Citrus Sinensis ID: 019788

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQWSTSLDSNW
cccccEEEEEcccccccccccccccccccccccHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHcccccEEEEcccccccHHccccccEEEEEEccccccccHHHHHHHcccEEEEEEccccccccccccccEEEEEEEcccHHHHHHHHccccHHHHHHHHHHHHHHHccEEEccccccccHHHHHHHHHHHHHccccccccccccccc
cccEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHccccEEEccHcHccEEEEEEEHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEcccccHHHHHHcHHHHHHHHEEEEccccccccccccccEcccccccccccccccccccccEEEEEEccccccHHHHHHHHHccccccEEcccccccHHHHHHHccEEEEcccccccccHHHHHHHHHccccEEEEccccccHHHcccHHHEEEEEcHHcHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccEEccccccccccc
mnrsfrvyvyphrrndpfanvllpvdfeprgnyasesyFKKAFMkshfvtkdpskadlfflpfsiarmrhdrrigtegipdFISHYIFNIsqkypywnrtggadHFYVACHSIGRSAMQKAWEVKLNAIQVVCsssyfisghiahkdvslpqiwprqedppklgsskrNKLAFFAGAVNSPVREKLLQVWRNDseiyahsgrlktpyadellgskfclhvkgfevntariadslyyGCVPVIianhydlpfadvlnwKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHfqwhvfpsdydAFYMVMYELWLRRSSVRVQWSTSLDSNW
mnrsfrvyvyphrrndpfanvlLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFfagavnspvrEKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVrvqwstsldsnw
MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQWSTSLDSNW
****FRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIW****************LAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQW********
*NRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQW******N*
MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRV**********
*NRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQWSTS*****
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MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQWSTSLDSNW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query336 2.2.26 [Sep-21-2011]
Q9FFN2518 Probable glycosyltransfer no no 0.946 0.613 0.382 8e-55
Q9LFP3480 Probable glycosyltransfer no no 0.869 0.608 0.375 1e-49
Q3E7Q9480 Probable glycosyltransfer no no 0.946 0.662 0.351 4e-49
Q3E9A4466 Probable glycosyltransfer no no 0.946 0.682 0.363 1e-46
Q9SSE8470 Probable glycosyltransfer no no 0.943 0.674 0.35 3e-46
Q3EAR7470 Probable glycosyltransfer no no 0.880 0.629 0.344 4e-44
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.961 0.646 0.337 5e-43
Q940Q8415 Probable beta-1,4-xylosyl no no 0.845 0.684 0.271 5e-22
Q33AH8417 Probable glucuronosyltran no no 0.836 0.673 0.272 5e-21
Q6H4N0434 Probable glucuronosyltran no no 0.845 0.654 0.262 6e-21
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function desciption
 Score =  214 bits (544), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/340 (38%), Positives = 193/340 (56%), Gaps = 22/340 (6%)

Query: 1   MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASE-SYFKKAFMKSHFVTKDPSKADLF 59
           M + F++YVY       F       D   +  Y+ E S+  +    + F T +P KA +F
Sbjct: 186 MEKQFKIYVYKEGEPPLFH------DGPCKSIYSMEGSFIYEIETDTRFRTNNPDKAHVF 239

Query: 60  FLPFSIARM------RHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSI 113
           +LPFS+ +M      R+ R      I + +  YI  +  KYPYWNR+ GADHF ++CH  
Sbjct: 240 YLPFSVVKMVRYVYERNSRDFSP--IRNTVKDYINLVGDKYPYWNRSIGADHFILSCHDW 297

Query: 114 GRSAMQKAWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKL----GSSKRN 169
           G  A      +  N+I+ +C+++         KDVS+P+I  R      L      S R 
Sbjct: 298 GPEASFSHPHLGHNSIRALCNANTS-ERFKPRKDVSIPEINLRTGSLTGLVGGPSPSSRP 356

Query: 170 KLAFFAGAVNSPVREKLLQVWRN-DSEIYAHSGRLK-TPYADELLGSKFCLHVKGFEVNT 227
            LAFFAG V+ PVR  LLQ W N D++I  H    + T Y+D +  SKFC+   G+EV +
Sbjct: 357 ILAFFAGGVHGPVRPVLLQHWENKDNDIRVHKYLPRGTSYSDMMRNSKFCICPSGYEVAS 416

Query: 228 ARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLL 287
            RI ++LY GCVPV+I + Y  PF+DVLNW+SFS++V+  DIP LK IL  IS  +YL +
Sbjct: 417 PRIVEALYSGCVPVLINSGYVPPFSDVLNWRSFSVIVSVEDIPNLKTILTSISPRQYLRM 476

Query: 288 QSYVLKVRKHFQWHVFPSDYDAFYMVMYELWLRRSSVRVQ 327
              VLKVR+HF+ +     +D F+M+++ +W+RR +V+++
Sbjct: 477 YRRVLKVRRHFEVNSPAKRFDVFHMILHSIWVRRLNVKIR 516
May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description
>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query336
359481095336 PREDICTED: probable glycosyltransferase 0.991 0.991 0.840 1e-166
296089301 467 unnamed protein product [Vitis vinifera] 0.970 0.698 0.849 1e-165
255569522336 catalytic, putative [Ricinus communis] g 0.985 0.985 0.821 1e-164
224144815332 predicted protein [Populus trichocarpa] 0.985 0.996 0.788 1e-154
357508695 486 Exostosin-like protein [Medicago truncat 0.970 0.670 0.776 1e-153
356571729 487 PREDICTED: probable glycosyltransferase 0.988 0.681 0.777 1e-152
449527873 466 PREDICTED: probable glycosyltransferase 0.970 0.699 0.730 1e-145
449446746 466 PREDICTED: probable glycosyltransferase 0.970 0.699 0.726 1e-144
302804767376 glycosyltransferase-like protein [Selagi 0.967 0.864 0.601 1e-117
302780894376 glycosyltransferase-like protein [Selagi 0.967 0.864 0.595 1e-116
>gi|359481095|ref|XP_002265438.2| PREDICTED: probable glycosyltransferase At5g03795-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 280/333 (84%), Positives = 301/333 (90%)

Query: 1   MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFF 60
           MNRSF++Y YPH+R+DPFAN LLPVDFEP GNYASESYFKK  MKSHF+TKDPSKADLFF
Sbjct: 1   MNRSFKIYCYPHKRDDPFANALLPVDFEPGGNYASESYFKKVLMKSHFITKDPSKADLFF 60

Query: 61  LPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQK 120
           LPFSIAR+RHD R+G  GI DFI  YIFNISQ YPYWN+TGGADHFYVACHSIGRSAM+K
Sbjct: 61  LPFSIARLRHDPRVGVGGIQDFIRDYIFNISQNYPYWNQTGGADHFYVACHSIGRSAMEK 120

Query: 121 AWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNKLAFFAGAVNS 180
           A EVKLNAIQVVCSSSYF+SG+IAHKD SLPQIWPRQ DPP L  S+R KLAFFAG++NS
Sbjct: 121 ADEVKLNAIQVVCSSSYFLSGYIAHKDASLPQIWPRQGDPPDLALSERKKLAFFAGSINS 180

Query: 181 PVREKLLQVWRNDSEIYAHSGRLKTPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVP 240
           PVRE+LLQVWRNDSEI  H GRL TPYADELLGSKFCLHVKGFE+NTARIADSLYYGCVP
Sbjct: 181 PVRERLLQVWRNDSEISVHFGRLTTPYADELLGSKFCLHVKGFEINTARIADSLYYGCVP 240

Query: 241 VIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLKVRKHFQW 300
           VIIANHYDLPFAD+LNWKSFSIVVATLDIPLLK++LKGIS  EYL+LQS VLKVR HFQW
Sbjct: 241 VIIANHYDLPFADILNWKSFSIVVATLDIPLLKQVLKGISLNEYLMLQSNVLKVRNHFQW 300

Query: 301 HVFPSDYDAFYMVMYELWLRRSSVRVQWSTSLD 333
           HV P DYDAFYMVMYELWLRRSSVRV  ST +D
Sbjct: 301 HVSPVDYDAFYMVMYELWLRRSSVRVPLSTPMD 333

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089301|emb|CBI39073.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255569522|ref|XP_002525728.1| catalytic, putative [Ricinus communis] gi|223535028|gb|EEF36711.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224144815|ref|XP_002325425.1| predicted protein [Populus trichocarpa] gi|222862300|gb|EEE99806.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357508695|ref|XP_003624636.1| Exostosin-like protein [Medicago truncatula] gi|87162615|gb|ABD28410.1| Exostosin-like [Medicago truncatula] gi|116831751|gb|ABK28848.1| exostosin-like protein [Medicago truncatula] gi|355499651|gb|AES80854.1| Exostosin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356571729|ref|XP_003554026.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max] Back     alignment and taxonomy information
>gi|449527873|ref|XP_004170933.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449446746|ref|XP_004141132.1| PREDICTED: probable glycosyltransferase At5g03795-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|302804767|ref|XP_002984135.1| glycosyltransferase-like protein [Selaginella moellendorffii] gi|300147984|gb|EFJ14645.1| glycosyltransferase-like protein [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|302780894|ref|XP_002972221.1| glycosyltransferase-like protein [Selaginella moellendorffii] gi|300159688|gb|EFJ26307.1| glycosyltransferase-like protein [Selaginella moellendorffii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query336
TAIR|locus:2120933425 AT4G38040 "AT4G38040" [Arabido 0.946 0.748 0.427 2.7e-68
TAIR|locus:1009023450518 AT5G03795 [Arabidopsis thalian 0.952 0.617 0.387 5.5e-54
TAIR|locus:2125687593 AT4G32790 "AT4G32790" [Arabido 0.913 0.517 0.390 2.4e-53
TAIR|locus:2144231546 AT5G11610 "AT5G11610" [Arabido 0.928 0.571 0.379 6.3e-53
TAIR|locus:2145254654 AT5G25820 "AT5G25820" [Arabido 0.925 0.475 0.383 6.3e-53
TAIR|locus:2152632547 AT5G37000 "AT5G37000" [Arabido 0.872 0.535 0.375 4.1e-49
TAIR|locus:2145472480 AT5G25310 "AT5G25310" [Arabido 0.946 0.662 0.354 5.2e-49
TAIR|locus:2091122470 AT3G07620 "AT3G07620" [Arabido 0.934 0.668 0.355 7.7e-48
TAIR|locus:2100814470 AT3G42180 "AT3G42180" [Arabido 0.961 0.687 0.333 3.4e-45
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.958 0.644 0.347 5e-44
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 142/332 (42%), Positives = 204/332 (61%)

Query:     1 MNRSFRVYVYPHRRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFF 60
             M + F+VY+YP    DP  N       +  G YASE YF +   +S F T DP +ADLFF
Sbjct:   100 MEKRFKVYIYPD--GDP--NTFYQTPRKVTGKYASEGYFFQNIRESRFRTLDPDEADLFF 155

Query:    61 LPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQK 120
             +P S  +MR  +    E +   + +Y+  +  KYPYWNRT GADHF+V CH +G  A + 
Sbjct:   156 IPISCHKMR-GKGTSYENMTVIVQNYVDGLIAKYPYWNRTLGADHFFVTCHDVGVRAFEG 214

Query:   121 AWEVKLNAIQVVCSSSYFISGHIAHKDVSLPQIWPRQEDPPKLGSSKRNK--LAFFAGAV 178
             +  +  N I+VVCS SY + G I HKDV+LPQ+  +    P  G+   N+  L F+AG  
Sbjct:   215 SPLLIKNTIRVVCSPSYNV-GFIPHKDVALPQVL-QPFALPAGGNDVENRTTLGFWAGHR 272

Query:   179 NSPVREKLLQVWRNDSEIYAHSGRLKTP-----YADELLGSKFCLHVKGFEVNTARIADS 233
             NS +R  L  VW ND+E+   + R+        Y      +KFC+   G +VN+ARI DS
Sbjct:   273 NSKIRVILAHVWENDTELDISNNRINRATGHLVYQKRFYRTKFCICPGGSQVNSARITDS 332

Query:   234 LYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGISSEEYLLLQSYVLK 293
             ++YGC+PVI++++YDLPF D+LNW+ F++V+   D+  LK+ILK I   E++ L + ++K
Sbjct:   333 IHYGCIPVILSDYYDLPFNDILNWRKFAVVLREQDVYNLKQILKNIPHSEFVSLHNNLVK 392

Query:   294 VRKHFQWHVFPSDYDAFYMVMYELWLRRSSVR 325
             V+KHFQW+  P  +DAF+M+MYELWLR   V+
Sbjct:   393 VQKHFQWNSPPVKFDAFHMIMYELWLRHHVVK 424
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00027096001
SubName- Full=Chromosome chr8 scaffold_41, whole genome shotgun sequence; (336 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
pfam03016292 pfam03016, Exostosin, Exostosin family 7e-71
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  221 bits (566), Expect = 7e-71
 Identities = 90/296 (30%), Positives = 135/296 (45%), Gaps = 21/296 (7%)

Query: 1   MNRSFRVYVYPH-RRNDPFANVLLPVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLF 59
             +  +VYVY   RR +   +VL    +     YA+ES   K+ + S   T DP +ADLF
Sbjct: 1   SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNSRCRTLDPDEADLF 60

Query: 60  FLPFSIARMRHDRRIGTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQ 119
           F+PF  +       +      D +   +    +  PYWNR+GG DH  V  H  G SA  
Sbjct: 61  FVPFYTSLSVGTNAV----ERDLLPSELVEWLESLPYWNRSGGRDHIIVNSHPFGGSAFD 116

Query: 120 KAWEVKLNAIQVVCSSSYFIS-GHIAHKDVSLPQIWP----RQEDPPKLGSSKRNKLAFF 174
           +   +  N I  V +   F         DV LP  +        +   +  SKR  L FF
Sbjct: 117 RLPALNNNTILAVLAGGGFSEDQFRPGFDVPLPAYFHPNSVDDLESDGMPPSKRKTLLFF 176

Query: 175 AGAVN--------SPVREKLLQVWRNDSE--IYAHSGRLKTP-YADELLGSKFCLHVKGF 223
           AG           + +R+ L++  +N  +     +        Y + L  S+FCL   G 
Sbjct: 177 AGGPRPAGKGALANAIRDLLIEECKNSPDFQCEGNQSCGNPENYMELLRSSRFCLVPPGD 236

Query: 224 EVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGI 279
              + R+ D+L  GC+PVII++ ++LPF DV++W  FS+ V   DIP L +IL+ I
Sbjct: 237 TPTSPRLFDALRAGCIPVIISDGWELPFEDVIDWSKFSVRVPENDIPSLPEILRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 336
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.98
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.92
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 97.53
cd03801374 GT1_YqgM_like This family is most closely related 97.33
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 97.19
cd03820348 GT1_amsD_like This family is most closely related 97.12
cd03822366 GT1_ecORF704_like This family is most closely rela 97.06
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 97.06
cd03821375 GT1_Bme6_like This family is most closely related 96.91
cd03814364 GT1_like_2 This family is most closely related to 96.87
cd03818396 GT1_ExpC_like This family is most closely related 96.86
cd03794394 GT1_wbuB_like This family is most closely related 96.8
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 96.78
cd03819355 GT1_WavL_like This family is most closely related 96.74
cd03808359 GT1_cap1E_like This family is most closely related 96.64
cd03809365 GT1_mtfB_like This family is most closely related 96.64
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 96.54
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 96.54
cd03817374 GT1_UGDG_like This family is most closely related 96.44
PRK10307412 putative glycosyl transferase; Provisional 96.35
cd03823359 GT1_ExpE7_like This family is most closely related 96.35
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 96.29
cd04962371 GT1_like_5 This family is most closely related to 96.21
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 96.2
cd03800398 GT1_Sucrose_synthase This family is most closely r 96.04
cd03798377 GT1_wlbH_like This family is most closely related 96.03
cd03811353 GT1_WabH_like This family is most closely related 95.95
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 95.93
cd03807365 GT1_WbnK_like This family is most closely related 95.84
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 95.81
cd03804351 GT1_wbaZ_like This family is most closely related 95.79
cd04951360 GT1_WbdM_like This family is most closely related 95.69
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 95.68
cd03805392 GT1_ALG2_like This family is most closely related 95.6
PRK14098489 glycogen synthase; Provisional 95.43
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 95.42
cd04949372 GT1_gtfA_like This family is most closely related 95.39
cd03806419 GT1_ALG11_like This family is most closely related 95.36
PRK00654466 glgA glycogen synthase; Provisional 95.3
cd03816415 GT1_ALG1_like This family is most closely related 94.91
PRK14099485 glycogen synthase; Provisional 94.89
cd03825365 GT1_wcfI_like This family is most closely related 94.79
cd04955363 GT1_like_6 This family is most closely related to 94.76
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 94.55
cd03812358 GT1_CapH_like This family is most closely related 94.47
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 94.35
cd03802335 GT1_AviGT4_like This family is most closely relate 94.27
cd03796398 GT1_PIG-A_like This family is most closely related 94.1
cd03813475 GT1_like_3 This family is most closely related to 94.08
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 94.07
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 93.87
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 93.85
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 93.61
cd03795357 GT1_like_4 This family is most closely related to 93.54
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 93.53
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 93.52
PLN02949463 transferase, transferring glycosyl groups 93.49
cd04946407 GT1_AmsK_like This family is most closely related 93.06
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 92.53
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 91.46
PHA01633335 putative glycosyl transferase group 1 91.06
PHA01630331 putative group 1 glycosyl transferase 90.54
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 89.45
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 89.37
PLN02605382 monogalactosyldiacylglycerol synthase 89.32
PLN02939977 transferase, transferring glycosyl groups 89.04
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 88.85
PRK13609380 diacylglycerol glucosyltransferase; Provisional 87.64
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 87.51
PF0091998 UPF0004: Uncharacterized protein family UPF0004; I 87.35
PRK13608391 diacylglycerol glucosyltransferase; Provisional 86.89
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 85.5
PLN023161036 synthase/transferase 84.9
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 84.37
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 83.39
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 81.13
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 80.71
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-58  Score=436.51  Aligned_cols=276  Identities=35%  Similarity=0.618  Sum_probs=222.9

Q ss_pred             CCCCeEEEeCCCCCCCcccccC------CCCCCCCCcchHHHHHHHHHhcCCcccCCcCCccEEEEccccccccc-cCCC
Q 019788            2 NRSFRVYVYPHRRNDPFANVLL------PVDFEPRGNYASESYFKKAFMKSHFVTKDPSKADLFFLPFSIARMRH-DRRI   74 (336)
Q Consensus         2 ~~~~kIYVY~~~~~~~~~~~~~------p~~~~~~~~y~~E~~~~~~L~~S~~rT~dP~eAdlF~vP~~~~~~~~-~~~~   74 (336)
                      .++|||||||++  +.|+..++      ....+..++|++|.+|+++|++|+++|+||+|||+||||++.++... ..+.
T Consensus         2 ~~~lkVYVY~lp--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~l~~s~~~T~dp~eAdlF~vP~~~~~~~~~~~~~   79 (302)
T PF03016_consen    2 HRGLKVYVYPLP--PKFNKDLLDPREDEQCSWYETSQYALEVILHEALLNSPFRTDDPEEADLFFVPFYSSCYFHHWWGS   79 (302)
T ss_pred             CCCCEEEEEeCC--ccccccceeccccccCCCcccccchHHHHHHHHHHhCCcEeCCHHHCeEEEEEcccccccccccCC
Confidence            478999999999  45554443      12356789999999999999999999999999999999999887621 0110


Q ss_pred             -CCCChhhHHHHHHHHhhhcCccccccCCCCeEEEeecCCcchhhhhhHHHhhceEEEe-ccCCCccCCcccCCccccCc
Q 019788           75 -GTEGIPDFISHYIFNISQKYPYWNRTGGADHFYVACHSIGRSAMQKAWEVKLNAIQVV-CSSSYFISGHIAHKDVSLPQ  152 (336)
Q Consensus        75 -~~~~~~~~l~~~~~~l~~~~PyWnr~~G~dH~~v~~~d~g~~~~~~~~~~~~~ai~l~-~~~~~~~~~frp~~Dv~iP~  152 (336)
                       ........+..++..+++++|||||++|+||||++++|+|.|.....+....+++.++ ..+++...+|+|++||++|+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~  159 (302)
T PF03016_consen   80 PNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPP  159 (302)
T ss_pred             ccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEeccccccccccccHhhhccchhheeccCCCCcCcccCCCCeeccc
Confidence             1122345566777777888999999999999999999999887665555555555444 34556789999999999998


Q ss_pred             cCCCCC-CC----CCCCCCCCceEEEEeccCC-------chHHHHHHHHHhcCCCceEecCC----CchhHHHHhccccE
Q 019788          153 IWPRQE-DP----PKLGSSKRNKLAFFAGAVN-------SPVREKLLQVWRNDSEIYAHSGR----LKTPYADELLGSKF  216 (336)
Q Consensus       153 ~~~~~~-~~----~~~~~~~R~~l~~F~G~~~-------~~~R~~l~~~~~~~~~~~~~~g~----~~~~y~~~l~~S~F  216 (336)
                      ..+... ..    ...+..+|++|++|+|+..       +.+|+.|++.|.+.++..+..+.    .+.+|.+.|++|+|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~S~F  239 (302)
T PF03016_consen  160 FVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCSDGSETCPSPSEYMELLRNSKF  239 (302)
T ss_pred             cccccccCCccccccCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcceeeecccccccchHHHHhcccCeE
Confidence            765442 11    2345689999999999842       47999999999887765543221    23489999999999


Q ss_pred             EEeecCCCCCcchHHHHHhcCcEEEEEecccccCCCCCCCCCceEEEEcCCChhhHHHHHhCC
Q 019788          217 CLHVKGFEVNTARIADSLYYGCVPVIIANHYDLPFADVLNWKSFSIVVATLDIPLLKKILKGI  279 (336)
Q Consensus       217 cl~p~G~~~~s~rl~dal~~GcIPVii~d~~~lPf~~~idw~~~sv~v~~~~~~~l~~~L~~i  279 (336)
                      ||||+|+++++.||+|||.+|||||||+|++.|||+++|||++|||+|+++++++|+++|++|
T Consensus       240 CL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~~i  302 (302)
T PF03016_consen  240 CLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILRSI  302 (302)
T ss_pred             EEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999999999999999999999999986

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query336
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 98.01
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 97.42
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 97.01
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 97.0
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 96.9
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 96.8
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 96.67
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 96.49
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 96.31
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 96.3
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 96.27
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 96.24
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 96.15
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 96.09
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 95.69
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 95.49
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 94.45
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 94.4
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 94.25
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 93.94
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 92.72
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 91.68
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 89.76
3s2u_A365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 89.24
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 88.46
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 82.5
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 80.49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=98.01  E-value=4.7e-05  Score=63.19  Aligned_cols=128  Identities=13%  Similarity=0.092  Sum_probs=82.9

Q ss_pred             ceEEEEeccCCchHHHHHHHHHhcCCCceEecCCCc-hhHHHHhccccEEEeecCCCCCcchHHHHHhcCcEEEEEeccc
Q 019788          169 NKLAFFAGAVNSPVREKLLQVWRNDSEIYAHSGRLK-TPYADELLGSKFCLHVKGFEVNTARIADSLYYGCVPVIIANHY  247 (336)
Q Consensus       169 ~~l~~F~G~~~~~~R~~l~~~~~~~~~~~~~~g~~~-~~y~~~l~~S~Fcl~p~G~~~~s~rl~dal~~GcIPVii~d~~  247 (336)
                      ++-+.+.|.  +..+..+.+........+.. |..+ .+..+.++.|..++.|.-.......+.|||++||+|||..+..
T Consensus        32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~  108 (166)
T 3qhp_A           32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPL  108 (166)
T ss_dssp             GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTT
T ss_pred             CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCC
Confidence            466777885  33445554444332223334 6654 5788999999999999766666789999999999999994421


Q ss_pred             ccCCCCCCCCCceEEEEcCCChhhHHHHHhCC--CHHHHHHHHHHHHhhhccceecc
Q 019788          248 DLPFADVLNWKSFSIVVATLDIPLLKKILKGI--SSEEYLLLQSYVLKVRKHFQWHV  302 (336)
Q Consensus       248 ~lPf~~~idw~~~sv~v~~~~~~~l~~~L~~i--~~~~~~~m~~~~~~~~~~f~y~~  302 (336)
                      - ...+++.-...  .++..+..++.+.|..+  +++...+|.++.++..++|.|+.
T Consensus       109 ~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          109 S-ATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             C-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred             C-chhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence            1 11122222333  56777777666655554  67888899988887777777764
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query336
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 97.26
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 96.88
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 96.88
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 95.59
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 94.77
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 94.2
d1f0ka_351 Peptidoglycan biosynthesis glycosyltransferase Mur 89.92
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=97.26  E-value=0.00081  Score=61.66  Aligned_cols=118  Identities=17%  Similarity=0.258  Sum_probs=80.4

Q ss_pred             CCCCceEEEEecc-CCchHHHHHHHHHhcCCCceEecCCC-------chhHHHHhccccEEEeecC---CCCCcchHHHH
Q 019788          165 SSKRNKLAFFAGA-VNSPVREKLLQVWRNDSEIYAHSGRL-------KTPYADELLGSKFCLHVKG---FEVNTARIADS  233 (336)
Q Consensus       165 ~~~R~~l~~F~G~-~~~~~R~~l~~~~~~~~~~~~~~g~~-------~~~y~~~l~~S~Fcl~p~G---~~~~s~rl~da  233 (336)
                      ...|+.+++|.-+ .+++.|..+.+.++....+. ..|.|       ..+-.+.|++.+|+||...   .+..|-.++||
T Consensus       176 ~~~K~kFcs~v~Sn~~~~~R~~~~~~L~k~~~Vd-~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da  254 (349)
T d2nzwa1         176 DPLKRGFASFVASNPNAPIRNAFYDALNSIEPVT-GGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDA  254 (349)
T ss_dssp             CTTSSEEEEECCSCCCCHHHHHHHHHHTTTSCCE-ECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHH
T ss_pred             ccccCceEEEEEcCCCCchHHHHHHHHhccCeec-ccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHH
Confidence            3456667766644 55789999999987665432 23433       2356788999999999864   34569999999


Q ss_pred             HhcCcEEEEEecc-c--ccCCCCCCCCCceEEEEcCCChhhHHHHHhCCC--HHHHHHHHH
Q 019788          234 LYYGCVPVIIANH-Y--DLPFADVLNWKSFSIVVATLDIPLLKKILKGIS--SEEYLLLQS  289 (336)
Q Consensus       234 l~~GcIPVii~d~-~--~lPf~~~idw~~~sv~v~~~~~~~l~~~L~~i~--~~~~~~m~~  289 (336)
                      +.+|||||..++. +  .+|=...|+..+|      +.+.++.+.|..++  ++.+.+|-.
T Consensus       255 ~~~g~iPIy~G~~~i~~~f~~~sfI~~~df------~s~~el~~~i~~l~~n~~~Y~~~~~  309 (349)
T d2nzwa1         255 YFSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDMLY  309 (349)
T ss_dssp             HHTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             HhCCeEEEEECCCcHHHcCCCccEEEhhhC------CCHHHHHHHHHHHhcCHHHHHHHHh
Confidence            9999999999974 3  3443333444443      35677888887764  555666544
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure