Citrus Sinensis ID: 019665

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN
ccHHHHHccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEEEcccccccccccccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEcccccccccccccccccccHHHHHHHHHHcccccccHHHcccc
ccHHHHHHHcccccccHHcEcccccccccccccccccccEEEcccccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEEEEccccccHHHHEEEEccccHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEcccccccccccEEEEcccccEEEEEEccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEEccHHHcccccccccccccHHHHHHHHHHcccHHHHHHHHHcc
mdtkvlssgirytnlpegyvrpeserpnlsevsecknvpvidlacddrSLIVQQVADACKNygffqainhevplETVERVLEVAKEFFnlpveeklklysddpsktmrlstsfnvnkekvhnwRDYLRlhcypldkyvpewpsnpstfKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLgeqgqhmavnfyppcpepeltyglpghtdpnALTILLQDLEVAglqvlkddkwvavnplpnafvINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASflcpnndamisppkaltedgsgavyrdfTYAEYYSKfwsrnldqeHCLELFKN
mdtkvlssgirytnlpegyvrpeserpnlsevsecKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEffnlpveeklklysddpsktmrlstsfnvnkekvhnWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN
MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN
*********************************ECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLY***********TSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMI*****LTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLEL***
*D*KVL*SGIRYTNLPEGYVRPES**********CKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLK****D*SKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLE*FK*
MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN
***KVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query337 2.2.26 [Sep-21-2011]
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.985 0.902 0.349 9e-59
Q06942364 Naringenin,2-oxoglutarate N/A no 0.976 0.903 0.352 1e-57
Q05965357 Naringenin,2-oxoglutarate N/A no 0.949 0.896 0.357 6e-57
Q9S818358 Naringenin,2-oxoglutarate no no 0.949 0.893 0.354 1e-55
Q0WPW4307 1-aminocyclopropane-1-car no no 0.801 0.879 0.419 3e-55
Q05963356 Naringenin,2-oxoglutarate N/A no 0.937 0.887 0.350 5e-55
Q07353369 Naringenin,2-oxoglutarate N/A no 0.922 0.842 0.360 7e-55
P28038377 Naringenin,2-oxoglutarate N/A no 0.908 0.811 0.371 7e-55
Q05964365 Naringenin,2-oxoglutarate N/A no 0.952 0.879 0.351 1e-54
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.905 0.835 0.341 2e-54
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function desciption
 Score =  227 bits (579), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 195/346 (56%), Gaps = 14/346 (4%)

Query: 1   MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLA------CDDRSLIVQQ 54
           M    L++  +   L   +VR E ERP ++       +PVI LA       D RS I ++
Sbjct: 1   MAPSTLTALAQEKTLNSKFVRDEDERPKIAYNKFSDEIPVISLAGIDDDSVDKRSQICRK 60

Query: 55  VADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFN 114
           + +AC+++G FQ ++H + ++ +  +  +A++FF LP EEKL+ +     K      S +
Sbjct: 61  IVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLR-FDMTGGKKGGFIVSSH 119

Query: 115 VNKEKVHNWRDYLRLHCYPLD-KYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISES 173
           +  E V +WR+ +    YP+  +    WP  P  ++     Y  E+  L  ++LE++SE+
Sbjct: 120 LQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEA 179

Query: 174 LGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVL 233
           +GLEK+ + K   +  Q + VN+YP CP+P LT GL  HTDP  +T+LLQD +V GLQ  
Sbjct: 180 MGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQD-QVGGLQAT 238

Query: 234 KD--DKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNND 291
           +D    W+ V P+  AFV+N+GD    LSNGR+K+  H+A+VN+  +RMS+A+F  P  +
Sbjct: 239 RDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPN 298

Query: 292 AMISPPKALTEDGSGAVYRD-FTYAEYYSKFWSRNLDQEHCLELFK 336
           A + P K    +G  AV  +  T+AE Y +  SR+++     +L K
Sbjct: 299 ATVYPLK--IREGEKAVMEEPITFAEMYKRKMSRDIEMATLKKLAK 342
Involved in the conversion of (2S)-naringenin to (+)-(2R/3R)-dihydrokaempferol.
Petroselinum crispum (taxid: 4043)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 9
>sp|Q06942|FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description
>sp|Q0WPW4|ACCO5_ARATH 1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1 Back     alignment and function description
>sp|P28038|FL3H_HORVU Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
224121108338 predicted protein [Populus trichocarpa] 1.0 0.997 0.827 1e-167
224132566338 predicted protein [Populus trichocarpa] 1.0 0.997 0.828 1e-166
356509147338 PREDICTED: flavanone 3-dioxygenase-like 1.0 0.997 0.789 1e-160
255566902337 1-aminocyclopropane-1-carboxylate oxidas 1.0 1.0 0.786 1e-160
225465379337 PREDICTED: flavanone 3-dioxygenase [Viti 1.0 1.0 0.762 1e-159
147832735337 hypothetical protein VITISV_009059 [Viti 1.0 1.0 0.762 1e-158
357464227338 1-aminocyclopropane-1-carboxylate oxidas 1.0 0.997 0.774 1e-158
356516162338 PREDICTED: flavanone 3-dioxygenase-like 1.0 0.997 0.780 1e-157
359490759338 PREDICTED: flavanone 3-dioxygenase-like 1.0 0.997 0.754 1e-156
350540006337 flavonoid biosynthesis oxidoreductase pr 1.0 1.0 0.744 1e-155
>gi|224121108|ref|XP_002318498.1| predicted protein [Populus trichocarpa] gi|222859171|gb|EEE96718.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 279/337 (82%), Positives = 304/337 (90%)

Query: 1   MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACK 60
           MDTKVLSSGI+YTNLP  YVRPESERP L EVS C+NVPVIDL C +R  IVQQV DACK
Sbjct: 1   MDTKVLSSGIQYTNLPASYVRPESERPRLWEVSTCENVPVIDLGCQERDQIVQQVGDACK 60

Query: 61  NYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKV 120
           NYGFFQ INH V LE VE++L VA +FF+LPVEEKLKLYSDDPSKTMRLSTSFNVNKEKV
Sbjct: 61  NYGFFQVINHGVSLEAVEKMLGVAHDFFSLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKV 120

Query: 121 HNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDY 180
           HNWRDYLRLHCYPLDKY PEWPS P  FK+ VS+YC +VR LG+R+ ELISESLGLEKD+
Sbjct: 121 HNWRDYLRLHCYPLDKYAPEWPSKPPPFKDIVSSYCIQVRELGFRIQELISESLGLEKDH 180

Query: 181 IKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVA 240
           +K VLGEQGQHMAVNFYPPCPEPELT+GLPGHTDPNALTILLQD  VAGLQVLKD KWVA
Sbjct: 181 VKNVLGEQGQHMAVNFYPPCPEPELTFGLPGHTDPNALTILLQDQSVAGLQVLKDGKWVA 240

Query: 241 VNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKAL 300
           V+P P+AFVINIGDQLQALSNGRYKSVWHRAI N +KARMSVASFLCP ++A+I+PPKAL
Sbjct: 241 VDPHPDAFVINIGDQLQALSNGRYKSVWHRAITNTDKARMSVASFLCPYDNALITPPKAL 300

