250
           VVLSG HTIGV HC  FSNRLYNFTG GD DPSL+  YAAFLKTKC+SL+DTT   E+DP
Sbjct: 186 VVLSGAHTIGVGHCNGFSNRLYNFTGKGDADPSLNSTYAAFLKTKCRSLSDTTAV-EMDP 244

Query: 251 GSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAM 310
            S R FDS+Y+ IL +NKGLFQSDAALLTNKGAR I +EL++   FFTEFAQSMKRMGA+
Sbjct: 245 QSSRNFDSNYFAILKQNKGLFQSDAALLTNKGARKIALELQDSADFFTEFAQSMKRMGAI 304

Query: 311 NVLTGTQGEIRKKCSVIN 328
            VLTG  GEIRKKCS++N
Sbjct: 305 GVLTGRAGEIRKKCSIVN 322

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356500246|ref|XP_003518944.1| PREDICTED: peroxidase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356536743|ref|XP_003536895.1| PREDICTED: peroxidase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|122726082|gb|ABM66586.1| putative peroxidase [Cinnamomum micranthum f. kanehirae] Back     alignment and taxonomy information
>gi|146335701|gb|ABQ23446.1| putative peroxidase [Cinnamomum micranthum f. kanehirae] Back     alignment and taxonomy information
>gi|147772815|emb|CAN71671.1| hypothetical protein VITISV_044355 [Vitis vinifera] Back     alignment and taxonomy information
>gi|146289957|gb|ABQ18321.1| putative peroxidase [Cinnamomum micranthum f. kanehirae] Back     alignment and taxonomy information
>gi|388505918|gb|AFK41025.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|388506902|gb|AFK41517.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|359479772|ref|XP_003632355.1| PREDICTED: peroxidase 3 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2207210326 RCI3 "RARE COLD INDUCIBLE GENE 0.931 0.966 0.555 1.6e-86
TAIR|locus:2128308326 AT4G11290 [Arabidopsis thalian 0.940 0.975 0.52 6.4e-83
TAIR|locus:2064950350 AT2G39040 [Arabidopsis thalian 0.890 0.86 0.545 8.2e-83
TAIR|locus:2093099329 AT3G21770 [Arabidopsis thalian 0.926 0.951 0.523 7.6e-80
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.940 0.990 0.5 4.8e-78
TAIR|locus:2150946329 AT5G15180 [Arabidopsis thalian 0.920 0.945 0.501 1.3e-77
TAIR|locus:2817952325 AT1G05240 [Arabidopsis thalian 0.923 0.96 0.492 3.1e-76
TAIR|locus:2207215325 AT1G05250 [Arabidopsis thalian 0.923 0.96 0.492 3.1e-76
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.955 0.955 0.423 1.8e-64
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.955 0.958 0.427 3.7e-64
TAIR|locus:2207210 RCI3 "RARE COLD INDUCIBLE GENE 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 179/322 (55%), Positives = 230/322 (71%)

Query:    11 LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHD 70
             L V   + GI+G  Q  +L+ NFY +SC +AE IV+     + ++ P L A LIRMHFHD
Sbjct:     9 LSVSFFLVGIVGPIQA-QLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHD 67

Query:    71 CFVRGCDASVLINSTAGNKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALA 130
             CFVRGCD SVLINST+GN AERDA PNL++ GF  I+ IKS LE++CPGIVSCADI+ALA
Sbjct:    68 CFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALA 126

Query:   131 TRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDL 190
             +RD+V F    P+ W V TGRRDG +S AAEA   +P P +N + L+  F ++GL +KDL
Sbjct:   127 SRDAVVFT-GGPN-WSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDL 184

Query:   191 VVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKT-KCKSLADTTTTAELD 249
             V+LSG HTIGVSHC+ F+NRLYNFTG G QDP+LD  YAA LK+ KC SL D  T  E+D
Sbjct:   185 VLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMD 244

Query:   250 PGSFRKFDSHYYDILIENKGLFQSDAALLTNKGA-RNIVMELRNQ-DKFFTEFAQSMKRM 307
             PGS + FD  YY ++++ +GLFQSD+AL TN     NI   L      FF+EFA+SM++M
Sbjct:   245 PGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKM 304

Query:   308 GAMNVLTGTQGEIRKKCSVINN 329
             G +NV TG+ G +R++CSV N+
Sbjct:   305 GRINVKTGSAGVVRRQCSVANS 326
GO:0004601 "peroxidase activity" evidence=IEA;ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0009269 "response to desiccation" evidence=IMP
GO:0009409 "response to cold" evidence=IEP
GO:0042538 "hyperosmotic salinity response" evidence=IMP
GO:0006826 "iron ion transport" evidence=RCA
GO:0010054 "trichoblast differentiation" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA
TAIR|locus:2128308 AT4G11290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2064950 AT2G39040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093099 AT3G21770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150946 AT5G15180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2817952 AT1G05240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207215 AT1G05250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O23044PER3_ARATH1, ., 1, 1, ., 1, ., 70.54820.92890.9631yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.946
3rd Layer1.11.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00023610001
SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (323 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-168
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 4e-93
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-59
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-17
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-09
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 7e-08
cd00692328 cd00692, ligninase, Ligninase and other manganese- 4e-04
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 6e-04
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  470 bits (1213), Expect = e-168
 Identities = 166/301 (55%), Positives = 208/301 (69%), Gaps = 4/301 (1%)

Query: 28  ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAG 87
           +L   FY  SC +AE IVRS+      ++P L A L+R+HFHDCFVRGCDASVL++STA 
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 88  NKAERDAVPNLSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEV 147
           N +E+DA PNLSL GF+VI++IK+ LE+ CPG+VSCADI+ALA RD+V      P  +EV
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAG-GPS-YEV 118

Query: 148 LTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFF 207
             GRRDG VS A +    LPSPF + S+L   F  KGLTV DLV LSG HTIG +HC+ F
Sbjct: 119 PLGRRDGRVSSANDVG-NLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSF 177

Query: 208 SNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIEN 267
           S+RLYNF+G GD DP+LDP YAA L+ KC +  D  T   LDPG+   FD+ YY  L+  
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237

Query: 268 KGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSV 326
           +GL  SD ALL++   R IV     NQD FF +FA +M +MG + VLTG+QGEIRK C V
Sbjct: 238 RGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRV 297

Query: 327 I 327
           +
Sbjct: 298 V 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 99.98
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 99.97
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.95
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.3
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.6e-107  Score=783.60  Aligned_cols=299  Identities=46%  Similarity=0.813  Sum_probs=284.1

Q ss_pred             hcCCCCCcCcccccChhHHHHHHHHHHHHHhcCCCccchhhhhhcccccCCCCCceEeecCCCCCcccccCCCCCCCchh
Q 019629           24 CQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGGF  103 (338)
Q Consensus        24 ~~~~~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSill~~~~~~~~E~~~~~N~~L~g~  103 (338)
                      +++++|+++||++|||++|+||++.|++.+.+||+++|++|||+||||||+||||||||+++   ..||++++|.+|+||
T Consensus        20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf   96 (324)
T PLN03030         20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGY   96 (324)
T ss_pred             chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchH
Confidence            34567999999999999999999999999999999999999999999999999999999964   369999999999999


Q ss_pred             HHHHHHHHHhhhcCCCCCcHHHHHHhhhhhhhhcccCCCceeEEeCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHhC
Q 019629          104 EVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDK  183 (338)
Q Consensus       104 ~~I~~iK~~le~~cp~~VScADilalAar~av~~~~GG~P~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~  183 (338)
                      ++|+.||+++|++||++||||||||+||||||+++ || |.|+|++||||+++|.+.++. +||.|+.++++|++.|+++
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~-gG-P~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~  173 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLT-NG-LTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAK  173 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhcccccc-CC-CceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHc
Confidence            99999999999999999999999999999999999 99 999999999999999887774 8999999999999999999


Q ss_pred             CCCccCcEEeeccccccccccccccccccccCCCC-CCCCCCCHHHHHHHHhcCCCCCCCCCcccCCCCCCcccchHHHH
Q 019629          184 GLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNG-DQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYD  262 (338)
Q Consensus       184 Gls~~dlVaLsGaHtiG~~hc~~f~~Rl~~f~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~  262 (338)
                      ||+.+|||+||||||||++||.+|.+|||||++++ .+||+||+.|+..|++.||..+++++.+++|+.||.+|||+||+
T Consensus       174 Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~  253 (324)
T PLN03030        174 GLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFS  253 (324)
T ss_pred             CCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHH
Confidence            99999999999999999999999999999999875 58999999999999999996433344688999999999999999


Q ss_pred             HHhhcccCCccchhccCCcchHHHHHHhhc-h----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 019629          263 ILIENKGLFQSDAALLTNKGARNIVMELRN-Q----DKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN  328 (338)
Q Consensus       263 ~l~~~~glL~SD~~L~~d~~t~~~V~~yA~-~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn  328 (338)
                      ||++++|+|+|||+|++|++|+++|++||. +    ++|+++|++||+|||+|+|+||.+||||++|++||
T Consensus       254 nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        254 NLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            999999999999999999999999999997 5    49999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-71
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-64
1sch_A294 Peanut Peroxidase Length = 294 2e-61
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 6e-61
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-60
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 5e-60
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-59
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 7e-59
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 8e-59
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 9e-59
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 1e-58
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-58
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 1e-58
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 3e-58
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 4e-58
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 7e-58
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 1e-57
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 5e-57
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 2e-54
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 1e-04
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 1e-04
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 1e-04
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 1e-04
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 1e-04
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-04
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 2e-04
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-04
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-04
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-04
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-04
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 144/306 (47%), Positives = 193/306 (63%), Gaps = 6/306 (1%)
Query: 28  ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAG 87
           +L+  FY  SC +AE +V+       A+N  +   LIRMHFHDCFVRGCDASVL++STA 
Sbjct: 1   DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTAN 60
Query: 88  NKAERDAVPN-LSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWE 146
           N AE+DA+PN  SL GFEVI   KS +E+ CP  VSCADI+A A RDS +        ++
Sbjct: 61  NTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNI--TYQ 118
Query: 147 VLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTF 206
           V +GRRDG+VS+A+EA+  +PSP  N ++L  +F +K LT  ++V LSG H+IGV+HC+ 
Sbjct: 119 VPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSS 178
Query: 207 FSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLAD--TTTTAELDPGSFRKFDSHYYDIL 264
           F+NRLYNF      DP+L P YAA L+  C + +   T  T  LD  +    D+ YY  +
Sbjct: 179 FTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGV 238
Query: 265 IENKGLFQSDAALLTNKGARNIV-MELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKK 323
               GL  SD AL+T       V     N   + ++FAQ+M +MG + VLTGTQGEIR  
Sbjct: 239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTN 298
Query: 324 CSVINN 329
           CSV+N+
Sbjct: 299 CSVVNS 304
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-168
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-168
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-167
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-164
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-161
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-159
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-156
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 7e-69
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 4e-58
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-57
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-54
2e39_A344 Peroxidase; heme protein, coordination geometry of 4e-52
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 9e-49
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 4e-47
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 5e-10
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 7e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  469 bits (1210), Expect = e-168
 Identities = 144/306 (47%), Positives = 193/306 (63%), Gaps = 6/306 (1%)

Query: 28  ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAG 87
           +L+  FY  SC +AE +V+       A+N  +   LIRMHFHDCFVRGCDASVL++STA 
Sbjct: 1   DLQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTAN 60

Query: 88  NKAERDAVPN-LSLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWE 146
           N AE+DA+PN  SL GFEVI   KS +E+ CP  VSCADI+A A RDS +        ++
Sbjct: 61  NTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLA-GNIT-YQ 118

Query: 147 VLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTF 206
           V +GRRDG+VS+A+EA+  +PSP  N ++L  +F +K LT  ++V LSG H+IGV+HC+ 
Sbjct: 119 VPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSS 178

Query: 207 FSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLAD--TTTTAELDPGSFRKFDSHYYDIL 264
           F+NRLYNF      DP+L P YAA L+  C + +   T  T  LD  +    D+ YY  +
Sbjct: 179 FTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGV 238

Query: 265 IENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKK 323
               GL  SD AL+T       V     N   + ++FAQ+M +MG + VLTGTQGEIR  
Sbjct: 239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTN 298

Query: 324 CSVINN 329
           CSV+N+
Sbjct: 299 CSVVNS 304
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.2e-109  Score=795.18  Aligned_cols=298  Identities=48%  Similarity=0.783  Sum_probs=290.9

Q ss_pred             CCcCcccccChhHHHHHHHHHHHHHhcCCCccchhhhhhcccccCCCCCceEeecCCCCCcccccCCCCC-CCchhHHHH
Q 019629           29 LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNL-SLGGFEVIN  107 (338)
Q Consensus        29 l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSill~~~~~~~~E~~~~~N~-~L~g~~~I~  107 (338)
                      |+++||++|||++|+|||+.|++++.+||+++|++||||||||||+||||||||++++++.+||++++|. +|+||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999987788999999998 899999999


Q ss_pred             HHHHHhhhcCCCCCcHHHHHHhhhhhhhhcccCCCceeEEeCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHhCCCCc
Q 019629          108 EIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTV  187 (338)
Q Consensus       108 ~iK~~le~~cp~~VScADilalAar~av~~~~GG~P~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~  187 (338)
                      +||++||+.||++||||||||||||+||+++ || |.|+|++||+|+++++..+++.+||+|+.++++|++.|++||||+
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~-GG-P~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLA-GN-ITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHH-HC-CCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhcc-CC-CccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999 99 999999999999999998888899999999999999999999999


Q ss_pred             cCcEEeeccccccccccccccccccccCCCCCCCCCCCHHHHHHHHhcCCCCCC--CCCcccCCCCCCcccchHHHHHHh
Q 019629          188 KDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLAD--TTTTAELDPGSFRKFDSHYYDILI  265 (338)
Q Consensus       188 ~dlVaLsGaHtiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~lD~~tp~~FDN~Yy~~l~  265 (338)
                      +||||||||||||++||.+|.+|||||+|++.+||+||+.|++.|++.||..++  ++++++||+.||.+|||+||++|+
T Consensus       160 ~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~  239 (304)
T 3hdl_A          160 DEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ  239 (304)
T ss_dssp             HHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHH
Confidence            999999999999999999999999999998889999999999999999998766  677889999999999999999999


Q ss_pred             hcccCCccchhccCCcchHHHHHHhhc-hHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 019629          266 ENKGLFQSDAALLTNKGARNIVMELRN-QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN  328 (338)
Q Consensus       266 ~~~glL~SD~~L~~d~~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn  328 (338)
                      .++|||+|||+|+.|++|+++|++||. +++||++|++||+||++|+|+||.+||||++|++||
T Consensus       240 ~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             TTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            999999999999999999999999999 999999999999999999999999999999999999
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-117
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-113
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-108
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-108
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-107
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-104
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 8e-60
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 1e-56
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-52
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 2e-37
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-33
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 4e-33
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  337 bits (866), Expect = e-117
 Identities = 128/304 (42%), Positives = 186/304 (61%), Gaps = 6/304 (1%)

Query: 29  LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGN 88
           L   FYR++C +   IV  + +  + ++P + A L+R+HFHDCFV+GCD SVL+N+T   
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTI 61

Query: 89  KAERDAVPNL-SLGGFEVINEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEV 147
           ++E+DA+PN+ S+ G +V+N+IK+ +E+ CP  VSCADI+A+A   +       P  W V
Sbjct: 62  ESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIAS-VLGGGPG-WPV 119

Query: 148 LTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFF 207
             GRRD   +    A+  LP+PF N ++LK +F  +GL   DLV LSGGHT G + C+ F
Sbjct: 120 PLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTF 179

Query: 208 SNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIEN 267
            NRLYNF+  G+ DP+L+  Y   L+ +C   A       LD  +  +FD+ YY  L++ 
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL 239

Query: 268 KGLFQSDAALLTNKGA--RNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKC 324
            GL QSD  L +  GA    IV     NQ+ FF+ F  SM +MG + VLTG +GEIR +C
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQC 299

Query: 325 SVIN 328
           + +N
Sbjct: 300 NFVN 303
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 99.98
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.96
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=8e-104  Score=754.84  Aligned_cols=299  Identities=41%  Similarity=0.769  Sum_probs=291.1

Q ss_pred             CCCcCcccccChhHHHHHHHHHHHHHhcCCCccchhhhhhcccccCCCCCceEeecCCCCCcccccCCCCCC-CchhHHH
Q 019629           28 ELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLS-LGGFEVI  106 (338)
Q Consensus        28 ~l~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSill~~~~~~~~E~~~~~N~~-L~g~~~I  106 (338)
                      ||+.+||++|||++|+||++.|++.+.+||+++|++|||+||||||+||||||||+++.++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999999888889999999985 6899999


Q ss_pred             HHHHHHhhhcCCCCCcHHHHHHhhhhhhhhcccCCCceeEEeCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHhCCCC
Q 019629          107 NEIKSELESRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLT  186 (338)
Q Consensus       107 ~~iK~~le~~cp~~VScADilalAar~av~~~~GG~P~~~v~~GR~D~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls  186 (338)
                      |.||++||..||++|||||||+||||+||+++ || |.|+|++||+|+++|+..++..+||.|+.++++|++.|++||||
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~-GG-P~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLG-GG-PGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN  158 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTT-TC-CCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhc-CC-CcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999 99 99999999999999999888889999999999999999999999


Q ss_pred             ccCcEEeeccccccccccccccccccccCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCcccCCCCCCcccchHHHHHHhh
Q 019629          187 VKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIE  266 (338)
Q Consensus       187 ~~dlVaLsGaHtiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~  266 (338)
                      .+||||||||||||++||.+|..|+|+|.+++.+||++++.|+..|++.||..+.+.+.+++|..||.+|||+||++++.
T Consensus       159 ~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~  238 (304)
T d1fhfa_         159 TLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQ  238 (304)
T ss_dssp             HHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhh
Confidence            99999999999999999999999999999998999999999999999999988777778899999999999999999999


Q ss_pred             cccCCccchhccCCc--chHHHHHHhhc-hHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 019629          267 NKGLFQSDAALLTNK--GARNIVMELRN-QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN  328 (338)
Q Consensus       267 ~~glL~SD~~L~~d~--~t~~~V~~yA~-~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn  328 (338)
                      ++|+|+|||+|+.||  +|+++|++||. +++|+++|++||+||++|+||||.+||||++|++||
T Consensus       239 ~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             TCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            999999999999997  69999999999 999999999999999999999999999999999999
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure