Citrus Sinensis ID: 019643

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MPNLESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKISEDA
cccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccEEEccccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEccccccEEEEEEEEcccccccccccccccccHHHHHHHHHHHHHcccccccccEEcccccc
cccccEccHcccccccccccccccHHHccccccccccEEEcccHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccccEccHHHHHHccHHcEEEEcccccHHHEEEEEEcccHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccccccccHHHHHHHHHHHHHccHHHHHHHHHHHcccc
mpnlesyppvfrrkhndfdpdesvqdfqecyhsdpvptldlgslnLEKLGDACknwglfrlvshgipETLMSQLRSQAKNLFSFsfeskqrlftnkpaavsyfwgtpaltpsgaalarapqsinwvegfnvpltqlsdrnqyfqgqqdplfdSFRLSLEEYGKHMSRIARTIFEAMVRNLHldstqshsdlsestglvrvyrypkfskadealgmevhtdssvlsilnedqvgglevfkddkwllvqpipgsliVNLGDMMQAISNDEYMSVKHRVKvnkneerhsvcyfvfpgegsvirssrykpftysdfQARVQHDIKTLGFKVGLQRFKISEDA
mpnlesyppvfrrkhnDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLdstqshsdlsestglvrVYRYPKFskadealgmeVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLgfkvglqrfkiseda
MPNLESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKISEDA
**************************FQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHL************TGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFK*****
*PNLESYPPVFRR*****************YHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQR**********YFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKIS***
MPNLESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDS*********STGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKISEDA
***LESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKIS***
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPNLESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKISEDA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
O49561338 Gibberellin 2-beta-dioxyg no no 0.789 0.789 0.348 1e-47
Q9C6I4336 Gibberellin 2-beta-dioxyg no no 0.825 0.830 0.312 5e-39
Q39110377 Gibberellin 20 oxidase 1 no no 0.914 0.819 0.296 1e-31
D4N502360 Codeine O-demethylase OS= N/A no 0.748 0.702 0.323 2e-31
Q9LSW7365 1-aminocyclopropane-1-car no no 0.804 0.745 0.298 3e-31
Q39224358 Protein SRG1 OS=Arabidops no no 0.866 0.818 0.283 2e-30
Q9LSW6362 1-aminocyclopropane-1-car no no 0.698 0.651 0.310 2e-30
Q07512348 Flavonol synthase/flavano N/A no 0.724 0.704 0.320 2e-30
P93824360 1-aminocyclopropane-1-car no no 0.668 0.627 0.300 3e-30
Q39103358 Gibberellin 3-beta-dioxyg no no 0.715 0.675 0.294 9e-30
>sp|O49561|G2OX8_ARATH Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2 Back     alignment and function desciption
 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 162/290 (55%), Gaps = 23/290 (7%)

Query: 47  EKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGT 106
           E +  A + WG F++++HGI   ++ ++R +   +F   F+ K +  + K +A SY WGT
Sbjct: 63  EAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSK--SEKFSAGSYRWGT 120

Query: 107 PALTPSGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMS 166
           P+ T        + + ++W E F+VP+T +SD            F +   ++E++     
Sbjct: 121 PSAT--------SIRQLSWSEAFHVPMTDISDNKD---------FTTLSSTMEKFASESE 163

Query: 167 RIARTIFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSI 226
            +A  + E +      +S+    +   +T  +R+ RYP   K  E  G+  HTDS  L+I
Sbjct: 164 ALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTI 223

Query: 227 LNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHS 286
           L +DQVGGL++ KD++W+ V+P P +LI+N+GD+ QA SN  Y SV+HRV  N   ER S
Sbjct: 224 LYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFS 283

Query: 287 VCYFVFPGEGSVIRSSR----YKPFTYSDFQARVQHDIKTLGFKVGLQRF 332
             YF+ P   +VI  S     Y+ F++ +F+ +VQ D+K  GFKVGL RF
Sbjct: 284 TAYFMCPSYDAVIECSSDRPAYRNFSFREFRQQVQEDVKKFGFKVGLPRF 333
Catalyzes the 2-beta-hydroxylation of gibberellins (GA) precursors, rendering them unable to be converted to active GAs. Hydroxylates the C20-GA GA12 and GA53, but is not active on C19-GAs, like GA1, GA4, GA9 and GA20.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 3
>sp|Q9C6I4|G2OX7_ARATH Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1 Back     alignment and function description
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|Q9LSW7|ACCH9_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 9 OS=Arabidopsis thaliana GN=At5g43440 PE=2 SV=1 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q39103|G3OX1_ARATH Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
224055327335 20G-Fe(II) oxidoreductase [Populus trich 0.961 0.970 0.632 1e-121
225434556337 PREDICTED: gibberellin 2-beta-dioxygenas 0.967 0.970 0.584 1e-109
388521021326 unknown [Medicago truncatula] 0.937 0.972 0.571 1e-102
356566072355 PREDICTED: gibberellin 2-beta-dioxygenas 0.973 0.926 0.565 1e-100
255637799355 unknown [Glycine max] 0.973 0.926 0.560 1e-98
363808112354 uncharacterized protein LOC100794065 [Gl 0.967 0.923 0.557 3e-98
15237726352 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.964 0.926 0.532 4e-91
297793401348 oxidoreductase [Arabidopsis lyrata subsp 0.964 0.936 0.523 6e-91
297819338338 predicted protein [Arabidopsis lyrata su 0.961 0.961 0.469 2e-76
42565680331 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.949 0.969 0.458 7e-74
>gi|224055327|ref|XP_002298482.1| 20G-Fe(II) oxidoreductase [Populus trichocarpa] gi|118487909|gb|ABK95776.1| unknown [Populus trichocarpa] gi|222845740|gb|EEE83287.1| 20G-Fe(II) oxidoreductase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/337 (63%), Positives = 267/337 (79%), Gaps = 12/337 (3%)

Query: 3   NLESYPPVFRRKH----NDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGL 58
           NL+SYPPVFR+++     +   D++ +  QE  + D +P LD   L+L KL +AC++WGL
Sbjct: 6   NLKSYPPVFRQQYIGIQQNSGLDDTTEQIQEVVNDDAIPVLDFQCLDLGKLQEACEDWGL 65

Query: 59  FRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALAR 118
           FRLV+HGIP TLMSQLR  ++NLFS +FESKQ LFTN    +SYFWGT ALTP+GAAL+ 
Sbjct: 66  FRLVNHGIPLTLMSQLRDHSRNLFSLTFESKQELFTN---PMSYFWGTTALTPTGAALSI 122

Query: 119 APQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVR 178
            PQ+INWVEG N+PL+QLS     FQ + + L  SFR+ LEEYG H++R+A T+F AM +
Sbjct: 123 GPQNINWVEGLNIPLSQLS----LFQKENETL-GSFRVLLEEYGGHLARLATTMFGAMAK 177

Query: 179 NLHLDSTQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVF 238
           NLHLD   S + +SESTG VRVYRYP+ S  +EA G+ VHTDSSVLSILN+DQVGGL+V 
Sbjct: 178 NLHLDPELSKTYISESTGFVRVYRYPQCSMENEAWGINVHTDSSVLSILNQDQVGGLQVL 237

Query: 239 KDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSV 298
           KDD WL V+PIP +L+ NLGDMMQAIS+D+Y SVKHRVKVNK +ER S+CYFVFP EGSV
Sbjct: 238 KDDNWLQVKPIPDTLVFNLGDMMQAISDDKYKSVKHRVKVNKEKERFSICYFVFPAEGSV 297

Query: 299 IRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKIS 335
           I+SS+Y+PFTYSDFQA+VQ D+KTLGFKVGL+RFK++
Sbjct: 298 IQSSKYRPFTYSDFQAQVQQDVKTLGFKVGLERFKVA 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434556|ref|XP_002277356.1| PREDICTED: gibberellin 2-beta-dioxygenase 8 [Vitis vinifera] gi|297745880|emb|CBI15936.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388521021|gb|AFK48572.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356566072|ref|XP_003551259.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Glycine max] Back     alignment and taxonomy information
>gi|255637799|gb|ACU19221.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|363808112|ref|NP_001242731.1| uncharacterized protein LOC100794065 [Glycine max] gi|255639969|gb|ACU20277.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|15237726|ref|NP_200674.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|8843787|dbj|BAA97335.1| gibberellin oxidase-like protein [Arabidopsis thaliana] gi|332009699|gb|AED97082.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297793401|ref|XP_002864585.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297310420|gb|EFH40844.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297819338|ref|XP_002877552.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297323390|gb|EFH53811.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42565680|ref|NP_190303.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|332644732|gb|AEE78253.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2178783352 AT5G58660 [Arabidopsis thalian 0.964 0.926 0.535 7.7e-87
TAIR|locus:2075656331 AT3G47190 [Arabidopsis thalian 0.949 0.969 0.461 4.6e-73
TAIR|locus:2036386336 GA2OX7 "gibberellin 2-oxidase 0.789 0.794 0.324 3.5e-36
TAIR|locus:2127403338 GA2OX8 "gibberellin 2-oxidase 0.624 0.624 0.366 9.2e-36
TAIR|locus:2085864352 AT3G19000 [Arabidopsis thalian 0.556 0.534 0.323 2.4e-33
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.840 0.797 0.277 3.7e-32
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.751 0.727 0.311 7.7e-32
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.875 0.848 0.272 9.8e-32
TAIR|locus:2005511377 GA20OX1 [Arabidopsis thaliana 0.926 0.830 0.299 1.6e-31
TAIR|locus:2176466362 AT5G43450 [Arabidopsis thalian 0.704 0.657 0.324 1.8e-30
TAIR|locus:2178783 AT5G58660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 183/342 (53%), Positives = 239/342 (69%)

Query:     5 ESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSH 64
             ESYPP FRR  ND +P  +    Q       +P +DL  L+ E L +ACK WG+FRL +H
Sbjct:     5 ESYPPAFRRVTNDENPPATPVIVQG--KDINIPVIDLERLDKEILREACKEWGIFRLENH 62

Query:    65 GIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSIN 124
             G+P  L S+L+  +++L S  FE K+ LF    + +SYFWGTPAL  SG AL R  Q+ N
Sbjct:    63 GVPLALTSRLQEISESLLSLPFEKKRELFAAVKSPLSYFWGTPALNRSGDALKRGAQASN 122

Query:   125 --WVEGFNVPLTQLSDRNQY-------FQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEA 175
                +EGFNVPL+ LS  ++           Q++P  +SFR+ +EEYGKH++RIA ++FEA
Sbjct:   123 LTMLEGFNVPLSSLSSLSKLPTSTCCDDDAQEEPKLESFRVLMEEYGKHITRIAVSLFEA 182

Query:   176 MVRNLHLD-STQSHSD-LSESTGLVRVYRYPKFSK--ADEALGMEVHTDSSVLSILNEDQ 231
             + + L+L+ S    S+ LSESTGL+RVYRYP+ S+  A EALGMEVHTDSSV+SIL ED+
Sbjct:   183 IAQTLNLELSGNRRSEYLSESTGLIRVYRYPQSSEEAAREALGMEVHTDSSVISILREDE 242

Query:   232 VGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKV-NKNEERHSVCYF 290
              GGLE+ K ++W  V+P+  +LIVNLGDMMQAIS+DEY SV HRVK  N+  ERHSVCYF
Sbjct:   243 SGGLEIMKGEEWFCVKPVANTLIVNLGDMMQAISDDEYKSVTHRVKKRNRKTERHSVCYF 302

Query:   291 VFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRF 332
             VFP    VI+SS YK FTYSDF+A+VQ D+++LG K+GL RF
Sbjct:   303 VFPKRDCVIKSSNYKLFTYSDFEAQVQADVQSLGTKIGLPRF 344
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2075656 AT3G47190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036386 GA2OX7 "gibberellin 2-oxidase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127403 GA2OX8 "gibberellin 2-oxidase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085864 AT3G19000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005511 GA20OX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176466 AT5G43450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.7LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-165
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-46
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-39
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 4e-39
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-38
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 4e-38
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-37
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-37
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 8e-37
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-34
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-32
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-32
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-31
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 6e-31
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-29
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-28
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-27
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-27
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 9e-27
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 3e-26
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-25
PLN02997325 PLN02997, PLN02997, flavonol synthase 7e-24
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-20
PLN02904357 PLN02904, PLN02904, oxidoreductase 3e-19
PLN02485329 PLN02485, PLN02485, oxidoreductase 7e-19
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-18
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-14
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-05
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  463 bits (1194), Expect = e-165
 Identities = 198/345 (57%), Positives = 251/345 (72%), Gaps = 15/345 (4%)

Query: 1   MPNLESYPPVFRRKHNDFDP----DESVQDFQECYHSDPVPTLDLGSLNLEKLGDACKNW 56
           M N ESYPP FR   ++       +E           D +P +D+  L++EKL +ACK+W
Sbjct: 1   MSNSESYPPEFRPLMSEIHGPAEGEEGTPVLDRSKDID-IPVIDMECLDMEKLREACKDW 59

Query: 57  GLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLF-TNKPAAVSYFWGTPALTPSGAA 115
           G+FRL +HGIP TLMSQL+  +++L S  FESK+ LF  N P  +SYFWGTPALTPSG A
Sbjct: 60  GIFRLENHGIPLTLMSQLKEISESLLSLPFESKRELFGVNSP--LSYFWGTPALTPSGKA 117

Query: 116 LARAPQ--SINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIF 173
           L+R PQ  ++NWVEGFN+PL+ LS          DP  +SFR+ +EEYGKH++RIA T+F
Sbjct: 118 LSRGPQESNVNWVEGFNIPLSSLSLLQT--LSCSDPKLESFRVLMEEYGKHLTRIAVTLF 175

Query: 174 EAMVRNLHLDST--QSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQ 231
           EA+ + L L+ +  Q  S LSESTG++RVYRYP+ S   EA GMEVHTDSSV+SILN+D+
Sbjct: 176 EAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDE 235

Query: 232 VGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRV-KVNKNEERHSVCYF 290
           VGGLEV KD +W  V+PI  +L+VNLGDMMQ IS+DEY SV HRV K NK +ER+S+CYF
Sbjct: 236 VGGLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYF 295

Query: 291 VFPGEGSVIRSSRYKPFTYSDFQARVQHDIKTLGFKVGLQRFKIS 335
           VFP E  VI+SS+YKPFTYSDF+A+VQ D+KTLG KVGL RFK +
Sbjct: 296 VFPEEDCVIKSSKYKPFTYSDFEAQVQLDVKTLGSKVGLSRFKSN 340

Length = 341
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02947374 oxidoreductase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02997325 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.81
PLN03176120 flavanone-3-hydroxylase; Provisional 99.73
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.65
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.86
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.62
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 93.43
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 81.64
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=2e-76  Score=554.20  Aligned_cols=331  Identities=58%  Similarity=0.946  Sum_probs=275.3

Q ss_pred             CCCCCCCCCceecCCCCCCCCCccc---cccc-cCCCCCCceeeCCCCCHHHHHHHHhccceEEEecCCCCHHHHHHHHH
Q 019643            1 MPNLESYPPVFRRKHNDFDPDESVQ---DFQE-CYHSDPVPTLDLGSLNLEKLGDACKNWGLFRLVSHGIPETLMSQLRS   76 (338)
Q Consensus         1 ~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~-~~~~~~iPvIDl~~l~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~   76 (338)
                      |+|+.|+||.||..- ...+-+-..   ++-. ......||+|||+.+..++|.+||+++|||||+||||+.++++++++
T Consensus         1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~   79 (341)
T PLN02984          1 MSNSESYPPEFRPLM-SEIHGPAEGEEGTPVLDRSKDIDIPVIDMECLDMEKLREACKDWGIFRLENHGIPLTLMSQLKE   79 (341)
T ss_pred             CCCCCCCCCchhhhh-heecCCCCcccccccccCCccCCCCeEeCcHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHH
Confidence            889999999997432 222222110   0000 12245699999999888899999999999999999999999999999


Q ss_pred             HHHHHccCCHHHHhhhhcCCCCCcccccCCCCCCCCccccccCC--CCCCccccccccCCCCCCccccCCCCCCCChhhH
Q 019643           77 QAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAP--QSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSF  154 (338)
Q Consensus        77 ~~~~fF~lP~e~K~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~--~~~d~~E~~~~~~~~~~~~~~~~~~~~~p~~~~f  154 (338)
                      .+++||+||.|+|+++.. ...+.+|++|+..+.+.+.+...+.  ...||+|.|.++.......+.|+  +.|+.+++|
T Consensus        80 ~s~~FF~LP~eeK~k~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~kE~f~~~~~~~~~~~~~p--~~~~~~p~f  156 (341)
T PLN02984         80 ISESLLSLPFESKRELFG-VNSPLSYFWGTPALTPSGKALSRGPQESNVNWVEGFNIPLSSLSLLQTLS--CSDPKLESF  156 (341)
T ss_pred             HHHHHHcCCHHHHhhhcc-cCCCCccccCcccccccccccccccccCCCCeeeEEeCcCCchhhhhhcC--CCCCccHHH
Confidence            999999999999999852 1233445556655554443332221  24699999999754322222232  234667899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CccchhccCCCccceEeeecCCCCCccccCccccccCCCeEEEEecCCC
Q 019643          155 RLSLEEYGKHMSRIARTIFEAMVRNLHLD--STQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQV  232 (338)
Q Consensus       155 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~--~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~d~~  232 (338)
                      |+.+++|+++|.+|+..|+++||++||++  +++|.+++..+.+.||++||||++.++..+|+++|||+|+||||+||++
T Consensus       157 r~~~~~y~~~~~~La~~ll~~lA~~Lgl~~~~~~f~~~~~~~~~~lRl~~YPp~~~~~~~~g~~aHTD~g~lTlL~Qd~v  236 (341)
T PLN02984        157 RVLMEEYGKHLTRIAVTLFEAIAKTLSLELSGDQKMSYLSESTGVIRVYRYPQCSNEAEAPGMEVHTDSSVISILNQDEV  236 (341)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHhcCccceEEEEeCCCCCCcccccCccCccCCCceEEEEeCCC
Confidence            99999999999999999999999999999  8899888888888999999999987777899999999999999999999


Q ss_pred             CceEEEeCCeEEEeccCCCeEEEEcchhhHHHhCCcccccccccc-CCCCCCeEEEEEeeCCCCCccccCCCCCCcCHHH
Q 019643          233 GGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVK-VNKNEERHSVCYFVFPGEGSVIRSSRYKPFTYSD  311 (338)
Q Consensus       233 ~GLqV~~~g~W~~V~p~p~~~vVniGd~l~~~TnG~~kst~HRV~-~~~~~~R~Si~~F~~P~~d~~i~p~~y~~~~~~d  311 (338)
                      +||||+++|+|++|+|.||++|||+||+||+||||+||||+|||+ .+...+||||+||++|+.|++|+|++|+|++++|
T Consensus       237 ~GLQV~~~g~Wv~V~p~pgalVVNiGD~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~d~~i~p~~y~p~t~~e  316 (341)
T PLN02984        237 GGLEVMKDGEWFNVKPIANTLVVNLGDMMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEEDCVIKSSKYKPFTYSD  316 (341)
T ss_pred             CCeeEeeCCceEECCCCCCeEEEECChhhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCCCCEEccCCcCcccHHH
Confidence            999999999999999999999999999999999999999999995 4567789999999999999999999999999999


Q ss_pred             HHHHHHHhhhhcCccccccccccC
Q 019643          312 FQARVQHDIKTLGFKVGLQRFKIS  335 (338)
Q Consensus       312 ~~~~~~~~~~~~g~~~~~~~~~~~  335 (338)
                      |+..+....+.++.+..|++|||+
T Consensus       317 ~l~~~~~~~~~~~~~~~~~~~~~~  340 (341)
T PLN02984        317 FEAQVQLDVKTLGSKVGLSRFKSN  340 (341)
T ss_pred             HHHHHHhhhhccCCcccccceecC
Confidence            999999888888899889999986

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-26
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-26
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-25
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 5e-25
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 5e-13
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 3e-08
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 1e-05
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 2e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 147/295 (49%), Gaps = 28/295 (9%)
Query: 22  ESVQD--FQECYHSDP-VPTLDLGSLN----------LEKLGDACKNWGLFRLVSHGIPE 68
           ES+ D   +E     P VPT+DL ++           +E+L  A  +WG+  L++HGIP 
Sbjct: 30  ESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPA 89
Query: 69  TLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALAR-APQSINWVE 127
            LM +++   +  FS S E K++ + N  A       T  +   G+ LA  A   + W E
Sbjct: 90  DLMERVKKAGEEFFSLSVEEKEK-YANDQA-------TGKIQGYGSKLANNASGQLEW-E 140
Query: 128 GFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQS 187
            +   L    ++       + P    +  +  EY K +  +A  +F+A+   L L+  + 
Sbjct: 141 DYFFHLAYPEEKRDLSIWPKTP--SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRL 198
Query: 188 HSD---LSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVFKDDKWL 244
             +   L E    +++  YPK  + + ALG+E HTD S L+ +  + V GL++F + KW+
Sbjct: 199 EKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWV 258
Query: 245 LVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVI 299
             + +P S+++++GD ++ +SN +Y S+ HR  VNK + R S   F  P +  ++
Sbjct: 259 TAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 313
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 4e-75
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-70
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-57
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-52
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 9e-52
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-50
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  234 bits (599), Expect = 4e-75
 Identities = 78/334 (23%), Positives = 152/334 (45%), Gaps = 34/334 (10%)

Query: 3   NLESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLN----------LEKLGDA 52
            + S P  + R   + +    V   ++      VPT+DL ++           +E+L  A
Sbjct: 14  GIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKA 73

Query: 53  CKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPS 112
             +WG+  L++HGIP  LM +++   +  FS S E K++   ++       +G+  L  +
Sbjct: 74  SLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGS-KLANN 132

Query: 113 GAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIARTI 172
            +        + W + F         R+     +       +  +  EY K +  +A  +
Sbjct: 133 AS------GQLEWEDYFFHLAYPEEKRDLSIWPKTPS---DYIEATSEYAKCLRLLATKV 183

Query: 173 FEAMVRNLHLDS---TQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNE 229
           F+A+   L L+     +    L E    +++  YPK  + + ALG+E HTD S L+ +  
Sbjct: 184 FKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH 243

Query: 230 DQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCY 289
           + V GL++F + KW+  + +P S+++++GD ++ +SN +Y S+ HR  VNK + R S   
Sbjct: 244 NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAV 303

Query: 290 FVFPGEGSVI-----------RSSRYKPFTYSDF 312
           F  P +  ++             +++ P T++  
Sbjct: 304 FCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 337
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.67
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 93.25
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.14
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 90.07
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 89.26
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 81.87
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 80.7
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=4.2e-71  Score=514.93  Aligned_cols=281  Identities=21%  Similarity=0.372  Sum_probs=237.3

Q ss_pred             CCCCceeeCCCCC------HHHHHHHHhccceEEEecCCCCHHHHHHHHHHHHHHccCCHHHHhhhhcCCCCCcccccCC
Q 019643           33 SDPVPTLDLGSLN------LEKLGDACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGT  106 (338)
Q Consensus        33 ~~~iPvIDl~~l~------~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~~G~  106 (338)
                      +.+||||||+.+.      .++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++...    .+.++||
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~----~~~~~Gy   79 (312)
T 3oox_A            4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV----KGGARGY   79 (312)
T ss_dssp             CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS----GGGTSEE
T ss_pred             CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC----CCCcccc
Confidence            5679999999873      35899999999999999999999999999999999999999999999752    2234565


Q ss_pred             CCCCCCccccccCCCCCCccccccccCCCCCC-c-cccCCCCCCC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 019643          107 PALTPSGAALARAPQSINWVEGFNVPLTQLSD-R-NQYFQGQQDP-LFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLD  183 (338)
Q Consensus       107 ~~~~~~g~~~~~~~~~~d~~E~~~~~~~~~~~-~-~~~~~~~~~p-~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~  183 (338)
                      .   +.|.+........||+|.|+++.+.... + .....+|.|| .+|+||+.+++|+++|.+++..|+++||++||++
T Consensus        80 ~---~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~  156 (312)
T 3oox_A           80 I---PFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE  156 (312)
T ss_dssp             E---CCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             c---cccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            3   3344443333457999999987532111 0 0122345566 4789999999999999999999999999999999


Q ss_pred             CccchhccCCCccceEeeecCCCCCccccCccccccCCCeEEEEecCCCCceEEE-eCCeEEEeccCCCeEEEEcchhhH
Q 019643          184 STQSHSDLSESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSILNEDQVGGLEVF-KDDKWLLVQPIPGSLIVNLGDMMQ  262 (338)
Q Consensus       184 ~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~d~~~GLqV~-~~g~W~~V~p~p~~~vVniGd~l~  262 (338)
                      +++|.+.+..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+||
T Consensus       157 ~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~  236 (312)
T 3oox_A          157 RDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE  236 (312)
T ss_dssp             TTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred             HHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence            9999999888889999999999987555599999999999999999999999998 789999999999999999999999


Q ss_pred             HHhCCccccccccccCCC----CCCeEEEEEeeCCCCCccccC----------CCCC-CcCHHHHHHHHHHhh
Q 019643          263 AISNDEYMSVKHRVKVNK----NEERHSVCYFVFPGEGSVIRS----------SRYK-PFTYSDFQARVQHDI  320 (338)
Q Consensus       263 ~~TnG~~kst~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p----------~~y~-~~~~~d~~~~~~~~~  320 (338)
                      +||||+||||+|||+.+.    ..+||||+||++|+.|++|+|          ++|+ ++|++||+..+++++
T Consensus       237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence            999999999999996542    467999999999999999974          6899 999999998877754
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 9e-45
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-37
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-37
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-28
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  154 bits (389), Expect = 9e-45
 Identities = 77/335 (22%), Positives = 149/335 (44%), Gaps = 36/335 (10%)

Query: 3   NLESYPPVFRRKHNDFDPDESVQDFQECYHSDP-VPTLDLGSLN----------LEKLGD 51
            + S P  + R   +     +    +E     P VPT+DL ++           +E+L  
Sbjct: 13  GIISIPKEYIRPKEEL-ESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKK 71

Query: 52  ACKNWGLFRLVSHGIPETLMSQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTP 111
           A  +WG+  L++HGIP  LM +++   +  FS S E K++   ++       +G+     
Sbjct: 72  ASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGS----- 126

Query: 112 SGAALARAPQSINWVEGFNVPLTQLSDRNQYFQGQQDPLFDSFRLSLEEYGKHMSRIART 171
               LA         E +   L    ++       + P    +  +  EY K +  +A  
Sbjct: 127 ---KLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP--SDYIEATSEYAKCLRLLATK 181

Query: 172 IFEAMVRNLHLDSTQSHSDLSESTGLVRVYRYPKFSKADE---ALGMEVHTDSSVLSILN 228
           +F+A+   L L+  +   ++     L+   +   + K  +   ALG+E HTD S L+ + 
Sbjct: 182 VFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 241

Query: 229 EDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVC 288
            + V GL++F + KW+  + +P S+++++GD ++ +SN +Y S+ HR  VNK + R S  
Sbjct: 242 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWA 301

Query: 289 YFVFPGEGSVI-----------RSSRYKPFTYSDF 312
            F  P +  ++             +++ P T++  
Sbjct: 302 VFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 336
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 91.77
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.2e-68  Score=502.55  Aligned_cols=305  Identities=26%  Similarity=0.467  Sum_probs=244.0

Q ss_pred             CCCCCCCCceecCCCCCCCCCccccccccCCCCCCceeeCCCCC----------HHHHHHHHhccceEEEecCCCCHHHH
Q 019643            2 PNLESYPPVFRRKHNDFDPDESVQDFQECYHSDPVPTLDLGSLN----------LEKLGDACKNWGLFRLVSHGIPETLM   71 (338)
Q Consensus         2 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDl~~l~----------~~~l~~A~~~~Gff~l~nhgi~~~~~   71 (338)
                      +.+++||..|+++....+......+.....+..+||||||+.+.          .++|.+||+++|||||+||||+.+++
T Consensus        12 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li   91 (349)
T d1gp6a_          12 SGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLM   91 (349)
T ss_dssp             TTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHH
T ss_pred             CCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHH
Confidence            46899999999874333332222223335667789999999984          24899999999999999999999999


Q ss_pred             HHHHHHHHHHccCCHHHHhhhhcCCCCCcccccCCCCCCCCccccccCCCCCCccccccccC--CCCCCccccCCCCCCC
Q 019643           72 SQLRSQAKNLFSFSFESKQRLFTNKPAAVSYFWGTPALTPSGAALARAPQSINWVEGFNVPL--TQLSDRNQYFQGQQDP  149 (338)
Q Consensus        72 ~~~~~~~~~fF~lP~e~K~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~d~~E~~~~~~--~~~~~~~~~~~~~~~p  149 (338)
                      +++++++++||+||.|+|+++..+  ...+++.||.   ....  .......++.+.+....  ......|.|+     +
T Consensus        92 ~~~~~~~~~FF~lP~eeK~k~~~~--~~~~~~~~~g---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~n~wp-----~  159 (349)
T d1gp6a_          92 ERVKKAGEEFFSLSVEEKEKYAND--QATGKIQGYG---SKLA--NNASGQLEWEDYFFHLAYPEEKRDLSIWP-----K  159 (349)
T ss_dssp             HHHHHHHHHHHTSCHHHHGGGBCB--GGGTBCSEEE---CCCC--CSTTCCCCSCEEEEEEEESGGGCCGGGSC-----C
T ss_pred             HHHHHHHHHHHcCCHHHHhhhhcc--cccCCccccc---cccc--cccccccchhhhhcccccccccccccccc-----c
Confidence            999999999999999999999742  1222222221   1111  11112245554433211  1122233442     2


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchhccC---CCccceEeeecCCCCCccccCccccccCCCeEEE
Q 019643          150 LFDSFRLSLEEYGKHMSRIARTIFEAMVRNLHLDSTQSHSDLS---ESTGLVRVYRYPKFSKADEALGMEVHTDSSVLSI  226 (338)
Q Consensus       150 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTl  226 (338)
                      ..+.|++.+.+|+++|.+++.+|+++++++||+++++|.+.+.   ...+.||++|||+++.....+|+++|||+|+|||
T Consensus       160 ~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTl  239 (349)
T d1gp6a_         160 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF  239 (349)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEE
Confidence            4688999999999999999999999999999999998877763   3456899999999988888999999999999999


Q ss_pred             EecCCCCceEEEeCCeEEEeccCCCeEEEEcchhhHHHhCCccccccccccCCCCCCeEEEEEeeCCCCCccc-cC----
Q 019643          227 LNEDQVGGLEVFKDDKWLLVQPIPGSLIVNLGDMMQAISNDEYMSVKHRVKVNKNEERHSVCYFVFPGEGSVI-RS----  301 (338)
Q Consensus       227 L~~d~~~GLqV~~~g~W~~V~p~p~~~vVniGd~l~~~TnG~~kst~HRV~~~~~~~R~Si~~F~~P~~d~~i-~p----  301 (338)
                      |+|+.++||||+++|+|++|+|.+|++|||+||+|++||||+||||+|||+.+++.+||||+||++|+.|++| +|    
T Consensus       240 L~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~  319 (349)
T d1gp6a_         240 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM  319 (349)
T ss_dssp             EEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred             EeccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHH
Confidence            9999999999999999999999999999999999999999999999999988888999999999999999865 54    


Q ss_pred             ------CCCCCcCHHHHHHHHHH
Q 019643          302 ------SRYKPFTYSDFQARVQH  318 (338)
Q Consensus       302 ------~~y~~~~~~d~~~~~~~  318 (338)
                            .+|+|+|++||++.++.
T Consensus       320 v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         320 VSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             CCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             cCCCCCCCCCCccHHHHHHHHHh
Confidence                  59999999999998664
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure