Citrus Sinensis ID: 019789

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
Protein Sequence
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYCDL
Secondary Structure (PSIPRED)
cccccccccccEEEEEEccEEEHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEccccccHHHHHHHHHccccccEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHcccccEEEcccccccccccccccccccccccEEcccEEEEEHHHHHHHHcccccHHHHHHHHcccccccHHccHHHHHHcccccccccHHHHHHHHHHccccccccccccEEEcccccccccccccccccccccccHHHHHHHHHccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEcccccccHHHHHHHHHccccccEEEEEEccccccccccccccccEcccccccccEEEEccccHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHcccccHHHcccccccccccccccccccHHHHccccEEEEEEHHHHHHHHHcHHHHHHHHHHccccccHHHHccccccccccccccccccccccEEEEEccccccccccEEEEEEccccccccccccccccccccccHHHHHHHHcccccEEEEEcccccccEEEc
Coil and Loop (DISEMBL)
mtkkaapkvgrHVLWFSWKLVTFFCIAFSLVALFRLHLrydisssavsrtrsrihydgpAKIAFLFLARRElpldflwgsffeiadvenfsifihsapgfvfdelttrskffygrqlsNSIQVAWGESSMIAAERLLLEAAledpanqrfvllsdscvpiynFSYVYKYLMASPRSFVDSFLdrkesrynpkmsptipkgkwrkgsQWITLIRRHAevivddeiiFPVFkkcckrrppldarkgkmnmklqkqhncipdehYVQTLLAMSELEGELERRTLTYTQwnlsttgnqnwhpltfsyanagpqqikeikvvdfscfyivkdgyldeycdl
Flexible Loop (DISEMBL)
mtkkaapkvgrhvLWFSWKLVTFFCIAFSLVALFRLHLRYdisssavsrtrsrihyDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDrkesrynpkmsptipkgkwrkgsQWITLIRRHaevivddeiifpvfkkcckrrppldarkgkmnmkLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKdgyldeycdl
Low Complexity Region (SEG)
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIaaerllleaaleDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSelegelerrtltYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYCDL
Disordered region (IsUnstruct)
********VGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFL*****************GKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR****************QHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC**
Disordered Region (DISOPRED)
**************WFSWKLVTFFCIAFSLVALFRLHL************************AFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYCDL
Disordered Region (DISEMBL)
********VGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYCDL
Disordered Region (DISPRO)
**********RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYCDL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYCDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
225444319	380	PREDICTED: uncharacterized protein LOC10	0.946	0.836	0.737	1e-137
449433986	382	PREDICTED: uncharacterized protein LOC10	0.943	0.829	0.723	1e-133
255554795	405	conserved hypothetical protein [Ricinus	0.985	0.817	0.681	1e-132
224115850	386	predicted protein [Populus trichocarpa]	0.982	0.854	0.686	1e-130
356532315	377	PREDICTED: uncharacterized protein LOC10	0.901	0.803	0.696	1e-119
356557935	360	PREDICTED: uncharacterized protein LOC10	0.791	0.738	0.768	1e-115
297849568	383	hypothetical protein ARALYDRAFT_312224 [	0.943	0.827	0.594	1e-109
30682534	383	Core-2/I-branching beta-1,6-N-acetylgluc	0.943	0.827	0.597	1e-109
297837193	370	hypothetical protein ARALYDRAFT_475115 [	0.961	0.872	0.584	1e-104
42570100	378	Core-2/I-branching beta-1,6-N-acetylgluc	0.961	0.854	0.573	1e-104

>gi|225444319|ref|XP_002264137.1| PREDICTED: uncharacterized protein LOC100262450 [Vitis vinifera] gi|302144098|emb|CBI23203.3| unnamed protein product [Vitis vinifera]

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/324 (73%), Positives = 265/324 (81%), Gaps = 6/324 (1%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIH----Y 56
           MTKKA     RHV WF WKLV    +A  ++AL RL    ++SS ++     R +    Y
Sbjct: 1   MTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGPRFYRVSVY 60

Query: 57  DGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
            G  KIAFLFL RR LPLDFLWGSFFE AD  NFSI+IHS PGFVFDE T+RS+FFY RQ
Sbjct: 61  QGNPKIAFLFLVRRSLPLDFLWGSFFENADAANFSIYIHSQPGFVFDETTSRSRFFYNRQ 120

Query: 117 LSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
           LSNSIQVAWGESSMI AERLL EAALEDPANQRFVLLSDSCVP+YNFSY+Y Y+MASPRS
Sbjct: 121 LSNSIQVAWGESSMIQAERLLFEAALEDPANQRFVLLSDSCVPLYNFSYIYNYMMASPRS 180

Query: 177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
           +VDSFLD KE RYNPKMSP IPK KWRKGSQWI+L+R HAEVIVDD++IF VFKK CKRR
Sbjct: 181 YVDSFLDVKEGRYNPKMSPVIPKAKWRKGSQWISLVRSHAEVIVDDQVIFSVFKKFCKRR 240

Query: 237 PPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTG--NQ 294
           PP+DARKGK N+KLQKQHNCIPDEHYVQTLLAMSELE ELERRTLTYT+WNLS T    +
Sbjct: 241 PPIDARKGKQNIKLQKQHNCIPDEHYVQTLLAMSELESELERRTLTYTEWNLSVTKMERE 300

Query: 295 NWHPLTFSYANAGPQQIKEIKVVD 318
            WHP+TFSYANAGPQ+IKEIK V+
Sbjct: 301 GWHPITFSYANAGPQRIKEIKDVN 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433986|ref|XP_004134777.1| PREDICTED: uncharacterized protein LOC101222689 [Cucumis sativus] gi|449479497|ref|XP_004155615.1| PREDICTED: uncharacterized protein LOC101225507 [Cucumis sativus]

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/326 (72%), Positives = 266/326 (81%), Gaps = 9/326 (2%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLR---YDISSSAVSRTRSRIHYD 57
           M KKA     R + WFSWKL+  F +A  + AL  LH      D++S+++SR R R   D
Sbjct: 1   MKKKALLTPPRSLFWFSWKLLVTFSLALCIFALVSLHSSPSTTDLASASLSR-RLRPPSD 59

Query: 58  ---GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYG 114
              G  KIAFLFL RR LPLDFLWGSFFE  DV NFSI+IHSAPGFVFDE TTRS FF+G
Sbjct: 60  SFLGRPKIAFLFLTRRNLPLDFLWGSFFENGDVANFSIYIHSAPGFVFDESTTRSHFFFG 119

Query: 115 RQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASP 174
           RQL NSIQVAWG+SSMIAAERLLLEAALEDPANQRF+LLSDSCVP+YNFSY+Y YLMASP
Sbjct: 120 RQLENSIQVAWGKSSMIAAERLLLEAALEDPANQRFILLSDSCVPLYNFSYIYSYLMASP 179

Query: 175 RSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           +SFVDSFLD KE RYNPKMSP IPK KWRKGSQWI+LIR HAEV+VDD+IIFP+F   CK
Sbjct: 180 KSFVDSFLDAKEGRYNPKMSPAIPKSKWRKGSQWISLIRSHAEVVVDDDIIFPIFGLFCK 239

Query: 235 RRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTG-- 292
           RRPP+D  KG MN KLQKQHNCIPDEHYVQTLLA++ELEGELERRT+TYT WN STT   
Sbjct: 240 RRPPVDESKGIMNTKLQKQHNCIPDEHYVQTLLALNELEGELERRTVTYTLWNQSTTKME 299

Query: 293 NQNWHPLTFSYANAGPQQIKEIKVVD 318
           N+ WHP+TF+YANAGP+Q+KEIK +D
Sbjct: 300 NKGWHPITFTYANAGPRQVKEIKGID 325

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554795|ref|XP_002518435.1| conserved hypothetical protein [Ricinus communis] gi|223542280|gb|EEF43822.1| conserved hypothetical protein [Ricinus communis]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/352 (68%), Positives = 273/352 (77%), Gaps = 21/352 (5%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYD-----------ISSSAVSR 49
           MTKKA P   RHV+W  WKLV    ++  + AL RLH + D            SSS+  R
Sbjct: 14  MTKKAPPVPPRHVIWLGWKLVIILSVSLCVFALLRLHFQSDHYSSPSSSSSSSSSSSFYR 73

Query: 50  TRSRI-----HYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE 104
            RSR+      + GP K+AFLFL R++LPLDFLWGSFFE ADV +FSIFIHS+PGF FDE
Sbjct: 74  PRSRLSRANLEFHGPPKLAFLFLVRQDLPLDFLWGSFFENADVASFSIFIHSSPGFEFDE 133

Query: 105 LTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFS 164
            TTRS FFYGRQL NSIQVAWGESSMI AERLLL AALEDPANQRFVLLSDSCVP+YNFS
Sbjct: 134 STTRSHFFYGRQLKNSIQVAWGESSMIEAERLLLSAALEDPANQRFVLLSDSCVPLYNFS 193

Query: 165 YVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEI 224
           Y+Y Y+MASPRSFVDSFLD KE RYN KMSP I K KWRKGSQWITLIR HAEVIVDDE+
Sbjct: 194 YIYSYVMASPRSFVDSFLDTKEDRYNQKMSPIIQKHKWRKGSQWITLIRSHAEVIVDDEV 253

Query: 225 IFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYT 284
           IFP F+K CKRR PLDA KGK+N KLQKQ+NCIPDEHYVQTLL+M+ELEGELERRTLTYT
Sbjct: 254 IFPEFQKYCKRRLPLDASKGKLNAKLQKQNNCIPDEHYVQTLLSMAELEGELERRTLTYT 313

Query: 285 QWNLSTT--GNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC 334
            WNLS T   ++ WHP+TF+Y NAGPQ+I+EIK ++   +   +  Y  E+C
Sbjct: 314 VWNLSVTRMESKGWHPMTFTYGNAGPQKIREIKAINHVYY---ETEYRTEWC 362

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115850|ref|XP_002317140.1| predicted protein [Populus trichocarpa] gi|222860205|gb|EEE97752.1| predicted protein [Populus trichocarpa]

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/345 (68%), Positives = 266/345 (77%), Gaps = 15/345 (4%)

Query: 1   MTKKAA------PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRS-- 52
           MTKK++       +  R V+W  WKLV    +   + ALFR+HL      + +SR RS  
Sbjct: 1   MTKKSSLLPILLQQSRRRVIWSGWKLVIILSMGLCVFALFRIHLS-SPPETLLSRRRSFS 59

Query: 53  -RIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKF 111
             + + GP KIAFLFL RR LPLDFLWGSFFE AD  NFSI +HS PGF FDE TTRS F
Sbjct: 60  REVVFSGPPKIAFLFLVRRGLPLDFLWGSFFENADTGNFSIHVHSEPGFEFDESTTRSHF 119

Query: 112 FYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLM 171
           FYGRQL NSIQV WGESSMI AERLLL+AALEDPANQRFVLLSDSCVP+YNFSY+Y YLM
Sbjct: 120 FYGRQLKNSIQVIWGESSMIEAERLLLDAALEDPANQRFVLLSDSCVPLYNFSYIYSYLM 179

Query: 172 ASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKK 231
           ASPRSFVDSFLD KE RY+PKMSP IPK KWRKGSQWI LIR HAEVIVDD +I PVFKK
Sbjct: 180 ASPRSFVDSFLDVKEGRYHPKMSPVIPKDKWRKGSQWIALIRSHAEVIVDDVVILPVFKK 239

Query: 232 CCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTT 291
            CKRRPPLDA KGK+N+KLQKQHNCIPDEHYVQTLL+MSELEGELERRT+TYT WN S T
Sbjct: 240 LCKRRPPLDATKGKLNIKLQKQHNCIPDEHYVQTLLSMSELEGELERRTVTYTVWNQSAT 299

Query: 292 G--NQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC 334
              N+ WHP TFSYANA P++IKEIK ++   +   +  Y  E+C
Sbjct: 300 KMENKGWHPKTFSYANASPRKIKEIKGINHIDY---ETEYRTEWC 341

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532315|ref|XP_003534719.1| PREDICTED: uncharacterized protein LOC100805897 [Glycine max]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/316 (69%), Positives = 253/316 (80%), Gaps = 13/316 (4%)

Query: 11  RHVLWFSWKLVTFFCIAFSLV------ALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAF 64
           RH +  S K++  F  + S V      +LFR H         +S + SR+ +DGP KIAF
Sbjct: 11  RHSI-ISRKMLILFSASLSCVVVLVICSLFRFH----SPKPPISISISRVVFDGPPKIAF 65

Query: 65  LFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVA 124
           LFL RR LPLDFLW +FF+  DV  FSI++HSAPGFV DE TTRS+F YGRQ+SNSIQV 
Sbjct: 66  LFLVRRNLPLDFLWDAFFQNVDVSRFSIYVHSAPGFVLDESTTRSQFLYGRQISNSIQVL 125

Query: 125 WGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDR 184
           WGESSMI AERLLL AALEDPANQRFVLLSDSCVP+YNFSYVY YLM SPRSFVDSFLD 
Sbjct: 126 WGESSMIQAERLLLAAALEDPANQRFVLLSDSCVPLYNFSYVYNYLMVSPRSFVDSFLDA 185

Query: 185 KESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKG 244
           KE RYNPKMSP IP+ KWRKGSQWIT++R+HAEV+VDD++IF VFKK CKRRPP+D  KG
Sbjct: 186 KEGRYNPKMSPKIPREKWRKGSQWITVVRKHAEVVVDDDVIFSVFKKYCKRRPPIDTSKG 245

Query: 245 KMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTG--NQNWHPLTFS 302
           K+N+KLQKQHNCIPDEHYVQTLLAM +LEGELERRTLTYT WN STT   N+ WHP+TF 
Sbjct: 246 KLNLKLQKQHNCIPDEHYVQTLLAMHDLEGELERRTLTYTLWNQSTTKMENKGWHPITFG 305

Query: 303 YANAGPQQIKEIKVVD 318
           Y+NA PQ+IKEIK ++
Sbjct: 306 YSNASPQRIKEIKGIN 321

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557935|ref|XP_003547265.1| PREDICTED: uncharacterized protein LOC100800690 [Glycine max]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/268 (76%), Positives = 231/268 (86%), Gaps = 2/268 (0%)

Query: 53  RIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFF 112
           R+ +DGP KIAFLFL RR LPLDFLW +FF+  DV  FSI++HSAPGFV DE TTRS+ F
Sbjct: 37  RVVFDGPPKIAFLFLVRRNLPLDFLWDAFFQNGDVSRFSIYVHSAPGFVLDESTTRSQLF 96

Query: 113 YGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMA 172
           YGRQ+SNSIQV WGESSMI AERLLL AALED ANQRFVLLSDSCVP+YNFSYVY YLM 
Sbjct: 97  YGRQISNSIQVLWGESSMIQAERLLLAAALEDHANQRFVLLSDSCVPLYNFSYVYNYLMV 156

Query: 173 SPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKC 232
           SPRSFVDSFLD KE RYNPKMS  IP+ KWRKGSQWIT++R+HAEVIVDD++IF VFKK 
Sbjct: 157 SPRSFVDSFLDAKEGRYNPKMSTKIPREKWRKGSQWITVVRKHAEVIVDDDVIFSVFKKY 216

Query: 233 CKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTG 292
           CKRRPP+D  KGK+N+KLQKQHNCIPDEHYVQTLLAM +LEGELERRTLTYT WN STT 
Sbjct: 217 CKRRPPIDTSKGKLNLKLQKQHNCIPDEHYVQTLLAMHDLEGELERRTLTYTLWNQSTTK 276

Query: 293 --NQNWHPLTFSYANAGPQQIKEIKVVD 318
             N+ WHP+TF Y+NA PQ+IKEIK ++
Sbjct: 277 MENKGWHPITFGYSNASPQRIKEIKGIN 304

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849568|ref|XP_002892665.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata] gi|297338507|gb|EFH68924.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/333 (59%), Positives = 255/333 (76%), Gaps = 16/333 (4%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MT+K+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTRKSQPQIQPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSDTTLPSPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSLPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMIAAERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIAAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           +YL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 RYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIDLIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWN 287
           VFK+ CKR PPL   +  + +K QK+ NCIPDEHYVQTLL M  LE E+ERRT+TYT WN
Sbjct: 241 VFKEFCKRCPPLGTNEAWLFLK-QKRRNCIPDEHYVQTLLTMQGLESEMERRTVTYTAWN 299

Query: 288 LSTTG--NQNWHPLTFSYANAGPQQIKEIKVVD 318
           +S T    ++WHP+TF+  N+GP++IKEIK +D
Sbjct: 300 VSGTKYEAKSWHPVTFTLENSGPEEIKEIKKID 332

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682534|ref|NP_172658.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|26450342|dbj|BAC42287.1| unknown protein [Arabidopsis thaliana] gi|28827514|gb|AAO50601.1| unknown protein [Arabidopsis thaliana] gi|332190698|gb|AEE28819.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/333 (59%), Positives = 254/333 (76%), Gaps = 16/333 (4%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MTKK+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMI AERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWN 287
           VFK+ CKR PPL   +  + +K QK+ NCIPDEHYVQTLL M  LE E+ERRT+TYT WN
Sbjct: 241 VFKEFCKRCPPLGTNEAWLFLK-QKRRNCIPDEHYVQTLLTMQGLESEMERRTVTYTVWN 299

Query: 288 LSTTG--NQNWHPLTFSYANAGPQQIKEIKVVD 318
           +S T    ++WHP+TF+  N+GP++IKEIK +D
Sbjct: 300 VSGTKYEAKSWHPVTFTLENSGPEEIKEIKKID 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297837193|ref|XP_002886478.1| hypothetical protein ARALYDRAFT_475115 [Arabidopsis lyrata subsp. lyrata] gi|297332319|gb|EFH62737.1| hypothetical protein ARALYDRAFT_475115 [Arabidopsis lyrata subsp. lyrata]

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/339 (58%), Positives = 248/339 (73%), Gaps = 16/339 (4%)

Query: 7   PKVGRHVLWFSWKLVTFFCIAFSLVALFRLH-------LRYDISSSAVSRTR-SRIHYDG 58
           P   R V+WF WK++T    A  ++ALF  +            SS +V+R+R   + Y G
Sbjct: 5   PSSRRGVVWFRWKILTTLSAALCILALFSFNRHSNSTATTTLSSSLSVARSRIPLVKYSG 64

Query: 59  P-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQL 117
              K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS+FFY RQL
Sbjct: 65  DRPKLAFLFLARRDLPLDFLWDRFFKNADQRNFSIYVHSIPGFVFDESSTRSQFFYNRQL 124

Query: 118 SNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSF 177
            NSIQV WGESSMIAAERLLL +ALEDP NQRFVLLSDSCVP+Y+F Y+Y+YL++SP SF
Sbjct: 125 KNSIQVVWGESSMIAAERLLLASALEDPLNQRFVLLSDSCVPLYDFGYIYRYLVSSPMSF 184

Query: 178 VDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRP 237
           VDSFLD K+ RY  KM P I K KWRKGSQWI+LIR HAEV+V+D+ +FPVF+K CKR  
Sbjct: 185 VDSFLD-KDKRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVVVNDDTVFPVFQKFCKRSL 243

Query: 238 PLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQ--N 295
           PLD RK  + +K +++HNCIPDEHYVQTLL M  LE E+ERRT+TYT WNLS    +  +
Sbjct: 244 PLDPRKNWLYLK-KRRHNCIPDEHYVQTLLTMHGLENEMERRTVTYTTWNLSAKKAEAKS 302

Query: 296 WHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC 334
           WHPLTF+  N+GP++I+ IK ++   +   +  Y  E+C
Sbjct: 303 WHPLTFTSDNSGPEEIEGIKKINHVYY---ESEYRTEWC 338

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570100|ref|NP_683459.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|49823486|gb|AAT68726.1| hypothetical protein At1g62305 [Arabidopsis thaliana] gi|58743302|gb|AAW81729.1| At1g62305 [Arabidopsis thaliana] gi|60547649|gb|AAX23788.1| hypothetical protein At1g62305 [Arabidopsis thaliana] gi|61656151|gb|AAX49378.1| At1g62305 [Arabidopsis thaliana] gi|332195830|gb|AEE33951.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/340 (57%), Positives = 251/340 (73%), Gaps = 17/340 (5%)

Query: 7   PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSA--------VSRTR-SRIHYD 57
           P   R V+WF WK++     A  ++ALF ++ + + +++         V+R+R   + Y 
Sbjct: 5   PSSRRGVVWFRWKILITISTALCILALFCINRQSNSTATTTTLSSSLSVARSRIPLVKYS 64

Query: 58  GP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
           G   K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS FFY RQ
Sbjct: 65  GDRPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQ 124

Query: 117 LSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
           L NSI+V WGESSMIAAERLLL +ALEDP+NQRFVLLSDSCVP+Y+F Y+Y+YL++SP+S
Sbjct: 125 LKNSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKS 184

Query: 177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
           FVDSFLD K++RY  KM P I K KWRKGSQWI+LIR HAEVIV+D+ +FPVF+K CKR 
Sbjct: 185 FVDSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCKRS 243

Query: 237 PPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELERRTLTYTQWNLSTTGNQ-- 294
            PLD RK  + +K +++HNCIPDEHYVQTLL M  LE E+ERRT+TYT WNLS    +  
Sbjct: 244 LPLDPRKNWLYLK-KRRHNCIPDEHYVQTLLTMRGLENEMERRTVTYTTWNLSAKKAEAK 302

Query: 295 NWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC 334
           +WHPLTF+  N GP++I+ IK ++   +   +  Y  E+C
Sbjct: 303 SWHPLTFTSDNCGPEEIEGIKKINHVYY---ESEYRTEWC 339

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	336
TAIR|locus:2008890	383	AT1G11940 [Arabidopsis thalian	0.943	0.827	0.549	2.1e-93
TAIR|locus:504956294	378	AT1G62305 [Arabidopsis thalian	0.961	0.854	0.535	9.3e-91
TAIR|locus:2222637	377	AT5G14550 [Arabidopsis thalian	0.955	0.851	0.445	1.4e-71
TAIR|locus:2012748	412	AT1G10280 [Arabidopsis thalian	0.568	0.463	0.387	3.5e-38
TAIR|locus:2128181	376	AT4G31350 [Arabidopsis thalian	0.562	0.502	0.377	4.5e-38
TAIR|locus:2027769	418	AT1G73810 [Arabidopsis thalian	0.508	0.409	0.426	7.2e-36
TAIR|locus:2165605	388	AT5G57270 [Arabidopsis thalian	0.702	0.608	0.344	7.4e-34
TAIR|locus:2059040	394	AT2G19160 [Arabidopsis thalian	0.696	0.593	0.343	5.2e-33
TAIR|locus:2197354	651	AT1G10880 [Arabidopsis thalian	0.553	0.285	0.395	9.8e-33
TAIR|locus:2117542	389	AT4G25870 [Arabidopsis thalian	0.758	0.655	0.319	6e-32

TAIR|locus:2008890 AT1G11940 [Arabidopsis thaliana (taxid:3702)]

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 183/333 (54%), Positives = 235/333 (70%)

Query:     1 MTKKAAPKV----GRH--VLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
             MTKK+ P++     R   V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct:     1 MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query:    50 TRSRIH-YDGPA-KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
             +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct:    61 SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query:   108 RSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVY 167
             RS++FY RQL+NSI+V WGESSMI            D +NQRFVLLSD C P+Y+F Y+Y
Sbjct:   121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query:   168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
             KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct:   181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query:   228 VFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSXXXXXXXXXXXXYTQWN 287
             VFK+ CKR PPL   +  + +K QK+ NCIPDEHYVQTLL M             YT WN
Sbjct:   241 VFKEFCKRCPPLGTNEAWLFLK-QKRRNCIPDEHYVQTLLTMQGLESEMERRTVTYTVWN 299

Query:   288 LSTTGNQ--NWHPLTFSYANAGPQQIKEIKVVD 318
             +S T  +  +WHP+TF+  N+GP++IKEIK +D
Sbjct:   300 VSGTKYEAKSWHPVTFTLENSGPEEIKEIKKID 332

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956294 AT1G62305 [Arabidopsis thaliana (taxid:3702)]

 Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
 Identities = 182/340 (53%), Positives = 232/340 (68%)

Query:     7 PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDIS------SSAVSRTRSRI---HYD 57
             P   R V+WF WK++     A  ++ALF ++ + + +      SS++S  RSRI    Y 
Sbjct:     5 PSSRRGVVWFRWKILITISTALCILALFCINRQSNSTATTTTLSSSLSVARSRIPLVKYS 64

Query:    58 GPA-KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
             G   K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS FFY RQ
Sbjct:    65 GDRPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQ 124

Query:   117 LSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
             L NSI+V WGESSMI            DP+NQRFVLLSDSCVP+Y+F Y+Y+YL++SP+S
Sbjct:   125 LKNSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKS 184

Query:   177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
             FVDSFLD K++RY  KM P I K KWRKGSQWI+LIR HAEVIV+D+ +FPVF+K CKR 
Sbjct:   185 FVDSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCKRS 243

Query:   237 PPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSXXXXXXXXXXXXYTQWNLSTTGNQ-- 294
              PLD RK  + +K +++HNCIPDEHYVQTLL M             YT WNLS    +  
Sbjct:   244 LPLDPRKNWLYLK-KRRHNCIPDEHYVQTLLTMRGLENEMERRTVTYTTWNLSAKKAEAK 302

Query:   295 NWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC 334
             +WHPLTF+  N GP++I+ IK ++   +Y  +  Y  E+C
Sbjct:   303 SWHPLTFTSDNCGPEEIEGIKKINH-VYY--ESEYRTEWC 339

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2222637 AT5G14550 [Arabidopsis thaliana (taxid:3702)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 152/341 (44%), Positives = 216/341 (63%)

Query:     8 KVGRHVLWFSWK------LVTFFCIA-FSLV-ALFR-LHLRYD-ISSSAVSRTRSRIHYD 57
             KV +  L + WK      L+  FC   F  + A F  +  R++ IS+S  S  + R+  D
Sbjct:     4 KVSQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKKPRL--D 61

Query:    58 GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQL 117
                +IAFLF+AR  LPL+F+W +FF+  D + FSI++HS PGFV +E TTRSK+F  RQL
Sbjct:    62 QRPQIAFLFIARNRLPLEFVWDAFFKGEDGK-FSIYVHSRPGFVLNEATTRSKYFLDRQL 120

Query:   118 SNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSF 177
             ++SIQV WGES+MI            D  N RFV LSDSC+P+Y+FSY Y Y+M++P SF
Sbjct:   121 NDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTPTSF 180

Query:   178 VDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRP 237
             VDSF D K+SRYNP+M+P IP   WRKGSQW+ L R+HAE++V+D  +FP+F++ C+R+ 
Sbjct:   181 VDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCRRKS 240

Query:   238 -PLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSXXXXXXXXXXXXYTQWNLSTT-GNQN 295
              P   R   +  +  K+HNCIPDEHYVQTLL+              ++ W+LS++  N+ 
Sbjct:   241 LPEFWRDRPVPAEGWKEHNCIPDEHYVQTLLSQKGVDSELTRRSLTHSAWDLSSSKSNER 300

Query:   296 --WHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDEYC 334
               WHP+T+ +++A P  I+ IK +D +  Y  +  Y  E+C
Sbjct:   301 RGWHPMTYKFSDATPDLIQSIKGID-NINYETE--YRREWC 338

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0007623 "circadian rhythm" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2012748 AT1G10280 [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 84/217 (38%), Positives = 115/217 (52%)

Query:    56 YDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGR 115
             YD   K+AF+FL R  LP+  LW  FF+  + +  S+++H+ PG+  D   +R   FY R
Sbjct:   138 YDRVPKVAFMFLTRGPLPMLPLWEKFFK-GNEKYLSVYVHTPPGY--DMNVSRDSPFYDR 194

Query:   116 QLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPR 175
             Q+ +  +V WG   +             D +N+RFVLLS+SCVP+YNFS VY YL+ S  
Sbjct:   195 QIPSQ-RVEWGSPLLTDAEKRLLANALLDFSNERFVLLSESCVPVYNFSTVYTYLINSAY 253

Query:   176 SFVDSFLDRKE---SRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKC 232
             SFVDS+ +       RY+ KM P I    WRKGSQW  + R+ A  I+ D   + +FK+ 
Sbjct:   254 SFVDSYDEPTRYGRGRYSRKMLPDIKLHHWRKGSQWFEVNRKIAIYIISDSKYYSLFKQF 313

Query:   233 CKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAM 269
             C  RP                  C PDEHY+ T L M
Sbjct:   314 C--RPA-----------------CYPDEHYIPTFLNM 331

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2128181 AT4G31350 [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
 Identities = 80/212 (37%), Positives = 116/212 (54%)

Query:    61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS 120
             K+AF+FL    LP + LW  FF       FS+++H++       + T S +F GR + +S
Sbjct:    89 KLAFMFLTPGTLPFEPLWEMFFR-GHENKFSVYVHASKK---SPVHT-SSYFVGRDI-HS 142

Query:   121 IQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDS 180
              +VAWG+ SM+            DP NQ F+LLSDSCVP+++F+Y+Y +L+ +  SF+D 
Sbjct:   143 HKVAWGQISMVDAERRLLAHALVDPDNQHFILLSDSCVPLFDFNYIYNHLIFANLSFIDC 202

Query:   181 FLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRP 237
             F D       RY+  M P + K  +RKGSQW ++ RRHA V++ D + +  FK  C  RP
Sbjct:   203 FEDPGPHGSGRYSQHMLPEVEKKDFRKGSQWFSMKRRHAIVVMADSLYYTKFKLYC--RP 260

Query:   238 PLDARKGKMNMKLQKQHNCIPDEHYVQTLLAM 269
              ++ R            NC  DEHY  TL  M
Sbjct:   261 NMEGR------------NCYADEHYFPTLFNM 280

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2027769 AT1G73810 [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
 Identities = 75/176 (42%), Positives = 101/176 (57%)

Query:    61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS 120
             K AF+FL R +LPL  LW  FF+      FSI+IH++  F FD+ T  +  FY R++ + 
Sbjct:   147 KAAFMFLTRGKLPLAKLWERFFK-GHEGLFSIYIHTSDPFYFDDHTPETSPFYRRRIPSK 205

Query:   121 IQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDS 180
              +V WG  SM+            D  N RFVLLS+S +P++NFS +Y YL+ S  S+VD 
Sbjct:   206 -EVGWGMVSMVAAERRLLANALLDAGNHRFVLLSESDIPLFNFSTIYSYLINSQHSYVDV 264

Query:   181 F-LDRK--ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCC 233
             + L       RYN +MSP I +  WRKGSQW  + R  A  +V D   FPVF+K C
Sbjct:   265 YDLPGPAGRGRYNRRMSPVISRTNWRKGSQWFEIDREVALAVVSDTTYFPVFEKYC 320

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165605 AT5G57270 [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 91/264 (34%), Positives = 131/264 (49%)

Query:    60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSN 119
             +KIAF+FL    LP + LW  FF+      FSI+IH  P  +       S+ F  R++ +
Sbjct:    97 SKIAFMFLTPGTLPFEKLWDKFFQ-GQEGRFSIYIH--PSRL--RPVHISRHFSDREI-H 150

Query:   120 SIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVD 179
             S  V WG  SM+            DP NQ FVLLS+SC+P++ F Y Y+YLM +  SF+D
Sbjct:   151 SDHVTWGRISMVDAERRLLANALEDPDNQHFVLLSESCIPLHTFDYTYRYLMHANVSFID 210

Query:   180 SFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
             SF D       R+   M P IP+  +RKG+QW T+ R+HA +++ D + +  F++ C  R
Sbjct:   211 SFEDLGPHGTGRHMDHMLPEIPRQDFRKGAQWFTMKRQHAVIVMADGLYYSKFREYC--R 268

Query:   237 PPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSXXXXXXXXXXXXYTQWNLSTTGNQNW 296
             P ++A K           NCI DEHY+ T   M             Y  W+      + W
Sbjct:   269 PGVEANK-----------NCIADEHYLPTFFHM-LDPGGISNWSVTYVDWS-----ERRW 311

Query:   297 HPLTFSYANAGPQQIKEIKVVDFS 320
             HP T+   +   + +K I   D S
Sbjct:   312 HPKTYRARDVSLKLLKNITSDDMS 335

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2059040 AT2G19160 [Arabidopsis thaliana (taxid:3702)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 90/262 (34%), Positives = 128/262 (48%)

Query:    60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSN 119
             +KIAF+FL    LP + LW  FF+      FS++IH++     D     S++F  R++  
Sbjct:   105 SKIAFMFLTPGTLPFEKLWDLFFQ-GHEGKFSVYIHASK----DTPVHTSRYFLNREI-R 158

Query:   120 SIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVD 179
             S +V WG  SMI            DP NQ+FVLLSDSCVP+ +F Y+Y Y+M S  S+VD
Sbjct:   159 SDEVVWGRISMIDAERRLLTNALRDPENQQFVLLSDSCVPLRSFEYMYNYMMHSNVSYVD 218

Query:   180 SFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
              F D       R+   M P IP+  +RKG+QW ++ R+HA V V D + +  F+  C   
Sbjct:   219 CFDDPGPHGTGRHMDHMLPEIPREDFRKGAQWFSMKRQHAVVTVADNLYYSKFRDYCG-- 276

Query:   237 PPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSXXXXXXXXXXXXYTQWNLSTTGNQNW 296
             P ++  K           NCI DEHY+ T   M             Y  W+      + W
Sbjct:   277 PGVEGNK-----------NCIADEHYLPTFFYM-LDPTGIANWTVTYVDWS-----ERKW 319

Query:   297 HPLTFSYANAGPQQIKEIKVVD 318
             HP  +   +   + IK I  +D
Sbjct:   320 HPRKYMPEDITLELIKNISSID 341

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2197354 AT1G10880 [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 9.8e-33, Sum P(2) = 9.8e-33
 Identities = 78/197 (39%), Positives = 109/197 (55%)

Query:    46 AVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENF-SIFIHSAPGFVFDE 104
             A    RS +  +   K+AF+FL R  LPL  LW  FF+    E F SI++H++P F  + 
Sbjct:   103 AAMAPRSPMKNETHPKVAFMFLTRWNLPLSPLWEMFFK--GHEGFYSIYVHTSPEFTQEP 160

Query:   105 LTTRSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFS 164
                 S  FY +++ +   V WG+ SM+            +P+N RFVLLS++C+P++NF+
Sbjct:   161 --PESSVFYKKRIPSKA-VEWGKCSMMDAEKRLISHALLEPSNARFVLLSETCIPLFNFT 217

Query:   165 YVYKYLMASPRSFVDSFLDRK---ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVD 221
              +Y YL  S RSF+ SF D +     RY PKM P +    WRKG+QW  + RR A  IV 
Sbjct:   218 TIYTYLTRSTRSFLGSFDDPRPMGRGRYTPKMLPHVSLSDWRKGNQWFEISRRVAAEIVS 277

Query:   222 DEIIFPVFKKCCKRRPP 238
             D   + VFK  C  RPP
Sbjct:   278 DRRYYAVFKDHC--RPP 292

GO:0005634 "nucleus" evidence=ISM

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2117542 AT4G25870 [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 91/285 (31%), Positives = 139/285 (48%)

Query:    41 DISSSAVSRT--RSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAP 98
             +I++ AV R   R+       +KIAFLFL    LP + LW  FF+      FSI+IH + 
Sbjct:    77 EIAARAVVRDILRTPPFITNNSKIAFLFLTPGTLPFEKLWDEFFK-GHEGKFSIYIHPSK 135

Query:    99 GFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCV 158
                 +     S+ F  R++ +S +V WG  SM+            DP NQ FVL+S+SC+
Sbjct:   136 ----ERPVHISRHFSDREI-HSDEVTWGRISMVDAEKRLLVSALEDPDNQHFVLVSESCI 190

Query:   159 PIYNFSYVYKYLMASPRSFVDSFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRH 215
             P++ F Y Y+YL+ S  SF++SF+D       R+   M P I K  +RKG+QW T+ R+H
Sbjct:   191 PLHTFDYTYRYLLYSNVSFIESFVDPGPHGTGRHMEHMLPEIAKEDFRKGAQWFTMKRQH 250

Query:   216 AEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSXXXXX 275
             A +++ D + +  F++ C   P ++A K           NCI DEHY+ T   M      
Sbjct:   251 AIIVMADGLYYSKFREYCG--PGIEADK-----------NCIADEHYLPTFFNM-IDPMG 296

Query:   276 XXXXXXXYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFS 320
                    +  W+      + WHP T+       + +K +   D S
Sbjct:   297 ISNWSVTFVDWS-----ERRWHPKTYGGNEISLEFMKNVTSEDMS 336

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006882001 SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (380 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	336
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	8e-70

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  217 bits (555), Expect = 8e-70
 Identities = 99/269 (36%), Positives = 131/269 (48%), Gaps = 42/269 (15%)

Query: 62  IAFLFLA-RRELPLDFLWGSFFEIADVEN-FSIFIHS-APGFVFDELTTR-SKFFYGRQL 117
           IAF+FL  + +LP   LW  FF     +N + I++ + +P    + L    S FF  R +
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHP--QNLYCIYVDAKSPSEFKERLRALASCFFNVRVI 58

Query: 118 SNSIQVAWGESSMIAAERLLLEAALE-DPANQRFVLLSDSCVPIYNFSYVYKYLMASPR- 175
             S  V WG  SM+ AER LL   L  DP+   FVLLS+S +P+  F  +Y+YL +    
Sbjct: 59  PKSEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGN 118

Query: 176 -SFVDSFLD--RKES-RYNPKMSPTIPK----GKWRKGSQWITLIRRHAEVIVDDEIIFP 227
            SFV+SF D   K   RYNP+M P I       KWRKGSQW  L R  AE +V D + +P
Sbjct: 119 NSFVESFDDPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAFAEYVVSDNLYYP 178

Query: 228 VFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMS-ELEGELERRTLTYTQW 286
           +FK  C                    + C PDEHY  TLL M          RTLTY  W
Sbjct: 179 LFKYYC--------------------NTCYPDEHYFPTLLGMPGHFPNTCVNRTLTYVDW 218

Query: 287 NLSTTGNQNWHPLTFSYANAGPQQIKEIK 315
           +         HP T+   + GP+ +K I+
Sbjct: 219 S-----RGGCHPKTYRPCDIGPEDLKRIR 242

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	336
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.96

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=2.7e-50  Score=372.99  Aligned_cols=225  Identities=29%  Similarity=0.501  Sum_probs=152.7

Q ss_pred             EEEEEEecC-CCChHHHHHHHHhHhcCCCeEEEEEeCCCCccc--c-----ccccCccccccccCCcceeecCCccHHHH
Q 019789           62 IAFLFLARR-ELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--E-----LTTRSKFFYGRQLSNSIQVAWGESSMIAA  133 (336)
Q Consensus        62 iAfLilah~-~~~~~~l~~rl~~~l~~~~~~iyIHvD~k~~~~--~-----~~~~~~vf~~r~i~~rv~V~WG~~SlV~A  133 (336)
                      |||||+||+ ++++   ++++++.++++.+.+|||+|+++...  +     ....+++++   +++|++|.|||+|||+|
T Consensus         1 iAylil~h~~~~~~---~~~l~~~l~~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~---v~~r~~v~WG~~S~v~A   74 (244)
T PF02485_consen    1 IAYLILAHKNDPEQ---LERLLRLLYHPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHF---VPKRVDVRWGGFSLVEA   74 (244)
T ss_dssp             EEEEEEESS--HHH---HHHHHHHH--TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE----SS-----TTSHHHHHH
T ss_pred             CEEEEEecCCCHHH---HHHHHHHhcCCCCEEEEEEcCCCChHHHHHHHHhcccCCceee---cccccccccCCccHHHH
Confidence            799999998 6677   88999999888999999999996421  1     123455544   78899999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEecCCcccCCChHHHHHHHhcC-C-CCceeccccCCc---CccCCC----CCCCCCCCccc
Q 019789          134 ERLLLEAALE-DPANQRFVLLSDSCVPIYNFSYVYKYLMAS-P-RSFVDSFLDRKE---SRYNPK----MSPTIPKGKWR  203 (336)
Q Consensus       134 ~l~Ll~~AL~-d~~~~~fvlLSgsd~PL~s~~~I~~~L~~~-~-~sFI~~~~~~~~---~RY~~~----m~p~ip~~~~~  203 (336)
                      |+.||++|++ +++|+|||||||+|+||+|+++|.+||+++ + .+|++++.....   .||.+.    +.+..+..+++
T Consensus        75 ~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~~~f~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   75 TLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGDNNFIESFSDEDPRESGRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT--B---BEE--GGGG-HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCCCcceecccccccchhhcceeeeeeeccccccccccc
Confidence            9999999999 789999999999999999999999999998 3 788987654321   455443    22222334899


Q ss_pred             cccceeeecHHHHHHhhcccchhHHHhhhhcCCCCCcccccchhhhcccccccccCchHHHHHhhCC-CCCCccccCceE
Q 019789          204 KGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMS-ELEGELERRTLT  282 (336)
Q Consensus       204 ~GSqW~~LtR~~ae~vv~~~~i~~~f~~~c~~~~~~~~~~~~~~~~~~~~~~~~PDE~ffqTlL~ns-~~~~~i~~~~Lr  282 (336)
                      +|||||+|||++|++|+++....+.++++|                   +++++|||+||||||+|+ .+++.+.++++|
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~-------------------~~~~~pDE~ffqTll~n~~~~~~~~~~~~~r  215 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYF-------------------RFSLCPDESFFQTLLNNSGHFKDTIVNRNLR  215 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT--------------------TSSSGGGTHHHHH--SSGGG-B-TTTSSSE
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhh-------------------cCccCcchhhHHHhhcccchhcccccCCCEE
Confidence            999999999999999998888777777644                   368999999999999999 688889999999


Q ss_pred             EeecCCCCCCCCCCcccccccCCCCHHHHHHhH
Q 019789          283 YTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIK  315 (336)
Q Consensus       283 yidW~~~~~~~~~~hP~~f~~~d~~~~~i~~ik  315 (336)
                      ||+|+++.    ++||++|+..+++++.|+.||
T Consensus       216 ~i~W~~~~----~~~p~~~~~~~~~~~d~~~~~  244 (244)
T PF02485_consen  216 YIDWSRRG----GCHPKTLTICDLGPEDLPWLK  244 (244)
T ss_dssp             EE-BTGT-----SS---SSEEEE--GGGHHHH-
T ss_pred             EEECCCCC----CCCCCeeeeeeeCHHHHHhhC
Confidence            99999433    799999999999999999886

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=1.3e-47  Score=379.57  Aligned_cols=239  Identities=16%  Similarity=0.206  Sum_probs=189.6

Q ss_pred             CCCCeEEEEEEec-CCCChHHHHHHHHhHhcCCCeEEEEEeCCCCcccc------c-------cccCccccccccCCcce
Q 019789           57 DGPAKIAFLFLAR-RELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE------L-------TTRSKFFYGRQLSNSIQ  122 (336)
Q Consensus        57 ~~~~KiAfLilah-~~~~~~~l~~rl~~~l~~~~~~iyIHvD~k~~~~~------~-------~~~~~vf~~r~i~~rv~  122 (336)
                      ..+|||||||++| ++.++   ++||+++++++++.||||+|+++...+      .       ...+||++   +.++..
T Consensus        75 ~~~~r~AYLI~~h~~d~~~---l~RLL~aLYhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~v---l~k~~~  148 (421)
T PLN03183         75 DKLPRFAYLVSGSKGDLEK---LWRTLRALYHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYM---ITKANL  148 (421)
T ss_pred             CCCCeEEEEEEecCCcHHH---HHHHHHHhcCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEE---Eeccee
Confidence            3589999999999 66788   999999999999999999999985321      0       12457776   577889


Q ss_pred             eecCCccHHHHHHHHHHHHhcC-CCCCEEEEecCCcccCCChHH-HHHHHhcCC-CCceeccccC--C-cCccCCC----
Q 019789          123 VAWGESSMIAAERLLLEAALED-PANQRFVLLSDSCVPIYNFSY-VYKYLMASP-RSFVDSFLDR--K-ESRYNPK----  192 (336)
Q Consensus       123 V~WG~~SlV~A~l~Ll~~AL~d-~~~~~fvlLSgsd~PL~s~~~-I~~~L~~~~-~sFI~~~~~~--~-~~RY~~~----  192 (336)
                      |.|||+|||+|||++|+.+|+. .+|||||||||+||||+++++ |+.|+..+. +|||++..+.  + ..|+.+.    
T Consensus       149 V~WGG~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~p  228 (421)
T PLN03183        149 VTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDP  228 (421)
T ss_pred             eccCChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecC
Confidence            9999999999999999999984 789999999999999999999 567777765 8999975431  1 1222110    


Q ss_pred             ---C-----------CCCCCC-CccccccceeeecHHHHHHhhcccchhHHHhhhhcCCCCCcccccchhhhcccccccc
Q 019789          193 ---M-----------SPTIPK-GKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCI  257 (336)
Q Consensus       193 ---m-----------~p~ip~-~~~~~GSqW~~LtR~~ae~vv~~~~i~~~f~~~c~~~~~~~~~~~~~~~~~~~~~~~~  257 (336)
                         +           .+.+|. .++++|||||+|||++|+|++...+-.+.                  .+++++.++++
T Consensus       229 gl~~~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr------------------~ll~y~~~t~~  290 (421)
T PLN03183        229 GLYSTNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPR------------------TLLMYYTNFVS  290 (421)
T ss_pred             ceeecccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHH------------------HHHHHHhcCCC
Confidence               0           012454 78999999999999999999974311111                  12246667999


Q ss_pred             cCchHHHHHhhCCC-CCCccccCceEEeecCCCCCCCCCCcccccccCCCCHHHHHHhHhcCceeeeeccCccccc
Q 019789          258 PDEHYVQTLLAMSE-LEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVKDGYLDE  332 (336)
Q Consensus       258 PDE~ffqTlL~ns~-~~~~i~~~~LryidW~~~~~~~~~~hP~~f~~~d~~~~~i~~ik~~~~~~~~~~~~~~~~~  332 (336)
                      |||.||||+|+|++ ++++++|++||||+|+++.    +.||++|+.+|+     +++.+++.-    |||+...+
T Consensus       291 pdE~fFqTVl~NS~~f~~t~vn~nLRyI~W~~~~----~~~P~~l~~~D~-----~~l~~S~~l----FARKFd~d  353 (421)
T PLN03183        291 SPEGYFHTVICNVPEFAKTAVNHDLHYISWDNPP----KQHPHTLSLNDT-----EKMIASGAA----FARKFRRD  353 (421)
T ss_pred             CchHHHHHHHhhcccccccccCCceeEEecCCCC----CCCCcccCHHHH-----HHHHhCCCc----cccCCCCC
Confidence            99999999999998 9999999999999999874    579999998875     778887653    99987643

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.96  E-value=4.4e-28  Score=242.93  Aligned_cols=223  Identities=19%  Similarity=0.196  Sum_probs=173.4

Q ss_pred             CCCCeEEEEEEecCCCChHHHHHHHHhHhcCCCeEEEEEeCCCCcccc-------ccccCccccccccCCcceeecCCcc
Q 019789           57 DGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE-------LTTRSKFFYGRQLSNSIQVAWGESS  129 (336)
Q Consensus        57 ~~~~KiAfLilah~~~~~~~l~~rl~~~l~~~~~~iyIHvD~k~~~~~-------~~~~~~vf~~r~i~~rv~V~WG~~S  129 (336)
                      .++.-+||+.++|++.++   +++++++++++.+.++||+|.++....       ....+||+.   ++++..|.|||.|
T Consensus       100 ~~~~~~a~~~~v~kd~~~---verll~aiYhPqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~v---~~k~~~v~~~G~s  173 (439)
T KOG0799|consen  100 LKPFPAAFLRVVYKDYEQ---VERLLQAIYHPQNVYCIHVDAKSPPEFRVAMQQLASCFPNVIV---LPKRESVTYGGHS  173 (439)
T ss_pred             ccccceEEEEeecccHHH---HHHHHHHHhCCcCcceEEECCCCCHHHHHHHHHHHhcCCceEE---eccccceecCCch
Confidence            444578888999999999   999999999999999999999985331       113455554   5678999999999


Q ss_pred             HHHHHHHHHHHHhcC-CCCCEEEEecCCcccCCChHHHHHHHhc-CCCCceeccccC--CcCc--c-C---C--------
Q 019789          130 MIAAERLLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMA-SPRSFVDSFLDR--KESR--Y-N---P--------  191 (336)
Q Consensus       130 lV~A~l~Ll~~AL~d-~~~~~fvlLSgsd~PL~s~~~I~~~L~~-~~~sFI~~~~~~--~~~R--Y-~---~--------  191 (336)
                      +++|++++|+.+++- .+|+||++|||+|+||+|+.+|.+.|+. ++.|||+.....  +..|  + .   +        
T Consensus       174 ~l~a~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g~N~i~~~~~~~~~~~~~~k~~~~~~~~~~~~s~  253 (439)
T KOG0799|consen  174 ILAAHLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRGANFVEHTSEIGWKLNRKAKWDIIDLKYFRNKSP  253 (439)
T ss_pred             hhHHHHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCCcccccCcccccHHHhcccCCcccccchheecCC
Confidence            999999999999986 4799999999999999999999999998 559999863321  1111  1 1   0        


Q ss_pred             CCCCCCCC-CccccccceeeecHHHHHHhhcccchhHHHhhhhcCCCCCcccccchhhhcccccccccCchHHHHHhhCC
Q 019789          192 KMSPTIPK-GKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMS  270 (336)
Q Consensus       192 ~m~p~ip~-~~~~~GSqW~~LtR~~ae~vv~~~~i~~~f~~~c~~~~~~~~~~~~~~~~~~~~~~~~PDE~ffqTlL~ns  270 (336)
                      .+.+.+|. .++++||.|++|+|++|+|++....+...                    .+++++++.|||+||+||++|+
T Consensus       254 ~~~~~lp~~~ki~~Gs~~~~LsR~fv~y~i~~~~~~~l--------------------l~~~~~t~~~dE~f~~Tl~~n~  313 (439)
T KOG0799|consen  254 LPWVILPTALKLFKGSAWVSLSRAFVEYLISGNLPRTL--------------------LMYYNNTYSPDEGFFHTLQCNP  313 (439)
T ss_pred             CccccCCCceEEEecceeEEEeHHHHHHHhcCccHHHH--------------------HHHHhCccCcchhhhHhhhccc
Confidence            01122453 78999999999999999999998433332                    2466789999999999999999


Q ss_pred             CCCCccccCc--eEEeecCCCCCCCCCCcccccccCCC
Q 019789          271 ELEGELERRT--LTYTQWNLSTTGNQNWHPLTFSYANA  306 (336)
Q Consensus       271 ~~~~~i~~~~--LryidW~~~~~~~~~~hP~~f~~~d~  306 (336)
                       +...-..++  +|+++|+.+...+.+.||+.++..|.
T Consensus       314 -~~~~g~~~~~~lr~~~W~~~~~~~~~~~c~~~~~~~~  350 (439)
T KOG0799|consen  314 -FGMPGVFNDECLRYTNWDRKDVDPPKQHCHSLTVRDF  350 (439)
T ss_pred             -cCCCCcccchhhcceecccccccccccCCcccccccc
Confidence             666556677  99999998432223567777777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	336
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	3e-24
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score =  101 bits (251), Expect = 3e-24
 Identities = 43/301 (14%), Positives = 84/301 (27%), Gaps = 47/301 (15%)

Query: 50  TRSRIHYDGPAKIAFLFLARRELP-LDFLWGSFFEIADVENFSIFIH---SAPGFVFDEL 105
                  +    IA+  +   ++  LD L  +   I   +NF   IH    A       +
Sbjct: 74  VEPLTKEEVGFPIAYSIVVHHKIEMLDRLLRA---IYMPQNF-YCIHVDRKAEESFLAAV 129

Query: 106 TTRSKFFYG-RQLSNSIQVAWGESSMIAAERLLLEAALEDPAN-QRFVLLSDSCVPIYNF 163
              +  F      S    V +   + + A+   ++      AN +  + L     PI   
Sbjct: 130 QGIASCFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTN 189

Query: 164 SYVYKYLMASPR-SFVDSF----------------LDRKESRYNPKMSPTIPKGKWRKGS 206
             + + L  S   + +++                 +D K +      +P   K     GS
Sbjct: 190 LEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGS 249

Query: 207 QWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTL 266
            +  + R +   ++++E I     +  +                       PDE    T+
Sbjct: 250 AYFVVTREYVGYVLENENI-QKLMEWAQ-------------------DTYSPDEFLWATI 289

Query: 267 LAMSELEGELERRTLTYTQWNLSTTGNQNWHPLTFSYANAGPQQIKEIKVVDFSCFYIVK 326
             + E+ G              +      W       +N  P        V   C +   
Sbjct: 290 QRIPEVPGSFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAG 349

Query: 327 D 327
           D
Sbjct: 350 D 350

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 2e-05
 Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 84/291 (28%)

Query: 82  FEIADVE--NFSIFIHSAPGFVFD------ELTTRSKFFYGRQLSNSIQVAWGESSMIAA 133
           FE  + +     I       FV +      +   +S      ++ + I         ++ 
Sbjct: 9   FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKS-ILSKEEIDHIIM----SKDAVSG 63

Query: 134 ERLLLEAALEDPAN--QRFVLLSDSCVPIYNFSY-VYKYLMASPRSFVDSFLDRKESRYN 190
              L    L       Q+FV   +     Y F     K     P      ++++++  YN
Sbjct: 64  TLRLFWTLLSKQEEMVQKFV--EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN 121

Query: 191 -----PKMSPTIPKGKWR--------KGSQWITLIRRH-----------AEVIVDDEII- 225
                 K + +  +   +        + ++ + +                +V +  ++  
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI---DGVLGSGKTWVALDVCLSYKVQC 178

Query: 226 ---FPVF----KKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSELEGELER 278
              F +F    K C      L+  + K+  ++        D H     L +  ++ EL R
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEMLQ-KLLYQIDPNWTSRSD-HSSNIKLRIHSIQAEL-R 235

Query: 279 RTLTYTQWNLSTTGNQN--------WHPLTFSYANAGPQQIKEIKVVDFSC 321
           R L    +       +N         +              K     + SC
Sbjct: 236 RLLKSKPY-------ENCLLVLLNVQNA-------------KAWNAFNLSC 266

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 34/210 (16%)

Query: 74  LDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAA 133
           L  +W    +  DV      +H     V  +    +       L   +++     +  A 
Sbjct: 392 LSLIWFDVIKS-DVMVVVNKLHKY-SLVEKQPKESTISIPSIYLELKVKL----ENEYAL 445

Query: 134 ERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYL---MAS----------PRSFVD- 179
            R +++       N      SD  +P Y   Y Y ++   + +             F+D 
Sbjct: 446 HRSIVDHY-----NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500

Query: 180 SFLDRK----ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIF-PVFKKCCK 234
            FL++K     + +N   S      + +    +I       E +V+  + F P  ++   
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI 560

Query: 235 RRPPLDARKGKMNMKLQKQHNCIPDEHYVQ 264
                D     + + L  +   I +E + Q
Sbjct: 561 CSKYTDL----LRIALMAEDEAIFEEAHKQ 586

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	336
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=9.3e-47  Score=372.13  Aligned_cols=240  Identities=14%  Similarity=0.152  Sum_probs=184.8

Q ss_pred             CCCCCeEEEEEEecCCCChHHHHHHHHhHhcCCCeEEEEEeCCCCccc--ccc-----ccCccccccccCCcceeecCCc
Q 019789           56 YDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--ELT-----TRSKFFYGRQLSNSIQVAWGES  128 (336)
Q Consensus        56 ~~~~~KiAfLilah~~~~~~~l~~rl~~~l~~~~~~iyIHvD~k~~~~--~~~-----~~~~vf~~r~i~~rv~V~WG~~  128 (336)
                      .+.++||||||++|+++++   |++|+++++++.+.||||+|+++...  +..     ..+++++   +++++.|.|||+
T Consensus        80 ~e~~~kiAflil~h~d~~~---l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v---~~~~~~v~WGg~  153 (391)
T 2gak_A           80 EEVGFPIAYSIVVHHKIEM---LDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFV---ASQLESVVYASW  153 (391)
T ss_dssp             HHHTSCEEEEEEECSCHHH---HHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEE---CSSCCCCCTTSH
T ss_pred             cccCCCEEEEEEecCCHHH---HHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEE---eccCcccccCCc
Confidence            3456999999999999877   99999999889999999999997532  111     1345544   457999999999


Q ss_pred             cHHHHHHHHHHHHhcC-CCCCEEEEecCCcccCCChHHHHHHHhcC-CCCceeccccC--CcCccC--CC-----C----
Q 019789          129 SMIAAERLLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMAS-PRSFVDSFLDR--KESRYN--PK-----M----  193 (336)
Q Consensus       129 SlV~A~l~Ll~~AL~d-~~~~~fvlLSgsd~PL~s~~~I~~~L~~~-~~sFI~~~~~~--~~~RY~--~~-----m----  193 (336)
                      |||+|+++||+.||++ ++|+|||||||+|+||+|+++|++||+.+ ++|||+++.++  +..|+.  ..     +    
T Consensus       154 S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l~~~~  233 (391)
T 2gak_A          154 TRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTG  233 (391)
T ss_dssp             HHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGGSHHHHEEEEEETTEEEEEE
T ss_pred             hHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCcccccceEeeeeccccceeeec
Confidence            9999999999999985 59999999999999999999999999985 59999987653  234432  10     0    


Q ss_pred             --CCCCC-CCccccccceeeecHHHHHHhhcccchhHHHhhhhcCCCCCcccccchhhhcccccccccCchHHHHHhhCC
Q 019789          194 --SPTIP-KGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMS  270 (336)
Q Consensus       194 --~p~ip-~~~~~~GSqW~~LtR~~ae~vv~~~~i~~~f~~~c~~~~~~~~~~~~~~~~~~~~~~~~PDE~ffqTlL~ns  270 (336)
                        ...+| ..++++|||||+|||++|++|++|.. .+.|..                   +++++|+|||+|||||+.++
T Consensus       234 ~~k~~~P~~~~~~~GSqW~~LtR~~v~~vl~d~~-~~~~~~-------------------~~k~t~~pDE~ffqTll~~~  293 (391)
T 2gak_A          234 IVKAPPPLKTPLFSGSAYFVVTREYVGYVLENEN-IQKLME-------------------WAQDTYSPDEFLWATIQRIP  293 (391)
T ss_dssp             EECCCCSCSSCCEECCSCCEEEHHHHHHHHHCHH-HHHHHH-------------------HHTTSSSGGGTHHHHHTTST
T ss_pred             ccccCCccccceecccceeEecHHHHHHHHhCCc-HHHHHH-------------------HHcCCcCCchhHHHHHhhcc
Confidence              11235 47899999999999999999999853 455554                   45579999999999999987


Q ss_pred             CCCCcc----------ccCceEEeecCCCCCC--CCCCccc----------ccccCCCCHHHHHHhHhcCceeeeeccCc
Q 019789          271 ELEGEL----------ERRTLTYTQWNLSTTG--NQNWHPL----------TFSYANAGPQQIKEIKVVDFSCFYIVKDG  328 (336)
Q Consensus       271 ~~~~~i----------~~~~LryidW~~~~~~--~~~~hP~----------~f~~~d~~~~~i~~ik~~~~~~~~~~~~~  328 (336)
                      ++.+.+          +++++|||+|+...+.  .++.||.          +|+.+|     ++.|++++    ++|||+
T Consensus       294 ~~pg~~~~~~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~D-----l~~l~~s~----~lFARK  364 (391)
T 2gak_A          294 EVPGSFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGD-----LSWMLRQH----HLFANK  364 (391)
T ss_dssp             TSTTCCCSSGGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGG-----HHHHTTSC----CSEEEC
T ss_pred             CCCCccccccccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHH-----HHHHHhCC----CceEEc
Confidence            654432          4678999999843210  0123554          788777     47777754    459998


Q ss_pred             cc
Q 019789          329 YL  330 (336)
Q Consensus       329 ~~  330 (336)
                      ..
T Consensus       365 F~  366 (391)
T 2gak_A          365 FD  366 (391)
T ss_dssp             CC
T ss_pred             cC
Confidence            65

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	336
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	81.82

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=81.82  E-value=6.4  Score=31.98  Aligned_cols=109  Identities=12%  Similarity=0.133  Sum_probs=61.0

Q ss_pred             CeEEEEEEecCCCCh-HHHHHHHHhHhcCCCeEEEEEeCCCCccccccccCccccccccCCcceeec----------CCc
Q 019789           60 AKIAFLFLARRELPL-DFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAW----------GES  128 (336)
Q Consensus        60 ~KiAfLilah~~~~~-~~l~~rl~~~l~~~~~~iyIHvD~k~~~~~~~~~~~vf~~r~i~~rv~V~W----------G~~  128 (336)
                      |||+.+|-+++.... .+.++.+.+. ..+.+.|+|.-|.+.+-.... ...+ .   -..++++..          ...
T Consensus         1 P~vSiiip~yN~~~~l~~~l~Si~~Q-t~~~~eiivvdd~S~d~t~~~-l~~~-~---~~~~i~~~~~~~~~~~~~~~~~   74 (255)
T d1qg8a_           1 PKVSVIMTSYNKSDYVAKSISSILSQ-TFSDFELFIMDDNSNEETLNV-IRPF-L---NDNRVRFYQSDISGVKERTEKT   74 (255)
T ss_dssp             CCEEEEEEESSCTTTHHHHHHHHHTC-SCCCEEEEEEECSCCHHHHHH-HGGG-G---GSTTEEEEECCCCSHHHHHSSC
T ss_pred             CEEEEEEecCCCHHHHHHHHHHHHhC-CCCCeEEEEEECCCCccHHHH-HHHh-h---hhcccccccccccccccccccc
Confidence            789999999988764 3444444433 346789999888665311100 0000 0   011233222          222


Q ss_pred             cHHHHHHHHHHHHhcCCCCCEEEEecCCcccCCC-hHHHHHHHhcCC-CCce
Q 019789          129 SMIAAERLLLEAALEDPANQRFVLLSDSCVPIYN-FSYVYKYLMASP-RSFV  178 (336)
Q Consensus       129 SlV~A~l~Ll~~AL~d~~~~~fvlLSgsd~PL~s-~~~I~~~L~~~~-~sFI  178 (336)
                      +.-.|-=.+++.|    ..+|+++|-+.|++..+ .+.+.+++.+++ ..++
T Consensus        75 g~~~a~N~gi~~a----~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v  122 (255)
T d1qg8a_          75 RYAALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVI  122 (255)
T ss_dssp             HHHHHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEE
T ss_pred             hhccccccccccc----ccccccccccccccccchHHHHHHHHHhCCCCCeE
Confidence            3333333344443    56899999999999765 334556776665 5555