Query: 301 TEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN 337
           T+DG+GAVYRDFTYAEYY KFWSR+LDQEHCLELFKN
Sbjct: 301 TDDGTGAVYRDFTYAEYYKKFWSRDLDQEHCLELFKN 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224132566|ref|XP_002321354.1| predicted protein [Populus trichocarpa] gi|222868350|gb|EEF05481.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356509147|ref|XP_003523313.1| PREDICTED: flavanone 3-dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|255566902|ref|XP_002524434.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] gi|223536318|gb|EEF37969.1| 1-aminocyclopropane-1-carboxylate oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225465379|ref|XP_002273640.1| PREDICTED: flavanone 3-dioxygenase [Vitis vinifera] gi|296085426|emb|CBI29158.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147832735|emb|CAN63747.1| hypothetical protein VITISV_009059 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357464227|ref|XP_003602395.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] gi|355491443|gb|AES72646.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356516162|ref|XP_003526765.1| PREDICTED: flavanone 3-dioxygenase-like [Glycine max] Back     alignment and taxonomy information
>gi|359490759|ref|XP_003634159.1| PREDICTED: flavanone 3-dioxygenase-like [Vitis vinifera] gi|147805936|emb|CAN76696.1| hypothetical protein VITISV_035675 [Vitis vinifera] gi|302143989|emb|CBI23094.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|350540006|ref|NP_001233840.1| flavonoid biosynthesis oxidoreductase protein [Solanum lycopersicum] gi|307159104|gb|ADN39436.1| flavonoid biosynthesis oxidoreductase protein [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
TAIR|locus:2153924341 DMR6 "DOWNY MILDEW RESISTANT 6 1.0 0.988 0.685 6.6e-129
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.988 0.954 0.552 2.3e-101
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.988 0.956 0.532 8.2e-99
TAIR|locus:2040575366 AT2G36690 [Arabidopsis thalian 0.949 0.874 0.416 2e-65
TAIR|locus:2042356357 AT2G44800 [Arabidopsis thalian 0.964 0.910 0.402 1.4e-62
TAIR|locus:2081962357 AT3G60290 [Arabidopsis thalian 0.946 0.893 0.394 2.7e-59
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.946 0.876 0.388 1.5e-58
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.902 0.819 0.396 2.5e-58
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.896 0.831 0.389 2.8e-57
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.899 0.858 0.405 2e-56
TAIR|locus:2153924 DMR6 "DOWNY MILDEW RESISTANT 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
 Identities = 233/340 (68%), Positives = 278/340 (81%)

Query:     1 MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACK 60
             M  K++S+G R+T LPE YVRP S+RP LSEVS+ ++ P+IDL+  DRS ++QQ+  AC 
Sbjct:     1 MAAKLISTGFRHTTLPENYVRPISDRPRLSEVSQLEDFPLIDLSSTDRSFLIQQIHQACA 60

Query:    61 NYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKV 120
              +GFFQ INH V  + ++ ++ VA+EFF++ +EEK+KLYSDDP+KT RLSTSFNV KE+V
Sbjct:    61 RFGFFQVINHGVNKQIIDEMVSVAREFFSMSMEEKMKLYSDDPTKTTRLSTSFNVKKEEV 120

Query:   121 HNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDY 180
             +NWRDYLRLHCYP+ KYV EWPSNP +FKE VS Y  EVR +G+++ ELISESLGLEKDY
Sbjct:   121 NNWRDYLRLHCYPIHKYVNEWPSNPPSFKEIVSKYSREVREVGFKIEELISESLGLEKDY 180

Query:   181 IKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVA 240
             +KKVLGEQGQHMAVN+YPPCPEPELTYGLP HTDPNALTILLQD  V GLQ+L D +W A
Sbjct:   181 MKKVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDTTVCGLQILIDGQWFA 240

Query:   241 VNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKAL 300
             VNP P+AFVINIGDQLQALSNG YKSVWHRA+ N E  R+SVASFLCP + A++SP K L
Sbjct:   241 VNPHPDAFVINIGDQLQALSNGVYKSVWHRAVTNTENPRLSVASFLCPADCAVMSPAKPL 300

Query:   301 TE---DGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN 337
              E   D +  VY+DFTYAEYY KFWSRNLDQEHCLE F N
Sbjct:   301 WEAEDDETKPVYKDFTYAEYYKKFWSRNLDQEHCLENFLN 340
GO:0005737 "cytoplasm" evidence=ISM
GO:0009813 "flavonoid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009617 "response to bacterium" evidence=IGI;RCA
GO:0009620 "response to fungus" evidence=IEP;IGI
GO:0000165 "MAPK cascade" evidence=RCA
GO:0001666 "response to hypoxia" evidence=RCA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0009595 "detection of biotic stimulus" evidence=RCA
GO:0009627 "systemic acquired resistance" evidence=RCA
GO:0009697 "salicylic acid biosynthetic process" evidence=RCA
GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0031347 "regulation of defense response" evidence=RCA
GO:0031348 "negative regulation of defense response" evidence=RCA
GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA
GO:0042742 "defense response to bacterium" evidence=RCA
GO:0043900 "regulation of multi-organism process" evidence=RCA
GO:0045087 "innate immune response" evidence=RCA
GO:0050832 "defense response to fungus" evidence=RCA
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040575 AT2G36690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042356 AT2G44800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081962 AT3G60290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
3rd Layer1.14.11.13LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 0.0
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-151
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-102
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 6e-98
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-87
PLN02904357 PLN02904, PLN02904, oxidoreductase 3e-86
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-81
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-77
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-74
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-73
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 9e-73
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 9e-69
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 7e-63
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-63
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-60
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-55
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-52
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-52
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-48
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-48
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-44
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 7e-42
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-37
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-36
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-34
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 6e-32
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-24
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-12
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  686 bits (1773), Expect = 0.0
 Identities = 275/337 (81%), Positives = 298/337 (88%)

Query: 1   MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACK 60
           M TK+LS+GIR+T LPE YVRPESERP LSEVS C+NVPVIDL   DR+ +VQQ+ DAC+
Sbjct: 1   MATKLLSTGIRHTTLPESYVRPESERPRLSEVSTCENVPVIDLGSPDRAQVVQQIGDACR 60

Query: 61  NYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKV 120
            YGFFQ INH V  E VE++L VA EFF LPVEEK+KLYSDDP+KTMRLSTSFNV KEKV
Sbjct: 61  RYGFFQVINHGVSAELVEKMLAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKV 120

Query: 121 HNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDY 180
           HNWRDYLRLHCYPLDKYVPEWPSNP +FKE VSTYC EVR LG+R+ E ISESLGLEKDY
Sbjct: 121 HNWRDYLRLHCYPLDKYVPEWPSNPPSFKEIVSTYCREVRELGFRLQEAISESLGLEKDY 180

Query: 181 IKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVA 240
           IK VLGEQGQHMAVN+YPPCPEPELTYGLP HTDPNALTILLQD +VAGLQVLKD KWVA
Sbjct: 181 IKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVA 240

Query: 241 VNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKAL 300
           VNP P AFVINIGDQLQALSNGRYKSVWHRA+VN +K RMSVASFLCP +DA+ISP K L
Sbjct: 241 VNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKL 300

Query: 301 TEDGSGAVYRDFTYAEYYSKFWSRNLDQEHCLELFKN 337
           T+DG+ AVYRDFTYAEYY KFWSRNLDQEHCLELFKN
Sbjct: 301 TDDGTAAVYRDFTYAEYYKKFWSRNLDQEHCLELFKN 337

Length = 337
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 337
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.85
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.52
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.96
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.5
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.18
TIGR02466201 conserved hypothetical protein. This family consis 84.16
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 83.61
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=1.2e-80  Score=578.97  Aligned_cols=337  Identities=82%  Similarity=1.338  Sum_probs=299.4

Q ss_pred             CcHhHhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHH
Q 019665            1 MDTKVLSSGIRYTNLPEGYVRPESERPNLSEVSECKNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERV   80 (337)
Q Consensus         1 ~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~   80 (337)
                      |-.+|++.|++..+||+.|++|+.++|........++||||||+..++++++++|.+||+++|||||+||||+.++++++
T Consensus         1 ~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~~~~~~~~~l~~Ac~~~GFf~v~nHGI~~~l~~~~   80 (337)
T PLN02639          1 MATKLLSTGIRHTTLPESYVRPESERPRLSEVSTCENVPVIDLGSPDRAQVVQQIGDACRRYGFFQVINHGVSAELVEKM   80 (337)
T ss_pred             CchhhhhhcCCcCcCCHHhcCCchhcccccccccCCCCCeEECCCccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHH
Confidence            67889999999999999999999888743222245789999999667888999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCHHHHchhcCCCCCCCCCCCCccccCCcccccceecccccccCCCCCCCCCCCCCCchHHHHHHHHHHHH
Q 019665           81 LEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVR  160 (337)
Q Consensus        81 ~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~  160 (337)
                      ++.+++||+||.|+|+++....+....+|+.......+...+|+|.+.+...|....+|.||+.++.|++.+++|++.|.
T Consensus        81 ~~~~~~fF~LP~e~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~n~wP~~~~~fr~~~~~y~~~~~  160 (337)
T PLN02639         81 LAVAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKVHNWRDYLRLHCYPLDKYVPEWPSNPPSFKEIVSTYCREVR  160 (337)
T ss_pred             HHHHHHHhcCCHHHHhhhhccCCCCccccccccccccCcccCchheEEeeecCCcccchhCcccchHHHHHHHHHHHHHH
Confidence            99999999999999999865533322233222223334567899998876555543458999888899999999999999


Q ss_pred             HHHHHHHHHHHHhcCCChHHHHhhhcCCCceeeeeecCCCCCCCCcccccCccCCCceEEEecCCCCCceEEeeCCeeEE
Q 019665          161 GLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVA  240 (337)
Q Consensus       161 ~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~GLqV~~~~~W~~  240 (337)
                      +++.+|+++|+++||+++++|.+.+..+.+.||++|||+++.++..+|+++|||+|+||||+|+.+++||||+.+|+|++
T Consensus       161 ~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~qd~~v~GLQV~~~g~Wi~  240 (337)
T PLN02639        161 ELGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYPPCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVA  240 (337)
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHhCCCccEEEEEcCCCCCCcccccCCCCCcCCCceEEEEecCCcCceEeecCCeEEe
Confidence            99999999999999999999999888888899999999998887889999999999999999972389999999999999


Q ss_pred             ccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCeEEEEeeeCCCCCceeeCCCCccCCCCCCCCCCcCHHHHHHH
Q 019665          241 VNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSK  320 (337)
Q Consensus       241 v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~~~~~~e~~~~  320 (337)
                      |+|.||++|||+||+|++||||+|||++|||+.++.++||||+||++|+.|++|+|+++++++++|++|++++++||+..
T Consensus       241 V~p~pg~lVVNiGD~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~  320 (337)
T PLN02639        241 VNPHPGAFVINIGDQLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCDDAVISPAKKLTDDGTAAVYRDFTYAEYYKK  320 (337)
T ss_pred             ccCCCCeEEEechhHHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCCCceEeCchHHcCCCCCCCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999887789999999999999999999999999999999999999999999


Q ss_pred             HHhccCCCccccccccC
Q 019665          321 FWSRNLDQEHCLELFKN  337 (337)
Q Consensus       321 ~~~~~~~~~~~~~~~~~  337 (337)
                      ++.+...+++.+++|++
T Consensus       321 ~~~~~~~~~~~l~~~~~  337 (337)
T PLN02639        321 FWSRNLDQEHCLELFKN  337 (337)
T ss_pred             HHhccCCCchhhHhhcC
Confidence            99999999999999875

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-48
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-48
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-46
1w9y_A319 The Structure Of Acc Oxidase Length = 319 9e-44
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-23
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-12
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-12
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 4e-11
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (476), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 20/307 (6%)
Query: 8   SGIRYTNLPEGYVRPESERPNLSEV------SECKNVPVIDLA---CDD---RSLIVQQV 55
           SGI   ++P+ Y+RP+ E  ++++V       +   VP IDL     DD   R   ++++
Sbjct: 12  SGI--ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEEL 69
Query: 56  ADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPS-KTMRLSTSFN 114
             A  ++G    INH +P + +ERV +  +EFF+L VEEK K  +D  + K     +   
Sbjct: 70  KKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLA 129
Query: 115 VNKEKVHNWRDYLRLHCYPLDKY-VPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISES 173
            N      W DY     YP +K  +  WP  PS + E  S Y   +R L  +V + +S  
Sbjct: 130 NNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 189
Query: 174 LGLEKDYIKKVLG---EQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGL 230
           LGLE D ++K +G   E    M +N+YP CP+PEL  G+  HTD +ALT +L ++ V GL
Sbjct: 190 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM-VPGL 248
Query: 231 QVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNN 290
           Q+  + KWV    +P++ V++IGD L+ LSNG+YKS+ HR +VN EK R+S A F  P  
Sbjct: 249 QLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK 308
Query: 291 DAMISPP 297
           D ++  P
Sbjct: 309 DKIVLKP 315
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-158
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-150
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-104
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-96
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-93
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-89
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  445 bits (1147), Expect = e-158
 Identities = 115/341 (33%), Positives = 181/341 (53%), Gaps = 22/341 (6%)

Query: 7   SSGIRYTNLPEGYVRPESERPNLSEV------SECKNVPVIDLA------CDDRSLIVQQ 54
            SGI   ++P+ Y+RP+ E  ++++V       +   VP IDL          R   +++
Sbjct: 12  KSGI--ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEE 69

Query: 55  VADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRL-STSF 113
           +  A  ++G    INH +P + +ERV +  +EFF+L VEEK K  +D  +  ++   +  
Sbjct: 70  LKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKL 129

Query: 114 NVNKEKVHNWRDYLRLHCYPLDKYVPE-WPSNPSTFKEFVSTYCSEVRGLGYRVLELISE 172
             N      W DY     YP +K     WP  PS + E  S Y   +R L  +V + +S 
Sbjct: 130 ANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSV 189

Query: 173 SLGLEKDYIKKVLG---EQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAG 229
            LGLE D ++K +G   E    M +N+YP CP+PEL  G+  HTD +ALT +L +  V G
Sbjct: 190 GLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPG 248

Query: 230 LQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPN 289
           LQ+  + KWV    +P++ V++IGD L+ LSNG+YKS+ HR +VN EK R+S A F  P 
Sbjct: 249 LQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308

Query: 290 NDAM-ISPPKALTEDGSGAVYRDFTYAEYYS-KFWSRNLDQ 328
            D + + P   +    S A +   T+A++   K + +  ++
Sbjct: 309 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 349
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.62
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 94.9
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.66
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 87.68
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 87.43
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.84
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 85.31
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=6.6e-80  Score=577.84  Aligned_cols=329  Identities=35%  Similarity=0.604  Sum_probs=292.3

Q ss_pred             cHhHhhcCCCCCCCCCCCCCCCCCCCCCCC---CC---CCCCCcEEeCCC--c----chHHHHHHHHHHHHHcCeEEEEe
Q 019665            2 DTKVLSSGIRYTNLPEGYVRPESERPNLSE---VS---ECKNVPVIDLAC--D----DRSLIVQQVADACKNYGFFQAIN   69 (337)
Q Consensus         2 ~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~---~~---~~~~iPvIDls~--~----~~~~~~~~L~~A~~~~Gff~l~n   69 (337)
                      |+.|+++|+  ++||++|++|+.+++....   ..   ....||||||+.  .    .+.+++++|.+||+++|||||+|
T Consensus         7 v~~l~~~~~--~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n   84 (356)
T 1gp6_A            7 VESLAKSGI--ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   84 (356)
T ss_dssp             HHHHHHTTC--SSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             HHHHHhcCC--CCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence            788999998  8999999999888875332   10   024799999982  1    25668999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCC-CCCCCCCCccccCCcccccceecccccccCCC-CCCCCCCCCCCc
Q 019665           70 HEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDP-SKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLD-KYVPEWPSNPST  147 (337)
Q Consensus        70 hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~~~~~  147 (337)
                      |||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.+...|.. ..+|.||+.++.
T Consensus        85 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~  164 (356)
T 1gp6_A           85 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSD  164 (356)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTT
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchh
Confidence            9999999999999999999999999999987654 46789965444444567899999999865542 234899999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHhhhc---CCCceeeeeecCCCCCCCCcccccCccCCCceEEEecC
Q 019665          148 FKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLG---EQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQD  224 (337)
Q Consensus       148 fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~~  224 (337)
                      ||+.+++|++.|.+++.+|+++|+++||+++++|.+.+.   .+.+.||++|||+++.++..+|+++|||+|+||||+||
T Consensus       165 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd  244 (356)
T 1gp6_A          165 YIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN  244 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEc
Confidence            999999999999999999999999999999999999887   47789999999999988888999999999999999999


Q ss_pred             CCCCceEEeeCCeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCeEEEEeeeCCCCCc-eeeCCCCccCC
Q 019665          225 LEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDA-MISPPKALTED  303 (337)
Q Consensus       225 ~~~~GLqV~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~~~~~~  303 (337)
                       .++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.++.++|||++||++|+.|+ +|+|+++++++
T Consensus       245 -~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~  323 (356)
T 1gp6_A          245 -MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  323 (356)
T ss_dssp             -SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             -CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCC
Confidence             8999999999999999999999999999999999999999999999998888999999999999999 99999999999


Q ss_pred             CCCCCCCCcCHHHHHHHHHhccCCCccccc
Q 019665          304 GSGAVYRDFTYAEYYSKFWSRNLDQEHCLE  333 (337)
Q Consensus       304 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  333 (337)
                      ++|++|+++|++||+..++++.++++...+
T Consensus       324 ~~p~~y~~~t~~eyl~~~~~~~~d~~~~~~  353 (356)
T 1gp6_A          324 ESPAKFPPRTFAQHIEHKLFGKEQEELVSE  353 (356)
T ss_dssp             SSCCSSCCEEHHHHHHHHHHHHHHHHC---
T ss_pred             CCCccCCCccHHHHHHHHHHhccCcchhhh
Confidence            899999999999999999998887765544
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 337
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-73
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-70
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-62
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-46
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  228 bits (581), Expect = 3e-73
 Identities = 114/341 (33%), Positives = 181/341 (53%), Gaps = 22/341 (6%)

Query: 7   SSGIRYTNLPEGYVRPESERPNLSEVSECK------NVPVIDLA------CDDRSLIVQQ 54
            SGI   ++P+ Y+RP+ E  ++++V   +       VP IDL          R   +++
Sbjct: 11  KSGI--ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEE 68

Query: 55  VADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMR-LSTSF 113
           +  A  ++G    INH +P + +ERV +  +EFF+L VEEK K  +D  +  ++   +  
Sbjct: 69  LKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKL 128

Query: 114 NVNKEKVHNWRDYLRLHCYPLDKYVPE-WPSNPSTFKEFVSTYCSEVRGLGYRVLELISE 172
             N      W DY     YP +K     WP  PS + E  S Y   +R L  +V + +S 
Sbjct: 129 ANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSV 188

Query: 173 SLGLEKDYIKKVLGEQGQH---MAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAG 229
            LGLE D ++K +G   +    M +N+YP CP+PEL  G+  HTD +ALT +L +  V G
Sbjct: 189 GLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPG 247

Query: 230 LQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPN 289
           LQ+  + KWV    +P++ V++IGD L+ LSNG+YKS+ HR +VN EK R+S A F  P 
Sbjct: 248 LQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPP 307

Query: 290 NDAMI-SPPKALTEDGSGAVYRDFTYAEYY-SKFWSRNLDQ 328
            D ++  P   +    S A +   T+A++   K + +  ++
Sbjct: 308 KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 348
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.93
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 88.94
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.5e-76  Score=549.75  Aligned_cols=319  Identities=35%  Similarity=0.620  Sum_probs=277.0

Q ss_pred             cHhHhhcCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCcEEeCC--C----cchHHHHHHHHHHHHHcCeEEEEe
Q 019665            2 DTKVLSSGIRYTNLPEGYVRPESERPNLS------EVSECKNVPVIDLA--C----DDRSLIVQQVADACKNYGFFQAIN   69 (337)
Q Consensus         2 ~~~~~~~~~~~~~~p~~~~~p~~~~~~~~------~~~~~~~iPvIDls--~----~~~~~~~~~L~~A~~~~Gff~l~n   69 (337)
                      |++|+++|+  ++||+.|++|+.+++...      ...+..+||||||+  .    ..+++++++|.+||+++|||||+|
T Consensus         6 ~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           6 VESLAKSGI--ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             HHHHHHTTC--SSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             hHHHHhCCC--ccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            789999999  999999999999988542      11246789999998  1    235678999999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCCC-CCCCCCCccccCCcccccceecccccccCCC-CCCCCCCCCCCc
Q 019665           70 HEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPS-KTMRLSTSFNVNKEKVHNWRDYLRLHCYPLD-KYVPEWPSNPST  147 (337)
Q Consensus        70 hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~-~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~~~~~  147 (337)
                      |||+.++++++++++++||++|.|+|+++...... .+.||+........+..++.+.+.....+.. ..+|.||+..+.
T Consensus        84 HGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~~  163 (349)
T d1gp6a_          84 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSD  163 (349)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTT
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccch
Confidence            99999999999999999999999999999766433 3344444433334444555555443322222 234899999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHhhhc---CCCceeeeeecCCCCCCCCcccccCccCCCceEEEecC
Q 019665          148 FKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLG---EQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQD  224 (337)
Q Consensus       148 fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~~  224 (337)
                      |++.+++|+++|.+++.+|+++++++||+++++|.+.+.   .+.+.||++|||+++.+...+|+++|||+|+||||+|+
T Consensus       164 f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~  243 (349)
T d1gp6a_         164 YIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN  243 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEecc
Confidence            999999999999999999999999999999999998764   35678999999999988889999999999999999999


Q ss_pred             CCCCceEEeeCCeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCeEEEEeeeCCCCCcee-eCCCCccCC
Q 019665          225 LEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMI-SPPKALTED  303 (337)
Q Consensus       225 ~~~~GLqV~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i-~pl~~~~~~  303 (337)
                       .++||||+++|+|++|+|.+|++|||+||+||+||||+||||+|||+.+++++||||+||++|+.|++| +|+|+|+++
T Consensus       244 -~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~  322 (349)
T d1gp6a_         244 -MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV  322 (349)
T ss_dssp             -SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred             -CCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCC
Confidence             999999999999999999999999999999999999999999999999888899999999999999865 899999999


Q ss_pred             CCCCCCCCcCHHHHHHHHHh
Q 019665          304 GSGAVYRDFTYAEYYSKFWS  323 (337)
Q Consensus       304 ~~~~~~~~~~~~e~~~~~~~  323 (337)
                      ++|++|+++|++||++.|+.
T Consensus       323 ~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         323 ESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             SSCCSSCCEEHHHHHHHHHH
T ss_pred             CCCCCCCCccHHHHHHHHHh
Confidence            99999999999999999884
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure