Citrus Sinensis ID: 019690
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 337 | ||||||
| 359490779 | 397 | PREDICTED: uncharacterized protein LOC10 | 0.890 | 0.755 | 0.514 | 6e-84 | |
| 449459184 | 391 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.838 | 0.426 | 3e-64 | |
| 224121130 | 187 | predicted protein [Populus trichocarpa] | 0.459 | 0.828 | 0.748 | 7e-63 | |
| 218190056 | 342 | hypothetical protein OsI_05847 [Oryza sa | 0.908 | 0.894 | 0.425 | 2e-60 | |
| 115444213 | 342 | Os02g0147700 [Oryza sativa Japonica Grou | 0.908 | 0.894 | 0.422 | 1e-59 | |
| 218189675 | 473 | hypothetical protein OsI_05068 [Oryza sa | 0.905 | 0.644 | 0.429 | 2e-57 | |
| 195625200 | 364 | hypothetical protein [Zea mays] gi|41393 | 0.887 | 0.821 | 0.422 | 1e-56 | |
| 147811095 | 693 | hypothetical protein VITISV_037245 [Viti | 0.795 | 0.386 | 0.416 | 2e-56 | |
| 356507532 | 380 | PREDICTED: uncharacterized protein LOC10 | 0.545 | 0.484 | 0.592 | 4e-56 | |
| 357464307 | 416 | DNA-binding protein BIN4 [Medicago trunc | 0.540 | 0.437 | 0.606 | 4e-56 |
| >gi|359490779|ref|XP_002269798.2| PREDICTED: uncharacterized protein LOC100252112 [Vitis vinifera] gi|302144012|emb|CBI23117.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 233/369 (63%), Gaps = 69/369 (18%)
Query: 1 MSGSREESPDWLRSFQAPTHSVLTLSSDSDS-------------DSSHN----------- 36
M SREESPDWL FQAPT S LTLSSDSDS DS N
Sbjct: 1 MGSSREESPDWLHCFQAPTRSALTLSSDSDSPPEDSPLREDKDADSPFNETSKAKSPRKR 60
Query: 37 -------------------GNGDGGKNIAELTFEKHMEPFAPKSSILASSSDSESCQNSS 77
G+ G+ A + EP AP S+ SSDSESC ++S
Sbjct: 61 LKAEDPKSTKKQKVNNHKKKEGNEGRKKASVEKPSDGEPNAPNHSVWKLSSDSESCPDNS 120
Query: 78 LLREE----------KAFQFQEKEMDEDAALTGREEKTSVKKVSKEKSPKKGLKSPKKEK 127
+RE+ K QF +KE +DA L+ +++ + + SKEKSPKK +K +
Sbjct: 121 SMREDYIHHEESSVHKTTQFPDKE--KDAVLSENGQESLLNEASKEKSPKKRVKV----E 174
Query: 128 DVINNVKRKGNND-----HEDA----EEDIAEKRSMLNVSTSTLPLVMSEKLQRTKALVE 178
D I++ K+K N+D H+D EE+ ++K + VS S LPLV+SEK+ R+KALVE
Sbjct: 175 DHISSKKKKANSDMKGKGHDDGTELLEEEASDKHTEPQVS-SGLPLVLSEKVHRSKALVE 233
Query: 179 CEGESVDLSGDMGAVGRILVPGTAEGNHEMFLDLKGTIYKTTLVPSRTFCIVSFGHSEAK 238
CEGES+DLSGDMGAVGRI++ T NHEMFLDLKGTIYKTT+VPSRTFCIVSFG SEAK
Sbjct: 234 CEGESIDLSGDMGAVGRIVILDTPSRNHEMFLDLKGTIYKTTIVPSRTFCIVSFGQSEAK 293
Query: 239 IEAIMNDFIQLKPQSNVYEAETMVEGTLDGFLFDSEDESDKLAKAMPHQIDQNDGIEEQT 298
+EA+MNDFIQLKPQSNVYEAETMVEG L+GF FDS+DE+DK+ KA Q DQN+G EEQT
Sbjct: 294 VEAVMNDFIQLKPQSNVYEAETMVEGILEGFSFDSDDEADKMPKASTRQTDQNEGDEEQT 353
Query: 299 NEKTKVKSQ 307
N KTK K++
Sbjct: 354 NGKTKGKAE 362
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449459184|ref|XP_004147326.1| PREDICTED: uncharacterized protein LOC101208657 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224121130|ref|XP_002318505.1| predicted protein [Populus trichocarpa] gi|222859178|gb|EEE96725.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|218190056|gb|EEC72483.1| hypothetical protein OsI_05847 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|115444213|ref|NP_001045886.1| Os02g0147700 [Oryza sativa Japonica Group] gi|113535417|dbj|BAF07800.1| Os02g0147700 [Oryza sativa Japonica Group] gi|215765268|dbj|BAG86965.1| unnamed protein product [Oryza sativa Japonica Group] gi|222622166|gb|EEE56298.1| hypothetical protein OsJ_05371 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|218189675|gb|EEC72102.1| hypothetical protein OsI_05068 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|195625200|gb|ACG34430.1| hypothetical protein [Zea mays] gi|413935593|gb|AFW70144.1| hypothetical protein ZEAMMB73_185491 [Zea mays] | Back alignment and taxonomy information |
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| >gi|147811095|emb|CAN76881.1| hypothetical protein VITISV_037245 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356507532|ref|XP_003522518.1| PREDICTED: uncharacterized protein LOC100795660 [Glycine max] | Back alignment and taxonomy information |
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| >gi|357464307|ref|XP_003602435.1| DNA-binding protein BIN4 [Medicago truncatula] gi|355491483|gb|AES72686.1| DNA-binding protein BIN4 [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 337 | ||||||
| TAIR|locus:2153939 | 454 | BIN4 "AT5G24630" [Arabidopsis | 0.436 | 0.323 | 0.68 | 3.8e-56 |
| TAIR|locus:2153939 BIN4 "AT5G24630" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 515 (186.3 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 102/150 (68%), Positives = 125/150 (83%)
Query: 158 STSTLPLVMSEKLQRTKALVECEGESVDLSGDMGAVGRILVPGTAEGNHEMFLDLKGTIY 217
S+S LPLV+SEK+ RTK LVECEG+S+DLSGDMGAVGR++V T G +M+LDLKGTIY
Sbjct: 271 SSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-G--DMYLDLKGTIY 327
Query: 218 KTTLVPSRTFCIVSFGHSEAKIEAIMNDFIQLKPQSNVYEAETMVEGTLDGFLFDSEDES 277
K+T++PSRTFC+V+ G +EAKIEAIMNDFIQL PQSNVYEAETMVEGTL+GF F+S+DES
Sbjct: 328 KSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAETMVEGTLEGFTFESDDES 387
Query: 278 DKLAKAMPHQIDQNDGIEEQTNEKTKVKSQ 307
+K AK DQ+ G EE+TN K K K++
Sbjct: 388 NKNAKTAVKPADQSVGTEEETNTKAKPKAK 417
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 337 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 47.9 bits (113), Expect = 4e-06
Identities = 42/322 (13%), Positives = 98/322 (30%), Gaps = 97/322 (30%)
Query: 11 WL--RSFQAPTHSVL----TLSSDSDSDSSHNGNGDGGKNIAELTFEKHMEPFAPKSSIL 64
WL ++ +P +VL L D + D NI + + + L
Sbjct: 186 WLNLKNCNSP-ETVLEMLQKLLYQIDPN--WTSRSDHSSNI-----KLRIHSIQAELRRL 237
Query: 65 ASSSDSESC-------QNSSLLREEKAFQFQEKEM--DEDAALTGREEKTSVKKVSKEKS 115
S E+C QN+ AF K + +T + +S +
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAW---NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH- 293
Query: 116 PKKGLKSPKKEKDVINNVKRKGNNDHEDAEEDIAEKRSMLNVSTSTL--------PLVMS 167
L ++ + + + L+ L P +S
Sbjct: 294 HSMTL-------------------TPDEVKSLLLKY---LDCRPQDLPREVLTTNPRRLS 331
Query: 168 ---EKLQRTKAL------VECE--GESVDLSGDMGAVGRILVPGTAEGNHEMFLDLKGTI 216
E ++ A V C+ ++ S + +L P +MF L ++
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLN------VLEPAEYR---KMFDRL--SV 380
Query: 217 Y-KTTLVPSRTFCIVSFGHSEAKIEAIMNDF-----IQLKPQSNVYEAETMVEGTLDGFL 270
+ + +P+ ++ F ++ + ++N ++ +P+ + ++
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI--------SIPSIY 432
Query: 271 FDSEDESDKLAKAMPHQ--IDQ 290
+ + + + H+ +D
Sbjct: 433 LELKVKLENEYAL--HRSIVDH 452
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00