Citrus Sinensis ID: 019790

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Secondary Structure (PSIPRED)
cEEEEEccccccccEEEEEccccccccccEEEEEEEEcccHHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEEEcccccccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHccccEEEccccccHHHHHHHHHccccccEEEEccccccHHHHHHHHccccEEEEEEccccccccccHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcEEcHHHHHHHHHHHHccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccEEEEEccccccEEEEEcccccccccccEEEEEEEEccccHHHHHHccccccccccccccccEEEEEEEEEcccccccccccEEEEEEcccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccEEEEcccccHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHHHHccccEEEEEEcccHHHHHHHHccEEEEEEEEEccccccccccEccHHHHHcHcEEEccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcc
Coil and Loop (DISEMBL)
mkaivitqpgspevlqlqevedpqikddEVLIKVEATALNRadtlqrkgsypppkgaspypglecsgtilsvgknvsrwkvGDQVCALlggggyaekvavpagqvlpvpsgvslkdaaafpevACTVWSTVFmtshlspgesflvdfcsisysdvhggssgiGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFqrnlgslnidgrlfiigtqggakteLNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEknvwpaiavgkvkpvIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Flexible Loop (DISEMBL)
mkaivitqpgspevlqlqeVEDPQIKDDEVLIKVEATalnradtlqrkgsypppkgaspypGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFvarvkeetggkgvDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVqaaglrsrstenkalivseveknvwpaiavgKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Low Complexity Region (SEG)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Disordered region (IsUnstruct)
*****************************VLIKVEA*************************GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH****************
Disordered Region (DISOPRED)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Disordered Region (DISEMBL)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Disordered Region (DISPRO)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q53FA7	332	Quinone oxidoreductase PI	yes	no	0.964	0.972	0.405	7e-63
Q6AYT0	329	Quinone oxidoreductase OS	yes	no	0.946	0.963	0.337	5e-37
P11415	329	Quinone oxidoreductase OS	yes	no	0.949	0.966	0.323	7e-36
O97764	330	Zeta-crystallin OS=Bos ta	no	no	0.946	0.960	0.319	9e-36
P47199	331	Quinone oxidoreductase OS	yes	no	0.934	0.945	0.334	8e-35
Q5R4S7	329	Quinone oxidoreductase OS	no	no	0.946	0.963	0.307	1e-34
Q08257	329	Quinone oxidoreductase OS	no	no	0.946	0.963	0.304	6e-34
Q0MVN8	329	Quinone oxidoreductase OS	no	no	0.946	0.963	0.310	7e-34
Q28452	330	Quinone oxidoreductase OS	N/A	no	0.946	0.960	0.316	1e-32
P96202	2188	Phthiocerol synthesis pol	no	no	0.940	0.143	0.297	2e-32

>sp|Q53FA7|QORX_HUMAN Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2

 Score =  241 bits (614), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 198/338 (58%), Gaps = 15/338 (4%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 1   MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 60

Query: 61  PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 61  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 120

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
            PE     W T F   HL      + +  +  Y  +H G SG+GT AIQ+ +  G    V
Sbjct: 121 IPEA----WLTAFQLLHL------VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 170

Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
           TAGS++KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct: 171 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 230

Query: 240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +DGR  + G  GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +
Sbjct: 231 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 290

Query: 299 V---GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
                ++ PV+ +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 291 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 328

May be involved in the generation of reactive oxygen species (ROS). Has low NADPH-dependent beta-naphthoquinone reductase activity, with a preference for 1,2-beta-naphthoquinone over 1,4-beta-naphthoquinone. Has low NADPH-dependent diamine reductase activity (in vitro).
Homo sapiens (taxid: 9606)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -

>sp|Q6AYT0|QOR_RAT Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/338 (33%), Positives = 170/338 (50%), Gaps = 21/338 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A P
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR-KPALP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I SVG  VS +K GD+V C     GGYAE          P+P  +  +  
Sbjct: 67  YTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T    +F ++    GES LV          HG S G+G    Q+ +  G++V
Sbjct: 127 AALGIPYFTACRALFHSARARAGESVLV----------HGASGGVGLATCQIARAHGLKV 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TAGSEE   +    GA    N+K  +++ ++K   G KGVDVI++ +       +L  
Sbjct: 177 LGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKTSAGDKGVDVIIEMLANKNLSNDLKL 236

Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  GR+ ++G +G    E+N     AK  ++    L S + E       +    +   I
Sbjct: 237 LSCGGRVIVVGCRG--SIEINPRDTMAKETSIIGVSLFSSTKEE----FQQFAGILQAGI 290

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
             G VKPVI    PL +AA+AH+ ++ SS  +GK++L+
Sbjct: 291 EKGWVKPVIGSEYPLEKAAQAHEDIIHSSGKMGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|P11415|QOR_CAVPO Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1

 Score =  151 bits (382), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 168/337 (49%), Gaps = 19/337 (5%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL++Q +V  P  KD +VLIKV A  +N  +T  R G+Y        
Sbjct: 8   MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLLPY 67

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
            PG + +G + S+G +VS +K GD+V       GGYAE        V  +P  +  +  A
Sbjct: 68  TPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGA 127

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
           A      T    +F ++    GES LV          HG S G+G  A Q+ +  G++V 
Sbjct: 128 AIGIPYFTACRALFHSARAKAGESVLV----------HGASGGVGLAACQIARAYGLKVL 177

Query: 179 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
            TAG+EE   V    GA    N++   ++  +K+  G KGVDVI++ +       +L  L
Sbjct: 178 GTAGTEEGQKVVLQNGAHEVFNHRDAHYIDEIKKSIGEKGVDVIIEMLANVNLSNDLKLL 237

Query: 239 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +  GR+ I+G +G    E+N     AK  T+    L S + E      S ++      + 
Sbjct: 238 SCGGRVIIVGCRG--SIEINPRDTMAKESTISGVSLFSSTKEEFQQFASTIQ----AGME 291

Query: 299 VGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
           +G VKPVI    PL +A++AH+ ++ SS  +GK +L+
Sbjct: 292 LGWVKPVIGSQYPLEKASQAHENIIHSSGTVGKTVLL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2

 Score =  150 bits (380), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 175/338 (51%), Gaps = 21/338 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL+LQ +V  P  KD +VLIKV+A  +N  DT  R G++   K   P
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNI-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG++VS +K GD+V       GGYAE        V  +P  +  K  
Sbjct: 67  YTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T +  +  ++ + PGES LV          HG S G+G  A Q+ +  G++V
Sbjct: 127 AAIGIPYFTAYRALLHSACVKPGESVLV----------HGASGGVGIAACQIARAYGLKV 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TA +EE   +  + GA    N+K  D++ ++K+  G KGVDVI++ +       +L  
Sbjct: 177 LGTASTEEGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSNDLNL 236

Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  GR+ ++G++G    E+N      K  +++   L S + E       +    +   +
Sbjct: 237 LSHGGRVIVVGSRG--TIEINPRDTMTKESSIKGVTLFSSTKEE----FQQFAAALQAGM 290

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
            +G ++PVI     L +A +AH+ ++ SS   GK++L+
Sbjct: 291 EIGWLRPVIGPQYLLEKATQAHENIIHSSGATGKMILL 328

Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA.

Bos taurus (taxid: 9913)

>sp|P47199|QOR_MOUSE Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1

 Score =  147 bits (372), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 173/344 (50%), Gaps = 31/344 (9%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A P
Sbjct: 8   MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR-KPALP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I SVG  VS +K GD+V C     GGYAE        + P+P  ++ +  
Sbjct: 67  YTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T    +F ++    GES LV          HG S G+G    Q+ +  G++V
Sbjct: 127 AALGIPYFTACRALFHSARARAGESVLV----------HGASGGVGLATCQIARAHGLKV 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG--GKGVDVILDCMGASYFQRNL 235
             TAGSEE   +    GA    N+K  +++ ++K   G   KGVDVI++ +       +L
Sbjct: 177 LGTAGSEEGKKLVLQNGAHEVFNHKEANYIDKIKMSVGDKDKGVDVIIEMLANENLSNDL 236

Query: 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN----KALIVSEVEK 291
             L+  GR+ ++G +G    E+N     AK  ++    L S + E       L+ + +EK
Sbjct: 237 KLLSHGGRVVVVGCRG--PIEINPRDTMAKETSIIGVSLSSSTKEEFQQFAGLLQAGIEK 294

Query: 292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
                   G VKPVI    PL +AA+AH+ ++  S   GK++L+
Sbjct: 295 --------GWVKPVIGSEYPLEKAAQAHEDIIHGSGKTGKMILL 330

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1

 Score =  147 bits (370), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 173/338 (51%), Gaps = 21/338 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+LQ ++  P  KD + LIKV A  +N  +T  R G+Y   K   P
Sbjct: 8   MRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 67  YTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T +  +  ++H+  GES LV          HG S G+G  A Q+ +  G++V
Sbjct: 127 AAIGIPYFTAYRALIHSAHVKAGESVLV----------HGASGGVGLAACQIARAYGLKV 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TAG+EE   +    GA    N++  +++ ++K+  G KG+DVI++ +      ++L  
Sbjct: 177 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNKDLSL 236

Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  G++ ++G++G    E+N     AK  ++    + S + E       +    +   +
Sbjct: 237 LSHGGQVIVVGSRG--TIEINPRDTMAKESSIIGVTVFSSTKEE----FQQYAAALQAGM 290

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
            +G +KPVI    PL + AEAH+ ++  S   GK++L+
Sbjct: 291 EIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score =  144 bits (364), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 173/338 (51%), Gaps = 21/338 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y   K   P
Sbjct: 8   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 67  YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T +  +  ++ +  GES LV          HG S G+G  A Q+ +  G+++
Sbjct: 127 AAIGIPYFTAYRALIHSACVKAGESVLV----------HGASGGVGLAACQIARAYGLKI 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TAG+EE   +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  
Sbjct: 177 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 236

Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  GR+ ++G++G    E+N     AK  ++    L S + E       +    +   +
Sbjct: 237 LSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSSTKEE----FQQYAAALQAGM 290

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
            +G +KPVI    PL + AEAH+ ++  S   GK++L+
Sbjct: 291 EIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q0MVN8|QOR_PIG Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1

 Score =  144 bits (364), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 175/338 (51%), Gaps = 21/338 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M AI + + G PEV++LQ +V  P  KD++VLIKV A  +N  DT  R G++   K   P
Sbjct: 8   MSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHACGVNPVDTYIRSGTHNM-KPLLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PGL+ +G + +VG++VS +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 67  YTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYAEYALAADDTVYMLPEKLDFKQG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T    +  ++ +  GE  L+          HG S G+G  A Q+ +  G++V
Sbjct: 127 AAIGIPYFTACLALLHSACVKAGEIVLI----------HGASGGVGIAACQIARAYGLKV 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TAG+EE   +    GA    N++  +++ ++K+  G KG+DVI++ +       +L  
Sbjct: 177 LGTAGTEEGQNIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVIIEMLANVNLSNDLNL 236

Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  GR+ I+G++G    E+N      K  +++   L S + E       ++   +   +
Sbjct: 237 LSHGGRVIIVGSRG--PIEINPRDTMTKGSSIKGVALYSSTKEE----FQQLAAALQAGM 290

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
            VG ++PVI    PL +AA+AH+ ++ S    GK++L+
Sbjct: 291 EVGWLRPVIGPVYPLEKAAQAHEDIIHSRGATGKMILL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q28452|QOR_LAMGU Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1

 Score =  140 bits (354), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 171/338 (50%), Gaps = 21/338 (6%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+AI +++ G PEVL+LQ +V  P  ++ +VLIKV+A  +N  DT  R G+Y   K   P
Sbjct: 8   MRAIRVSEFGGPEVLKLQSDVAVPIPEEHQVLIKVQACGVNPVDTYIRSGTYSR-KPRLP 66

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PGL+ +G I +VG+ VS +K GD+V       GGYAE        V  +P  +  +  
Sbjct: 67  YTPGLDVAGLIEAVGERVSAFKKGDRVFTTSTVSGGYAEYALAADHTVYKLPGELDFQKG 126

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T +  +  ++    GES LV          HG S G+G  A Q+ +    +V
Sbjct: 127 AAIGVPYFTAYRALLHSACAKAGESVLV----------HGASGGVGLAACQIARACCFKV 176

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TAG+EE   V    GA    N++ +  + ++K+  G KG+DVI++ +       +L  
Sbjct: 177 LGTAGTEEGQRVVLQNGAHEVFNHREDINIDKIKKSVGEKGIDVIIEMLANVNLSNDLNL 236

Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  GR+ I+G++G    E+N      K  +++   L S + E       +    +   +
Sbjct: 237 LSQGGRVIIVGSKG--PVEINPRDTMTKESSIKGVTLFSSTKEE----FQQFAAALQAGM 290

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
            +G ++PVI    PL + A+AH+ L  SS   GK++L+
Sbjct: 291 EIGWLRPVIGSQYPLEKVAQAHEDLTHSSGAAGKVVLL 328

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Lama guanicoe (taxid: 9840)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|P96202|PPSC_MYCTU Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis GN=ppsC PE=1 SV=2

 Score =  140 bits (352), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 98/329 (29%), Positives = 164/329 (49%), Gaps = 14/329 (4%)

Query: 6    ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
            I QPG  + L + EV+  + + D+V ++V A  LN +D L+  G YP   GA+P  G EC
Sbjct: 1463 IDQPGRLDALNVHEVKRGRPQGDQVEVRVVAAGLNFSDVLKAMGVYPGLDGAAPVIGGEC 1522

Query: 66   SGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
             G + ++G  V   +VG +V A  G G +   +   A  V+P+P  ++  +AA F     
Sbjct: 1523 VGYVTAIGDEVDGVEVGQRVIAF-GPGTFGTHLGTIADLVVPIPDTLADNEAATFGVAYL 1581

Query: 126  TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 185
            T W ++     LSPGE  L+          H  + G+G  A+ + K  G R++ TAGS+ 
Sbjct: 1582 TAWHSLCEVGRLSPGERVLI----------HSATGGVGMAAVSIAKMIGARIYTTAGSDA 1631

Query: 186  KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 245
            K  +   LG +   + ++ DF   + E T G GVDV+L+ +     QR +  L   GR  
Sbjct: 1632 KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFI 1691

Query: 246  IIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP 304
             +G +   A   L + +L AK  +     L   + + +     ++ +++   +A GK++ 
Sbjct: 1692 ELGKKDVYADASLGLAAL-AKSASFSVVDL-DLNLKLQPARYRQLLQHILQHVADGKLEV 1749

Query: 305  VIYKYLPLCEAAEAHQLMESSQHIGKIML 333
            +      L +AA+A +LM S +H GKI++
Sbjct: 1750 LPVTAFSLHDAADAFRLMASGKHTGKIVI 1778

Involved in the elongation of either C22-24 fatty acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol derivatives.

Mycobacterium tuberculosis (taxid: 1773)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
224078882	325	predicted protein [Populus trichocarpa]	0.967	0.996	0.826	1e-158
357446363	325	Quinone oxidoreductase PIG3 [Medicago tr	0.967	0.996	0.808	1e-154
449443438	325	PREDICTED: quinone oxidoreductase PIG3-l	0.970	1.0	0.808	1e-153
388523009	325	unknown [Medicago truncatula]	0.967	0.996	0.802	1e-153
147863686	325	hypothetical protein VITISV_008189 [Viti	0.970	1.0	0.782	1e-151
359496322	325	PREDICTED: LOW QUALITY PROTEIN: quinone	0.970	1.0	0.782	1e-151
255560828	325	quinone oxidoreductase, putative [Ricinu	0.967	0.996	0.796	1e-151
358249074	325	uncharacterized protein LOC100813682 [Gl	0.970	1.0	0.791	1e-150
147766549	325	hypothetical protein VITISV_002784 [Viti	0.970	1.0	0.779	1e-150
357446353	325	Quinone oxidoreductase [Medicago truncat	0.967	0.996	0.790	1e-149

>gi|224078882|ref|XP_002305665.1| predicted protein [Populus trichocarpa] gi|222848629|gb|EEE86176.1| predicted protein [Populus trichocarpa]

 Score =  563 bits (1452), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/334 (82%), Positives = 298/334 (89%), Gaps = 10/334 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG PEVLQLQEVEDPQI +DEVLIKVEATALNRADTLQR+G YPPPKGASPY
Sbjct: 1   MKAVVITTPGGPEVLQLQEVEDPQINEDEVLIKVEATALNRADTLQRQGKYPPPKGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSGTI +VGKNVSRWK+GDQVCALL GGGYAEKVAVPAGQVLPVP GVSLKDAAA 
Sbjct: 61  PGLECSGTIEAVGKNVSRWKIGDQVCALLSGGGYAEKVAVPAGQVLPVPQGVSLKDAAAL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTVFM S LS GE+FLV          HGGSSGIGTFAIQ+ K QGV+VFVT
Sbjct: 121 PEVACTVWSTVFMMSRLSAGETFLV----------HGGSSGIGTFAIQIAKHQGVKVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD +GA YFQ+N+ SLNI
Sbjct: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDSVGAPYFQKNVDSLNI 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLF++G  GGA T++N+ SLFAKR+TVQAAGLR+R+ ENKA IVSEVEKNVWPAI  G
Sbjct: 231 DGRLFLLGFMGGAVTQVNLASLFAKRITVQAAGLRTRTLENKAEIVSEVEKNVWPAIVAG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           KVKPV+YKYLPL EAAE H+LMESSQHIGKI+LV
Sbjct: 291 KVKPVVYKYLPLSEAAEGHRLMESSQHIGKILLV 324

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446363|ref|XP_003593459.1| Quinone oxidoreductase PIG3 [Medicago truncatula] gi|217072752|gb|ACJ84736.1| unknown [Medicago truncatula] gi|355482507|gb|AES63710.1| Quinone oxidoreductase PIG3 [Medicago truncatula] gi|388520243|gb|AFK48183.1| unknown [Medicago truncatula]

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 270/334 (80%), Positives = 293/334 (87%), Gaps = 10/334 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT+PG PEVLQLQEV+DPQIKDDEVLIKV ATALNRADTLQRKG+YPPP+GASPY
Sbjct: 1   MKAIVITKPGEPEVLQLQEVQDPQIKDDEVLIKVHATALNRADTLQRKGAYPPPQGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I  VGKNVS+WK+GDQVCALL GGGYAEKVAV  GQVLPVP G+SLKDAA+F
Sbjct: 61  PGLECSGIIEFVGKNVSKWKIGDQVCALLAGGGYAEKVAVAEGQVLPVPPGISLKDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWST+FMTS LS GE+ L+          HGGSSGIGTFAIQ+ K  G RVFVT
Sbjct: 121 PEVACTVWSTIFMTSRLSKGETLLI----------HGGSSGIGTFAIQIAKYLGSRVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKLA CK +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN 
Sbjct: 171 AGSEEKLAFCKSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNF 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIG QGG  TEL++ +LF KRLTVQAAGLRSRS ENKA+IV+EVEKNVWPAIA G
Sbjct: 231 DGRLFIIGFQGGVSTELDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           KVKPV+YK  PL EAAEAH+LMESSQHIGKI+LV
Sbjct: 291 KVKPVVYKSFPLSEAAEAHRLMESSQHIGKILLV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443438|ref|XP_004139484.1| PREDICTED: quinone oxidoreductase PIG3-like [Cucumis sativus]

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 271/335 (80%), Positives = 295/335 (88%), Gaps = 10/335 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VI++PG  EVLQLQEV+DP I +DEVLIKVEATALNRADTLQRKG YP PKG+SPY
Sbjct: 1   MKAVVISEPGEAEVLQLQEVDDPIINEDEVLIKVEATALNRADTLQRKGFYPAPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLECSG I ++GKNVSRWKVGDQVCALL GGGYAEKVAVPAGQ+LP+P GVSLKDAA+ 
Sbjct: 61  LGLECSGIIQALGKNVSRWKVGDQVCALLSGGGYAEKVAVPAGQLLPIPPGVSLKDAASL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTVFMTS LS GE+ LV          HGGSSGIGTFAIQ+ K QG +VFVT
Sbjct: 121 PEVACTVWSTVFMTSRLSRGETLLV----------HGGSSGIGTFAIQIAKYQGAKVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKLAVCKDLGADVCINYKTEDFVARVKEET GKGVDVILD +GASYFQRNL SLN+
Sbjct: 171 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETDGKGVDVILDSVGASYFQRNLESLNL 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIGT GGA T+L+I SLFAKR TVQAAGLR+RS ENKA+IVSEVEK VWPAIA G
Sbjct: 231 DGRLFIIGTMGGAVTQLDIRSLFAKRATVQAAGLRTRSLENKAVIVSEVEKIVWPAIAAG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           KVKPVI+KYLPL +AAEAHQLMESS+HIGKI+L P
Sbjct: 291 KVKPVIFKYLPLSQAAEAHQLMESSKHIGKILLTP 325

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388523009|gb|AFK49566.1| unknown [Medicago truncatula]

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/334 (80%), Positives = 292/334 (87%), Gaps = 10/334 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT+PG PEVLQLQEV+DPQIKDDEVLIKV ATALNRADTLQRKG+YPPP+GASPY
Sbjct: 1   MKAIVITKPGEPEVLQLQEVQDPQIKDDEVLIKVHATALNRADTLQRKGAYPPPQGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I  VGKNVS+WK+GDQVCALL GGGYAEKVAV  GQVLPVP G+SLKDAA+F
Sbjct: 61  PGLECSGIIEFVGKNVSKWKIGDQVCALLAGGGYAEKVAVAEGQVLPVPPGISLKDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWST+FMTS LS GE+ L+          HGGSSGIGTFAIQ+ K  G RVFVT
Sbjct: 121 PEVACTVWSTIFMTSRLSKGETLLI----------HGGSSGIGTFAIQIAKYLGSRVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKLA CK +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN 
Sbjct: 171 AGSEEKLAFCKSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNF 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DG+LFIIG QGG  TEL++ +LF KRLTVQAAGLRSRS ENKA+IV+EVEKNVWPAIA G
Sbjct: 231 DGKLFIIGFQGGVSTELDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           KVKPV+YK  PL EAAEAH+L ESSQHIGKI+LV
Sbjct: 291 KVKPVVYKSFPLSEAAEAHRLKESSQHIGKILLV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147863686|emb|CAN83618.1| hypothetical protein VITISV_008189 [Vitis vinifera]

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/335 (78%), Positives = 292/335 (87%), Gaps = 10/335 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEA+ALNRADTLQRKG +PPPKG+SPY
Sbjct: 1   MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEASALNRADTLQRKGLHPPPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAAA 
Sbjct: 61  PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAAI 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTVFM S L+ GE+FL+          HGGSSGIGTFAIQ+ K  G RVFVT
Sbjct: 121 PEVACTVWSTVFMMSRLTAGETFLI----------HGGSSGIGTFAIQIAKYIGARVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AG+EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+
Sbjct: 171 AGNEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNV 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIG QGG   E+N++ L A+RLTVQAAGLR+RS ENKA IVSEVEKNVWPAI  G
Sbjct: 231 DGRLFIIGFQGGTVAEVNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIVAG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           KVKPV+YKY PL EAAEAHQLMESS H+GKI+L+P
Sbjct: 291 KVKPVVYKYFPLTEAAEAHQLMESSNHVGKILLIP 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496322|ref|XP_002267967.2| PREDICTED: LOW QUALITY PROTEIN: quinone oxidoreductase PIG3 [Vitis vinifera]

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/335 (78%), Positives = 292/335 (87%), Gaps = 10/335 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEA+ALNRADTLQRKG +PPPKG+SPY
Sbjct: 1   MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEASALNRADTLQRKGLHPPPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAAA 
Sbjct: 61  PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAAI 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTVFM S L+ GE+FL+          HGGSSGIGTFAIQ+ K  G RVFVT
Sbjct: 121 PEVACTVWSTVFMMSRLTAGETFLI----------HGGSSGIGTFAIQIAKYIGARVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           A +EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+
Sbjct: 171 AXNEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNV 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIG QGG   E+N++ L A+RLTVQAAGLR+RS ENKA IVSEVEKNVWPAIA G
Sbjct: 231 DGRLFIIGFQGGTVAEVNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIAAG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           KVKPV+YKY PL EAAEAHQLMESS H+GKI+L+P
Sbjct: 291 KVKPVVYKYFPLTEAAEAHQLMESSNHVGKILLIP 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560828|ref|XP_002521427.1| quinone oxidoreductase, putative [Ricinus communis] gi|223539326|gb|EEF40917.1| quinone oxidoreductase, putative [Ricinus communis]

 Score =  540 bits (1392), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/334 (79%), Positives = 289/334 (86%), Gaps = 10/334 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT  G PEVLQLQEVEDPQIKDDEVLIKV ATA+NRADTLQR G +PPPKGASPY
Sbjct: 1   MKAVVITTLGGPEVLQLQEVEDPQIKDDEVLIKVHATAVNRADTLQRLGKHPPPKGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSGTI +VGK VSRWKVGD+VCALL GGGYAEKVAVPAGQVLPVP G+SLKDA AF
Sbjct: 61  PGLECSGTIEAVGKLVSRWKVGDEVCALLSGGGYAEKVAVPAGQVLPVPPGISLKDATAF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTVFM S LS GE+FL+          HGGSSGIGTFAIQM K QGVRVF+T
Sbjct: 121 PEVACTVWSTVFMMSRLSAGETFLI----------HGGSSGIGTFAIQMAKYQGVRVFIT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGS+EKLA CK+LGADVCINY+TEDFVARVKEET GKGVDVILDCMGASY QRNL SLN+
Sbjct: 171 AGSQEKLAACKELGADVCINYRTEDFVARVKEETNGKGVDVILDCMGASYLQRNLDSLNV 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
            GRLFIIG  GGA  ELN+ SL AKRLT+QAAGLR RS+ENKA IV+EVEKNVWPAI  G
Sbjct: 231 GGRLFIIGFMGGAVAELNLASLLAKRLTLQAAGLRGRSSENKADIVNEVEKNVWPAIIEG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           K+KPV+Y   PL EAAEAH+L+ESSQHIGKI+L+
Sbjct: 291 KMKPVVYTSFPLSEAAEAHRLLESSQHIGKILLL 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249074|ref|NP_001240244.1| uncharacterized protein LOC100813682 [Glycine max] gi|255642907|gb|ACU22674.1| unknown [Glycine max]

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 265/335 (79%), Positives = 289/335 (86%), Gaps = 10/335 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT+PG PEVLQL+EVEDP + DDE+LI V AT+LNRADT QRKGSYPPPKGASPY
Sbjct: 1   MKAIVITRPGGPEVLQLEEVEDPLVGDDELLIGVHATSLNRADTFQRKGSYPPPKGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLECSGT+LS+GKNVS WK+GDQVCALL GGGYAEKVAVP GQVLPVP+GVSL DAA+F
Sbjct: 61  LGLECSGTVLSLGKNVSSWKIGDQVCALLAGGGYAEKVAVPVGQVLPVPAGVSLTDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTVFM S LS GE+ LV          HGGSSGIGTFAIQ+ K +G RVFVT
Sbjct: 121 PEVACTVWSTVFMMSRLSQGETLLV----------HGGSSGIGTFAIQIAKYRGSRVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKLA CK +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN 
Sbjct: 171 AGSEEKLAFCKSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLDSLNF 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIG QGG  T+ ++  L AKRLTVQ AGLR+RS ENKA+IVSEVEKNVWPAIA G
Sbjct: 231 DGRLFIIGFQGGVSTQADLRPLLAKRLTVQGAGLRNRSLENKAVIVSEVEKNVWPAIAEG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           KVKPV+YK  PL EAAEAHQLMESSQHIGKI+L+P
Sbjct: 291 KVKPVVYKSFPLSEAAEAHQLMESSQHIGKILLLP 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147766549|emb|CAN76421.1| hypothetical protein VITISV_002784 [Vitis vinifera]

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 261/335 (77%), Positives = 289/335 (86%), Gaps = 10/335 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VIT PG P+VLQ+QEVE+P+I D+EVLI+VEATALNRADTLQRKG YP PKG+SPY
Sbjct: 1   MKAVVITTPGDPQVLQVQEVENPEIGDNEVLIRVEATALNRADTLQRKGLYPSPKGSSPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSG I +VGK V RWKVGDQVCALL GGGYAEKV+VPAGQVLPVPSGVSLKDAA  
Sbjct: 61  PGLECSGIIEAVGKAVVRWKVGDQVCALLAGGGYAEKVSVPAGQVLPVPSGVSLKDAAGI 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEVACTVWSTV M S L+ GE+FL+          HGGSSGIGTFAIQ+ K  G RVFVT
Sbjct: 121 PEVACTVWSTVLMMSRLTAGETFLI----------HGGSSGIGTFAIQIAKYIGARVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AG+EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD +G +YFQRN+ SLN+
Sbjct: 171 AGNEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDNIGGAYFQRNIDSLNV 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIG QGG   E+N++ L A+RLTVQAAGLR+RS ENKA IVSEVEKNVWPAI  G
Sbjct: 231 DGRLFIIGFQGGTVAEVNLSGLLARRLTVQAAGLRNRSLENKAAIVSEVEKNVWPAIVAG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           KVKPV+YKY PL EAAEAHQLMESS H+GKI+L+P
Sbjct: 291 KVKPVVYKYFPLTEAAEAHQLMESSNHVGKILLIP 325

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446353|ref|XP_003593454.1| Quinone oxidoreductase [Medicago truncatula] gi|355482502|gb|AES63705.1| Quinone oxidoreductase [Medicago truncatula]

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/334 (79%), Positives = 290/334 (86%), Gaps = 10/334 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVIT PG PEVLQLQEV+DPQ KD+EVLI+V ATALN ADT+QRKG YP P+GASPY
Sbjct: 1   MKAIVITTPGGPEVLQLQEVQDPQPKDNEVLIRVHATALNSADTVQRKGFYPIPQGASPY 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PGLECSGTI+ VG NVS+WK+GDQVCALL GGGYAEKVAVP GQVLPVP G+SLKDAA+F
Sbjct: 61  PGLECSGTIVCVGINVSKWKIGDQVCALLAGGGYAEKVAVPEGQVLPVPPGISLKDAASF 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
            EVACTVWST+FMTS LS GE+ LV          HGGSSGIGTFAIQ+ K QG +VFVT
Sbjct: 121 TEVACTVWSTIFMTSRLSKGETLLV----------HGGSSGIGTFAIQIAKYQGSKVFVT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKLA CK +GADV INYKTEDFVARVKEETGG+GVDVILDCMGASY+QRNL SLN 
Sbjct: 171 AGSEEKLAFCKSIGADVGINYKTEDFVARVKEETGGQGVDVILDCMGASYYQRNLASLNF 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRLFIIG QGG  TE+++ +LF KRLTVQAAGLRSRS ENKA+IV+EVEKNVWPAIA G
Sbjct: 231 DGRLFIIGFQGGVSTEVDLRALFGKRLTVQAAGLRSRSPENKAVIVAEVEKNVWPAIAEG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           KVKPV+YK  PL EAAEAH+LMESSQHIGKI+LV
Sbjct: 291 KVKPVVYKSFPLSEAAEAHRLMESSQHIGKILLV 324

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2119682	325	AT4G21580 [Arabidopsis thalian	0.964	0.993	0.750	1.2e-129
UNIPROTKB|P72043	328	Rv3777 "Oxidoreductase" [Mycob	0.955	0.975	0.523	7.2e-84
TIGR_CMR|SPO_0231	327	SPO_0231 "alcohol dehydrogenas	0.955	0.978	0.486	2.2e-73
TIGR_CMR|SO_0640	332	SO_0640 "alcohol dehydrogenase	0.955	0.963	0.424	3.1e-67
UNIPROTKB|F1NUE4	337	TP53I3 "Uncharacterized protei	0.940	0.934	0.421	2.1e-61
UNIPROTKB|Q53FA7	332	TP53I3 "Quinone oxidoreductase	0.964	0.972	0.414	3.5e-59
UNIPROTKB|Q0VC75	332	TP53I3 "Uncharacterized protei	0.964	0.972	0.399	7.3e-59
UNIPROTKB|E2RR83	332	TP53I3 "Uncharacterized protei	0.964	0.972	0.402	1.9e-58
UNIPROTKB|F1SDJ3	332	TP53I3 "Uncharacterized protei	0.964	0.972	0.393	8.4e-58
TIGR_CMR|GSU_2637	328	GSU_2637 "alcohol dehydrogenas	0.961	0.981	0.401	8.4e-58

TAIR|locus:2119682 AT4G21580 [Arabidopsis thaliana (taxid:3702)]

 Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
 Identities = 250/333 (75%), Positives = 277/333 (83%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             MKAIVI++PG PEVLQL++V DP++KDDEVLI+V ATALNRADTLQR G Y PP G+SPY
Sbjct:     1 MKAIVISEPGKPEVLQLRDVADPEVKDDEVLIRVLATALNRADTLQRLGLYNPPPGSSPY 60

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              GLECSGTI SVGK VSRWKVGDQVCALL GGGYAEKV+VPAGQ+ P+P+G+SLKDAAAF
Sbjct:    61 LGLECSGTIESVGKGVSRWKVGDQVCALLSGGGYAEKVSVPAGQIFPIPAGISLKDAAAF 120

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
             PEVACTVWSTVFM   LS GESFL+          HGGSSGIGTFAIQ+ K  GVRVFVT
Sbjct:   121 PEVACTVWSTVFMMGRLSVGESFLI----------HGGSSGIGTFAIQIAKHLGVRVFVT 170

Query:   181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             AGS+EKLA CK+LGADVCINYKTEDFVA+VK ET GKGVDVILDC+GA Y Q+NL SLN 
Sbjct:   171 AGSDEKLAACKELGADVCINYKTEDFVAKVKAETDGKGVDVILDCIGAPYLQKNLDSLNF 230

Query:   241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
             DGRL IIG  GGA  E+ ++SL  KRLTV  A LR RS ENKA++V EVEKNVWPAI  G
Sbjct:   231 DGRLCIIGLMGGANAEIKLSSLLPKRLTVLGAALRPRSPENKAVVVREVEKNVWPAIEAG 290

Query:   301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             KVKPVIYKYLPL +AAE H LMESS HIGKI+L
Sbjct:   291 KVKPVIYKYLPLSQAAEGHSLMESSNHIGKILL 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009610 "response to symbiotic fungus" evidence=RCA

UNIPROTKB|P72043 Rv3777 "Oxidoreductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
 Identities = 176/336 (52%), Positives = 219/336 (65%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M+A+V     S + L  QEV D      EVLIKV A+ +NRAD LQ  G YPPP G S  
Sbjct:     4 MRAVVAE---SSDRLVWQEVPDVSAGPGEVLIKVAASGVNRADVLQAAGKYPPPPGVSDI 60

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              GLE SG + +VG  V+ W  G +VCALL GGGYAE VAVPA QVLP+P  V+L D+AA 
Sbjct:    61 IGLEVSGIVAAVGPGVTEWSAGQEVCALLAGGGYAEYVAVPADQVLPIPPSVNLVDSAAL 120

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
             PEVACTVWS + MT+HL PG+  L+          HGG+SGIG+ AIQ+ +    RV +T
Sbjct:   121 PEVACTVWSNLVMTAHLRPGQLVLI----------HGGASGIGSHAIQVVRALAARVAIT 170

Query:   181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             AGS EKL +C+DLGA + INY+ EDFVAR+K+ET G G D+ILD MGASY  RN+ +L  
Sbjct:   171 AGSPEKLELCRDLGAQITINYRDEDFVARLKQETDGSGADIILDIMGASYLDRNIDALAT 230

Query:   241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN---KALIVSEVEKNVWPAI 297
             DG+L +IG QGG K ELN+  L  KR  V    LR+R       KA I   V  +VWP I
Sbjct:   231 DGQLIVIGMQGGVKAELNLGKLLTKRARVIGTTLRARPVSGPHGKAAIAQAVAASVWPMI 290

Query:   298 AVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             A  +V+PVI   LP+ +AA+AH+LM S +  GKI+L
Sbjct:   291 AANRVRPVIGTRLPIQQAAQAHELMLSGKTFGKILL 326

GO:0005886 "plasma membrane" evidence=IDA

TIGR_CMR|SPO_0231 SPO_0231 "alcohol dehydrogenase, zinc-containing" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 162/333 (48%), Positives = 204/333 (61%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M+A+ I++PG PEVLQL +   P+    +VLIKV    +NR D LQR G+Y PP GAS  
Sbjct:     5 MRAVEISRPGGPEVLQLTQRPRPEPGHGQVLIKVAYAGVNRPDALQRAGAYDPPPGASDL 64

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
             PGLECSG +++VG       VGD+VCALL GGGYA+ V  PA   LPVP G++L++AA  
Sbjct:    65 PGLECSGEVVAVGPGAEDVAVGDKVCALLPGGGYADYVVTPAAHCLPVPQGMALREAACL 124

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
             PE   TVWS VF    L  GE FLV          HGGSSGIGT AIQ+    G RVF T
Sbjct:   125 PETFFTVWSNVFTRGGLKAGERFLV----------HGGSSGIGTTAIQLAHAFGARVFAT 174

Query:   181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             AGS++K   C DLGA+  INY+ EDFV  ++ E GG   D+ILD +G  Y  RN+ +L  
Sbjct:   175 AGSDDKCRACLDLGAERAINYRDEDFVKVMRSE-GG--ADLILDMVGGDYIPRNVKALAE 231

Query:   241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
             DGRL  I    G   ELN   +  KRLT+  + LR +S   KA I  ++ + VWP +  G
Sbjct:   232 DGRLVQIAFLQGPVVELNFALMMVKRLTLTGSTLRPQSDLAKADIARDLREAVWPLLDAG 291

Query:   301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             ++ PV+     L +AA AH  MESS HIGKI+L
Sbjct:   292 RIAPVMDSEFDLGDAAAAHARMESSGHIGKIVL 324

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

TIGR_CMR|SO_0640 SO_0640 "alcohol dehydrogenase, zinc-containing" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 140/330 (42%), Positives = 197/330 (59%)

Query:     4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
             I I QPG+PEV+QL     P +   +VLI+V A  +N  D  QR G+YPPP GAS   GL
Sbjct:    11 IHIEQPGAPEVMQLSRSSLPVVGAGQVLIRVSAAGVNGPDLKQRAGAYPPPPGASLILGL 70

Query:    64 ECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
             E +G I ++G+ V++W++GD+VCAL+ GGGY E     A   LP+P G S+  AAA PE 
Sbjct:    71 EVAGEICALGEGVTQWQLGDKVCALVPGGGYGEYTLTYAAHCLPIPKGFSMVQAAALPET 130

Query:   124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183
               TVW  +FM + L  GE+ L+          HGGS GIG+ AI +    G +V  T G 
Sbjct:   131 FFTVWGNLFMRAGLKAGETVLI----------HGGSGGIGSTAIALANRLGAKVIATTGQ 180

Query:   184 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 243
             +EK   C  LGAD+ +NY +++FV  V   T GKGV+V+ D  G  +   NL SL +DGR
Sbjct:   181 DEKRDYCLGLGADLVVNYNSQNFVEEVMSFTQGKGVNVVFDIAGGDFINLNLQSLALDGR 240

Query:   244 LFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK 303
             +  + TQ   K E+NI  L AKR+    + LR ++ E KA I  ++ + VWP +   ++ 
Sbjct:   241 MVSVSTQRSPKAEVNILQLMAKRIVWTGSTLRPQTVEAKAEIARQLRERVWPLLDSQQIV 300

Query:   304 PVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             P I+   PL +A +AH+LM+S +H GK++L
Sbjct:   301 PHIFATYPLIDAPKAHRLMQSGEHRGKVVL 330

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

UNIPROTKB|F1NUE4 TP53I3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 139/330 (42%), Positives = 193/330 (58%)

Query:     9 PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGT 68
             PG PE L ++EV  P   + EVL+KV A+ALNRAD LQR+G YPPPKG+S   GLE +G+
Sbjct:    11 PGGPENLYVKEVMKPHPGEGEVLVKVSASALNRADLLQRRGKYPPPKGSSDILGLEAAGS 70

Query:    69 ILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV 127
             +  +G   + RWK+GD V ALL GGG AE V VP G ++PVP  ++   AAA PE   T 
Sbjct:    71 VAGLGPGCTGRWKIGDAVMALLSGGGQAEYVTVPEGHLMPVPKDMTFIQAAAIPEAWLTA 130

Query:   128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 187
             +  +     +  GE+ L+          H G+SG+G  AIQ+ +       VTAG++EKL
Sbjct:   131 FQLLHFVGKIQKGETVLI----------HAGASGVGMAAIQLVRLANAIPIVTAGTQEKL 180

Query:   188 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 247
                 + GA    NYK EDF  +V   T G GVD+ILDC+G SY+++NL  L  DGR  I 
Sbjct:   181 QATTNAGAAAGFNYKNEDFSEKVLAFTQGSGVDIILDCVGGSYWEKNLSCLRTDGRWVIY 240

Query:   248 GTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK---VK 303
             G   G +   ++ + L +KR ++  + LRSR  E K  +V    +NV P  + G    ++
Sbjct:   241 GLLSGGEVHGDLLARLLSKRGSIHTSLLRSRDKEYKEQLVKAFIENVLPYFSGGASPHLQ 300

Query:   304 PVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             P +    PL E  EAH+ ME S++IGKI++
Sbjct:   301 PFVDSVYPLHEIVEAHRKMEESKNIGKIVI 330

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0070402 "NADPH binding" evidence=IEA

UNIPROTKB|Q53FA7 TP53I3 "Quinone oxidoreductase PIG3" [Homo sapiens (taxid:9606)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 140/338 (41%), Positives = 198/338 (58%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct:     1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 60

Query:    61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct:    61 LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
              PE     W T F   HL  G     D+  I     H G SG+GT AIQ+ +  G    V
Sbjct:   121 IPEA----WLTAFQLLHLV-GNVQAGDYVLI-----HAGLSGVGTAAIQLTRMAGAIPLV 170

Query:   180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
             TAGS++KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct:   171 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 230

Query:   240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
             +DGR  + G  GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +
Sbjct:   231 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 290

Query:   299 V-G--KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
               G  ++ PV+ +  P+ E  EAH+ ME++++IGKI+L
Sbjct:   291 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 328

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0003960 "NADPH:quinone reductase activity" evidence=IDA

GO:0048038 "quinone binding" evidence=IDA

GO:0006739 "NADP metabolic process" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

UNIPROTKB|Q0VC75 TP53I3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 135/338 (39%), Positives = 199/338 (58%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L L+EV  P   + EVL+KV A+ALNRAD LQR+G Y PP GAS  
Sbjct:     1 MIAVHFDKPGGPENLYLKEVAKPSPGEGEVLLKVAASALNRADLLQRQGQYAPPPGASNI 60

Query:    61 PGLECSGTILSVGKNVSR-WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG +  +G      W+VGD    LL GGG A+ V VPA  ++P+P+G+++  AAA
Sbjct:    61 LGLEASGHVAELGAGCQGPWRVGDPAMVLLSGGGQAQYVTVPAELLMPIPAGLTMCQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
              PE   T +  + +  ++  G+S L+          H G+SG+GT AIQ+ +  G    V
Sbjct:   121 IPEAWLTAFQLLHLVGNVQAGDSVLI----------HAGASGVGTAAIQLARMAGATPLV 170

Query:   180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
             TAGS+EKL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct:   171 TAGSQEKLQIAEKLGAAAGFNYKEEDFSEATLKLTKGAGVNLILDCIGGSYWEKNVNCLA 230

Query:   240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
             +DG   + G  GGA     + S L  KR ++  + LR R  + K ++V    + + P  +
Sbjct:   231 LDGHWVLYGLLGGAVISGPLFSKLLFKRGSLITSLLRPRDKKYKQMLVKAFTEQILPHFS 290

Query:   299 V-G--KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
               G  ++ PV+ +  P+ E  EAH+ ME+++++GKI+L
Sbjct:   291 TEGPQRLLPVLDRVYPVAEIQEAHEYMETNKNVGKIVL 328

GO:0070402 "NADPH binding" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RR83 TP53I3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 136/338 (40%), Positives = 194/338 (57%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L L+EV  P   + EVL+KV A+ALNRAD LQR+G Y PP GAS  
Sbjct:     1 MLAVHFDEPGGPENLYLKEVAKPSPVEGEVLLKVAASALNRADLLQRQGRYAPPPGASSI 60

Query:    61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG I  +G      WK+GD    LL GGG A+ V VP   ++P+P+G++L  AAA
Sbjct:    61 LGLEASGHIAELGPACQGHWKIGDPAMVLLPGGGQAQYVTVPEELLMPIPAGLTLSQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
              PE   T +  + +  ++  G+S L+          H G+SG+GT AIQ+ +  G    V
Sbjct:   121 IPEAWLTAFQLLHLLGNVQAGDSVLI----------HAGASGVGTAAIQLARMAGAIPLV 170

Query:   180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
             TAGS+ KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct:   171 TAGSQHKLQMAEKLGAAAGFNYKEEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 230

Query:   240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
             +DGR  + G  GG      + S L  KR ++    LRSR  + K  +V    +++ P  +
Sbjct:   231 LDGRWILYGLMGGTDISGPLFSKLLFKRGSLITTLLRSRDKKYKQTLVEAFTEHILPHFS 290

Query:   299 VG---KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
                  ++ PV+ +  P+    EAH  MES+Q++GKI+L
Sbjct:   291 TESPQRLLPVLDRVYPVTAIQEAHAYMESNQNVGKIVL 328

GO:0070402 "NADPH binding" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1SDJ3 TP53I3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 133/338 (39%), Positives = 197/338 (58%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             M A+   +PG PE L L+EV  P   + EVL+KV A+ALNRAD LQR+G Y PP GA   
Sbjct:     1 MLAVHFDKPGGPENLHLKEVAKPSPGEGEVLLKVVASALNRADLLQRQGHYAPPPGACNI 60

Query:    61 PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
              GLE SG ++ +G      WK+GD    LL GGG A+ V VP G ++P+P+G+++  AAA
Sbjct:    61 LGLEASGHVVELGPGCQGHWKIGDPAMVLLPGGGQAQYVTVPEGFLMPIPAGLTMLQAAA 120

Query:   120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
              PE   T +  + +  ++  G+S L+          H GSSG+GT AIQ+ +  G    V
Sbjct:   121 IPEAWLTAFQLLHLLGNVQAGDSVLI----------HAGSSGVGTAAIQLARMAGAIPLV 170

Query:   180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
             TAGS+ KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct:   171 TAGSQHKLQMAEKLGAAAGFNYKEEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 230

Query:   240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
             +DGR  + G  GGA     + S L  KR ++  + LRSR  + K ++V    + + P  +
Sbjct:   231 LDGRWVLYGLMGGADVSGPLFSKLLFKRGSLITSLLRSRDKKYKQMLVKSFTEQILPHFS 290

Query:   299 VG---KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             +    ++ PV+ +   + E   AH  ME+++++GKI+L
Sbjct:   291 MESPHRLVPVLDRVYAMTEIQAAHVYMETNRNMGKIVL 328

GO:0070402 "NADPH binding" evidence=IEA

GO:0048038 "quinone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0003960 "NADPH:quinone reductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

TIGR_CMR|GSU_2637 GSU_2637 "alcohol dehydrogenase, zinc-containing" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
 Identities = 135/336 (40%), Positives = 192/336 (57%)

Query:     1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             MKA+++   G  +VL++ E E P+  + +VL+KV AT++NR D +QR+G YPPP G S  
Sbjct:     1 MKAVLLDGFGGLDVLKVGEAERPKPAEGQVLVKVVATSVNRPDLVQREGKYPPPPGDSEI 60

Query:    61 PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
              GLE SGTI  +G  V+ W+VGD+V +L+GGGGYAE     A  ++ +P  +S ++AA  
Sbjct:    61 LGLEVSGTIEELGPGVTGWQVGDRVMSLVGGGGYAEYAVAYASHLMRIPESMSFEEAACV 120

Query:   121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC--QGVRVF 178
              E   T +  VFM   L    S ++          HGG  G+ T  IQ+ K      ++ 
Sbjct:   121 CESYITAFLNVFMIGGLKDNNSVIL----------HGGGGGVNTAGIQLCKALVPNTKIV 170

Query:   179 VTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
              TA    K+   K LGAD+ +++ +T DF   VKE T  KGVDVILD +GA Y   N+ S
Sbjct:   171 ATA-HPSKIDRVKALGADLVVDFTQTPDFSEAVKEFTNKKGVDVILDHVGAKYLAPNMNS 229

Query:   238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
             L   GRL IIG   G K ELN+  +  KR  +  + LRSR  ++K  IV+E  +   P  
Sbjct:   230 LAYAGRLVIIGVISGIKAELNLALMMVKRQQIIGSVLRSRPVKDKGEIVAEFTRTALPKF 289

Query:   298 AVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             A   + P+I K  P+ +  EAH++ME  +H GKI+L
Sbjct:   290 ADRTIVPIIEKVFPMDQVVEAHRMMEEDKHFGKIVL 325

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6AYT0	QOR_RAT	1, ., 6, ., 5, ., 5	0.3372	0.9462	0.9635	yes	no
Q53FA7	QORX_HUMAN	1, ., -, ., -, ., -	0.4053	0.9641	0.9728	yes	no
P47199	QOR_MOUSE	1, ., 6, ., 5, ., 5	0.3343	0.9343	0.9456	yes	no
P40783	QOR_SALTY	1, ., 6, ., 5, ., 5	0.3108	0.9373	0.9602	yes	no
P11415	QOR_CAVPO	1, ., 6, ., 5, ., 5	0.3234	0.9492	0.9665	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	1.6.5.5	LOW CONFIDENCE prediction!
3rd Layer	1.6.5	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0093007001	hypothetical protein (325 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.28930002	annotation not avaliable (211 aa)	•					•		•	0.493

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	0.0
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-174
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-114
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	1e-107
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-91
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-89
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	4e-85
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	5e-81
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	5e-75
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-72
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	8e-72
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-71
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	6e-66
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	8e-64
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	4e-58
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-55
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	8e-55
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-54
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-54
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-54
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-53
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	2e-52
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	6e-52
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-49
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-48
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-45
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	1e-44
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-44
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	6e-41
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-40
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	8e-38
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-37
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-36
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-36
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	4e-35
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	5e-35
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-34
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	3e-33
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	7e-33
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	4e-32
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	5e-32
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-31
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	5e-30
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	9e-30
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	4e-29
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-28
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	2e-28
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-28
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	3e-27
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-26
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	4e-26
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	5e-26
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-25
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-25
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	2e-25
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-24
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	3e-24
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	3e-23
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	9e-23
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	3e-22
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-22
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	1e-21
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-21
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	2e-21
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	6e-21
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	1e-20
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-19
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	5e-19
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-18
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	6e-18
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	1e-17
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	3e-17
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	1e-16
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-16
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	3e-16
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	3e-15
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	7e-15
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	7e-15
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	7e-15
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	5e-14
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	5e-14
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-13
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-13
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-13
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	3e-13
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	9e-13
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	9e-13
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-12
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-11
cd08294	329	cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun	2e-11
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-10
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	3e-10
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-09
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	6e-09
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	7e-09
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-08
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	1e-08
TIGR02825	325	TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy	3e-08
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	3e-08
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	4e-08
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-07
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	6e-07
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-06
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	6e-06
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	7e-06
PLN03154	348	PLN03154, PLN03154, putative allyl alcohol dehydro	9e-06
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-05
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-05
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	2e-05
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-05
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	3e-05
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	4e-05
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	2e-04
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	4e-04
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	4e-04
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.001

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  535 bits (1382), Expect = 0.0
 Identities = 191/333 (57%), Positives = 232/333 (69%), Gaps = 10/333 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVI +PG PEVL+L EV  P     EVLI+V A  +NRAD LQR+G YPPP GAS  
Sbjct: 1   MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE +G +++VG  V+ WKVGD+VCALL GGGYAE V VPAGQ+LPVP G+SL +AAA 
Sbjct: 61  LGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAAL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PEV  T W  +F    L  GE+ L+          HGG+SG+GT AIQ+ K  G RV  T
Sbjct: 121 PEVFFTAWQNLFQLGGLKAGETVLI----------HGGASGVGTAAIQLAKALGARVIAT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGSEEKL  C+ LGADV INY+TEDF   VKE TGG+GVDVILD +G  Y  RNL +L  
Sbjct: 171 AGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAP 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGRL +IG  GGAK EL++  L  KRLT+  + LRSRS E KA + +   ++VWP  A G
Sbjct: 231 DGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +++PVI K  PL EAAEAH+ MES++HIGKI+L
Sbjct: 291 RIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  486 bits (1253), Expect = e-174
 Identities = 195/334 (58%), Positives = 236/334 (70%), Gaps = 10/334 (2%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI IT+PG PEVL L EV  P  K  EVLI+V A  +NR D LQR G YPPP GAS  
Sbjct: 1   MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE +G +++VG+ VSRWKVGD+VCAL+ GGGYAE VAVPAGQVLPVP G+SL +AAA 
Sbjct: 61  LGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAAL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PE   TVWS +F    L  GE+ L+          HGG+SGIGT AIQ+ K  G RVF T
Sbjct: 121 PETFFTVWSNLFQRGGLKAGETVLI----------HGGASGIGTTAIQLAKAFGARVFTT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGS+EK A C+ LGAD+ INY+ EDFV  VK ETGGKGVDVILD +G SY  RN+ +L +
Sbjct: 171 AGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALAL 230

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           DGR+  IG QGG K EL++  L AKRLT+  + LR+R    KA I +E+ ++VWP +A G
Sbjct: 231 DGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASG 290

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           +V+PVI K  PL +AA+AH LMES  HIGKI+L 
Sbjct: 291 RVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLT 324

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  333 bits (855), Expect = e-114
 Identities = 139/335 (41%), Positives = 199/335 (59%), Gaps = 12/335 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ +   G  +VL++ E   P  K ++VLIKV A  +NRADTLQR+G YPPP G+S  
Sbjct: 2   MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE +G +  VG +V R+K GD+V ALL GGGYAE      G V+ +P G + ++AAA 
Sbjct: 62  LGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAI 121

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PE   T W  +     +  G+S L          +H G+SG+GT A Q+ +  G    +T
Sbjct: 122 PEAFLTAWQLLKKHGDVKKGQSVL----------IHAGASGVGTAAAQLAEKYGAATIIT 171

Query: 181 AGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
             SEEK+  CK L A + I Y  E  F  +VK+ TG KGV+++LDC+G SY       L 
Sbjct: 172 TSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLA 231

Query: 240 IDGRLFIIGTQGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +DG+  + G  GGAK E  N+  L  KR ++  + LRSRS E KA +V+  E+ V P + 
Sbjct: 232 VDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYME 291

Query: 299 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
            G++KP++ +  PL E AEAH  +E +++IGK++L
Sbjct: 292 EGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVL 326

Length = 334

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  315 bits (809), Expect = e-107
 Identities = 145/341 (42%), Positives = 201/341 (58%), Gaps = 21/341 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V+ + G PEVL++ EV +P+    EVL++V+A  +N  D L R+G  PP +     
Sbjct: 1   MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDA 117
           PG E +G +++VG  V+ +KVGD+V AL G    GGYAE V VPA  ++P+P G+S ++A
Sbjct: 61  PGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEA 120

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA P    T W  +F  + L PGE+ LV          HG + G+G+ AIQ+ K  G  V
Sbjct: 121 AALPLAGLTAWLALFDRAGLKPGETVLV----------HGAAGGVGSAAIQLAKALGATV 170

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
                S EKL + K+LGAD  INY+ EDFV +V+E TGGKGVDV+LD +G   F  +L +
Sbjct: 171 VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA 230

Query: 238 LNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 296
           L   GRL  IG   GG    LN+  L  KRLT++   L SR  E     ++E    ++  
Sbjct: 231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPE----ALAEALAELFDL 286

Query: 297 IAVGKVKPVIYKYLPLCE--AAEAHQLMESSQHIGKIMLVP 335
           +A GK+KPVI +  PL E  AA AH L+E  +  GK++L  
Sbjct: 287 LASGKLKPVIDRVYPLAEAPAAAAHLLLE-RRTTGKVVLKV 326

Length = 326

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  275 bits (705), Expect = 2e-91
 Identities = 126/337 (37%), Positives = 186/337 (55%), Gaps = 19/337 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY---PPPKGA 57
           MKA+V  + G PE L L+EV        EV I+VEA  +N  D L  +G Y   PP    
Sbjct: 1   MKAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPL--- 57

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            P+ PG E +G + +VG+ V+ +KVGD+V AL G GG+AE+V VPA  V P+P G+S ++
Sbjct: 58  -PFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEE 116

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
           AAA P    T +  +   + L PGE+ LV           G + G+G  A+Q+ K  G R
Sbjct: 117 AAALPVTYGTAYHALVRRARLQPGETVLV----------LGAAGGVGLAAVQLAKALGAR 166

Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V   A SEEKLA+ + LGAD  I+Y+  D   RVK  TGG+GVDV+ D +G   F+ +L 
Sbjct: 167 VIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLR 226

Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 296
           SL   GRL +IG   G   ++    L  K ++V      + +     L+ + + + ++  
Sbjct: 227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAE-LFDL 285

Query: 297 IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +A GK++P +    PL +AAEA + +   +  GK++L
Sbjct: 286 LAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL 322

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  269 bits (691), Expect = 3e-89
 Identities = 119/337 (35%), Positives = 174/337 (51%), Gaps = 20/337 (5%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
           KA+ I + G PEVL+ ++V  P+    EVL++  A  +N  DT  R G YP P    P+ 
Sbjct: 1   KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL---PFV 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            G+E +G + +VG  V+ +KVGD+V      G YAE   VPA +++ +P G+S + AAA 
Sbjct: 58  LGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAAL 117

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
                T    +  T  + PG++ LV          H  + G+G    Q  K  G  V  T
Sbjct: 118 LLQGLTAHYLLRETYPVKPGDTVLV----------HAAAGGVGLLLTQWAKALGATVIGT 167

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             SEEK  + +  GAD  INY+ EDFV RV+E TGG+GVDV+ D +G   F+ +L SL  
Sbjct: 168 VSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRP 227

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS--RSTENKALIVSEVEKNVWPAIA 298
            G L   G   G     ++  L    L +    L     + E      +E    ++ A+A
Sbjct: 228 RGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAE----LFDAVA 283

Query: 299 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
            GK+K  I K  PL +AA+AH+ +ES +  GK++L+P
Sbjct: 284 SGKLKVEIGKRYPLADAAQAHRDLESRKTTGKLLLIP 320

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  260 bits (666), Expect = 4e-85
 Identities = 133/362 (36%), Positives = 199/362 (54%), Gaps = 47/362 (12%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+VI   G PEVL+  ++ +P+   DEVL++V+A ALN  D   R+G           
Sbjct: 1   MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLG---GGG 93
            G + +G + +VG  V+  K G +V                     CA   +LG    GG
Sbjct: 61  LGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGG 120

Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153
           YAE VAVPA  +LP+P  +S ++AAA P    T W  +   + L PGE+ LV        
Sbjct: 121 YAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLV-------- 172

Query: 154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213
             HG  SG+G+ AIQ+ K  G  V  TAGSE+KL   K+LGAD  I+Y+ EDFV  V+E 
Sbjct: 173 --HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVREL 230

Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
           TG +GVDV+++ +GA+ ++++L SL   GRL   G   G +  +++  +F ++L++  + 
Sbjct: 231 TGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGST 290

Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           + +++  ++AL +          +  GK+KPVI    PL EAAEAH+ +ES +  GKI+L
Sbjct: 291 MGTKAELDEALRL----------VFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVL 340

Query: 334 VP 335
            P
Sbjct: 341 TP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  249 bits (637), Expect = 5e-81
 Identities = 119/341 (34%), Positives = 179/341 (52%), Gaps = 22/341 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+AI   + G+P+VL+L ++  P     EVL++V A+ +N  DT  R G+YP      PY
Sbjct: 1   MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGL-PPLPY 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
            PG + +G + +VG+ V   KVGD+V     G     G  AE V VPA Q++P+P GVS 
Sbjct: 60  VPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSF 119

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG 174
           +  AA    A T +  +F  +    GE+ LV          HGGS  +G  A+Q+ +  G
Sbjct: 120 EQGAALGIPALTAYRALFHRAGAKAGETVLV----------HGGSGAVGHAAVQLARWAG 169

Query: 175 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234
            RV  TA S E   + +  GAD   NY+ ED   R+   T G+GVDVI++ +      ++
Sbjct: 170 ARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKD 229

Query: 235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 294
           L  L   GR+ + G+ GG +  + I  L AK  +++   L + + E +A     +     
Sbjct: 230 LDVLAPGGRIVVYGS-GGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIA---- 284

Query: 295 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
             +A G ++PVI +  PL EAA AH+ +ES   IGK++L P
Sbjct: 285 AGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  233 bits (597), Expect = 5e-75
 Identities = 117/343 (34%), Positives = 166/343 (48%), Gaps = 23/343 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+   Q G PEVL+++E+  P     EVLI+VEA  LNRAD + R+G+Y  P      
Sbjct: 1   MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPAR 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC----ALLG-GGGYAEKVAVPAGQVLPVPSGVSLK 115
            G E +G + +VG  V+ + VGD+V     A LG  G YAE   VPA  V+ +P G+S  
Sbjct: 61  LGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFV 120

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV 175
           +AAA      T +  +   + L PG+S L+             SS +G  AIQ+    G 
Sbjct: 121 EAAALWMQYLTAYGALVELAGLRPGDSVLIT----------AASSSVGLAAIQIANAAGA 170

Query: 176 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235
            V  T  + EK      LGA   I    ED VA V   TGGKGVDV+ D +G   F +  
Sbjct: 171 TVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLA 230

Query: 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA---AGLRSRSTENKALIVSEVEKN 292
            +L   G L + G   G  T   + +   K LT +      +       +  I   ++  
Sbjct: 231 DALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD-- 288

Query: 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
               +A G +KPV+ +  P  +  EAH+ +ES Q IGKI++ P
Sbjct: 289 ---GLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  227 bits (580), Expect = 3e-72
 Identities = 121/361 (33%), Positives = 184/361 (50%), Gaps = 51/361 (14%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASPY 60
           +A+V+T  G  + L++++   P+    EV ++VEA  LN AD + R+G Y   PK   P+
Sbjct: 1   RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKP--PF 58

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            PG EC+GT+ +VG+ V  +KVGD+V  L   GGYAE V VPA QV P+P G+S ++AAA
Sbjct: 59  VPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAA 118

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQGVRVF 178
           FP    T +  +F   +L PG+S L          VH  + G+G  A Q+ K    V V 
Sbjct: 119 FPVNYLTAYYALFELGNLRPGQSVL----------VHSAAGGVGLAAGQLCKTVPNVTVV 168

Query: 179 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
            TA S  K    K+ G    I+Y+T+D+V  VK+ +  +GVD++LD +G    +++   L
Sbjct: 169 GTA-SASKHEALKENGVTHVIDYRTQDYVEEVKKIS-PEGVDIVLDALGGEDTRKSYDLL 226

Query: 239 NIDGRLFIIG----TQGG-------AKTELNITSLFAKRLTVQAAGLRSRSTENKAL--- 284
              GRL + G      G        AK   N   +   +L           +ENK++   
Sbjct: 227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLI----------SENKSVLGF 276

Query: 285 ----------IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
                     +++EV   +      GK+KP I    P  E  EA + ++S ++IGK++L 
Sbjct: 277 NLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLT 336

Query: 335 P 335
           P
Sbjct: 337 P 337

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  224 bits (574), Expect = 8e-72
 Identities = 112/338 (33%), Positives = 166/338 (49%), Gaps = 34/338 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+ I + G PEVL+L +V  P+    EVL+KV A  +N  D   R+G        +  
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 61  --PGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLK 115
             PG + +G +++VG  V+ +KVGD+V  +     GG YAE V VPA ++   P+ +S +
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFE 120

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV 175
           +AAA P    T W  +F    L  G++ L          +HG + G+G+FA+Q+ K +G 
Sbjct: 121 EAAALPLAGLTAWQALFELGGLKAGQTVL----------IHGAAGGVGSFAVQLAKARGA 170

Query: 176 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235
           RV  TA S       + LGAD  I+Y   DF           GVD +LD +G     R+L
Sbjct: 171 RVIATA-SAANADFLRSLGADEVIDYTKGDFE----RAAAPGGVDAVLDTVGGETLARSL 225

Query: 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 295
             +   GRL  I     A+       + A  + V+  G      E  A +   VE     
Sbjct: 226 ALVKPGGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDG------EQLAELAELVEA---- 275

Query: 296 AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
               GK++PV+ +  PL +AAEAH+ +ES    GK++L
Sbjct: 276 ----GKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  225 bits (575), Expect = 1e-71
 Identities = 111/353 (31%), Positives = 175/353 (49%), Gaps = 43/353 (12%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA  ++  G  + L+L E   P+    EVL++V A +LN  D L   G YPPP      
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCAL------------------LGG---GGYAEKVA 99
           P  + +G +++VG+ V+R+KVGD+V                     LGG   G  AE V 
Sbjct: 61  PLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVV 120

Query: 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS 159
           +P   ++  P  +S ++AA  P    T W+ +F    L PG++ LV            G+
Sbjct: 121 LPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLV-----------QGT 169

Query: 160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKG 218
            G+  FA+Q  K  G RV  T+ S+EKL   K LGAD  INY+T  D+   V + TGG+G
Sbjct: 170 GGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG 229

Query: 219 VDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 278
           VD +++  G     +++ ++   G + +IG   G +  + +  L  K  T++   + SR+
Sbjct: 230 VDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRA 289

Query: 279 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331
            + +A+           AI   +++PVI +  P  EA EA++ +ES  H GK+
Sbjct: 290 -QFEAMNR---------AIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  210 bits (537), Expect = 6e-66
 Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 37/347 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V+   G PEV +L+EV  PQ    +VL++V A+ +N  DT  R+G         P 
Sbjct: 1   MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR---PPL 57

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGV 112
           P   G + +G + +VG+ V+R++VGD+V    GG     G  AE   V A  +   P+ +
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANL 117

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172
           S+++AAA P V  T W  +   + +  G++ L          +HGG+ G+G  A+Q+ K 
Sbjct: 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVL----------IHGGAGGVGHVAVQLAKA 167

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 232
            G RV+ TA S EK A  + LGAD  I Y  E  V  V E TGG+G DV+ D +G     
Sbjct: 168 AGARVYATASS-EKAAFARSLGADP-IIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLD 225

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL-----IVS 287
            +  ++ + GR+  I          ++  L  +  T             +       I+ 
Sbjct: 226 ASFEAVALYGRVVSILG----GATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILR 281

Query: 288 EVEKNVWPAIAVGKVKPVI-YKYLPLCEAAEAHQLMESSQHIGKIML 333
           E  +     +  G+++P++  +  PL EAA AH  +ES    GKI++
Sbjct: 282 EAAR----LVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVI 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  204 bits (522), Expect = 8e-64
 Identities = 115/342 (33%), Positives = 164/342 (47%), Gaps = 39/342 (11%)

Query: 4   IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASP 59
           +V T+ GSPEVL L EVE   P  K  EVL+KV A ++N  D   R+G       +   P
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            PG++ +G +++VG  V+R+KVGD+V   L   GGG  AE V  P   +   P GVS ++
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEE 120

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
           AAA P    T    +     + PG+  L++          G S G+GTFA+Q+ K  G  
Sbjct: 121 AAALPVAGLTALQALRDAGKVKPGQRVLIN----------GASGGVGTFAVQIAKALGAH 170

Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF--QRN 234
           V     S     + + LGAD  I+Y TEDFVA      GG+  DVI D +G S F   R 
Sbjct: 171 VTGVC-STRNAELVRSLGADEVIDYTTEDFVA---LTAGGEKYDVIFDAVGNSPFSLYRA 226

Query: 235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV- 293
             +L   GR   +   GG  + L +  L          G   R    K  +     +++ 
Sbjct: 227 SLALKPGGRYVSV---GGGPSGLLLVLLLLPLT---LGGGGRRL---KFFLAKPNAEDLE 277

Query: 294 ----WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331
                  +  GK+KPVI    PL +A EA++ ++S +  GK+
Sbjct: 278 QLAEL--VEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKV 317

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  188 bits (481), Expect = 4e-58
 Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 17/308 (5%)

Query: 28  DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA 87
           DEV ++V+A  LN  D L   G  P         GLECSG +  VG  V+  KVGD+V  
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGD---ETPLGLECSGIVTRVGSGVTGLKVGDRVMG 57

Query: 88  LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
            L  G +A  V V A  V+ +P  +S ++AA  P    T +  +   + L  GES L   
Sbjct: 58  -LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVL--- 113

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINY-KTED 205
                  +H  + G+G  AIQ+ +  G  VF T GSEEK    ++LG  V  I   +   
Sbjct: 114 -------IHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFSSRDLS 166

Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
           F   +   TGG+GVDV+L+ +     + +   L   GR   IG +            F +
Sbjct: 167 FADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRPFLR 226

Query: 266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS 325
            ++  +  L   + E   L+  E+ + V   +  G +KP+    +P     +A +LM+S 
Sbjct: 227 NVSFSSVDLDQLARERPELL-RELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSG 285

Query: 326 QHIGKIML 333
           +HIGK++L
Sbjct: 286 KHIGKVVL 293

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  182 bits (464), Expect = 3e-55
 Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 26/340 (7%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAIVI QPG PEVL+L+E+  P+ K   VLI+V+A  LNR++   R+G  P  K     
Sbjct: 1   MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFP-RV 59

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSGVSL 114
            G+E  G +         +  G +V   +GG      G YAE   VP  QV  + S +S 
Sbjct: 60  LGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSW 117

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG 174
            + AA PE   T W ++F +  L PG++ L          + GG+S +G  A+++ K  G
Sbjct: 118 AELAALPETYYTAWGSLFRSLGLQPGDTLL----------IRGGTSSVGLAALKLAKALG 167

Query: 175 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234
             V  T  S E+ A+ K+LGAD  +         +++      G D +L+ +G +  + +
Sbjct: 168 ATVTATTRSPERAALLKELGADEVV-IDDGAIAEQLRAA--PGGFDKVLELVGTATLKDS 224

Query: 235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 294
           L  L   G + + G  GG  T  +   +      V      S S +     + E+     
Sbjct: 225 LRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFD--- 281

Query: 295 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
             +A G +     K     E  EAH  MES++  GK++++
Sbjct: 282 -FVAAGHLDIPPSKVFTFDEIVEAHAYMESNRAFGKVVVL 320

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  181 bits (462), Expect = 8e-55
 Identities = 110/339 (32%), Positives = 167/339 (49%), Gaps = 26/339 (7%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ +PG+   L L+E+E P     EVL+KV A  LN  D        P      P+
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWS--YPH 58

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            PG++ +G +++VG  V+ WKVGD+V    +L  GG +AE   V A  VLP+P  +S ++
Sbjct: 59  VPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEE 118

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
           AAA P    T +  +F    +  G + L+           GG+ G+G+FA+Q+ K  G+R
Sbjct: 119 AAALPCAGLTAYQALFKKLRIEAGRTILI----------TGGAGGVGSFAVQLAKRAGLR 168

Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V  T  S+      K LGAD  I+Y  ED   R+KE TGG+GVD +LD +G         
Sbjct: 169 VITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAP 227

Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ----AAGLRSRSTENKALIVSEVEKN 292
           +L  +G L  I  QG    + +    F + L+V      A            +    E+ 
Sbjct: 228 TLAFNGHLVCI--QGR--PDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEE- 282

Query: 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331
           +   +A GK++P++ + LP  +  EA + ++     GKI
Sbjct: 283 LLELLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKI 321

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  179 bits (457), Expect = 1e-54
 Identities = 95/280 (33%), Positives = 136/280 (48%), Gaps = 36/280 (12%)

Query: 29  EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88
           EVL++VEA  L   D   R+G YPPP       G E +G ++ VG  V+  KVGD+V  L
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 89  LGG-----------------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
                                     GG+AE V VPA  ++P+P G+SL++AA  PE   
Sbjct: 61  PNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLA 120

Query: 126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 185
           T +  +     L PG++ LV            G+ G+G  A Q+ K  G RV VT  S+E
Sbjct: 121 TAYHALRRAGVLKPGDTVLV-----------LGAGGVGLLAAQLAKAAGARVIVTDRSDE 169

Query: 186 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRL 244
           KL + K+LGAD  I+YK ED    ++  TGG G DV++D +G      + L  L   GR+
Sbjct: 170 KLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRI 228

Query: 245 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 284
            ++G   G     ++  L  K LT+  +   +R    +AL
Sbjct: 229 VVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEAL 268

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score =  179 bits (458), Expect = 1e-54
 Identities = 95/309 (30%), Positives = 141/309 (45%), Gaps = 29/309 (9%)

Query: 32  IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG 91
           I+V A  LN  D L   G YP         G EC+G +  VG  V+   VGD+V  L   
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPGEAV----LGGECAGVVTRVGPGVTGLAVGDRVMGL-AP 55

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
           G +A +V   A  V+P+P G S ++AA  P V  T +  +   + L PGES L       
Sbjct: 56  GAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAYYALVDLARLRPGESVL------- 108

Query: 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVCINYKTEDFVAR 209
              +H  + G+G  AIQ+ +  G  VF TAGS EK    + LG   D   + +   F   
Sbjct: 109 ---IHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSFADE 165

Query: 210 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELN-----ITSLFA 264
           +   TGG+GVDV+L+ +   +   +L  L   GR   IG     K ++        + F 
Sbjct: 166 ILRATGGRGVDVVLNSLSGEFLDASLRCLAPGGRFVEIG-----KRDIRDNSQLAMAPFR 220

Query: 265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 324
             ++  A  L     E    I  E+   V    A G ++P+     P+ +A +A + M+ 
Sbjct: 221 PNVSYHAVDL-DALEEGPDRI-RELLAEVLELFAEGVLRPLPVTVFPISDAEDAFRYMQQ 278

Query: 325 SQHIGKIML 333
            +HIGK++L
Sbjct: 279 GKHIGKVVL 287

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  180 bits (458), Expect = 3e-54
 Identities = 113/362 (31%), Positives = 169/362 (46%), Gaps = 60/362 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA ++ +P  P  LQ++EV DP+    EVLIKV+A  +   D L  KG +P  +G  P 
Sbjct: 1   MKAAILHKPNKP--LQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP--RGKYPL 56

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV---------------------C---ALLGG---G 92
             G E  GT+  VG+ V R+K GD+V                     C   A  G    G
Sbjct: 57  ILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDG 116

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           G+AE V VP   ++ +P  VS + AA    V  T    +     +  G++ LV       
Sbjct: 117 GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAG-VKKGDTVLVT------ 169

Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
               G   G+G  AIQ+ K  G RV     S EKL + K+LGAD  I+     F   VK+
Sbjct: 170 ----GAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVID--GSKFSEDVKK 223

Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA 272
                G DV+++ +G+   + +L SLN  GRL +IG        L    L  K + +  +
Sbjct: 224 LG---GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGS 280

Query: 273 GLRSRSTENKAL-IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331
              +++   +AL +V E           GK+KPVI + + L +  EA + ++S + +G+I
Sbjct: 281 ISATKADVEEALKLVKE-----------GKIKPVIDRVVSLEDINEALEDLKSGKVVGRI 329

Query: 332 ML 333
           +L
Sbjct: 330 VL 331

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  177 bits (451), Expect = 1e-53
 Identities = 97/319 (30%), Positives = 154/319 (48%), Gaps = 22/319 (6%)

Query: 21  EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVS 77
           E       EV I+V A +LN  D L  +G YP      PYP   G E SG + +VG +V+
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP---TMPPYPFTPGFEASGVVRAVGPHVT 57

Query: 78  RWKVGDQVCALLGG--GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
           R  VGD+V A  G   GG+A  V VP  QV+  P+ +S ++A A P V  TV    F  +
Sbjct: 58  RLAVGDEVIAGTGESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDA-FARA 116

Query: 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA 195
            L+ GE  L+             + G G  A+Q+ + +G  ++ TA S++KL   K LG 
Sbjct: 117 GLAKGEHILI----------QTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGV 166

Query: 196 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT 255
              INY  EDF   +   TGG+GVDV+++ +     Q+ L  L   GR   I      K+
Sbjct: 167 PHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMT-ALKS 225

Query: 256 ELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 314
             ++  S+ +   +  +  LR     +   I     + V   +  G+++P + +  P  +
Sbjct: 226 APSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMV-SLVEEGELRPTVSRIFPFDD 284

Query: 315 AAEAHQLMESSQHIGKIML 333
             EA++ +   ++IGK+++
Sbjct: 285 IGEAYRYLSDRENIGKVVV 303

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  175 bits (447), Expect = 2e-52
 Identities = 113/367 (30%), Positives = 163/367 (44%), Gaps = 65/367 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+++EV  P+    EVLIKVEA  +   D    KG +P PK   P 
Sbjct: 4   MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKL--PL 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV--------------C----------ALLGG---- 91
            PG E  GT++ VG+ V+  KVGD+V              C            + G    
Sbjct: 60  IPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTD 119

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
           GGYAE V VPA  V+ +P G+ L +AA       T +  +   +++ PG+   V      
Sbjct: 120 GGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKK-ANVKPGKWVAVV----- 173

Query: 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211
                 G+ G+G  A+Q  K  G  V     SEEKL + K LGAD  IN    D +  VK
Sbjct: 174 ------GAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVK 227

Query: 212 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQ 270
           E       D I+D +G +  + +L +L   G L ++G   GG    L    L  K +++ 
Sbjct: 228 EI-----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIV 282

Query: 271 --AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 328
               G R+   E                   GK+KP I + +PL E  EA++ ME  +  
Sbjct: 283 GSLVGTRADLEEALDFAAE------------GKIKPEILETIPLDEINEAYERMEKGKVR 330

Query: 329 GKIMLVP 335
           G+ ++  
Sbjct: 331 GRAVIDM 337

Length = 339

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  174 bits (443), Expect = 6e-52
 Identities = 103/346 (29%), Positives = 176/346 (50%), Gaps = 27/346 (7%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            + +V+T+ G PEVL++ E + P+    EV++KVEA+ ++ AD   R+G YP        
Sbjct: 1   NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFT 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG +  G + ++G  V+ ++VGD+V AL   GG AE + + A  ++PVP GV   +A   
Sbjct: 61  PGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCL 120

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
                T +  +   + +  G+  L          +HG S G+G   +++    G  V+ T
Sbjct: 121 VLNYVTAYQMLHRAAKVLTGQRVL----------IHGASGGVGQALLELALLAGAEVYGT 170

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           A SE   A  ++LGA   I+Y+T+D++  +       GVDV+ D +G   ++ +  +L  
Sbjct: 171 A-SERNHAALRELGA-TPIDYRTKDWLPAMLTP---GGVDVVFDGVGGESYEESYAALAP 225

Query: 241 DGRLFIIG----TQGGAKTELNITSLFAKRLTVQAAGLRSRST-----ENKALIVSEVEK 291
            G L   G       G ++   + SL A+   ++      R+T      ++A       +
Sbjct: 226 GGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQ 285

Query: 292 NVW---PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           ++      +A GK++P I K LPL E AEAH+L+ES + +GKI+L+
Sbjct: 286 DLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVLL 331

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  167 bits (425), Expect = 2e-49
 Identities = 109/340 (32%), Positives = 163/340 (47%), Gaps = 21/340 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASP 59
           M+AI + + G PEVL  ++V DP     +V I V A  ++  DT  R G  P P     P
Sbjct: 1   MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELP 60

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKD 116
           Y PG E +G + +VG  V    +G +V A  G  GGGYAE        + PVP G+ L+ 
Sbjct: 61  YVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEA 120

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
           A A      T    +   + L+PG+  LV             + G+G+  +Q+ K  G  
Sbjct: 121 AVAVVHDGRTA-LGLLDLATLTPGDVVLVT----------AAAGGLGSLLVQLAKAAGAT 169

Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V   AG   K A+ + LGADV ++Y   D+  +V+E  GG GV V+LD +G +  +  L 
Sbjct: 170 VVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALA 229

Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ-AAGLRSRSTENKALIVSEVEKNVWP 295
            L   GR    G   G  T L+      + +TV    G+++     +AL    +      
Sbjct: 230 LLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALA----- 284

Query: 296 AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
             A G++ PV+ +  PL  AAEAH  +E+   +GK++L+P
Sbjct: 285 EAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  164 bits (417), Expect = 3e-48
 Identities = 98/335 (29%), Positives = 139/335 (41%), Gaps = 16/335 (4%)

Query: 4   IVITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASP 59
           +V TQ G P   VL+L  +  P     EVL+++ A  +N +D +   G+Y   PP  A P
Sbjct: 1   VVYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVP 60

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
             G E  G ++ VG  VS   VG +V  L G G + E V  PA  ++PVP  +S + AA 
Sbjct: 61  --GNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAM 118

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
                 T W  +     L PG+  + +            +S +G   IQ+ K  G +   
Sbjct: 119 LYINPLTAWLMLTEYLKLPPGDWVIQN----------AANSAVGRMLIQLAKLLGFKTIN 168

Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
               +E++   K LGAD  I+   ED   RVKE TGG G  + LD +G     R   SL 
Sbjct: 169 VVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLR 228

Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
             G L   G   G       +    K +TV+   LR            E    V   +  
Sbjct: 229 PGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEA 288

Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           G +   +    PL +  EA    E     GK++L 
Sbjct: 289 GVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score =  157 bits (398), Expect = 2e-45
 Identities = 112/339 (33%), Positives = 158/339 (46%), Gaps = 19/339 (5%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K I   + G PEVLQ  E       ++EV ++ +A  +N  DT  R G YPPP   S   
Sbjct: 3   KRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGL- 61

Query: 62  GLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           G E +G +  VG  V   KVGD+V  A    G Y+    VPA +   +P  +S + AAA 
Sbjct: 62  GTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAAS 121

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
                TV+  +  T  + P E FL           H  + G+G  A Q  K  G ++  T
Sbjct: 122 FLKGLTVYYLLRKTYEIKPDEQFLF----------HAAAGGVGLIACQWAKALGAKLIGT 171

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
            GS +K    K  GA   INY+ E+ V RVKE TGGK V V+ D +G   ++ +L  L  
Sbjct: 172 VGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQR 231

Query: 241 DGRLFIIGTQGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
            G +   G   G  T +N+  L  K  L V    L+   T  + L  +E    ++  IA 
Sbjct: 232 RGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEASNELFSLIAS 289

Query: 300 GKVK---PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           G +K       K+ PL +A  AH+++ES    G  +L+P
Sbjct: 290 GVIKVDVAEQQKF-PLKDAQRAHEILESRATQGSSLLIP 327

Length = 327

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  155 bits (394), Expect = 1e-44
 Identities = 79/243 (32%), Positives = 114/243 (46%), Gaps = 33/243 (13%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V+T PG   ++ + +V  P+   DEVL+KV+A ALN  D   +   + P   A   
Sbjct: 1   QKAAVLTGPGGGLLV-VVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPA--I 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVPSGV 112
            G + +GT++ VG  V+R+KVGD+V   + G        G + E V   A     +P  +
Sbjct: 58  LGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNI 117

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHL----------SPGESFLVDFCSISYSDVHGGSSGI 162
           S ++AA  P    T    +F    L          S G+  L          + GGSS +
Sbjct: 118 SFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVL----------IWGGSSSV 167

Query: 163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 222
           GT AIQ+ K  G +V  TA S +   + K LGAD   +Y   D V  ++  TGGK +   
Sbjct: 168 GTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGK-LRYA 225

Query: 223 LDC 225
           LDC
Sbjct: 226 LDC 228

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  154 bits (392), Expect = 3e-44
 Identities = 111/372 (29%), Positives = 154/372 (41%), Gaps = 66/372 (17%)

Query: 1   MKAIVITQPGSPEVLQ-LQEVEDPQI-KDDEVLIKVEATALNRADTLQRKG--------- 49
           MKA  I   G  + L  L+    P I K ++VLIKV A ++N  D L R G         
Sbjct: 1   MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKK 60

Query: 50  SYPPPKGASPY-----PGLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVP 101
             P     S        G +CSG ++ +G  V  +++GD+V   +     G +AE V VP
Sbjct: 61  RKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVP 120

Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVDFCSISYSDVHG 157
             +V   P  +S ++AA+ P    T WS +     L+P    G+  L+           G
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLI----------LG 170

Query: 158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 217
           GS G+GTFAIQ+ K  G  V  T  S + + + K LGAD  I+Y  EDF   + E     
Sbjct: 171 GSGGVGTFAIQLLKAWGAHVTTTC-STDAIPLVKSLGADDVIDYNNEDFEEELTERG--- 226

Query: 218 GVDVILDCMG------ASYFQRNLGSL---------NIDGRLFIIGTQGGAKTELNIT-- 260
             DVILD +G      A    +  G+          N D    + G    A   L     
Sbjct: 227 KFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVK 286

Query: 261 SLFAKRLTVQAAGLRSRST-ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH 319
           SL             S S  +  A +V +           GK+KPVI K  P  E  EA+
Sbjct: 287 SLLKGSHYRWGFFSPSGSALDELAKLVED-----------GKIKPVIDKVFPFEEVPEAY 335

Query: 320 QLMESSQHIGKI 331
           + +ES    GK 
Sbjct: 336 EKVESGHARGKT 347

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  145 bits (369), Expect = 6e-41
 Identities = 102/379 (26%), Positives = 157/379 (41%), Gaps = 73/379 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVED---PQIKDDEVLIKVEATALNRADTLQRKGSY-----P 52
           M+A+++T  G  +  +L   +D   P     EVLI+V A  +N  D   R+G Y      
Sbjct: 1   MRAVLLTGHGGLD--KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDG 58

Query: 53  PPKGASPY--------------PGLECSGTILSVGKNVSRWKVGDQV------------- 85
                                  G +  G +++VG+ V   ++G++V             
Sbjct: 59  ATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDD 118

Query: 86  ---CALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST---VFMTSH 136
                 +G    GG+AE   VPA    PV S +S  + A FP      +ST   +   + 
Sbjct: 119 PADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP----CSYSTAENMLERAG 174

Query: 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 196
           +  GE+ LV           G S G+G+  +Q+ K +G  V   AG   K    + LGAD
Sbjct: 175 VGAGETVLVT----------GASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVRALGAD 223

Query: 197 VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE 256
             I            +  GG+ VDV+ D +G   F   L  L   GR    G   G   E
Sbjct: 224 TVILRDAPLLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVE 281

Query: 257 LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA 316
           L++ +L+ K LT+  + L +R          EV + +   I  G+++PV+ K  PL E  
Sbjct: 282 LDLRTLYLKDLTLFGSTLGTR----------EVFRRLVRYIEEGEIRPVVAKTFPLSEIR 331

Query: 317 EAHQLMESSQHIGKIMLVP 335
           EA       +H+GK++LVP
Sbjct: 332 EAQAEFLEKRHVGKLVLVP 350

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  143 bits (363), Expect = 4e-40
 Identities = 107/374 (28%), Positives = 168/374 (44%), Gaps = 72/374 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR---KGSYPPPKGA 57
           MKA+V+T PG    L+ +++  P+    EVL+KV+A  +  +D + R    G+Y PP   
Sbjct: 1   MKALVLTGPG---DLRYEDIPKPEPGPGEVLVKVKACGICGSD-IPRYLGTGAYHPPL-- 54

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQV---------------------CA---LLGG-- 91
               G E SGT+  VG  V    VGD+V                     C+    +G   
Sbjct: 55  --VLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRR 112

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            G +AE V+VPA  ++ +P  V   + AA  E A      V +   ++ G++ +V    I
Sbjct: 113 DGAFAEYVSVPARNLIKIPDHVDY-EEAAMIEPAAVALHAVRLA-GITLGDTVVV----I 166

Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                  G+  IG  AIQ  K  G  RV      +EKLAV ++LGAD  IN K ED V +
Sbjct: 167 -------GAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEK 218

Query: 210 VKEETGGKGVDVILDCMGASYFQRN-LGSLNIDGRLFIIGTQGG--AKTELNITSLFAKR 266
           V+E T G+G D++++  G+       L      G++ ++G   G    +E     +  K 
Sbjct: 219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKE 278

Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWP----AIAVGK--VKPVIYKYLPLCEAAEAHQ 320
           LT+Q +              +    + W      +A GK  V+P+I   LPL +   A +
Sbjct: 279 LTIQGSW---------NSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFE 329

Query: 321 LM-ESSQHIGKIML 333
            + +  +  GK++L
Sbjct: 330 RLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  136 bits (345), Expect = 8e-38
 Identities = 101/304 (33%), Positives = 138/304 (45%), Gaps = 52/304 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V T PG   V +L+EV +P+    EVLIKV A  +  +D    KG Y P +     
Sbjct: 1   MKALVKTGPGPGNV-ELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVE----T 55

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV----------------------CA---LLG-- 90
           P   G E SGTI+ VG +V  WKVGD+V                      C     +G  
Sbjct: 56  PVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ 115

Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             GG+AE V VP   +  +P  +SL +AAA  E        V   S + PG++ +V    
Sbjct: 116 ADGGFAEYVLVPEESLHELPENLSL-EAAALTEPLAVAVHAVAERSGIRPGDTVVVF--- 171

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EEKLAVCKDLGADVCINYKTEDFV 207
                   G   IG  A Q+ K QG  V V      E +L V K+LGAD  +N   ED  
Sbjct: 172 --------GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA-VNGGEEDLA 222

Query: 208 ARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 266
             V E T G G DV+++C GA    ++ L  L   GR+  +G  G     +++  +  K 
Sbjct: 223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKE 282

Query: 267 LTVQ 270
           L+V 
Sbjct: 283 LSVI 286

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  136 bits (344), Expect = 2e-37
 Identities = 102/363 (28%), Positives = 171/363 (47%), Gaps = 69/363 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD--TLQRKGSYPPPKGAS 58
           MKA+V  + G  E L++++V+DP+    EVLI+V+   +N  D   +      P P    
Sbjct: 1   MKALVFEKSGI-ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPH--- 56

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV----------CALL----------GG------- 91
             PG E +G +  VG +V   K GD+V          C +           GG       
Sbjct: 57  -IPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSN 115

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
           GGYAE + VP   +  +P  +S + AA+ P  A T +  +     L PGE+ +V      
Sbjct: 116 GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAG-LGPGETVVV------ 168

Query: 152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211
                G S   G FA+Q+ K  G  V   +  +      K+ GAD  ++Y  ++   +VK
Sbjct: 169 ----FGASGNTGIFAVQLAKMMGAEVIAVSRKD----WLKEFGADEVVDY--DEVEEKVK 218

Query: 212 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 271
           E T  K  DV+++ +G+S++  +L  L   GRL   GT  G + +L+++ L++K++++  
Sbjct: 219 EIT--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIG 276

Query: 272 A--GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 329
           +  G R    E     + ++ K++       KVK  ++K   L EA EA + + S +  G
Sbjct: 277 STGGTRKELLE-----LVKIAKDL-------KVK--VWKTFKLEEAKEALKELFSKERDG 322

Query: 330 KIM 332
           +I+
Sbjct: 323 RIL 325

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  134 bits (340), Expect = 1e-36
 Identities = 103/365 (28%), Positives = 163/365 (44%), Gaps = 58/365 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G  +  ++++V  P+    EVL+K+EA+ +   D     G +P        
Sbjct: 1   MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------C----------------ALLGG----G 92
            G E +G +++VG  VS  KVGD+V        C                    G    G
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDG 119

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVDFCS 149
            +AE     A  V P+P G+S + AA    + C   TV+  +   + L PG     D+  
Sbjct: 120 TFAEYAIADARYVTPIPDGLSFEQAAP---LLCAGVTVYKAL-KKAGLKPG-----DWVV 170

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
           IS     G   G+G   +Q  K  G+RV      +EKL + K+LGAD  +++K  D V  
Sbjct: 171 IS-----GAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEA 225

Query: 210 VKEETGGKGVD-VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 268
           VKE TGG G   V++  + A+ +++ L  L   G L  +G   G    L+   L  + +T
Sbjct: 226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGIT 285

Query: 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 328
           +  + + +R    +AL  +          A GKVKP I    PL +  E  + ME  +  
Sbjct: 286 IVGSLVGTRQDLQEALEFA----------ARGKVKPHIQVV-PLEDLNEVFEKMEEGKIA 334

Query: 329 GKIML 333
           G++++
Sbjct: 335 GRVVV 339

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  133 bits (338), Expect = 2e-36
 Identities = 105/372 (28%), Positives = 162/372 (43%), Gaps = 69/372 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+  P     ++L+EV  P+    EVL+KV A  +   D  + +G +   K     
Sbjct: 1   MKAAVLHGPN---DVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLK-PPRI 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA------------LLG---------------GGG 93
            G E +G I+ VG  V+ +KVGD+V              L G                GG
Sbjct: 57  LGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGG 116

Query: 94  YAEKVAVPA-----GQVLPVPSGVSLKDAAAFPEVACTV--WSTVFMTSHLSPGESFLVD 146
           +AE V VPA     G VL +P  VS ++AA    +AC +         + + PG++ LV 
Sbjct: 117 FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQR----KAGIKPGDTVLVI 172

Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                      G+  IG     + K  G  +V V+  +E +L   K LGAD  I+   ED
Sbjct: 173 -----------GAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED 221

Query: 206 FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGR-LFIIGTQGGAKTELNITSLF 263
            V +V+E T G+G DV++   G+     + L  +   GR LF  G   G+   ++   + 
Sbjct: 222 LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIH 281

Query: 264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQL 321
            + +T+  +   S     +AL +          IA GK  VK +I    PL +  EA +L
Sbjct: 282 YREITITGSYAASPEDYKEALEL----------IASGKIDVKDLITHRFPLEDIEEAFEL 331

Query: 322 MESSQHIGKIML 333
               + + KI++
Sbjct: 332 AADGKSL-KIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  130 bits (329), Expect = 4e-35
 Identities = 101/374 (27%), Positives = 160/374 (42%), Gaps = 63/374 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G    ++L+E   P     +VLI+V AT +  +D    +G  P        
Sbjct: 1   MKAAVVYVGG--GDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDII 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLG------------------------------ 90
            G E  G ++ VG  V  +KVGD+V                                   
Sbjct: 59  LGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGG 117

Query: 91  --GGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
              GG+AE V VPA   +  +P G+   +AAA  E   T +      + + PG + +V  
Sbjct: 118 GIDGGFAEYVRVPADFNLAKLPDGIDE-EAAALTEPLATAYHGHAERAAVRPGGTVVV-- 174

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTED 205
                     G+  IG  AI + K  G   V V   S E+L + K+  GADV +N   +D
Sbjct: 175 ---------VGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDD 225

Query: 206 FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 264
             A + E TGG+G DV+++ +G+     + L +L   G + ++G  GG    L    + +
Sbjct: 226 AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVS 285

Query: 265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLM 322
           K LT++ +   S   + +  +           +A GK+ P  +I   LPL +AAEA++L 
Sbjct: 286 KELTLRGSLRPSGREDFERAL---------DLLASGKIDPEKLITHRLPLDDAAEAYELF 336

Query: 323 ESSQ-HIGKIMLVP 335
              +    K++L P
Sbjct: 337 ADRKEEAIKVVLKP 350

Length = 350

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 5e-35
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 66/367 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+++         +++EV DP+   DEV+IKV    L   D LQ +G YP  K    Y
Sbjct: 1   MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMK----Y 54

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALL-----------GG--------------- 91
           P   G E  GT+  VG+NV  +K GD+V +LL            G               
Sbjct: 55  PVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEEL 114

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            G +AE   V    ++ VP  VS + A   P V   V+  +     +  GE+ LV     
Sbjct: 115 DGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAG-VKKGETVLVT---- 169

Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
                 G   G+G  AIQ+ K  G +V     SE K  +       V +  K  + V ++
Sbjct: 170 ------GAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKI 223

Query: 211 KEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTV 269
                  G D++++ +G    + +L SLN+ G++  IG    + T  L +  +  K + +
Sbjct: 224 G------GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEI 277

Query: 270 QAAGLRSRSTENKAL-IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 328
                 ++    +AL +V+E           GK+KPVI   + L E  +A + ++    I
Sbjct: 278 IGHISATKRDVEEALKLVAE-----------GKIKPVIGAEVSLSEIDKALEELKDKSRI 326

Query: 329 GKIMLVP 335
           GKI++ P
Sbjct: 327 GKILVKP 333

Length = 334

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  128 bits (325), Expect = 1e-34
 Identities = 99/370 (26%), Positives = 152/370 (41%), Gaps = 65/370 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA  + + G P  L+L++V  P+    +VL++V    +  +D     G      G  PY
Sbjct: 1   MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDG---VWGGILPY 55

Query: 61  -----PGLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG- 90
                 G E +G +  VG  V   K GD V             C              G 
Sbjct: 56  KLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI 115

Query: 91  --GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV-FMTSHLSPGESFLVDF 147
              GG+AE + VP+ +++ +P G+   +AA   +   T +  V     +L PG + +V  
Sbjct: 116 GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVV-- 173

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
             I       G  G+G  A+Q+ +      V     SEE L + + LGAD  +N  ++D 
Sbjct: 174 --I-------GVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN-ASDDV 223

Query: 207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
           V  V+E TGG+G D ++D +G+          L   GR  I+G  G  +   +       
Sbjct: 224 VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEI 283

Query: 266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS 325
            +     G R+   E  AL  S            GKVK  I K+ PL +A EA   +   
Sbjct: 284 SVIGSLWGTRAELVEVVALAES------------GKVKVEITKF-PLEDANEALDRLREG 330

Query: 326 QHIGKIMLVP 335
           +  G+ +LVP
Sbjct: 331 RVTGRAVLVP 340

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  125 bits (316), Expect = 3e-33
 Identities = 105/365 (28%), Positives = 160/365 (43%), Gaps = 62/365 (16%)

Query: 1   MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           MKAI  TQP     P+ L   E+  P     ++L++VEA ++N  DT  R G  P P   
Sbjct: 1   MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPG-- 58

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVS 113
            P   G + SG + +VG  V+ +KVGD+V     +   G  AE   V    V   P  +S
Sbjct: 59  QPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLS 118

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVDFCSISYSDVHGGSSGIGTFAIQ 168
             +AAA P  + T W  +F    +S      G++ L+    I      GG+ G+G+ AIQ
Sbjct: 119 FAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLI----I------GGAGGVGSIAIQ 168

Query: 169 MGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227
           + K   G+ V  TA   E +A  K+LGAD  IN+  +D   ++ E  G + VD I     
Sbjct: 169 LAKQLTGLTVIATASRPESIAWVKELGADHVINHH-QDLAEQL-EALGIEPVDYIFCLTD 226

Query: 228 ASYFQRNLGSLNIDGRLFIIGTQG------GAKTELNITSLFAKRLTVQAAGLRSRS--- 278
                  +  L        I  QG        +  L++  L +K  +     + +RS   
Sbjct: 227 TDQHWDAMAEL--------IAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQ 278

Query: 279 -----TENKAL--IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA---EAHQLMESSQHI 328
                 +++ L  +   ++         GK+K  + + L    A    EAH L+ES + I
Sbjct: 279 TPDMIEQHEILNEVADLLDA--------GKLKTTLTETLGPINAENLREAHALLESGKTI 330

Query: 329 GKIML 333
           GKI+L
Sbjct: 331 GKIVL 335

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  124 bits (313), Expect = 7e-33
 Identities = 105/379 (27%), Positives = 166/379 (43%), Gaps = 90/379 (23%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V  +PG    L++ ++ +P     EVL++V+   +  +D       Y    G +P+
Sbjct: 1   MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDL----HIY---HGRNPF 50

Query: 61  ------PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG 90
                  G E SG ++ VG+ V+  KVGD+V                          +LG
Sbjct: 51  ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLG 110

Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC-TVWSTVFMTSHLSPGESFLVD 146
               GG+AE + VPA   L VP G+SL  AA    V    + +     + ++ G++ LV 
Sbjct: 111 VHRDGGFAEYIVVPA-DALLVPEGLSLDQAAL---VEPLAIGAHAVRRAGVTAGDTVLVV 166

Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
                      G+  IG   IQ+ K +G RV V    +E+L   ++LGAD  IN   ED 
Sbjct: 167 -----------GAGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDV 215

Query: 207 VARVKEETGGKGVDVILDCMGASYFQRNLGSLN--ID-----GRLFIIGTQGGAKTELNI 259
            AR++E T G+G DV++D  G      N  S+   ++     GR+ ++G    +K  +  
Sbjct: 216 AARLRELTDGEGADVVIDATG------NPASMEEAVELVAHGGRVVLVGL---SKGPVTF 266

Query: 260 -TSLFAKR-LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEA 315
               F K+ LT+    L SR          E   +V   +  GKV P  +I    P  + 
Sbjct: 267 PDPEFHKKELTI----LGSR------NATREDFPDVIDLLESGKVDPEALITHRFPFEDV 316

Query: 316 AEAHQLMESSQ-HIGKIML 333
            EA  L E+    + K+++
Sbjct: 317 PEAFDLWEAPPGGVIKVLI 335

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score =  122 bits (308), Expect = 4e-32
 Identities = 93/358 (25%), Positives = 148/358 (41%), Gaps = 42/358 (11%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYP--PPKG 56
            KA+V T+ G P EVLQL+  E P     +EVL+K+ A  +N AD  Q +G YP  PP  
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 57  ASP--YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGG-YAEKVAVPAGQVLPVPSGVS 113
             P    G E  G ++ VG  V   K GD V  L  G G +     VPA  ++ VP+ V 
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVD 120

Query: 114 LKDAAAFPEVACTVWSTVFMTSH---LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG 170
            + AA      CT +    +      L PG+  + +          G +S +G   IQ+ 
Sbjct: 121 PEQAATLSVNPCTAY---RLLEDFVKLQPGDWVIQN----------GANSAVGQAVIQLA 167

Query: 171 KCQGVRVF--VTAGSEEKLAVC--KDLGADVCINY---KTEDFVARVKEETGGKGVDVIL 223
           K  G++    V    + +      K LGAD  +     ++      +K   GG+   + L
Sbjct: 168 KLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGR-PKLAL 226

Query: 224 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA----AGLRSRST 279
           +C+G          L+  G +   G   G    +  + L  K +T++       L+  + 
Sbjct: 227 NCVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANP 286

Query: 280 ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI---GKIMLV 334
           E K  ++ E+ +     I  GK+K    + +      E    + ++      GK +LV
Sbjct: 287 EEKEDMLEELAE----LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLV 340

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  121 bits (306), Expect = 5e-32
 Identities = 101/363 (27%), Positives = 147/363 (40%), Gaps = 64/363 (17%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY- 60
           KA V+   G P  L+ +EV  P+    EVLIK+EA  +   D    +G +   K   P  
Sbjct: 1   KAAVVHAAGGP--LEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSK--YPLV 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------C----------------ALLGG----G 92
           PG E  G ++ VG  V   KVGD+V        C                A+  G    G
Sbjct: 57  PGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQG 116

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           GYAE +   A   + +P G+ L  AA       TV+S +   +   PGE   V       
Sbjct: 117 GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVL------ 169

Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
                G  G+G  A+Q  +  G        S +K  + + LGAD  ++   E       E
Sbjct: 170 -----GIGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAEL-----DE 219

Query: 213 ETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           +    G DVIL     S    +  LG L   GR+ ++G         +I  L  KR ++ 
Sbjct: 220 QAAAGGADVILVT-VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIA 278

Query: 271 AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK 330
            +    R+   +AL  +          A GKVKP+I +  PL +A EA++ ME      +
Sbjct: 279 GSTHGGRADLQEALDFA----------AEGKVKPMI-ETFPLDQANEAYERMEKGDVRFR 327

Query: 331 IML 333
            +L
Sbjct: 328 FVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  120 bits (303), Expect = 2e-31
 Identities = 102/376 (27%), Positives = 161/376 (42%), Gaps = 78/376 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A V  + G P  L+++EV DP+   D V+++VEA  + R+D    +G    P    P+
Sbjct: 1   MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGH--DPDVTLPH 56

Query: 61  -PGLECSGTILSVGKNVSRWKVGD---------------------QVCA------LLGGG 92
            PG E +G ++ VG++VSRW+VGD                      VC           G
Sbjct: 57  VPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPG 116

Query: 93  GYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVDF 147
            +AE VAVP   V  + +P  V    AA    + C   T +  +   + + PGE   V  
Sbjct: 117 SFAEYVAVPRADVNLVRLPDDVDFVTAAG---LGCRFATAFRALVHQARVKPGEWVAV-- 171

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDF 206
                   HG   G+G  A+ +    G RV      ++KL + ++LGA   +N  + ED 
Sbjct: 172 --------HGCG-GVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDV 222

Query: 207 VARVKEETGGKGVDVILDCMGASYFQRN-LGSLNIDGRLFIIG--TQGGAKTELNITSLF 263
            A V++ TGG G  V +D +G     RN + SL   GR   +G      A   L +  + 
Sbjct: 223 AAAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVV 281

Query: 264 AKRLTVQAA-GLRSRSTENKALIVSEVEKNVWPA----IAVGKVKP--VIYKYLPLCEAA 316
           A+ L +  + G+ +                 + A    IA GK+ P  ++ + + L EA 
Sbjct: 282 ARELEIVGSHGMPAHR---------------YDAMLALIASGKLDPEPLVGRTISLDEAP 326

Query: 317 EAHQLMESSQHIGKIM 332
           +A   M+     G  +
Sbjct: 327 DALAAMDDYATAGITV 342

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  116 bits (293), Expect = 5e-30
 Identities = 91/298 (30%), Positives = 132/298 (44%), Gaps = 42/298 (14%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA      GS  +L L+EV  P+    EVL+KV+A  +  +D     G  P        
Sbjct: 1   MKAWRFH-KGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLT 59

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV----------CAL-LGG----------------GG 93
            G E +GT++ VG  V+ +KVGD+V          CAL   G                GG
Sbjct: 60  LGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGG 119

Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153
           +AE + VPA  ++PVP GV    AA   +   T +  V     + PGE+ LV        
Sbjct: 120 FAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLV-------- 171

Query: 154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213
               G  G+G  A+Q+ K  G  V      EEKL + K+LGAD  +N   +      K  
Sbjct: 172 ---IGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPK-DKKAA 227

Query: 214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
             G G DVI D +G    F+    ++   GR+ ++G  G  K  ++++ L A+ L + 
Sbjct: 228 GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGL-GRDKLTVDLSDLIARELRII 284

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  110 bits (276), Expect = 9e-30
 Identities = 51/112 (45%), Positives = 70/112 (62%), Gaps = 2/112 (1%)

Query: 161 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 219
           G+G  A+Q+ K  G  RV     SEEKL + K+LGAD  INY+ EDFV RV+E TGG+GV
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 220 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           DV++DC+GA +  ++ L  L   GR+ ++G  GGA     +  L  K LT+ 
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTIL 112

Length = 131

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  113 bits (286), Expect = 4e-29
 Identities = 83/257 (32%), Positives = 118/257 (45%), Gaps = 52/257 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP- 59
           MKA+V   PG    L+++EV  P+   DEVLIKV A  +   D    +G +    GA+P 
Sbjct: 1   MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEF----GAAPP 53

Query: 60  -YPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG------ 91
             PG E +G +++VG  V+ +KVGD+V                     C  L        
Sbjct: 54  LVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRN 113

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
           GG+AE V VPA QV  +P  +S ++AA    ++C V     +     PG+S LV      
Sbjct: 114 GGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIK--PGDSVLV------ 165

Query: 152 YSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
                 G   IG    Q+ K  G  RV V   +EEKL + K LGA   ++   ED  A+ 
Sbjct: 166 ---FGAGP--IGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ- 219

Query: 211 KEETGGKGVDVILDCMG 227
            +E    G DV+++  G
Sbjct: 220 -KEDNPYGFDVVIEATG 235

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score =  112 bits (282), Expect = 1e-28
 Identities = 83/273 (30%), Positives = 120/273 (43%), Gaps = 37/273 (13%)

Query: 17  LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----PPKGASPYPGLECSGTILSV 72
           + +V  P     EVL+K     +N +D     G Y     PP       G E  G +++V
Sbjct: 20  IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDC----GFEGVGEVVAV 75

Query: 73  GKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV------ACT 126
           G+ V+ +KVGD V A +  G +AE   VPA   +PVP           PEV        T
Sbjct: 76  GEGVTDFKVGDAV-ATMSFGAFAEYQVVPARHAVPVP--------ELKPEVLPLLVSGLT 126

Query: 127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 186
               +     +  GE+ LV             + G G FA+Q+ K  G  V  T  S+EK
Sbjct: 127 ASIALEEVGEMKSGETVLVT----------AAAGGTGQFAVQLAKLAGCHVIGTCSSDEK 176

Query: 187 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 246
               K LG D  INYKTED    +K+E   KGVDV+ + +G   F   + +L + GRL +
Sbjct: 177 AEFLKSLGCDRPINYKTEDLGEVLKKEY-PKGVDVVYESVGGEMFDTCVDNLALKGRLIV 235

Query: 247 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRST 279
           IG   G ++    + +    L  +   L ++S 
Sbjct: 236 IGFISGYQSGTGPSPVKGATLPPK---LLAKSA 265

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  111 bits (279), Expect = 2e-28
 Identities = 83/294 (28%), Positives = 120/294 (40%), Gaps = 30/294 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+  P +P  L+L EV DPQ    E L++V A +LNR +    K +   P GA P 
Sbjct: 1   MRALVVD-PDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGEL---KFAAERPDGAVP- 55

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            G + +G +     + S   VG +V  L   G +AE VAVP G +  +P GVS   AA  
Sbjct: 56  -GWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATL 114

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           P    T    +     L  G   LV           G S G+G FA+Q+    G  V   
Sbjct: 115 PVAGVTALRALRRGGPLL-GRRVLVT----------GASGGVGRFAVQLAALAGAHVVAV 163

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
            GS  +    ++LGA           V     E  G  VD+++D +G     R L  L  
Sbjct: 164 VGSPARAEGLRELGAAE---------VVVGGSELSGAPVDLVVDSVGGPQLARALELLAP 214

Query: 241 DGRLFIIGTQGGAKTELNITSLF----AKRLTVQAAGLRSRSTENKALIVSEVE 290
            G +  +G+  G     N  +       +RL             + A ++  V 
Sbjct: 215 GGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVA 268

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  112 bits (282), Expect = 2e-28
 Identities = 96/333 (28%), Positives = 142/333 (42%), Gaps = 71/333 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+  P  P  L ++E+  P+ K+ E+LI+V A  +  +D    KG  P P      
Sbjct: 1   MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPF--V 56

Query: 61  PGLECSGTILSVGKNV---SRWKVGDQV-------------CA----------------- 87
            G E SG ++ VG NV       VGD+V             CA                 
Sbjct: 57  LGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLK 116

Query: 88  --LLGG-----------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
             L  G                 GG AE   VPA  + P+P  +   ++A       T +
Sbjct: 117 GTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAY 176

Query: 129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL 187
             +   + + PGE+  V            G  G+G+ AIQ+ K  G    +     +EKL
Sbjct: 177 GALKHAADVRPGETVAVI-----------GVGGVGSSAIQLAKAFGASPIIAVDVRDEKL 225

Query: 188 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFI 246
           A  K+LGA   +N   ED VA ++E TGG+GVDV+++ +G    F+  L  +   GR  +
Sbjct: 226 AKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVV 285

Query: 247 IG-TQGGAKTELNITSLFAKRLTVQAA-GLRSR 277
           +G   GGA  E+ IT L  + + +  + G R R
Sbjct: 286 VGLAPGGATAEIPITRLVRRGIKIIGSYGARPR 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  108 bits (273), Expect = 3e-27
 Identities = 97/358 (27%), Positives = 145/358 (40%), Gaps = 69/358 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA+ +T+PG P  L  ++V  P     EVLIKVEA  +  +D   ++G+ P       Y
Sbjct: 1   YKAVQVTEPGGPLELVERDVPLPGP--GEVLIKVEACGVCHSDAFVKEGAMPGLS----Y 54

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-CALLGG------------------------- 91
           P   G E  G I +VG+ VSRWKVGD+V     GG                         
Sbjct: 55  PRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT 114

Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             GGYAE +  PA  +  +P  +   +AA       T ++     S   PG+   V    
Sbjct: 115 RDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNA-LRNSGAKPGDLVAVQ--- 170

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                   G  G+G  A+Q     G R    +   +K  + + LGA   I+   ED    
Sbjct: 171 --------GIGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEA 222

Query: 210 VKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 268
           ++ E G  G  +IL     A      +G L   G+L I+G  G     ++   L   R +
Sbjct: 223 LQ-ELG--GAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEP-VAVSPLQLIMGRKS 278

Query: 269 VQ--AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 324
           +    +G  +  +E   L  S          A+  V+P++  + PL +A EA+  M S
Sbjct: 279 IHGWPSG-TALDSE-DTLKFS----------ALHGVRPMVETF-PLEKANEAYDRMMS 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  106 bits (266), Expect = 3e-26
 Identities = 115/373 (30%), Positives = 164/373 (43%), Gaps = 70/373 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
           MKAIV T+ G     +L EV  P+    EVLIKV A ++   D          +    PP
Sbjct: 1   MKAIVKTKAGPG--AELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPP 58

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA------------------------LLG 90
                  G E +G ++ VG+ V+R KVGD V A                        +LG
Sbjct: 59  L----IFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILG 114

Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
               G +AE V VP   +      +  + A+    +   V  TV +   +S G+S L+  
Sbjct: 115 VDTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAV-HTV-LAGDVS-GKSVLITG 171

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
           C             IG  AI + K  G   V  +  +  +L + K +GADV IN + ED 
Sbjct: 172 CGP-----------IGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED- 219

Query: 207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA- 264
           V  VK  T G GVDV+L+  G     ++ L +L   GR+ I+G   G   ++++ +L   
Sbjct: 220 VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIF 278

Query: 265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLM 322
           K LTVQ  G+  R        VS + K+       GKV   PVI   LPL +  EA +LM
Sbjct: 279 KGLTVQ--GITGRKMFETWYQVSALLKS-------GKVDLSPVITHKLPLEDFEEAFELM 329

Query: 323 ESSQHIGKIMLVP 335
            S +  GK++L P
Sbjct: 330 RSGK-CGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  106 bits (266), Expect = 4e-26
 Identities = 78/249 (31%), Positives = 110/249 (44%), Gaps = 39/249 (15%)

Query: 2   KAIVITQPGSPEVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
           KA+      SP  L +  ++       KD+E+++KV A ALN  D L+   SY       
Sbjct: 2   KALTFKNNTSP--LTITTIKLPLPNCYKDNEIVVKVHAAALNPVD-LKLYNSYTFHFKVK 58

Query: 59  PYP-GLECSGTILSVGKNV-SRWKVGDQVCAL-----LGGGGYAEKVAV-PAGQ---VLP 107
               G + SG I+ VG NV S WKVGD+VC +      G G  ++ + V P      +  
Sbjct: 59  EKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITR 118

Query: 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSD----VHGGSSGIG 163
            P  +SL++AAA+P         V  T++       L D       D    V GGS+ +G
Sbjct: 119 KPENISLEEAAAWP--------LVLGTAY-----QILEDLGQKLGPDSKVLVLGGSTSVG 165

Query: 164 TFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE----ETGGKG 218
            FAIQ+ K    +   V   S     + K LGAD  I+Y     V  +K       G   
Sbjct: 166 RFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGK 225

Query: 219 VDVILDCMG 227
            D+ILDC+G
Sbjct: 226 FDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  105 bits (265), Expect = 5e-26
 Identities = 80/296 (27%), Positives = 117/296 (39%), Gaps = 72/296 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS---------- 50
           MKA           ++++EV +P +K  EV IKV    +         GS          
Sbjct: 1   MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGIC--------GSDLHEYLDGPI 49

Query: 51  YPPPKGASPYPGL--------ECSGTILSVGKNVSRWKVGDQVC---------------- 86
           + P +G     G         E SG ++ VG  V+ +KVGD+V                 
Sbjct: 50  FIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRG 109

Query: 87  --------ALLG----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
                     +G    GGG+AE V VPA  V  +P  V L + AA  E     W  V   
Sbjct: 110 LYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPL-EEAALVEPLAVAWHAV-RR 167

Query: 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL 193
           S   PG++ LV            G+  IG   I   K  G  ++ V+  SE +  + ++L
Sbjct: 168 SGFKPGDTALV-----------LGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216

Query: 194 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIG 248
           GA + ++    D VA V++ TGG GVDV  DC G  +     + +L   G    + 
Sbjct: 217 GATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVA 272

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  103 bits (260), Expect = 1e-25
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 36/283 (12%)

Query: 6   ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ-RKG----SYPPPKGASPY 60
           +T PG  EV   +E   P     +VL++VE   +  +D     +G     YP   G    
Sbjct: 1   LTGPGRFEV---EEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPG---G 54

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG E  G ++++G  V    VGD+V A L GG +AE     A   +P+PS   L D  AF
Sbjct: 55  PGHEGWGRVVALGPGVRGLAVGDRV-AGLSGGAFAEYDLADADHAVPLPS---LLDGQAF 110

Query: 121 P--EVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
           P   + C +   VF    +  G++  V            G+  IG   +Q+    G R  
Sbjct: 111 PGEPLGCALN--VFRRGWIRAGKTVAVI-----------GAGFIGLLFLQLAAAAGARR- 156

Query: 179 VTAGS--EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V A      +LA+ ++LGA   +   +E  V RV+E TGG G DV+++ +G  +   +L 
Sbjct: 157 VIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQW-PLDLA 215

Query: 237 S--LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 277
              +   GRL I G        +   +   K + +  A  R  
Sbjct: 216 GELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDP 258

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  104 bits (261), Expect = 2e-25
 Identities = 101/383 (26%), Positives = 152/383 (39%), Gaps = 87/383 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG   V   +EV  PQI+D  + ++KV A A+  +D    +G  P   G   
Sbjct: 1   MKAVVFKGPGDVRV---EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVL 57

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV---------------------CA--LLGG----- 91
             G E  G ++ VG  V   KVGD+V                     CA   L G     
Sbjct: 58  --GHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSP 115

Query: 92  ---GGYAEKVAVPA--GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
              G  AE V VP   G +L +P G+S        E A      + +   L  G      
Sbjct: 116 NLDGAQAEYVRVPFADGTLLKLPDGLS-------DEAA------LLLGDILPTGY----- 157

Query: 147 FCSISYSDVHG------GSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCI 199
           F +       G      G   +G  A+   +     RVF      E+L     LGA+  I
Sbjct: 158 FGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-I 216

Query: 200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID-----GRLFIIGTQGGAK 254
           N++  + V RV+E T G+G DV+L+ +G +     L  L  D     G +  +G     +
Sbjct: 217 NFEDAEPVERVREATEGRGADVVLEAVGGA---AAL-DLAFDLVRPGGVISSVGVHTAEE 272

Query: 255 TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPL 312
                   + K LT++      RS   + L          P +  G++    +I   +PL
Sbjct: 273 FPFPGLDAYNKNLTLRFGRCPVRSLFPELL----------PLLESGRLDLEFLIDHRMPL 322

Query: 313 CEAAEAHQLMESSQHIGKIMLVP 335
            EA EA++L +  + + K++L P
Sbjct: 323 EEAPEAYRLFD-KRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score =  103 bits (259), Expect = 2e-25
 Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 22/275 (8%)

Query: 1   MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGA 57
           M+A V TQ G P  VL++ EV  P     EVL++   + ++  D    +G+Y   P   A
Sbjct: 1   MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPA 60

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
               G E  G + +VG+ V   +VG +V      G +AE    PA  ++P+P G+S    
Sbjct: 61  IG--GSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISD--- 115

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV---HGGSSGIGTFAIQMGKCQG 174
               EVA  + +              L+DF  +        +     +G     +   +G
Sbjct: 116 ----EVAAQLIAMPLSA-------LMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARG 164

Query: 175 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234
           + V      +  +A  + LG    ++ +   +  +V+E  GG  + V LD +G       
Sbjct: 165 INVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGEL 224

Query: 235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 269
           L  L   G L   G+  G   +++   L  K+ TV
Sbjct: 225 LSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATV 259

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  101 bits (254), Expect = 2e-24
 Identities = 99/379 (26%), Positives = 150/379 (39%), Gaps = 73/379 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--------- 51
           MKA  + +PG P  L+  E++ P+    EVL+KV A  +  +D     G Y         
Sbjct: 1   MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMS 58

Query: 52  -PPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV---------------------CA- 87
                   P   G E  G +++VG + +  KVGD+V                     CA 
Sbjct: 59  LDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAK 118

Query: 88  ---LLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES 142
              L     GGYAE V VP  + L  P G+    AA       T +S V     L   E 
Sbjct: 119 GRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEP 178

Query: 143 FLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINY 201
            ++    I       G+ G+G  A+ + K  G   + V    E KL   K  GADV +N 
Sbjct: 179 VVI----I-------GAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG 227

Query: 202 KTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNI- 259
              D   R+ +  GG GVD ++D +  S         L   G+L ++G  GG   E  + 
Sbjct: 228 SDPDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG---EATLP 283

Query: 260 TSLFA-KRLTVQAAGLRSRSTENKALI--VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA 316
             L   + LT+Q +       E + L+                GK+KP+     PL +  
Sbjct: 284 LPLLPLRALTIQGS-YVGSLEELRELVALAKA-----------GKLKPIPLTERPLSDVN 331

Query: 317 EAHQLMESSQHIGKIMLVP 335
           +A   +++ + +G+ +L P
Sbjct: 332 DALDDLKAGKVVGRAVLKP 350

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 95.5 bits (238), Expect = 3e-24
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)

Query: 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 252
           LGAD  I+Y TEDF     E T G+GVDV+LD +G     R L +L   GRL  IG    
Sbjct: 1   LGADEVIDYTTEDFE----EATAGEGVDVVLDTVGGETLLRALLALKPGGRLVSIGGPDL 56

Query: 253 AKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 312
             +     +  A    V+   L   S       ++E+       +  GK++PVI +  PL
Sbjct: 57  LLSV----AAKAGGRGVRGVFLFPVSPGEAGADLAEL----AELVEAGKLRPVIDRVFPL 108

Query: 313 CEAAEAHQLMESSQHIGKIML 333
            EAAEAH+ +ES +  GK++L
Sbjct: 109 EEAAEAHRYLESGRARGKVVL 129

Length = 129

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 99.1 bits (247), Expect = 3e-23
 Identities = 91/402 (22%), Positives = 155/402 (38%), Gaps = 99/402 (24%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRA-------------DTLQ 46
             AI   + G P + +QL+ V  P++   EVL+ V A  +N                 L+
Sbjct: 10  AFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLR 69

Query: 47  RKGSYPPPKGASPY--PGLECSGTILSVGKNVSRWKVGDQVCA----------------- 87
           + G     K   P+   G + SG +  VG  V+RWKVGD+V A                 
Sbjct: 70  KYG-----KLDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDP 124

Query: 88  LLGG-----------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MT 134
           +L             G +AE   V   Q++P P  ++ ++AA       T +  +     
Sbjct: 125 MLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNP 184

Query: 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG 194
           + + PG++ L+           G + G+G++A Q+ +  G        S EK   C+ LG
Sbjct: 185 AAVKPGDNVLI----------WGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRSLG 234

Query: 195 ADVCINYKTED----------------------FVARVKEETGGKGVDVILDCMGASYFQ 232
           A+  I+                           F  R++E TGG+  D++ +  G + F 
Sbjct: 235 AEAVIDRNDFGHWGRLPDHNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFP 294

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ---AAGLRSRSTENKALIVSEV 289
            ++      G + I G   G   + +   L+ ++  +Q    A LR     N+       
Sbjct: 295 TSVYVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAYEANR------- 347

Query: 290 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331
                  +A G++ P + K  PL E  +AHQ +  + H G +
Sbjct: 348 ------LVAKGRIDPTLSKTYPLEEIGQAHQDVHRNHHQGNV 383

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 96.1 bits (240), Expect = 9e-23
 Identities = 74/280 (26%), Positives = 119/280 (42%), Gaps = 25/280 (8%)

Query: 1   MKAIVITQPGSPEV---LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           MKA+++ + G P     L L E E P+    EVLIKVEA  +N +D    KG Y   K  
Sbjct: 1   MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKAL 60

Query: 58  SPYPGLECSGTILSVGKNVSRW-KVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
              PG E SGT+++ G        +G +V       G YAE     A Q LP+P GVS +
Sbjct: 61  PVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFE 120

Query: 116 DAAAF---PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH-GGSSGIGTFAIQMGK 171
             A+    P  A  +  T          ++            VH   +S +G   +++ K
Sbjct: 121 QGASSFVNPLTALGMLETAREEGA----KAV-----------VHTAAASALGRMLVRLCK 165

Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231
             G++V      +E++ + K +GA+  +N    DF+  +KE        +  D +G    
Sbjct: 166 ADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLT 225

Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTEL-NITSLFAKRLTVQ 270
            + L ++     L++ G   G   E  +   L  K  +++
Sbjct: 226 GQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 95.2 bits (238), Expect = 3e-22
 Identities = 91/364 (25%), Positives = 136/364 (37%), Gaps = 87/364 (23%)

Query: 9   PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR------KGSYPPPKGASPYPG 62
           P  P+  +L EV  P++KD EVL++    ++   D   R      K   PP +   P  G
Sbjct: 14  PPPPDDFELVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRG 70

Query: 63  LECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVSLK 115
                    VG+        +KVGD V    G  G+ E   V      + L    G+ L 
Sbjct: 71  G-------GVGEVVESRSPDFKVGDLV---SGFLGWQEYAVVDGASGLRKLDPSLGLPLS 120

Query: 116 DA------------AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIG 163
                             E+               PGE+ +V             +  +G
Sbjct: 121 AYLGVLGMTGLTAYFGLTEIG-----------KPKPGETVVVS----------AAAGAVG 159

Query: 164 TFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDV- 221
           +   Q+ K  G RV   AGS+EK   + ++LG D  INYKT D    +KE     G+DV 
Sbjct: 160 SVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAA-PDGIDVY 218

Query: 222 -------ILDCMGASYFQRNLGSLNIDGRLFIIGT--QGGAKTEL---NITSLFAKRLTV 269
                  ILD          L  LN  GR+ + G   Q  A       N+ ++  KRLT+
Sbjct: 219 FDNVGGEILDAA--------LTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTM 270

Query: 270 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 329
           Q  G       ++     E    +   +A GK+K        L  A EA   + + ++ G
Sbjct: 271 Q--GFIVSDYADRF---PEALAELAKWLAEGKLKYREDVVEGLENAPEAFLGLFTGKNTG 325

Query: 330 KIML 333
           K+++
Sbjct: 326 KLVV 329

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 94.9 bits (237), Expect = 3e-22
 Identities = 96/375 (25%), Positives = 155/375 (41%), Gaps = 75/375 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK------GSYPPP 54
           MKA+V  +      L L +V  P+   ++VLIKV+ TA+   D            + P P
Sbjct: 1   MKALVKLKAE--PGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVP 58

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA---LLGG-------------------- 91
                  G E  G ++ VG  V+ +KVGD+V     ++ G                    
Sbjct: 59  M----VVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG 114

Query: 92  ----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
               G +AE + +PA  V  +P  +    AA F      V  T   +  L  GE  L+  
Sbjct: 115 VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAV-HTAL-SFDLV-GEDVLIT- 170

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
                     G+  IG  A  + K  G R V +T  +E +L + + +GA   +N   ED 
Sbjct: 171 ----------GAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDL 220

Query: 207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
              + E    +G DV L+  GA S F++ L ++N  GR+ ++G   G    ++   +  K
Sbjct: 221 RDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFK 279

Query: 266 RLTVQAAGLRSR---STENK--ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ 320
            LT++  G+  R    T  K  AL+ S ++           + P+I    P+ +  +  +
Sbjct: 280 GLTIK--GIYGREMFETWYKMSALLQSGLD-----------LSPIITHRFPIDDFQKGFE 326

Query: 321 LMESSQHIGKIMLVP 335
            M S Q  GK++L  
Sbjct: 327 AMRSGQS-GKVILDW 340

Length = 341

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 93.3 bits (232), Expect = 1e-21
 Identities = 85/345 (24%), Positives = 151/345 (43%), Gaps = 25/345 (7%)

Query: 2   KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
           KA+   +P     P+ L   ++  P+    ++L++V+A ++N  DT  R    P   G  
Sbjct: 1   KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQP 59

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
              G + +G +++VG  V+ +K GD+V     +   G  AE   V    V   P  +S  
Sbjct: 60  KILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFA 119

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQG 174
           +AAA P  + T W  +F    ++   +       I      GG+ G+G+  IQ+ +   G
Sbjct: 120 EAAALPLTSITAWELLFDRLGINDPVAGDKRALLII-----GGAGGVGSILIQLARQLTG 174

Query: 175 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD-VILDCMGASYFQR 233
           + V  TA   E      +LGA   I++ ++   A++ E+ G + V  V        +F+ 
Sbjct: 175 LTVIATASRPESQEWVLELGAHHVIDH-SKPLKAQL-EKLGLEAVSYVFSLTHTDQHFKE 232

Query: 234 NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE--K 291
            +  L   GR  +I        EL+I+    K +++    + +RS    A ++ +     
Sbjct: 233 IVELLAPQGRFALIDDPA----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLN 288

Query: 292 NVWPAIAVGKVKPVIYKYLPLCEAA---EAHQLMESSQHIGKIML 333
            V   +  GK++  + +      AA    AH L+ES +  GKI+L
Sbjct: 289 RVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVL 333

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 93.6 bits (233), Expect = 2e-21
 Identities = 97/403 (24%), Positives = 157/403 (38%), Gaps = 107/403 (26%)

Query: 1   MKAIVI--TQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALN-------------RADT 44
           M A  I   + G P   +QL++V  P++   EVL+ V A  +N                 
Sbjct: 13  MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAA 72

Query: 45  LQRKGSYPPPKGASPY--PGLECSGTILSVGKNVSRWKVGDQVCAL-----------LGG 91
            QR+G         PY   G + SG + +VG+ V  WKVGD+V               GG
Sbjct: 73  RQRRGR------DEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGG 126

Query: 92  -----------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
                            G +A+   V A Q++P P  +S ++AAA+  V  T +  +F  
Sbjct: 127 DPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLF-- 184

Query: 135 SH----LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 190
                 + PG++ L+           G S G+G+ AIQ+ +  G        SEEK   C
Sbjct: 185 GWNPNTVKPGDNVLI----------WGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC 234

Query: 191 KDLGADVCINYKTED----------------------FVARVKEETGGK-GVDVILDCMG 227
           + LGA+  IN +  D                      F   + +  GG+   D++ +  G
Sbjct: 235 RALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPG 294

Query: 228 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA---AGLRSRSTENKAL 284
            + F  ++   +  G + I     G     +   L+ ++  +Q    A  R  +  N+ L
Sbjct: 295 RATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANR-L 353

Query: 285 IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQH 327
           ++             G++ P + K   L E  +AHQLM  +QH
Sbjct: 354 VMK------------GRIDPCLSKVFSLDETPDAHQLMHRNQH 384

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 68/278 (24%), Positives = 104/278 (37%), Gaps = 69/278 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A V+ + G P  ++  E++DP     EVL+++ A  L  +D     G  P P  A   
Sbjct: 1   MRAAVLHEVGKPLEIEEVELDDP--GPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPA--V 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC---------------------------------- 86
            G E +G +  VG  V+  K GD V                                   
Sbjct: 57  LGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPD 116

Query: 87  -------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV---WST 130
                        A+ G G +AE   VP   V+ +   + L  AA    + C V      
Sbjct: 117 GTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGCGVTTGVGA 173

Query: 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAV 189
           V  T+ + PG++  V    I       G  G+G  AIQ  +  G    +      EKL +
Sbjct: 174 VVNTARVRPGDTVAV----I-------GCGGVGLNAIQGARIAGASRIIAVDPVPEKLEL 222

Query: 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227
            +  GA   +N   +D V  V++ T G+G D   + +G
Sbjct: 223 ARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVG 260

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 91.2 bits (227), Expect = 6e-21
 Identities = 88/372 (23%), Positives = 150/372 (40%), Gaps = 70/372 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+  V   PG   V +L+E   P     EVL++V+A+ L  +D       +  P      
Sbjct: 1   MRGAVF--PGDRTV-ELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVI 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-------CA---------------------LLGGG 92
           PG E +G +++VG  V+ ++VGD+V       C                          G
Sbjct: 58  PGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDG 117

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           G+AE + VP   ++P+P  +S  D A       T +  +     +S  ++ LV       
Sbjct: 118 GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLV------- 169

Query: 153 SDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211
                G+  +G  A+ + +  G   V     S E+L + K LGAD  IN   +D V  ++
Sbjct: 170 ----VGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVIN-SGQDDVQEIR 224

Query: 212 EETGGKGVDVILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITS-LFAKRLTV 269
           E T G G DV ++C G +  +R  L ++   GRL ++G   G +  + +++ L  K+ T+
Sbjct: 225 ELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGE--GGELTIEVSNDLIRKQRTL 282

Query: 270 QAAGLRSRST------ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME 323
               + S         E    +       +           ++     L +A EA+ L  
Sbjct: 283 ----IGSWYFSVPDMEECAEFL---ARHKLEVD-------RLVTHRFGLDQAPEAYALFA 328

Query: 324 SSQHIGKIMLVP 335
                GK++ V 
Sbjct: 329 -QGESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 90.8 bits (226), Expect = 1e-20
 Identities = 69/270 (25%), Positives = 106/270 (39%), Gaps = 37/270 (13%)

Query: 17  LQEVEDPQIKDDEVLIKVEATALNRADTLQRKG---SYPPPKGASPYPGLECSGTILSVG 73
           L+EV+ P+  + +VL++    +L+      R     SY PP       G    G  ++  
Sbjct: 29  LEEVDVPEPGEGQVLLRTLYLSLD-PYMRGRMSDAPSYAPPVE----LGEVMVGGTVAKV 83

Query: 74  --KNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPV-PSGVSLKDA---AAFPEVACTV 127
              N   ++ GD V   +G  G+ E        +  + PS   L         P +  T 
Sbjct: 84  VASNHPGFQPGDIV---VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGL--TA 138

Query: 128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL 187
           +  +        GE+ +V             +  +G+   Q+ K +G RV   AG  EK 
Sbjct: 139 YFGLLDIGQPKAGETVVVS----------AAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC 188

Query: 188 AVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 246
               + LG D  I+YK EDF   +KE    KG+DV  + +G       L  LN+  R+ +
Sbjct: 189 DFLTEELGFDAGIDYKAEDFAQALKEAC-PKGIDVYFENVGGEVLDAVLPLLNLFARIPV 247

Query: 247 IGTQGG-AKTEL-----NITSLFAKRLTVQ 270
            G        EL      +  L AKRL VQ
Sbjct: 248 CGAISQYNAPELPPGPRRLPLLMAKRLRVQ 277

Length = 340

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 87.6 bits (218), Expect = 1e-19
 Identities = 67/233 (28%), Positives = 96/233 (41%), Gaps = 57/233 (24%)

Query: 1   MKAIVITQPGSPEV--LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
           MKA+V+ +PG  E   L+L EV  P+    EVLIKVEA  + R D    +G  PPPK   
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPL 60

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV-----------CAL-LGG--------------- 91
             PG E  G + +VG  V+R+ VGD+V           C     G               
Sbjct: 61  -IPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTV 119

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            GGYAE +        P+P     ++AA                  L  G   ++ + ++
Sbjct: 120 DGGYAEYMVADERFAYPIPEDYDDEEAAPL----------------LCAG---IIGYRAL 160

Query: 151 SYSDVHGGSS----GIGT---FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD 196
             + +  G      G G     A+Q+ + QG  VF    S E   + ++LGAD
Sbjct: 161 KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGAD 213

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 86.5 bits (215), Expect = 5e-19
 Identities = 77/327 (23%), Positives = 114/327 (34%), Gaps = 86/327 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            +A V  + G P  L+++EV+    +  EVL+++ AT +   D     G  P       +
Sbjct: 3   TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-----F 55

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E +G + +VG+ V+  K GD V             C                  
Sbjct: 56  PAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG 115

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---- 125
                              LG   +AE   V    ++ +       D  A  E AC    
Sbjct: 116 TMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKI-------DPDAPLEKACLLGC 168

Query: 126 ---TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTA 181
              T    V  T+ + PG++  V F          G  G+G  AIQ  K  G  R+    
Sbjct: 169 GVTTGIGAVVNTAKVEPGDTVAV-F----------GLGGVGLAAIQGAKAAGAGRIIAVD 217

Query: 182 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI 240
            + EKL + K  GA   +N K  D V     E    G D   +C+G     ++ L + + 
Sbjct: 218 INPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR 277

Query: 241 DGRLFIIGTQG-GAKTELNITSLFAKR 266
            G   IIG  G G +       L   R
Sbjct: 278 GGTSVIIGVAGAGQEISTRPFQLVTGR 304

Length = 366

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 90/372 (24%), Positives = 151/372 (40%), Gaps = 62/372 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG    + L+EV DP+I+   + +++V AT++  +D    +G  P  K    
Sbjct: 1   MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMI 57

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV----------------------------CALLGG 91
             G E  G ++ VG +V R K GD+V                              L   
Sbjct: 58  L-GHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR 116

Query: 92  --GGYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
             GG AE V VP   +    +P G+  +DA    ++  T +    + + + PG +  V  
Sbjct: 117 IDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAEL-AGIKPGSTVAV-- 173

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 207
                  +  G  G+   A         R+     + E+L + K+ GA   IN K  D V
Sbjct: 174 -------IGAGPVGLCAVAGARLLGAA-RIIAVDSNPERLDLAKEAGATDIINPKNGDIV 225

Query: 208 ARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 266
            ++ E TGG+GVD +++ +G    F++ +  +   G +  +G  G       +   F K 
Sbjct: 226 EQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKN 285

Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMES 324
           LT    GL         L+           I  GK+ P  +I    PL +  +A++L ++
Sbjct: 286 LTF-KTGLVPVRARMPELL---------DLIEEGKIDPSKLITHRFPLDDILKAYRLFDN 335

Query: 325 -SQHIGKIMLVP 335
                 K+++ P
Sbjct: 336 KPDGCIKVVIRP 347

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 82.6 bits (205), Expect = 6e-18
 Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 43/279 (15%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA+V+ +      L L+ +    + + +VLI+V  ++LN  D L   G+    +    Y
Sbjct: 1   FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR---NY 57

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSG 111
           P   G++ +GT++S      R++ GD+V            GG+AE V VPA  V+P+P G
Sbjct: 58  PHTPGIDAAGTVVSSD--DPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEG 115

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSH--LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQM 169
           +SL++A        T   +V        +P +  ++         V G + G+G+ A+ +
Sbjct: 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVL---------VTGATGGVGSIAVAI 166

Query: 170 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK--------GVDV 221
               G  V    G EE+    K LGA   ++   ED       +   K        G   
Sbjct: 167 LAKLGYTVVALTGKEEQADYLKSLGASEVLD--REDL-----LDESKKPLLKARWAGA-- 217

Query: 222 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 260
            +D +G       L      G +   G   G +    + 
Sbjct: 218 -IDTVGGDVLANLLKQTKYGGVVASCGNAAGPELTTTVL 255

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 99/401 (24%), Positives = 148/401 (36%), Gaps = 110/401 (27%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPP-PKGAS 58
           MKA+V    G   V   +EV DP+I+D  + +++V ATA+  +D     G  P   KG  
Sbjct: 1   MKALVWHGKGDVRV---EEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGD- 56

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV--------------------------------- 85
              G E  G +  VG  V   KVGD+V                                 
Sbjct: 57  -ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAK 115

Query: 86  ------CALLGG----GGY----AEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWS 129
                   + G     GGY    AE V VP   V    +P  +S + A    ++  T + 
Sbjct: 116 LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGY- 174

Query: 130 TVFMTSHLSPGESFLVDFCSISYSDVHG--GSSGIGTFAIQMGKCQGV-RVFVTAGSEEK 186
                           +   +   D     G   +G FA +  K  G  RV       E+
Sbjct: 175 -------------HAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPER 221

Query: 187 LAVCKD-LGADVCINYKTEDFVA-RVKEETGGKGVDVILDCMGASY-------FQRNLGS 237
           L + +  LGA+  IN++  D V   ++E TGG+G DV +D +G           ++ L  
Sbjct: 222 LEMARSHLGAET-INFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLK 280

Query: 238 LNID---------------GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 282
           L  D               G + IIG  GG   +  I +   K LT     LR   T  +
Sbjct: 281 LETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLT-----LRMGQTHVQ 335

Query: 283 ALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQL 321
             +       +   I  G++ P  +I   LPL +A EA+++
Sbjct: 336 RYL-----PRLLELIESGELDPSFIITHRLPLEDAPEAYKI 371

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 81.0 bits (201), Expect = 3e-17
 Identities = 79/308 (25%), Positives = 130/308 (42%), Gaps = 62/308 (20%)

Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD----TLQRKGSYPPPKGAS 58
           A V+  PG    L+L+E   P+    EVL++V A  +  +D       R G +   +   
Sbjct: 1   AAVLHGPGD---LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKE--- 54

Query: 59  PYP---GLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGY----------- 94
             P   G E +GT+++VG  V+  KVGD+V          C     G Y           
Sbjct: 55  --PMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAAT 112

Query: 95  -------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
                     V  PA     +P  VSL++ A    ++  V +     + + PG++ LV F
Sbjct: 113 PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHAC--RRAGVRPGDTVLV-F 169

Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED- 205
                     G+  IG     + K  G  +V VT     +L   K+LGA   +N +TED 
Sbjct: 170 ----------GAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDT 219

Query: 206 --FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 262
                ++ E  GGKG DV+++C GA S  Q  + +    G + ++G  G  +  L +++ 
Sbjct: 220 PESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGM-GKPEVTLPLSAA 278

Query: 263 FAKRLTVQ 270
             + + ++
Sbjct: 279 SLREIDIR 286

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 78.5 bits (194), Expect = 1e-16
 Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG    G ++ VG  V+ +K GD+V      G +AE+V VPA  ++P+P G+  + AA  
Sbjct: 24  PGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT 80

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFV 179
             +A T  + V   +    GE   V         V  G   +G  A Q+ K  G R V  
Sbjct: 81  A-LAATALNGV-RDAEPRLGERVAV---------VGLGL--VGLLAAQLAKAAGAREVVG 127

Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSL 238
                 +  + + LG    +        A   +E GG+G DV+++  G  S  +  L  L
Sbjct: 128 VDPDAARRELAEALGPADPV-------AADTADEIGGRGADVVIEASGSPSALETALRLL 180

Query: 239 NIDGRLFIIGTQGGAKTELNITSLF-AKRLTVQA--AGLRSRS------TENKALIVSEV 289
              GR+ ++G  G     L +   F  KRL +++       R       TE + L     
Sbjct: 181 RDRGRVVLVGWYGL--KPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEE--- 235

Query: 290 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG-KIML 333
                  +A G+++ +I   +P  +A EA++L+        K++L
Sbjct: 236 ---ALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 78.7 bits (194), Expect = 2e-16
 Identities = 100/371 (26%), Positives = 151/371 (40%), Gaps = 69/371 (18%)

Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT------LQRKGSYPPPKG 56
           A++ T+PG     +L EV  P+    EVLIKV AT++   D          +    PP+ 
Sbjct: 1   ALMKTKPG--YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQ- 57

Query: 57  ASPYPGLECSGTILSVGKNVSRWKVGDQVCA-----------LLGG-------------- 91
                G E +G ++ +G  V   KVGD V                G              
Sbjct: 58  ---VVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 114

Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             G +AE   VPA  +   P  +  + A     +   V  TV +   +S G+S LV    
Sbjct: 115 TDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAV-HTV-LAGPIS-GKSVLVT--- 168

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208
                   G+  IG  AI + K  G   V V+  +E +L + K +GA   +N   ED V 
Sbjct: 169 --------GAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVK 220

Query: 209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKR 266
            V + T G+GVDV L+  GA    ++ L ++   GR+ ++G   G  T +     +F K 
Sbjct: 221 EVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIF-KG 279

Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMES 324
           LT+   G+  R        VS +       I  GK+   P+I       +  +  +LM S
Sbjct: 280 LTIY--GITGRHMFETWYTVSRL-------IQSGKLDLDPIITHKFKFDKFEKGFELMRS 330

Query: 325 SQHIGKIMLVP 335
            Q  GK++L  
Sbjct: 331 GQ-TGKVILSL 340

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 71/275 (25%), Positives = 120/275 (43%), Gaps = 40/275 (14%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
           KA+V+ +       Q++ ++   + + +VLIKV  ++LN  D L   G      SYP   
Sbjct: 1   KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPM-- 58

Query: 56  GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVP 109
                PG++ +GT++S      R++ GD+V     G      GGY++   VPA  ++P+P
Sbjct: 59  ----IPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLP 112

Query: 110 SGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAI 167
            G+SL++A A      T   +V     + L+P +  ++         V G + G+G+ A+
Sbjct: 113 EGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVL---------VTGATGGVGSLAV 163

Query: 168 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR--VKEETGGKGVDVILDC 225
            +    G  V  + G  E+    K+LGA   I+ +      +   KE   G      +D 
Sbjct: 164 AILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAG-----AVDT 218

Query: 226 MGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 260
           +G       L  L   G +   G  GG   +L  T
Sbjct: 219 VGGHTLANVLAQLKYGGAVAACGLAGGP--DLPTT 251

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 75.6 bits (186), Expect = 3e-15
 Identities = 65/277 (23%), Positives = 95/277 (34%), Gaps = 67/277 (24%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V+ + G P  L ++E+E    K  EV IKV AT +   D     G  P P       
Sbjct: 2   KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVI--L 57

Query: 62  GLECSGTILSVGKNVSRWKVGDQV-------------CA--------------------- 87
           G E +G + S+G  V+  K GD+V             C                      
Sbjct: 58  GHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSD 117

Query: 88  --------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133
                          LG   +AE   V    +  +     L+          T +     
Sbjct: 118 GTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVN 177

Query: 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD 192
           T+ ++PG +  V            G  G+G   I   K  G  R+     +++K    K 
Sbjct: 178 TAKVTPGSTCAV-----------FGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ 226

Query: 193 LGADVCINYKT--EDFVARVKEETGGKGVDVILDCMG 227
           LGA  CIN +   +  V  + E T G GVD   + +G
Sbjct: 227 LGATECINPRDQDKPIVEVLTEMTDG-GVDYAFEVIG 262

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 74.4 bits (183), Expect = 7e-15
 Identities = 96/385 (24%), Positives = 153/385 (39%), Gaps = 87/385 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG--------SYP 52
           M+A+V   P      +L+EV  P+    E+L+KVEA  +   D     G        + P
Sbjct: 1   MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQP 57

Query: 53  PPKGASPYPGLECSGTILSVGKNVSRW--KVGDQVCA----------------------- 87
           P       PG E  G ++ +G+       KVGD+V +                       
Sbjct: 58  PYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKH 117

Query: 88  -LLG-----GGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG 140
            L G      GG AE +  P    V  VP  +  +DA     +AC + +           
Sbjct: 118 DLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHA----------- 166

Query: 141 ESFLVDFCSISYSD--VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV 197
               VD  +I + D  V  G+  +G   I   + +   ++ V    +E+LA+ +  GADV
Sbjct: 167 ----VDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADV 222

Query: 198 CINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTE 256
            +N    D V ++KE TGG G D+ ++  G  S  ++ L  +   GR F+         E
Sbjct: 223 VLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGR-FV---------E 272

Query: 257 LNITSLFAKRLTVQAAGLRSRSTENKALIV--SEVEKNVWPA----IAVGKV--KPVIYK 308
               S+F   +TV  + +  R    K L V  S +    +P     IA G++    ++  
Sbjct: 273 F---SVFGDPVTVDWSIIGDR----KELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTH 325

Query: 309 YLPLCEAAEAHQLMESSQHIGKIML 333
             PL +  EA +LM       K++L
Sbjct: 326 QFPLEDFEEAFELMARGDDSIKVVL 350

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 73.8 bits (182), Expect = 7e-15
 Identities = 78/317 (24%), Positives = 121/317 (38%), Gaps = 79/317 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG       ++   P I++  + ++K+  T +   D    KG  P       
Sbjct: 1   MKALVYHGPGKISW---EDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVT---- 53

Query: 60  YPGL----ECSGTILSVGKNVSRWKVGDQV----------CAL---------LGGG---G 93
            PG     E  G +  VG  V+ +KVGD+V          C             GG   G
Sbjct: 54  -PGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILG 112

Query: 94  Y------AEKVAVP-AGQVL-PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
                  AE V +P A   L  +P GV  + A     V     S +  T +    E    
Sbjct: 113 NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAA-----VML---SDILPTGY----E---- 156

Query: 146 DFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG------------SEEKLAVCKDL 193
             C +    V  G     T AI      G+   +TA              + +L V K L
Sbjct: 157 --CGVLNGKVKPGD----TVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKL 210

Query: 194 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG 252
           GA   +N    D + +V E T G+GVDV+++ +G  + F+     +   G +  +G   G
Sbjct: 211 GATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH-G 269

Query: 253 AKTELNITSLFAKRLTV 269
              +L++  L+ K +T+
Sbjct: 270 KPVDLHLEKLWIKNITI 286

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 74.2 bits (183), Expect = 7e-15
 Identities = 91/376 (24%), Positives = 146/376 (38%), Gaps = 79/376 (21%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A V+T PG P  L+++EV  P ++   VL++V    +  +D     G  P      P P
Sbjct: 2   RAAVLTGPGKP--LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRP----RVPLP 55

Query: 62  ---GLECSGTI---------------LSVGKNV-----------------------SRWK 80
              G E  G +               L VG  V                       +R K
Sbjct: 56  IILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK 115

Query: 81  VGDQVCALLGG--GGYAEKVAVPAGQ-VLPVPSGVSLKDAAAFPEVAC---TVWSTVFMT 134
            G +         GGYAE + +P G  ++ VP  V  + AA      C   TV + +   
Sbjct: 116 YGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAP---ANCALATVLAALDRA 172

Query: 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDL 193
             +  G++ +V            G+  +G +A+   K  G  RV V  GS E+L + ++ 
Sbjct: 173 GPVGAGDTVVVQ-----------GAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREF 221

Query: 194 GADVCIN---YKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGT 249
           GAD  I+          A V++ TGG+G DV+++  G  +     L  L   G   ++G+
Sbjct: 222 GADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGS 281

Query: 250 QGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 308
              A T  L+   +  K LT+        S   +A  V  +E+         +   ++  
Sbjct: 282 VAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRA--VRFLERT-QDRFPFAE---LVTH 335

Query: 309 YLPLCEAAEAHQLMES 324
             PL +  EA +L ES
Sbjct: 336 RYPLEDINEALELAES 351

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 71.2 bits (175), Expect = 5e-14
 Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 30/273 (10%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A+V+ +      + ++ +    + + +VLI+V  +++N  D L    S P  K    YP
Sbjct: 2   QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGL---ASIPGGKIVKRYP 58

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGV 112
              G++ +GT+  V  N  R+K GD+V      LG    GGY+E   VPA  V+P+P G+
Sbjct: 59  FIPGIDLAGTV--VESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGL 116

Query: 113 SLKDAAAFPEVACTVWSTV--FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG 170
           +LK+A        T   ++     + L+P +  ++         V G + G+G+ A+ + 
Sbjct: 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVL---------VTGATGGVGSLAVSIL 167

Query: 171 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230
              G  V  + G  +     K LGA   I    E+      +    +     +D +G   
Sbjct: 168 AKLGYEVVASTGKADAADYLKKLGAKEVIP--REELQEESIKPLEKQRWAGAVDPVGGKT 225

Query: 231 FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF 263
               L +L   G + + G  GG + E   T++F
Sbjct: 226 LAYLLSTLQYGGSVAVSGLTGGGEVE---TTVF 255

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 71.4 bits (176), Expect = 5e-14
 Identities = 76/342 (22%), Positives = 118/342 (34%), Gaps = 84/342 (24%)

Query: 14  VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTIL 70
            L+    E   +  D+V IK+    +  +D    +  +    G + YP   G E  G ++
Sbjct: 11  KLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEW----GPTKYPLVPGHEIVGIVV 66

Query: 71  SVGKNVSRWKVGD----------------------QVCA---------LLGG----GGYA 95
           +VG  V+++KVGD                      Q C             G    GGYA
Sbjct: 67  AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYA 126

Query: 96  EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155
           + + V    V  +P G+    AA  P + C    TV+     SP    L          V
Sbjct: 127 DHIVVDERFVFKIPEGLDSAAAA--P-LLCA-GITVY-----SP----LKRN------GV 167

Query: 156 HGGSS-------GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208
             G         G+G  A++  K  G  V   + S  K      LGAD  I  K  + + 
Sbjct: 168 GPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMK 227

Query: 209 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
           +         +D+I+D + AS+     L  L   G L ++G        +    L   R 
Sbjct: 228 KAA-----GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLP-VPPFPLIFGRK 281

Query: 268 TVQAAGLRSRSTENKAL-------IVSEVEKNVWPAIAVGKV 302
           +V  + +  R    + L       I   VE  V P   + + 
Sbjct: 282 SVAGSLIGGRKETQEMLDFAAEHGIKPWVE--VIPMDGINEA 321

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 63/269 (23%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA  +   G    +   E   P    ++ +++  A A   +D     G  P  +     
Sbjct: 1   MKAFAMLGIGKVGWI---EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGER----- 52

Query: 61  PGL----ECSGTILSVGKNVSRWKVGDQVCA----------------------LLGG--- 91
            G+    E  G +  VG  V  +K GD+V                        +LGG   
Sbjct: 53  HGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF 112

Query: 92  -----GGYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP---GE 141
                G +AE   V      + P+P G++ + A   P++     ST F  + L+    G+
Sbjct: 113 SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM----STGFHGAELANIKLGD 168

Query: 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 200
           +  V F          G   +G  A+   + +G  R+        ++ + K+ GA   ++
Sbjct: 169 TVAV-F----------GIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217

Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGAS 229
           YK  D V ++ + TGGKGVD ++   G  
Sbjct: 218 YKNGDVVEQILKLTGGKGVDAVIIAGGGQ 246

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 30/110 (27%)

Query: 27  DDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQV 85
             EVL++V+A  +  +D    +G  PP K   P   G E +G +  VG  V+  KVGD+V
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKL--PLILGHEGAGIVEEVGPGVTGLKVGDRV 58

Query: 86  CA------------------------LLG---GGGYAEKVAVPAGQVLPV 108
                                      LG    GG+AE V VPA  ++P+
Sbjct: 59  VVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 55/305 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATA-----LNRADTLQRKGSYPPPK 55
           M+A V         L +++V DP+    +VL+KV A       L+     +         
Sbjct: 1   MRAAVFRD----GPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGP 56

Query: 56  GASPYP-----GLECSGTILSVGKNVS-RWKVGDQVCAL-----------------LGGG 92
                      G E  G ++  G     + KVG +V +L                    G
Sbjct: 57  SLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPG 116

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           GYAE + +    +L VP G+S++DAA    +A      V   + L+PGE  LV       
Sbjct: 117 GYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVG-LHAV-RRARLTPGEVALV------- 167

Query: 153 SDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVA 208
             +  G  G+    I   K +GV  +  +  S E+ A+   +GAD+ ++   +      A
Sbjct: 168 --IGCGPIGLA--VIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA 223

Query: 209 RVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA--K 265
                 GG    VI +C+GA    Q+ +      GR+ ++   G      NI    A  K
Sbjct: 224 AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVV---GVCMESDNIEPALAIRK 280

Query: 266 RLTVQ 270
            LT+Q
Sbjct: 281 ELTLQ 285

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 71/295 (24%), Positives = 120/295 (40%), Gaps = 54/295 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ +        + E     +K  E L+K+E   +   D     G +    G    
Sbjct: 1   MKAAVVNK--DHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRIL- 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY---- 94
            G E  G +  VG  V+  KVGD+V                      C  +   GY    
Sbjct: 58  -GHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDG 116

Query: 95  --AEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVDFCS 149
             AE+  V A   + VP G+   D A    + C   T +  +   S + PG+ ++  +  
Sbjct: 117 GMAEQCIVTADYAVKVPEGL---DPAQASSITCAGVTTYKAI-KVSGIKPGQ-WIAIY-- 169

Query: 150 ISYSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCIN-YKTEDFV 207
                   G+ G+G  A+Q  K     +V     +++KLA+ K++GAD+ IN  + ED  
Sbjct: 170 --------GAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVA 221

Query: 208 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 262
             ++E+TGG    V+   +  + F + + ++   GR+  +G       +L+I  L
Sbjct: 222 KIIQEKTGGAHAAVV-TAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRL 274

Length = 338

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 67.6 bits (166), Expect = 9e-13
 Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 29/213 (13%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA+V+ +       +L+E+++  + + +V ++V  + LN  D L   G          +
Sbjct: 1   FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGK---GGIVRTF 57

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVP 109
           P   G++ +GT++       R+K GD+V  +L G        GGYA++  V A  ++P+P
Sbjct: 58  PLVPGIDLAGTVVESSS--PRFKPGDRV--VLTGWGVGERHWGGYAQRARVKADWLVPLP 113

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSH--LSPGESFLVDFCSISYSDVHGGSSGIGTFAI 167
            G+S + A A      T    V       ++PG+  ++         V G + G+G+ A+
Sbjct: 114 EGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVL---------VTGAAGGVGSVAV 164

Query: 168 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
            +    G  V  + G  E+    + LGA   I+
Sbjct: 165 ALLARLGYEVVASTGRPEEADYLRSLGASEIID 197

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 67.8 bits (166), Expect = 9e-13
 Identities = 76/286 (26%), Positives = 111/286 (38%), Gaps = 75/286 (26%)

Query: 1   MKAIVITQPGSP------EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP 54
           M+A V+ + G+P        L ++EVE       EVL+K+ A  L  +D     G  P  
Sbjct: 1   MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-- 58

Query: 55  KGASPYP---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------- 87
               P P   G E +G ++ VG+ V+  +VGD V             CA           
Sbjct: 59  ---RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA 115

Query: 88  -------LLGGG-----------------GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
                  LL GG                  +AE   V    V+ +   V L+ AA F   
Sbjct: 116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCA 175

Query: 124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG- 182
             T    V  T+ + PG+S  V            G  G+G  A+      G    V    
Sbjct: 176 VLTGVGAVVNTAGVRPGQSVAV-----------VGLGGVGLSALLGAVAAGASQVVAVDL 224

Query: 183 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228
           +E+KLA+ ++LGA   +N    + V +V+E TGG GVD   +  G+
Sbjct: 225 NEDKLALARELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGS 269

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 88/363 (24%), Positives = 137/363 (37%), Gaps = 70/363 (19%)

Query: 12  PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQ--RKGSYPPPKGASPY-PGLECSGT 68
              L+++E   P+    EV ++V A  +  +D L   + G +   +   P   G E SG 
Sbjct: 6   AGDLRVEERPAPEPGPGEVRVRVAAGGICGSD-LHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 69  ILSVGKNVSRWKVGDQV-------------CAL-----------LGG--------GGYAE 96
           + +VG  V+    G +V             C             LG         GG+ E
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124

Query: 97  KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH 156
            + V A Q +P+P G+SL+  AA  E        V     L  G+  LV           
Sbjct: 125 YLVVDASQCVPLPDGLSLR-RAALAEPLAVALHAVNRAGDL-AGKRVLVT---------- 172

Query: 157 GGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 215
            G+  IG   +   +  G   +  T  ++  LAV + +GAD  +N   +   A       
Sbjct: 173 -GAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAA----YAA 227

Query: 216 GKG-VDVILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
            KG  DV+ +  GA     + L  +   G +  +G   G    L + +L AK L ++ + 
Sbjct: 228 DKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGM-LGGPVPLPLNALVAKELDLRGS- 285

Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKI 331
              R  +  A  V          +A G+  V+P+I    PL EAAEA  L        K+
Sbjct: 286 --FRFDDEFAEAVR--------LLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKV 335

Query: 332 MLV 334
            L 
Sbjct: 336 QLS 338

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 64.8 bits (158), Expect = 1e-11
 Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 55/258 (21%)

Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT---LQRKGSYPPPKGASPYP---GLECSGT 68
           L++++V  P +K DE+LI+V+A  +  +D       K  Y    G + +P   G E SG 
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 69  ILSVGKNVSRWKVGDQVCA------------------------LLG---GGGYAEKVAVP 101
           +   GKNV  ++ GD V A                         LG    G +AE +AV 
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVN 158

Query: 102 A------GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVDFCSISYSD 154
           A       ++  + S     +A A  E     ++ +F+      PG   +V         
Sbjct: 159 ARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVV--------- 209

Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN---YKTEDFVARV 210
              G+  IG  AI + K  G  +V     SEE+  + K++GAD   N    +      +V
Sbjct: 210 --YGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKV 267

Query: 211 KEETGGKGVDVILDCMGA 228
            E T G G D+ ++  GA
Sbjct: 268 MEVTKGWGADIQVEAAGA 285

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 29/246 (11%)

Query: 12  PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILS 71
               +L E E P +KD EVL   EA  L+  D   R  S    +G     G + +  I S
Sbjct: 18  ESDFELVEEELPPLKDGEVL--CEALFLS-VDPYMRPYSKRLNEGD-TMIGTQVAKVIES 73

Query: 72  VGKNVSRWKVGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV 123
             KN S++ VG  V A  G        G    +   +PA     +P  ++L      P +
Sbjct: 74  --KN-SKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL-GVLGMPGL 129

Query: 124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183
             T +  +        GE+ +V+          G +  +G+   Q+ K +G +V   AGS
Sbjct: 130 --TAYFGLLEICKPKAGETVVVN----------GAAGAVGSLVGQIAKIKGCKVIGCAGS 177

Query: 184 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGR 243
           ++K+A  K+LG D   NYKT      +KE     G+D   D +G  +    L  +N  GR
Sbjct: 178 DDKVAWLKELGFDAVFNYKTVSLEEALKEAA-PDGIDCYFDNVGGEFSSTVLSHMNDFGR 236

Query: 244 LFIIGT 249
           + + G+
Sbjct: 237 VAVCGS 242

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 60.6 bits (147), Expect = 3e-10
 Identities = 68/300 (22%), Positives = 111/300 (37%), Gaps = 77/300 (25%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           ++ ++    G+P  L+   V DP     EV++ ++A  +   D   R+G          +
Sbjct: 2   VRGVIARSKGAPVELETIVVPDP--GPGEVIVDIQACGVCHTDLHYREGGI-----NDEF 54

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV---------------------C---------- 86
           P   G E +G + +VG+ V+    GD V                     C          
Sbjct: 55  PFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKM 114

Query: 87  ---------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA----CTVWS---T 130
                      LG G +AEK  V AGQ   V       D AA P  A    C V +    
Sbjct: 115 TLTDGTELSPALGIGAFAEKTLVHAGQCTKV-------DPAADPAAAGLLGCGVMAGLGA 167

Query: 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV 189
              T  +  G+S  V  C            G+G  AI      G  ++      + KL  
Sbjct: 168 AVNTGGVKRGDSVAVIGCG-----------GVGDAAIAGAALAGASKIIAVDIDDRKLEW 216

Query: 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIG 248
            ++ GA   +N    D V  ++  TGG G DV++D +G    +++   + ++ G + ++G
Sbjct: 217 AREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVG 276

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 86/335 (25%), Positives = 127/335 (37%), Gaps = 78/335 (23%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V  + G P V++  EV  P  K +EV IK+ AT++   D L  +G       A+ +P
Sbjct: 4   KAAVAWEAGKPLVIEEIEVAPP--KANEVRIKMLATSVCHTDILAIEG-----FKATLFP 56

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQVCALLGG------------------GGYAEKVAV 100
              G E +G + SVG+ V+  K GD+V  L  G                      E   +
Sbjct: 57  VILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM 116

Query: 101 PAGQVLPVPSG----------------------VSLKDAAAFPEVACTV---WST----V 131
           P G       G                      V+  D AA  E  C +   +ST     
Sbjct: 117 PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAA 176

Query: 132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC 190
           + T+ + PG +  V F          G   +G  AI   K  G  R+     +E+K    
Sbjct: 177 WNTAKVEPGSTVAV-F----------GLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA 225

Query: 191 KDLGADVCINYK--TEDFVARVKEETGGKGVDVILDCMGASYFQRNL--GSLNIDGRLFI 246
           K+ GA   IN K   +     ++E TGG GVD   +C G +         +    G   +
Sbjct: 226 KEFGATDFINPKDSDKPVSEVIREMTGG-GVDYSFECTGNADLMNEALESTKLGWGVSVV 284

Query: 247 IGTQGGAKTELNITSLFAKRLTVQAA---GLRSRS 278
           +G   GA+  +    L   R T + +   G +SRS
Sbjct: 285 VGVPPGAELSIRPFQLILGR-TWKGSFFGGFKSRS 318

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 79/328 (24%), Positives = 117/328 (35%), Gaps = 83/328 (25%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V+  PG P  ++  E++DP  K  EVL+K+ A+ L  +D     G  P P+    YP
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDP--KAGEVLVKLVASGLCHSDEHLVTGDLPMPR----YP 56

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-------------CA------------LLGG-- 91
              G E +G +  VG  V+  K GD V             C+            LL G  
Sbjct: 57  ILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQ 116

Query: 92  ---------------------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
                                G ++E   VP   V+ +   + L  A     V C V   
Sbjct: 117 ISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACL---VGCGVPTG 173

Query: 128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEK 186
           W +    + + PG++ +V            G  G+G  A+Q     G R V      E K
Sbjct: 174 WGSAVNIADVRPGDTVVV-----------MGIGGVGINAVQGAAVAGARKVIAVDPVEFK 222

Query: 187 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVD---VILDCMGASYFQRNLGSLNIDGR 243
                  GA        E+ V  V+E T G+G D   + +  +   +    L +    GR
Sbjct: 223 REQALKFGATHAFA-SMEEAVQLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKGGR 281

Query: 244 LFIIG----TQGGAKTELNITSLFAKRL 267
           + + G         K  L   +L  K L
Sbjct: 282 VVVTGLGPMADVDVKVNLFELTLLQKEL 309

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 56.4 bits (136), Expect = 6e-09
 Identities = 71/302 (23%), Positives = 116/302 (38%), Gaps = 61/302 (20%)

Query: 6   ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC 65
           +T+PG P  +    VE P++   +V++KV    +   D                  G E 
Sbjct: 4   MTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEI 61

Query: 66  SGTILSVGKNVSRWKVGDQV----------CALLG-----------------GGGYAEKV 98
           SG ++  G   + W +G  V          C L                    GG+A  +
Sbjct: 62  SGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHI 120

Query: 99  AVPAGQVLPV------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
            VPA  +  V       +G+ L+  +   +   T +    + + L  G+  +V       
Sbjct: 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVI------ 173

Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR-VK 211
                G+ G+G + +Q  K  G  V       EKL + K  GAD+ +N K  D  AR VK
Sbjct: 174 -----GAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPK--DKSAREVK 226

Query: 212 EETGG----KGVD----VILDCMGASYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSL 262
           +        +G+      I +C G+   Q + L  L+  G L ++G    AKTE  +++L
Sbjct: 227 KLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGY-TMAKTEYRLSNL 285

Query: 263 FA 264
            A
Sbjct: 286 MA 287

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 56.0 bits (136), Expect = 7e-09
 Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           A V+ +PG P VL+  E++DP+   DEVL+++ AT +   D + R G  P P  A    
Sbjct: 4  TAAVVREPGGPFVLEDVELDDPR--PDEVLVRIVATGICHTDLVVRDGGLPTPLPAV--L 59

Query: 62 GLECSGTILSVGKNVSRWKVGDQVC 86
          G E +G + +VG  V+  K GD V 
Sbjct: 60 GHEGAGVVEAVGSAVTGLKPGDHVV 84

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 86/393 (21%), Positives = 145/393 (36%), Gaps = 105/393 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDE-VLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA+V   PG+  V   ++V DP+I+     ++++  TA+  +D    +G      G   
Sbjct: 1   MKAVVYGGPGNVAV---EDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPG--- 54

Query: 60  YP-GLECSGTILSVGKNVSRWKVGDQVC-------------------------------- 86
              G E  G +  VG  V   KVGD+V                                 
Sbjct: 55  LVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA 114

Query: 87  ---ALLGG--GGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTVFM---TSH 136
                +G   GG AE + VP     +L +P     K+   +  ++  ++ T +     + 
Sbjct: 115 YGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLS-DIFPTGWHGLELAG 173

Query: 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA 195
           + PG++  V F          G+  +G  A      +G  RV+V     E+L + + +GA
Sbjct: 174 VQPGDTVAV-F----------GAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222

Query: 196 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS--------------LNID 241
            + I++   D V ++     G GVD  +DC+G  Y  R+ G                   
Sbjct: 223 -IPIDFSDGDPVEQILGLEPG-GVDRAVDCVG--YEARDRGGEAQPNLVLNQLIRVTRPG 278

Query: 242 GRLFIIG----------TQGGAKTELNI--TSLFAKRLTVQAAGLRSRSTENKALIVSEV 289
           G + I+G               + EL+     L+AK L+        +   N+ L     
Sbjct: 279 GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKY-NRQLR---- 333

Query: 290 EKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQ 320
                  I  G+ KP  V+   + L +A EA+ 
Sbjct: 334 -----DLILAGRAKPSFVVSHVISLEDAPEAYA 361

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 54/199 (27%), Positives = 82/199 (41%), Gaps = 46/199 (23%)

Query: 62  GLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGY----------------- 94
           G EC+G I  VG  V    VGD+V          C L   G Y                 
Sbjct: 78  GHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGS 137

Query: 95  -AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153
            A +V  PA     +P  VSL++ A    ++  V +     +++ P  + LV        
Sbjct: 138 LANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHAC--RRANIGPETNVLV-------- 187

Query: 154 DVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARV 210
               G+  IG   +   +  G  R+ +    +E+L+V K LGAD  V ++   ED  + V
Sbjct: 188 ---MGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEV 244

Query: 211 KE--ETGGKGVDVILDCMG 227
           +E  +  G G+DV  DC+G
Sbjct: 245 EEIQKAMGGGIDVSFDCVG 263

Length = 364

>gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
           L++ C +   +   V+  +  +G+   Q+ K +G +V   AGS+EK+A  K LG DV  N
Sbjct: 130 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFN 189

Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           YKT   +    ++    G D   D +G  +    +G +   GR+ I G
Sbjct: 190 YKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 237

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 80/313 (25%), Positives = 127/313 (40%), Gaps = 75/313 (23%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK+IVI +P S   L ++E   PQ    EV +KV+   +  +D+   +G  P  K    Y
Sbjct: 1   MKSIVIEKPNS---LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 53

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG--- 90
           P   G E  G I +VG+ V   ++G++V             C++           LG   
Sbjct: 54  PRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHR 113

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP--EVACTVWSTVFMTSHLSPGESFLVDFC 148
            GG++E   VPA     +P  ++ + A       +A  V      T    P E    D  
Sbjct: 114 DGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANV------TGRTGPTEQ---DVA 164

Query: 149 SISYSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGS-EEKLAVCKDLGADVCINYKTEDF 206
            I       G+  +G   +Q+ K    V+  + A   +E+LA+ K+ GAD  IN   E  
Sbjct: 165 LIY------GAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEP- 217

Query: 207 VARVKEETGGKGVD--VILDCMG-ASYFQRNLGSLNIDGRLFIIG---------TQGGAK 254
              + E    KG+   +I+D     S  +  +   +   R+ ++G          QG   
Sbjct: 218 ---LGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITG 274

Query: 255 TELNITSLFAKRL 267
            EL   S+F+ RL
Sbjct: 275 KEL---SIFSSRL 284

Length = 339

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 97/375 (25%), Positives = 153/375 (40%), Gaps = 70/375 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A VI  PG    ++++EV DP I +  + +I+V AT +  +D    +G   P +  +P
Sbjct: 1   MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRG-VSPTRAPAP 56

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLG------GG 92
             G E  G +  VG  V+  K GD V                     C   G       G
Sbjct: 57  I-GHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDG 115

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-------LSPGESFLV 145
           G  E V VP      V    S  D          + S V  T H       + PG + +V
Sbjct: 116 GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL-SDVMGTGHHAAVSAGVRPGSTVVV 174

Query: 146 DFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE 204
                       G   +G  A+   K  G  R+   +  E++ A+ ++ GA   +  + E
Sbjct: 175 V-----------GDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGE 223

Query: 205 DFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSL 262
           + VARV+E TGG G D +L+C+G     ++ +      GR+  +G   GG   EL++  L
Sbjct: 224 EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG--VELDVREL 281

Query: 263 FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQ 320
           F + + + A G          L+           +  G++ P  V    LPL E AE ++
Sbjct: 282 FFRNVGL-AGGPAPVRRYLPELL---------DDVLAGRINPGRVFDLTLPLDEVAEGYR 331

Query: 321 LMESSQHIGKIMLVP 335
            M+  + I K++L P
Sbjct: 332 AMDERRAI-KVLLRP 345

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 64/232 (27%), Positives = 93/232 (40%), Gaps = 53/232 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MK++V    G    +++ E   P+IK  D+VL+KV ++ L  +D + R        GA  
Sbjct: 1   MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSD-IPRIFK----NGAHY 52

Query: 60  YP---GLECSGTILSVGKNVSRWKVGDQV-CALL-------------------------- 89
           YP   G E SG + +VG  V     GD V C  L                          
Sbjct: 53  YPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSR 112

Query: 90  GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             GG AE + V    +  +P+ + ++D A    +  TV    F   HL+ G       C 
Sbjct: 113 RDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPI--TVGLHAF---HLAQG-------CE 160

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCIN 200
              + +  G+  IG  AIQ     G + V     + EKLA+ K LGA    N
Sbjct: 161 -GKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFN 211

Length = 347

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 61/241 (25%), Positives = 94/241 (39%), Gaps = 31/241 (12%)

Query: 45  LQRKGSYPPPKGASPY-PGLECSGTILSVGKNV----SRWKVGDQVCALLGGGGYAEKVA 99
             R   +       P+ PG   +G    V K V      +KVGD V    G  G+ E   
Sbjct: 54  RGRMKGHDDSLYLPPFKPGEVITG--YGVAKVVDSGNPDFKVGDLV---WGFTGWEEYSL 108

Query: 100 VPAGQVLPV--PSGVSLKD-AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH 156
           +P GQ L     + V L            T ++  +       GE+  V           
Sbjct: 109 IPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVS---------- 158

Query: 157 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTE-DFVARVKEET 214
             S  +G    Q+ K +G  V  +AGS+EK+ + K+ LG D   NYK E D  A +K   
Sbjct: 159 AASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYF 218

Query: 215 GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG-----TQGGAKTELNITSLFAKRLTV 269
              G+D+  D +G       L ++N+ GR+   G          +   N+ ++  KR+ +
Sbjct: 219 -PNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKI 277

Query: 270 Q 270
           Q
Sbjct: 278 Q 278

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 184 EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDG 242
           + +L + K+LGA   IN K ED VA ++E TGG GVD  LD  G  +  ++ + +L   G
Sbjct: 221 DSRLELAKELGATHVINPKEEDLVAAIREITGG-GVDYALDTTGVPAVIEQAVDALAPRG 279

Query: 243 RLFIIGTQG-GAKTELNITSLFAKRLTVQ 270
            L ++G    GA+  L++  L     T++
Sbjct: 280 TLALVGAPPPGAEVTLDVNDLLVSGKTIR 308

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 47.1 bits (112), Expect = 6e-06
 Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 66/264 (25%)

Query: 28  DEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQ 84
           ++V+IKV    +   D  Q K       G S YP   G E  G ++ VG +VS++ VGD 
Sbjct: 35  EDVVIKVIYCGICHTDLHQIKNDL----GMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDI 90

Query: 85  V-CALLGG----------------------------------GGYAEKVAVPAGQVLPVP 109
           V   ++ G                                  GG+A  + V    V+ +P
Sbjct: 91  VGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIP 150

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS---SGIGTFA 166
            G++ + AA       TV+S +   SH             +  S + GG     G+G   
Sbjct: 151 EGMAPEQAAPLLCAGVTVYSPL---SHF-----------GLKQSGLRGGILGLGGVGHMG 196

Query: 167 IQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 225
           +++ K  G  V V + S++K     + LGAD   +Y      A ++E      +D I+D 
Sbjct: 197 VKIAKAMGHHVTVISSSDKKREEALEHLGAD---DYLVSSDAAEMQE--AADSLDYIIDT 251

Query: 226 MGASY-FQRNLGSLNIDGRLFIIG 248
           +   +  +  L  L +DG+L ++G
Sbjct: 252 VPVFHPLEPYLSLLKLDGKLILMG 275

Length = 357

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 46.8 bits (112), Expect = 7e-06
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
          KA V  + G P  L ++EVE    K  EV IK+ AT +   D     G+   P+G  P  
Sbjct: 4  KAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGA--DPEGLFPVI 59

Query: 61 PGLECSGTILSVGKNVSRWKVGDQVCAL 88
           G E +G + SVG+ V+  K GD V  L
Sbjct: 60 LGHEGAGIVESVGEGVTSVKPGDHVIPL 87

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional

 Score = 46.8 bits (111), Expect = 9e-06
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEE 213
           V   S  +G    Q+ K  G  V  +AGS +K+ + K+ LG D   NYK E  +    + 
Sbjct: 164 VSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKR 223

Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG-----TQGGAKTELNITSLFAKRLT 268
              +G+D+  D +G       L ++ I GR+ + G     +   ++   N+ +L +KR+ 
Sbjct: 224 YFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIR 283

Query: 269 VQ 270
           +Q
Sbjct: 284 MQ 285

Length = 348

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 54/226 (23%)

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA--LLGG--------------------------- 91
           PG E  G    VGKNV+++K GD+V    ++G                            
Sbjct: 64  PGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSS 123

Query: 92  ------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV-FMTSHLSPGESFL 144
                 GGY++ + V    VL +P G+     A       TV+S + +       G+   
Sbjct: 124 DGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLG 183

Query: 145 VDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT 203
           V+           G  G+G  A+++GK  G+RV V + S EK     D LGAD   ++  
Sbjct: 184 VN-----------GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD---SFLV 229

Query: 204 EDFVARVKEETGGKGVDVILDCMGASYFQRNLGS-LNIDGRLFIIG 248
                ++KE  G   +D I+D + A +    L S L + G+L  +G
Sbjct: 230 TTDSQKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALG 273

Length = 375

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
          KA V+ +P  P    ++E+E    K  EV IK+ AT + R+D     G        +P+P
Sbjct: 9  KAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL-----VTPFP 61

Query: 62 ---GLECSGTILSVGKNVSRWKVGDQVCAL 88
             G E +G + SVG+ V+  K GD+V  L
Sbjct: 62 VILGHEAAGIVESVGEGVTTVKPGDKVIPL 91

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 60/262 (22%)

Query: 27  DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGD 83
           D++V +K+    +  +D    K  +    G + YP   G E  G +  +GKNV ++K GD
Sbjct: 37  DEDVTVKILYCGVCHSDLHTIKNEW----GFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD 92

Query: 84  QV-CALLGG----------------------------------GGYAEKVAVPAGQVLPV 108
           +V   ++ G                                  GGY++ + V    VL  
Sbjct: 93  RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRF 152

Query: 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQ 168
           P  + L   A       TV+S +       PG+   V            G  G+G  A++
Sbjct: 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGV-----------AGLGGLGHVAVK 201

Query: 169 MGKCQGVRVFVTAGSEEKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227
           +GK  G++V V + S  K       LGAD      T+    ++K   G   +D I+D + 
Sbjct: 202 IGKAFGLKVTVISSSSNKEDEAINRLGAD-SFLVSTDP--EKMKAAIG--TMDYIIDTVS 256

Query: 228 ASY-FQRNLGSLNIDGRLFIIG 248
           A +     LG L ++G+L  +G
Sbjct: 257 AVHALGPLLGLLKVNGKLITLG 278

Length = 360

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 78/346 (22%), Positives = 122/346 (35%), Gaps = 71/346 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+V+        L+++++  P+    E L++V    +   D    KG YP P G    
Sbjct: 1   MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFP-GV--- 53

Query: 61  PGLECSGTILS------VGKNV-SRWKVGDQVCAL--------------LG----GGGYA 95
           PG E  G +        VGK V     +    C                LG     G +A
Sbjct: 54  PGHEFVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFA 113

Query: 96  EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV 155
           E + +P   +  VP  V   + A F E        +     ++PG+   V          
Sbjct: 114 EYLTLPLENLHVVPDLVP-DEQAVFAEPLAAALEILEQ-VPITPGDKVAVL--------- 162

Query: 156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 215
             G   +G    Q+    G  V +     EKLA+ + LG +  +           + E+ 
Sbjct: 163 --GDGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPD---------EAESE 211

Query: 216 GKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL 274
           G G DV+++  G  S  +  L  +   G + +  T  G     ++T      +T+   G 
Sbjct: 212 GGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITL--VGS 268

Query: 275 RSRSTENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEA 318
           R       AL            +  G V   P+I    PL EA EA
Sbjct: 269 RCGPFA-PAL----------RLLRKGLVDVDPLITAVYPLEEALEA 303

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKE 212
           V G +   G+ A Q+G+  G  RV    GS+EK  + K +LG D  INYKT++   R++ 
Sbjct: 160 VSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLR- 218

Query: 213 ETGGKGVDVILDCMG 227
           E   +GVDV  D +G
Sbjct: 219 ELCPEGVDVYFDNVG 233

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 44.8 bits (106), Expect = 4e-05
 Identities = 69/277 (24%), Positives = 101/277 (36%), Gaps = 66/277 (23%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           +A V    G P  L+++EV+    +  EVL+++ AT +   D     G+   P+G  P  
Sbjct: 3   RAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGA--DPEGVFPVI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV----------CALLGGGGYAEKVAVPAGQ------ 104
            G E +G + +VG+ V+  KVGD V          C     G     VAV   Q      
Sbjct: 59  LGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMP 118

Query: 105 --------------------------VLPVPSGVSLKDAAAFPEV---ACTVWS---TVF 132
                                     V+P  S   +  AA   EV    C V +    V 
Sbjct: 119 DGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVL 178

Query: 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 191
            T+ +  G++  V            G  GIG   IQ  +     R+     +  K  + K
Sbjct: 179 NTAKVEEGDTVAV-----------FGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAK 227

Query: 192 DLGADVCINYKTEDF-VARVKEETGGKGVDVILDCMG 227
            LGA  C+N    D  +  V  E    GVD   +C+G
Sbjct: 228 KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIG 264

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 59/298 (19%), Positives = 95/298 (31%), Gaps = 69/298 (23%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-PPKGASP 59
           MKAI +  PG P V ++ ++ +P+    EVL++     +   D     G Y   P G   
Sbjct: 1   MKAIAVK-PGKPGV-RVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPG-ED 57

Query: 60  Y--PGLECSGTILSVGKNVSRWKVGDQVCALL---------------------------- 89
           +   G E  G +  VG   S    GD V   +                            
Sbjct: 58  FLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGI 116

Query: 90  -GGGGY-AEKVAVPAGQVLPVPSGVS--------LKDAAAFPEVACTVWSTVFMTSHLSP 139
            G  G+  E        ++ VP  ++        L       E A  V            
Sbjct: 117 KGLHGFMREYFVDDPEYLVKVPPSLADVGVLLEPLSVVEKAIEQAEAV------------ 164

Query: 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGAD 196
            +         +   V G    IG  A  + + +G  V+V       + K  + ++LGA 
Sbjct: 165 QKRLPTWNPRRAL--VLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGAT 221

Query: 197 VCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA 253
             +N         V E       D+I++  G        L +L  +G + + G  GG 
Sbjct: 222 Y-VNSSKTP----VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGG 274

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 67/252 (26%), Positives = 104/252 (41%), Gaps = 46/252 (18%)

Query: 14  VLQLQEVEDPQIKDDEVLIKVEATALNRAD-TLQRKGSYPP--PKGASPYP---GLECSG 67
            L+L++ E P+I DDE+L++V + +L  +   L  +GS     P   +  P   G E +G
Sbjct: 13  DLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAG 72

Query: 68  TILSVGKNVS-RWKVGDQV-----CALLGG-----------GGYAEKVAVPA----GQVL 106
           TIL VGK    ++K G +        L  G           GG A    +P        L
Sbjct: 73  TILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCL 132

Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI---SYSDVHGGSSGIG 163
            +  G    +A+    ++C V        HL PGE        I     + + GG+  +G
Sbjct: 133 LIYEGDGYAEASLVEPLSC-VIGAYTANYHLQPGEY--RHRMGIKPGGNTAILGGAGPMG 189

Query: 164 TFAIQM---GKCQGVRVFVTAGSEEKLAVCKDL--------GADV-CINYKTED-FVARV 210
             AI     G      + VT  ++E+LA  + L        G ++  +N  T D   A +
Sbjct: 190 LMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATL 249

Query: 211 KEETGGKGVDVI 222
            E TGG+G D +
Sbjct: 250 MELTGGQGFDDV 261

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
          +A V    G   V++  EV  PQ    E+ IKV +T+L R+D    +     P+      
Sbjct: 14 RAAVAWGAGEALVMEEVEVSPPQPL--EIRIKVVSTSLCRSDLSAWESQALFPR----IF 67

Query: 62 GLECSGTILSVGKNVSRWKVGDQVCALLGG 91
          G E SG + S+G+ V+ ++ GD V  +  G
Sbjct: 68 GHEASGIVESIGEGVTEFEKGDHVLTVFTG 97

Length = 378

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 2  KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
          KA V  + G P V++  EV  PQ    EV IK+  T+L   D    +     P     +P
Sbjct: 4  KAAVAWEAGKPLVIEEVEVAPPQAM--EVRIKILHTSLCHTDVYFWEAKGQTPL----FP 57

Query: 62 ---GLECSGTILSVGKNVSRWKVGDQV 85
             G E +G + SVG+ V+  K GD V
Sbjct: 58 RILGHEAAGIVESVGEGVTDLKPGDHV 84

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	100.0
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.96
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.75
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.72
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.54
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.29
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.17
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.26
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.2
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.19
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.96
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.82
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.79
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.74
PLN02494	477	adenosylhomocysteinase	97.72
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.66
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.61
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.54
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.46
PRK08324	681	short chain dehydrogenase; Validated	97.42
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.36
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.25
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.24
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.24
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.15
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.13
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.12
PRK12742	237	oxidoreductase; Provisional	97.08
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.07
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.99
PRK06198	260	short chain dehydrogenase; Provisional	96.98
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.87
PRK06182	273	short chain dehydrogenase; Validated	96.84
PRK05693	274	short chain dehydrogenase; Provisional	96.82
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	96.81
PRK05993	277	short chain dehydrogenase; Provisional	96.77
PRK07060	245	short chain dehydrogenase; Provisional	96.74
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.73
PRK06139	330	short chain dehydrogenase; Provisional	96.71
PLN03209	576	translocon at the inner envelope of chloroplast su	96.68
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.63
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.57
PRK08265	261	short chain dehydrogenase; Provisional	96.56
PRK12939	250	short chain dehydrogenase; Provisional	96.54
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	96.52
PRK07806	248	short chain dehydrogenase; Provisional	96.51
PRK08177	225	short chain dehydrogenase; Provisional	96.5
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.46
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.42
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.39
PRK07109	334	short chain dehydrogenase; Provisional	96.34
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.3
PRK12829	264	short chain dehydrogenase; Provisional	96.21
PRK05872	296	short chain dehydrogenase; Provisional	96.19
PRK06953	222	short chain dehydrogenase; Provisional	96.19
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.17
PLN02780	320	ketoreductase/ oxidoreductase	96.16
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.16
TIGR00438	188	rrmJ cell division protein FtsJ.	96.16
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.12
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.1
PRK05866	293	short chain dehydrogenase; Provisional	96.1
PRK07831	262	short chain dehydrogenase; Provisional	96.07
PRK08017	256	oxidoreductase; Provisional	96.03
PRK06484	520	short chain dehydrogenase; Validated	96.02
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.01
PRK06128	300	oxidoreductase; Provisional	96.01
PRK08339	263	short chain dehydrogenase; Provisional	95.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.95
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.95
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.93
PRK07814	263	short chain dehydrogenase; Provisional	95.92
PRK06057	255	short chain dehydrogenase; Provisional	95.9
PRK07904	253	short chain dehydrogenase; Provisional	95.89
PRK06949	258	short chain dehydrogenase; Provisional	95.89
PRK07832	272	short chain dehydrogenase; Provisional	95.88
COG4122	219	Predicted O-methyltransferase [General function pr	95.88
PRK06196	315	oxidoreductase; Provisional	95.87
PRK09291	257	short chain dehydrogenase; Provisional	95.84
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.83
COG2910	211	Putative NADH-flavin reductase [General function p	95.82
PRK04148	134	hypothetical protein; Provisional	95.82
PRK06194	287	hypothetical protein; Provisional	95.82
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	95.76
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.74
PRK06180	277	short chain dehydrogenase; Provisional	95.73
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.72
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.69
PRK05854	313	short chain dehydrogenase; Provisional	95.69
PRK12367	245	short chain dehydrogenase; Provisional	95.68
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.67
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.67
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.67
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	95.65
PRK05867	253	short chain dehydrogenase; Provisional	95.64
PRK06500	249	short chain dehydrogenase; Provisional	95.64
PRK07890	258	short chain dehydrogenase; Provisional	95.63
PRK06841	255	short chain dehydrogenase; Provisional	95.62
PRK06720	169	hypothetical protein; Provisional	95.6
PRK07576	264	short chain dehydrogenase; Provisional	95.59
PRK08267	260	short chain dehydrogenase; Provisional	95.57
PRK07825	273	short chain dehydrogenase; Provisional	95.56
PRK09072	263	short chain dehydrogenase; Provisional	95.55
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.55
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	95.54
PRK07478	254	short chain dehydrogenase; Provisional	95.53
PLN02476	278	O-methyltransferase	95.53
PRK08628	258	short chain dehydrogenase; Provisional	95.53
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.52
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.49
PRK06181	263	short chain dehydrogenase; Provisional	95.49
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.49
PRK07063	260	short chain dehydrogenase; Provisional	95.42
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.41
PRK06172	253	short chain dehydrogenase; Provisional	95.39
PRK07062	265	short chain dehydrogenase; Provisional	95.39
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.36
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.35
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.33
PRK06484	520	short chain dehydrogenase; Validated	95.31
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.3
PRK10538	248	malonic semialdehyde reductase; Provisional	95.29
PRK06138	252	short chain dehydrogenase; Provisional	95.29
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.29
PRK12937	245	short chain dehydrogenase; Provisional	95.28
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	95.27
PRK05876	275	short chain dehydrogenase; Provisional	95.27
KOG0725	270	consensus Reductases with broad range of substrate	95.25
PRK06125	259	short chain dehydrogenase; Provisional	95.23
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.2
PRK07677	252	short chain dehydrogenase; Provisional	95.17
PRK07067	257	sorbitol dehydrogenase; Provisional	95.15
PRK06114	254	short chain dehydrogenase; Provisional	95.15
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.14
PRK09242	257	tropinone reductase; Provisional	95.14
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.14
PRK05884	223	short chain dehydrogenase; Provisional	95.12
PRK07024	257	short chain dehydrogenase; Provisional	95.12
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.11
PRK07774	250	short chain dehydrogenase; Provisional	95.11
PRK06197	306	short chain dehydrogenase; Provisional	95.11
PRK08264	238	short chain dehydrogenase; Validated	95.09
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.09
PRK06101	240	short chain dehydrogenase; Provisional	95.08
PRK08862	227	short chain dehydrogenase; Provisional	95.08
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.08
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.08
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.08
PRK11207	197	tellurite resistance protein TehB; Provisional	95.05
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.04
PRK05875	276	short chain dehydrogenase; Provisional	95.04
PRK08589	272	short chain dehydrogenase; Validated	95.03
PRK06482	276	short chain dehydrogenase; Provisional	95.02
PRK08226	263	short chain dehydrogenase; Provisional	95.0
PRK08643	256	acetoin reductase; Validated	94.99
PRK07326	237	short chain dehydrogenase; Provisional	94.98
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.98
PRK07454	241	short chain dehydrogenase; Provisional	94.97
PRK05717	255	oxidoreductase; Validated	94.95
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.92
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.9
PRK12828	239	short chain dehydrogenase; Provisional	94.89
PRK05650	270	short chain dehydrogenase; Provisional	94.88
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.88
PRK08703	239	short chain dehydrogenase; Provisional	94.85
PRK08303	305	short chain dehydrogenase; Provisional	94.85
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	94.84
CHL00194	317	ycf39 Ycf39; Provisional	94.83
PRK07856	252	short chain dehydrogenase; Provisional	94.82
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.8
PRK06179	270	short chain dehydrogenase; Provisional	94.8
PRK09186	256	flagellin modification protein A; Provisional	94.79
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.79
PRK07074	257	short chain dehydrogenase; Provisional	94.77
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.77
PRK07035	252	short chain dehydrogenase; Provisional	94.76
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.76
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.74
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.69
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	94.67
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.66
PRK08263	275	short chain dehydrogenase; Provisional	94.64
PLN02253	280	xanthoxin dehydrogenase	94.64
PRK12747	252	short chain dehydrogenase; Provisional	94.63
PLN00016	378	RNA-binding protein; Provisional	94.63
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.61
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	94.6
PRK07791	286	short chain dehydrogenase; Provisional	94.6
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	94.6
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.59
PRK06398	258	aldose dehydrogenase; Validated	94.54
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.53
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.52
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.47
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.46
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	94.45
PRK07985	294	oxidoreductase; Provisional	94.45
PRK08278	273	short chain dehydrogenase; Provisional	94.42
PRK12743	256	oxidoreductase; Provisional	94.4
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	94.37
PRK14967	223	putative methyltransferase; Provisional	94.35
PRK08251	248	short chain dehydrogenase; Provisional	94.35
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.34
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.32
PRK07577	234	short chain dehydrogenase; Provisional	94.31
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.31
PLN03075	296	nicotianamine synthase; Provisional	94.28
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.26
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.25
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.24
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.24
KOG1208	314	consensus Dehydrogenases with different specificit	94.22
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.21
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.2
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.19
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.17
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.17
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.17
KOG1252	362	consensus Cystathionine beta-synthase and related	94.16
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.15
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.14
PLN02244	340	tocopherol O-methyltransferase	94.13
PRK06914	280	short chain dehydrogenase; Provisional	94.11
PRK08618	325	ornithine cyclodeaminase; Validated	94.07
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.05
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.01
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	94.01
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	93.95
PRK08219	227	short chain dehydrogenase; Provisional	93.94
PRK06719	157	precorrin-2 dehydrogenase; Validated	93.93
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.92
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	93.92
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	93.91
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.89
PRK07775	274	short chain dehydrogenase; Provisional	93.88
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	93.88
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	93.84
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.79
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.77
PRK06523	260	short chain dehydrogenase; Provisional	93.77
PRK06483	236	dihydromonapterin reductase; Provisional	93.75
PRK07102	243	short chain dehydrogenase; Provisional	93.74
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.73
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	93.7
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	93.69
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	93.68
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	93.67
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	93.67
PRK06701	290	short chain dehydrogenase; Provisional	93.64
PRK05855	582	short chain dehydrogenase; Validated	93.61
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.6
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.56
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.56
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.54
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.53
PRK07402	196	precorrin-6B methylase; Provisional	93.52
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	93.51
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.5
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	93.47
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.47
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	93.46
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	93.41
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.38
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.31
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	93.3
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.27
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	93.27
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.25
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	93.15
PRK08936	261	glucose-1-dehydrogenase; Provisional	93.13
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	93.13
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	93.12
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.11
PRK08317	241	hypothetical protein; Provisional	93.07
PLN02653	340	GDP-mannose 4,6-dehydratase	93.04
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	93.04
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	93.01
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	92.95
PRK00811	283	spermidine synthase; Provisional	92.94
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	92.93
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	92.93
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	92.93
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	92.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	92.89
PRK07041	230	short chain dehydrogenase; Provisional	92.88
PRK12746	254	short chain dehydrogenase; Provisional	92.82
PLN02896	353	cinnamyl-alcohol dehydrogenase	92.8
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	92.78
PLN02233	261	ubiquinone biosynthesis methyltransferase	92.76
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	92.75
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	92.64
PRK12548	289	shikimate 5-dehydrogenase; Provisional	92.64
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.57
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	92.57
PLN02214	342	cinnamoyl-CoA reductase	92.56
PRK12827	249	short chain dehydrogenase; Provisional	92.54
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	92.52
PRK08655	437	prephenate dehydrogenase; Provisional	92.48
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	92.46
PRK12744	257	short chain dehydrogenase; Provisional	92.42
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	92.41
COG0569	225	TrkA K+ transport systems, NAD-binding component [	92.41
PRK09135	249	pteridine reductase; Provisional	92.41
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	92.37
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	92.36
PRK05599	246	hypothetical protein; Provisional	92.34
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	92.33
PRK07023	243	short chain dehydrogenase; Provisional	92.3
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.27
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	92.25
PRK07069	251	short chain dehydrogenase; Validated	92.21
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	92.21
PRK07574	385	formate dehydrogenase; Provisional	92.18
PRK06940	275	short chain dehydrogenase; Provisional	92.16
PRK07201	657	short chain dehydrogenase; Provisional	92.14
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	92.1
PRK07340	304	ornithine cyclodeaminase; Validated	92.07
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	92.06
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	92.04
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	92.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	91.95
PRK07417	279	arogenate dehydrogenase; Reviewed	91.92
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	91.91
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	91.9
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	91.87
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	91.87
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	91.87
PRK04457	262	spermidine synthase; Provisional	91.85
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	91.83
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	91.82
PRK09134	258	short chain dehydrogenase; Provisional	91.81
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	91.71
PRK03659	601	glutathione-regulated potassium-efflux system prot	91.64
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	91.61
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	91.57
PLN02928	347	oxidoreductase family protein	91.55
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	91.54
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.52
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.5
PF05724	218	TPMT: Thiopurine S-methyltransferase (TPMT); Inter	91.48
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.42
PRK10669	558	putative cation:proton antiport protein; Provision	91.38
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	91.38
PLN02240	352	UDP-glucose 4-epimerase	91.35
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	91.3
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.29
PRK03562	621	glutathione-regulated potassium-efflux system prot	91.28
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	91.27
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	91.27
PRK04266	226	fibrillarin; Provisional	91.25
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.23
PRK13243	333	glyoxylate reductase; Reviewed	91.21
PLN03139	386	formate dehydrogenase; Provisional	91.18
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.11
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	91.09
PLN02686	367	cinnamoyl-CoA reductase	91.09
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	91.08
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	91.02
PRK14968	188	putative methyltransferase; Provisional	91.01
PLN00015	308	protochlorophyllide reductase	90.99
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	90.99
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	90.91
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	90.91
PRK01581	374	speE spermidine synthase; Validated	90.84
PRK06141	314	ornithine cyclodeaminase; Validated	90.83
PRK10258	251	biotin biosynthesis protein BioC; Provisional	90.8
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	90.75
PRK13403	335	ketol-acid reductoisomerase; Provisional	90.7
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	90.68
PRK06947	248	glucose-1-dehydrogenase; Provisional	90.65
PLN02427	386	UDP-apiose/xylose synthase	90.65
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	90.62
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.62
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	90.59
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	90.59
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	90.56

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=8e-56  Score=392.36  Aligned_cols=305  Identities=36%  Similarity=0.538  Sum_probs=279.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++.++++|  +++.+.+.|+|.++||+|+|.|+|+|++|+|.++|.++... +|++||||.+|+|+++|++|++|+
T Consensus         4 mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             eEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEEEecCCCccCC
Confidence            899999999988  99999999999999999999999999999999999998766 899999999999999999999999


Q ss_pred             CCCEEEE----------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||||..                            +..+|+|+||+++++.+++++|+++++++||.+.|++.|+|++| 
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-  159 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-  159 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-
Confidence            9999953                            22469999999999999999999999999999999999999999 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      +..++.||++|+|          .| .|++|++++|+|+++|++|+++++++++.+.++++|++++++.++.++.+.+++
T Consensus       160 k~~~~~pG~~V~I----------~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~  228 (339)
T COG1064         160 KKANVKPGKWVAV----------VG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKE  228 (339)
T ss_pred             hhcCCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHh
Confidence            5599999999999          88 689999999999999999999999999999999999999999887777777665


Q ss_pred             HhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC-CCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                      .     +|+++|+++...+..+++.|+++|+++++|... .....++...+..+++++.|+...++.+.          +
T Consensus       229 ~-----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~----------~  293 (339)
T COG1064         229 I-----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADL----------E  293 (339)
T ss_pred             h-----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHH----------H
Confidence            3     999999999666899999999999999999985 45566888889999999999998875432          2


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .++++..+|+++|.+.+.++++++++|++.|++++..|++||++
T Consensus       294 e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         294 EALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             HHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence            28999999999999978999999999999999999999999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=2.3e-54  Score=391.70  Aligned_cols=321  Identities=43%  Similarity=0.700  Sum_probs=291.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++...++|++++++|.|.|.|.+|||+|||.+++||+.|..++.|..+....+|++||.|++|+|+++|++++.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            89999999999988999999999999999999999999999999999998555556899999999999999999999999


Q ss_pred             CCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790           81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      +||+|+...   .+|+|+||+.+|++.++++|+++++++||+++..++|||+++....++++|++|||          +|
T Consensus        81 ~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV----------~g  150 (326)
T COG0604          81 VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLV----------HG  150 (326)
T ss_pred             CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------ec
Confidence            999999996   67999999999999999999999999999999999999999999899999999999          99


Q ss_pred             ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcc
Q 019790          158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS  237 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (335)
                      |+|++|.+++|+||++|+++++++.++++.++++++|+++++++.+.+|.+.++++++++++|+|||++|++.+...+.+
T Consensus       151 aaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~  230 (326)
T COG0604         151 AAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAA  230 (326)
T ss_pred             CCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHH
Confidence            99999999999999999887787778888889999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCEEEEEeccC-CCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790          238 LNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA  316 (335)
Q Consensus       238 l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~  316 (335)
                      |+++|+++.+|... .....++...++.+.++..+.....+   +. +...+.++.+.+++.+|.+++.+..+|+|+|..
T Consensus       231 l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~-~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~  306 (326)
T COG0604         231 LAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DP-EALAEALAELFDLLASGKLKPVIDRVYPLAEAP  306 (326)
T ss_pred             hccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---ch-HHHHHHHHHHHHHHHcCCCcceeccEechhhhH
Confidence            99999999999887 44455667777788888888877655   11 455667777999999999999999999999966


Q ss_pred             HHHHHHHh-CCCceeEEEeC
Q 019790          317 EAHQLMES-SQHIGKIMLVP  335 (335)
Q Consensus       317 ~a~~~~~~-~~~~gkvvi~~  335 (335)
                      ++..+... ++..||+|+++
T Consensus       307 ~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         307 AAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHHHHHHcccCCcceEEEeC
Confidence            66554433 48889999975

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=3.4e-50  Score=333.72  Aligned_cols=321  Identities=33%  Similarity=0.528  Sum_probs=295.0

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      |.+++++.|..+++++++.|.|+|+++|++||..|+|+|.-|.....|-+. +...|++||-|.+|+|+++|.++++|++
T Consensus        10 k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkv   88 (336)
T KOG1197|consen   10 KCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKV   88 (336)
T ss_pred             eEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCcccccc
Confidence            678899999999999999999999999999999999999999999999874 4557999999999999999999999999


Q ss_pred             CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG  161 (335)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~  161 (335)
                      ||||.-+.+-|.|+++..+|...++++|+.+++.+||++...+.|||..+++..++++|++||+          +.++|+
T Consensus        89 GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlv----------haAAGG  158 (336)
T KOG1197|consen   89 GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLV----------HAAAGG  158 (336)
T ss_pred             ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------Eecccc
Confidence            9999999888999999999999999999999999999999999999999999999999999999          999999


Q ss_pred             HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCC
Q 019790          162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  241 (335)
Q Consensus       162 ~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~  241 (335)
                      +|++++|++++.|++++.++.+.++++.+++.|+.+.++++.+++.+++.+.++++|+|+++|.+|.+.+...+.+|++.
T Consensus       159 VGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~  238 (336)
T KOG1197|consen  159 VGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPM  238 (336)
T ss_pred             HHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 019790          242 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  321 (335)
Q Consensus       242 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~  321 (335)
                      |.++++|...+...+++...+..+.+++.-..+..+..-+  ..+.....+++.++-+|.+++.+.++|||+++.+|+.+
T Consensus       239 G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~--~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~d  316 (336)
T KOG1197|consen  239 GKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGE--VELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHAD  316 (336)
T ss_pred             ceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCH--HHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHH
Confidence            9999999988876677777777778777655554442211  12333556688899999999999999999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 019790          322 MESSQHIGKIMLVP  335 (335)
Q Consensus       322 ~~~~~~~gkvvi~~  335 (335)
                      +++..+.||+++.|
T Consensus       317 iesrktvGkvlLlp  330 (336)
T KOG1197|consen  317 IESRKTVGKVLLLP  330 (336)
T ss_pred             HHhhhccceEEEeC
Confidence            99999999999865

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.5e-47  Score=324.99  Aligned_cols=306  Identities=26%  Similarity=0.389  Sum_probs=268.3

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ++|++..++++..+++.+.+.|++.++||+|+++|+|||++|+|.+.|.++. ..+|.++|||.+|+|+++|++|++|++
T Consensus        11 ~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~ki   89 (360)
T KOG0023|consen   11 FGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKI   89 (360)
T ss_pred             EEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccc
Confidence            5888999988777889999999999999999999999999999999999988 678999999999999999999999999


Q ss_pred             CCEEEE-------------------ec----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790           82 GDQVCA-------------------LL----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        82 Gd~V~~-------------------~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  126 (335)
                      ||+|-.                   +|                ..|+|++|+++++..++++|++++.+.||.+.|+..|
T Consensus        90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGIT  169 (360)
T KOG0023|consen   90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGIT  169 (360)
T ss_pred             cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceE
Confidence            999821                   11                2367999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhHHHHHHcCCCEEEeCC-Cc
Q 019790          127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVCINYK-TE  204 (335)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~~~g~~~~~~~~-~~  204 (335)
                      +|.+| ...++.||+++-|          .| .|++|++++|+||++|.+|+++.++. ++.+.++.+|++..++.. +.
T Consensus       170 vYspL-k~~g~~pG~~vgI----------~G-lGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~  237 (360)
T KOG0023|consen  170 VYSPL-KRSGLGPGKWVGI----------VG-LGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP  237 (360)
T ss_pred             Eeehh-HHcCCCCCcEEEE----------ec-CcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence            99999 6678889999999          88 56699999999999999999999987 566666789999988887 78


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL  284 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (335)
                      ++.+.+.+.+++ .+|-+.+. ....+..++..|+++|+++++|.+.. ...++..++..+++++.|+....+...+   
T Consensus       238 d~~~~~~~~~dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~ket~---  311 (360)
T KOG0023|consen  238 DIMKAIMKTTDG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSRKETQ---  311 (360)
T ss_pred             HHHHHHHHhhcC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccHHHHH---
Confidence            888888877654 34444444 23457889999999999999998886 5788888999999999999998775332   


Q ss_pred             HHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          285 IVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       285 ~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                             +++++..++.+++.+ +..+++++++|++.|++++..+|.|++
T Consensus       312 -------E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD  353 (360)
T KOG0023|consen  312 -------EALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVD  353 (360)
T ss_pred             -------HHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEE
Confidence                   288999999999888 789999999999999999999999885

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=4.1e-46  Score=346.46  Aligned_cols=312  Identities=26%  Similarity=0.356  Sum_probs=271.8

Q ss_pred             CEEEEEcCCCC------CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecC
Q 019790            1 MKAIVITQPGS------PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK   74 (335)
Q Consensus         1 mka~~~~~~~~------~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~   74 (335)
                      |||+++..+|.      ++.+++++.+.|.|+++||+|||.+++||++|++.+.|..+.  .+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~   78 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE   78 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence            99999998875      478999999999999999999999999999999999887543  3589999999999999999


Q ss_pred             CCCCCCCCCEEEEecC------------------------------------------------CcceeeEEEecCCceE
Q 019790           75 NVSRWKVGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVL  106 (335)
Q Consensus        75 ~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~  106 (335)
                      ++++|++||+|+....                                                .|+|++|+.+++..++
T Consensus        79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            9999999999986310                                                2689999999999999


Q ss_pred             eCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChh
Q 019790          107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE  185 (335)
Q Consensus       107 ~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~  185 (335)
                      ++|+++++++++.++++..|||+++.+..++++|++|||          +| .|++|++++|+|+.+|+ +|++++++++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV----------~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~  227 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAV----------VG-LGGVGLSALLGAVAAGASQVVAVDLNED  227 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCcEEEEcCCHH
Confidence            999999999999999999999999878889999999999          88 69999999999999999 6999999999


Q ss_pred             hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHh
Q 019790          186 KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLF  263 (335)
Q Consensus       186 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~  263 (335)
                      +++.++++|++.++++.+.++.+.+++.+++ ++|++|||+|+ ..+..+++.++++|+++.+|.... ....++...++
T Consensus       228 r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~  306 (371)
T cd08281         228 KLALARELGATATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV  306 (371)
T ss_pred             HHHHHHHcCCceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHh
Confidence            9999999999999998888888888888876 89999999987 457888999999999999997643 23456777788


Q ss_pred             hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      .+++++.+++......       ++.++.+++++.+|++++  +++++|+|+|+++||+.+++++..+|+|+
T Consensus       307 ~~~~~i~g~~~~~~~~-------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         307 AEERTLKGSYMGSCVP-------RRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             hcCCEEEEEecCCCCh-------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            8999999987654321       112344789999999864  67899999999999999999988877653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=7e-46  Score=338.90  Aligned_cols=318  Identities=27%  Similarity=0.389  Sum_probs=272.1

Q ss_pred             CEEEEEcCCCCC---cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSP---EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~---~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..+++|   +.+++.+.|.|.|.++||+||+.++++|++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            999999998876   57899999999999999999999999999999999887654445689999999999999999998


Q ss_pred             C-CCCCCEEEEecC-CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           78 R-WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        78 ~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      + |++||+|+++.. +|+|++|+.++.+.++++|++++++++++++..+.|||.++ ....+ +++.++|.         
T Consensus        81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~---------  149 (324)
T cd08291          81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVH---------  149 (324)
T ss_pred             ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEE---------
Confidence            6 999999998754 39999999999999999999999999998888999998654 55555 45556550         


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      ++|+|++|++++|+|+.+|++|+++++++++.+.++++|++.++++...++.+.+++.+.++++|++|||+|+......+
T Consensus       150 ~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~  229 (324)
T cd08291         150 TAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQIL  229 (324)
T ss_pred             ccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHH
Confidence            47899999999999999999999999999999999999999999998888888899988888899999999998888889


Q ss_pred             ccccCCCEEEEEeccCCCcc-ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790          236 GSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE  314 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~  314 (335)
                      .+++++|+++.+|....... .++...++.+++++.++....+.....    .+.++.+.+++. +.+++.+.++|+|+|
T Consensus       230 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~i~~~~~l~~  304 (324)
T cd08291         230 LAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLG----PEVVKKLKKLVK-TELKTTFASRYPLAL  304 (324)
T ss_pred             HhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccC----HHHHHHHHHHHh-CccccceeeEEcHHH
Confidence            99999999999987654322 255666778899999887655432111    223455778887 889999999999999


Q ss_pred             HHHHHHHHHhCCCceeEEEe
Q 019790          315 AAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       315 ~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +++|++.+.+++..||++++
T Consensus       305 ~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         305 TLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHHHHHHHhCCCCCeEEeC
Confidence            99999999999999999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-46  Score=322.75  Aligned_cols=308  Identities=23%  Similarity=0.336  Sum_probs=264.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCC--CCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |+|+++..+++   +++++.|.|++ .|+||+|++.++|||++|.|.+........  +.|.++|||.+|+|.++|+.|+
T Consensus         5 ~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    5 NLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            78999998887   89999999988 999999999999999999999987654432  4599999999999999999999


Q ss_pred             CCCCCCEEEE------------------------ec----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHH
Q 019790           78 RWKVGDQVCA------------------------LL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS  129 (335)
Q Consensus        78 ~~~~Gd~V~~------------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~  129 (335)
                      ++++||||..                        ++    .+|++++|++.+++.|++||++++++++| +..+++.+||
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~H  160 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVH  160 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhh
Confidence            9999999952                        11    35999999999999999999999999999 6667999999


Q ss_pred             HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc---
Q 019790          130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---  205 (335)
Q Consensus       130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---  205 (335)
                      |. +++++++|+++||          +| +|++|+.+...||++|+ +|++++..+.|++.++++|++.+.+....+   
T Consensus       161 Ac-r~~~vk~Gs~vLV----------~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~  228 (354)
T KOG0024|consen  161 AC-RRAGVKKGSKVLV----------LG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQ  228 (354)
T ss_pred             hh-hhcCcccCCeEEE----------EC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHH
Confidence            99 7899999999999          98 79999999999999999 899999999999999999999887665533   


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          206 -FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                       +.+.+++..+...+|+.|||+|... ++.++..++.+|.+++.|. .....+++......+++++.|++.+....    
T Consensus       229 ~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~-g~~~~~fpi~~v~~kE~~~~g~fry~~~~----  303 (354)
T KOG0024|consen  229 ELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGM-GAEEIQFPIIDVALKEVDLRGSFRYCNGD----  303 (354)
T ss_pred             HHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEecc-CCCccccChhhhhhheeeeeeeeeecccc----
Confidence             4455666667677999999999876 6788999999999777764 44557889999999999999998765422    


Q ss_pred             HHHHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  335 (335)
                            ++.+++++++|++  ++++++.|+++++.+||+.+.+++. .-|+++.+
T Consensus       304 ------y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~  352 (354)
T KOG0024|consen  304 ------YPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG  352 (354)
T ss_pred             ------HHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence                  2338999999994  5689999999999999999988774 23777753

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=9.4e-46  Score=321.41  Aligned_cols=309  Identities=26%  Similarity=0.384  Sum_probs=273.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      +||.+..++++|  |++++.+.++|++|||+||+.++|+|++|.+..+|..|..  +|.++|||.+|+|++||++|+.++
T Consensus         3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~vk   78 (366)
T COG1062           3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTSVK   78 (366)
T ss_pred             ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccccC
Confidence            578999999988  9999999999999999999999999999999999988765  899999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|+...                                                .-++|++|.++++.+++++++..
T Consensus        79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            999996321                                                01379999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      +++.++.+.|...|.+.+..+.+++++|+++.|          .| .|++|++++|-|+..|+ ++++++.+++++++++
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV----------~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~  227 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAV----------FG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK  227 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEE----------Ee-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence            999999999999999999989999999999999          87 89999999999999999 8999999999999999


Q ss_pred             HcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceE
Q 019790          192 DLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT  268 (335)
Q Consensus       192 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~  268 (335)
                      ++|+.+++|.++. +..+.+.+.|++ +.|.+|||+|+. .+.+++.++.++|+.+.+|..... ..+++..++... .+
T Consensus       228 ~fGAT~~vn~~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~  305 (366)
T COG1062         228 KFGATHFVNPKEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RV  305 (366)
T ss_pred             hcCCceeecchhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ce
Confidence            9999999999887 588999999987 899999999985 578899999999999999987754 355677776655 88


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +.|+.+.......       .+..+.+|..+|++.  .++++.++|+|+++||++|.+++.+ |-||.
T Consensus       306 ~~Gs~~G~~~p~~-------diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         306 WKGSAFGGARPRS-------DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             EEEEeecCCcccc-------chhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            9999987653221       123388999999854  5889999999999999999999987 55554

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=5.4e-45  Score=335.10  Aligned_cols=306  Identities=27%  Similarity=0.393  Sum_probs=262.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++   .+++++.+.|.+.++||+||+.++++|++|++.+.+....+...|.++|||++|+|+++|+++++|+
T Consensus         1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   77 (339)
T cd08239           1 MRGAVFPGDR---TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR   77 (339)
T ss_pred             CeEEEEecCC---ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence            9999998654   4999999999999999999999999999999988776433233578999999999999999999999


Q ss_pred             CCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+...                            .+|+|++|+.++.+.++++|+++++++++++++++.|||+++ 
T Consensus        78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-  156 (339)
T cd08239          78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-  156 (339)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-
Confidence            999998642                            258999999999999999999999999999999999999999 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      ...++.+|+++||          +| .|++|++++|+|+.+|++ |+++++++++.+.++++|++.++++++.+ .+.+.
T Consensus       157 ~~~~~~~g~~vlV----------~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~  224 (339)
T cd08239         157 RRVGVSGRDTVLV----------VG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIR  224 (339)
T ss_pred             HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHH
Confidence            5577899999999          97 599999999999999998 99999999999999999999999887766 67777


Q ss_pred             HHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccC-hhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790          212 EETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELN-ITSLFAKRLTVQAAGLRSRSTENKALIVSEV  289 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (335)
                      +.+++.++|++|||+|+.. +..++++++++|+++.+|.....  .++ ...++.+++++.+++.....          .
T Consensus       225 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~----------~  292 (339)
T cd08239         225 ELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFSVP----------D  292 (339)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCCHH----------H
Confidence            8887778999999999875 47789999999999999875432  233 34567789999988664321          2


Q ss_pred             HHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          290 EKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       290 ~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++.+++++.+|.+++  +++++|+++|+++|++.+++++ .||+|+.+
T Consensus       293 ~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         293 MEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence            344889999998764  6789999999999999998875 58999874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=8.8e-45  Score=336.01  Aligned_cols=311  Identities=21%  Similarity=0.321  Sum_probs=269.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|+|.++||+|||.++++|++|++.+.|..+.  .+|.++|||++|+|+++|+++++|+
T Consensus         2 mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~   77 (358)
T TIGR03451         2 VRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVA   77 (358)
T ss_pred             cEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccC
Confidence            999999999876  899999999999999999999999999999999886532  3688999999999999999999999


Q ss_pred             CCCEEEEec----------------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccC
Q 019790           81 VGDQVCALL----------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF  120 (335)
Q Consensus        81 ~Gd~V~~~~----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~  120 (335)
                      +||+|+...                                        .+|+|+||+.++.+.++++|+++++++++.+
T Consensus        78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l  157 (358)
T TIGR03451        78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL  157 (358)
T ss_pred             CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence            999997521                                        2488999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEE
Q 019790          121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      ++++.++|+++.+..++++|++|||          +| .|++|++++|+|+.+|+ +|+++++++++++.++++|++.++
T Consensus       158 ~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i  226 (358)
T TIGR03451       158 GCGVMAGLGAAVNTGGVKRGDSVAV----------IG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV  226 (358)
T ss_pred             cccchhhHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence            9999999998878888999999999          97 69999999999999999 599999999999999999999999


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeecccc
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSR  277 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  277 (335)
                      ++.+.++.+.+++.+++.++|++|||+|+ ..+..+++.++++|+++.+|..... ..++++..++.+++++.+++....
T Consensus       227 ~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  306 (358)
T TIGR03451       227 NSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDC  306 (358)
T ss_pred             cCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCC
Confidence            98888888888888888889999999997 4578889999999999999976542 245667677888999998765322


Q ss_pred             chhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          278 STENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ..       +..++.+++++.+|++++  +++++|+++|+++|++.+++++.. |+++.
T Consensus       307 ~~-------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       307 LP-------ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             Cc-------HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            11       122445889999999865  578999999999999999888775 76653

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=6.8e-44  Score=325.48  Aligned_cols=323  Identities=23%  Similarity=0.334  Sum_probs=280.6

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..+++| +.+++++.+.|.+.++||+|||.++++|++|++.+.|.++.....|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            899999887765 4689999999999999999999999999999999888765434458899999999999999999999


Q ss_pred             CCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      ++||+|+++...|+|++|+.++...++++|+++++++++.++..+.+||+++ ...++++|+++||          +|++
T Consensus        81 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI----------~g~~  149 (324)
T cd08292          81 QVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQ----------NAAG  149 (324)
T ss_pred             CCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEE----------cccc
Confidence            9999999987579999999999999999999999999999999999999988 5588999999999          9999


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      |.+|++++++|+.+|++++++++++++.+.++++|.+.++++...++.+.+.+.+.++++|++|||+|+......+++++
T Consensus       150 g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~  229 (324)
T cd08292         150 GAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLG  229 (324)
T ss_pred             cHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhc
Confidence            99999999999999999999999999999998899999998888888888999999889999999999987888999999


Q ss_pred             CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHH
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH  319 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~  319 (335)
                      ++|+++.+|........+++...+.+++++.++..........+......++.+++++.+|.+++.+.+.|+++++++|+
T Consensus       230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~  309 (324)
T cd08292         230 EGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAA  309 (324)
T ss_pred             CCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHH
Confidence            99999999875433344565556778999998876543221112233456677899999999987677889999999999


Q ss_pred             HHHHhCCCceeEEEe
Q 019790          320 QLMESSQHIGKIMLV  334 (335)
Q Consensus       320 ~~~~~~~~~gkvvi~  334 (335)
                      +.+.++...+|++++
T Consensus       310 ~~~~~~~~~~kvvv~  324 (324)
T cd08292         310 AASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHHcCCCCceEEeC
Confidence            999988888898874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=9.3e-44  Score=331.59  Aligned_cols=311  Identities=23%  Similarity=0.313  Sum_probs=263.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.+.|.|.++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++|++++.|+
T Consensus        11 mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~   88 (381)
T PLN02740         11 CKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK   88 (381)
T ss_pred             eEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence            899999887754  788999999999999999999999999999999887654445789999999999999999999999


Q ss_pred             CCCEEEEec---------------------------------------------------CCcceeeEEEecCCceEeCC
Q 019790           81 VGDQVCALL---------------------------------------------------GGGGYAEKVAVPAGQVLPVP  109 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------------------------------~~g~~~~~~~~~~~~~~~~p  109 (335)
                      +||+|++..                                                   .+|+|+||+.++.+.++++|
T Consensus        89 vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP  168 (381)
T PLN02740         89 AGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKID  168 (381)
T ss_pred             CCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECC
Confidence            999998632                                                   14899999999999999999


Q ss_pred             CCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHH
Q 019790          110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA  188 (335)
Q Consensus       110 ~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~  188 (335)
                      +++++++++.+++++.|||+++.+..++++|++|||          +| .|++|++++|+|+.+|+ +|+++++++++++
T Consensus       169 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~  237 (381)
T PLN02740        169 PNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAI----------FG-LGAVGLAVAEGARARGASKIIGVDINPEKFE  237 (381)
T ss_pred             CCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence            999999999999999999998878889999999999          98 69999999999999999 6999999999999


Q ss_pred             HHHHcCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCCC-ccccChhHHh
Q 019790          189 VCKDLGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLF  263 (335)
Q Consensus       189 ~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~  263 (335)
                      .++++|++.++++.+.  ++.+.+++.+++ ++|++|||+|+ ..+..++.+++++ |+++.+|..... ...++...+ 
T Consensus       238 ~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-  315 (381)
T PLN02740        238 KGKEMGITDFINPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-  315 (381)
T ss_pred             HHHHcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-
Confidence            9999999998887753  477778888776 89999999997 4578889999886 999999976542 123333333 


Q ss_pred             hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .+++++.|+....+...       ..++.+++++.+|.+++  +++++|+|+|+++|++.+.+++. .|++|.
T Consensus       316 ~~~~~i~g~~~~~~~~~-------~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~  380 (381)
T PLN02740        316 FDGRSITGSVFGDFKGK-------SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH  380 (381)
T ss_pred             hcCCeEEEEecCCCCcH-------HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence            36888988876544321       12344889999998754  67899999999999999988776 498885

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=8.3e-44  Score=300.78  Aligned_cols=313  Identities=24%  Similarity=0.342  Sum_probs=276.8

Q ss_pred             EEEEEcCCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         2 ka~~~~~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |++++...|+| +++++++++.|....++|+||.+|+.|||+|+..+.|.+|.++.+|.+-|.|++|+|+.+|+++.+|+
T Consensus        21 kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk  100 (354)
T KOG0025|consen   21 KALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFK  100 (354)
T ss_pred             ceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccC
Confidence            78999999998 89999999999998888999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEecCC-cceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           81 VGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        81 ~Gd~V~~~~~~-g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      +||.|+....+ |.|++|.+.+++.++++++.++++.||++..+.||||..|.+..++++||+|+.          .|++
T Consensus       101 ~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQ----------Ngan  170 (354)
T KOG0025|consen  101 PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQ----------NGAN  170 (354)
T ss_pred             CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeee----------cCcc
Confidence            99999987643 899999999999999999999999999999999999999999999999999999          9999


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +.+|.+.+|+|+++|++-+.++|+....+++    +++|+++++......-.+..+.........+.|||+|+....+..
T Consensus       171 S~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~ia  250 (354)
T KOG0025|consen  171 SGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIA  250 (354)
T ss_pred             cHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHH
Confidence            9999999999999999999999887666555    469999998543222122222223345789999999999988999


Q ss_pred             ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH-HHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK-ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE  314 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~  314 (335)
                      +.|..+|..+.+|++.....+.+...+++|++++.|+++..+...+. ++...++...+.+|+..|++..+.....+|+|
T Consensus       251 r~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~  330 (354)
T KOG0025|consen  251 RYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLAD  330 (354)
T ss_pred             HHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechh
Confidence            99999999999999998888899999999999999999988755443 44456778889999999999999888999999


Q ss_pred             HHHHHHHHHh
Q 019790          315 AAEAHQLMES  324 (335)
Q Consensus       315 ~~~a~~~~~~  324 (335)
                      -..|++...+
T Consensus       331 ~~tald~~L~  340 (354)
T KOG0025|consen  331 HKTALDAALS  340 (354)
T ss_pred             hhHHHHHHHH
Confidence            9999996533

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.8e-43  Score=327.05  Aligned_cols=306  Identities=24%  Similarity=0.323  Sum_probs=254.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++.+...+....+++.+.+.|.+.++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus        11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~   89 (360)
T PLN02586         11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFK   89 (360)
T ss_pred             hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccC
Confidence            56666665565566899999999999999999999999999999998876542 24689999999999999999999999


Q ss_pred             CCCEEEEe-----c------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790           81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +||+|+..     |                              .+|+|+||++++.+.++++|+++++++++++++.+.
T Consensus        90 vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  169 (360)
T PLN02586         90 EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGI  169 (360)
T ss_pred             CCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchH
Confidence            99999731     1                              158999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHHHHcCCCEEEeCCCc
Q 019790          126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTE  204 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~  204 (335)
                      |+|+++.....+++|++|||          .| .|++|++++|+|+.+|++|++++.+++++ +.++++|++.++++.+.
T Consensus       170 ta~~al~~~~~~~~g~~VlV----------~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~  238 (360)
T PLN02586        170 TVYSPMKYYGMTEPGKHLGV----------AG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP  238 (360)
T ss_pred             HHHHHHHHhcccCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH
Confidence            99999876677789999999          87 69999999999999999998887776654 45578999988876543


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                         +.+++.++  ++|++||++|+. .+..++++++++|+++.+|.... ...++...++.++..+.++.....      
T Consensus       239 ---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~------  306 (360)
T PLN02586        239 ---EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIGGI------  306 (360)
T ss_pred             ---HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcCCH------
Confidence               34555553  599999999974 57889999999999999986543 345677777778888887765432      


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                          ..++.+++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+.+
T Consensus       307 ----~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        307 ----KETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             ----HHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence                1234488999999998766 5899999999999999998889999875

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=4.3e-43  Score=326.48  Aligned_cols=308  Identities=22%  Similarity=0.261  Sum_probs=260.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++  .+++++.+.|.++++||+|||.++|||++|++.+.+..    .+|.++|||++|+|+++|++++.|+
T Consensus        13 mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~   86 (378)
T PLN02827         13 CRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFE   86 (378)
T ss_pred             eEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccC
Confidence            89999886653  48999999999999999999999999999999887742    2478999999999999999999999


Q ss_pred             CCCEEEEecC------------------------------------------------CcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|+....                                                .|+|++|+.++++.++++|+++
T Consensus        87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence            9999987521                                                2789999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++++.+.+++.++|+++....++++|++|||          +| .|++|++++|+|+.+|+ .|+++++++++.+.++
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV----------~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~  235 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVI----------FG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK  235 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            999999999999999988877788999999999          97 69999999999999999 4777888999999999


Q ss_pred             HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCC-CEEEEEeccCCCccccCh-hHHhhcc
Q 019790          192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNI-TSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~  266 (335)
                      ++|++.++++.+  .++.+.+++.+++ ++|++|||+|.. .+..+++.++++ |+++.+|..... ..+.. ..++.++
T Consensus       236 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~  313 (378)
T PLN02827        236 TFGVTDFINPNDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSG  313 (378)
T ss_pred             HcCCcEEEcccccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcC
Confidence            999999988765  3567778888776 899999999985 578899999998 999999976543 23333 3567789


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++.|+....+...       ..++.+++++.+|++++  +++++|+|+|+++|++.+++++. .|+||.+
T Consensus       314 ~~i~g~~~~~~~~~-------~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        314 RTLKGSLFGGWKPK-------SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             ceEEeeecCCCchh-------hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence            99998876543211       12334888999999887  78999999999999999998876 6888864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-43  Score=322.80  Aligned_cols=301  Identities=20%  Similarity=0.271  Sum_probs=249.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhc-CCCCC-CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      ||++++..+++   +++++.+.| +.++||+|||.++|||++|++.+. |..+. ...+|.++|||++|+|+++  ++++
T Consensus         5 ~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          5 TQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            68889886655   899999987 689999999999999999999875 43321 2346899999999999999  7789


Q ss_pred             CCCCCEEEEe--------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790           79 WKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        79 ~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  126 (335)
                      |++||+|+..                                ..+|+|+||++++++.++++|+++++++++ +..++++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~  157 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAV  157 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHH
Confidence            9999999742                                125999999999999999999999988765 6678889


Q ss_pred             HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      ||+++.+ ....++++|+|          +| +|++|++++|+|+.+|+ +|+++++++++++.++++|++.++|+++.+
T Consensus       158 a~~al~~-~~~~~g~~VlV----------~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~  225 (343)
T PRK09880        158 AIHAAHQ-AGDLQGKRVFV----------SG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD  225 (343)
T ss_pred             HHHHHHh-cCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc
Confidence            9999954 45568999999          87 59999999999999999 689999999999999999999999887766


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHH
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL  284 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (335)
                      +.+ +.+. . .++|++|||+|+. .+..+++.++++|+++.+|.... ..++++..++.+++++.++....        
T Consensus       226 ~~~-~~~~-~-g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~--------  293 (343)
T PRK09880        226 LDH-YKAE-K-GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFRFT--------  293 (343)
T ss_pred             HHH-Hhcc-C-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEeecc--------
Confidence            543 2222 2 2699999999984 57889999999999999996543 34677777888999999876431        


Q ss_pred             HHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          285 IVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       285 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                         ..++.+++++.+|++++  +++++|+++|+++|++.+.+++..||+++.|
T Consensus       294 ---~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        294 ---EEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             ---ccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence               12344899999999875  6789999999999999999888789999976

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=8.2e-43  Score=323.80  Aligned_cols=311  Identities=23%  Similarity=0.341  Sum_probs=258.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++..  +++++.|.|+|.++||+|||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 ~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEEEECCCCccCC
Confidence            899998877654  899999999999999999999999999999999887643 34689999999999999999999999


Q ss_pred             CCCEEEEecC------------------------------------------------CcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|+....                                                .|+|+||+.++.+.++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            9999976420                                                2689999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++++.+++++.|||+++.+..++++|++|||          +| .|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV----------~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~  227 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAV----------FG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAK  227 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            999999999999999999878889999999999          97 69999999999999999 7999999999999999


Q ss_pred             HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790          192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  266 (335)
                      ++|++.++++.+  .++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... ....++...++. +
T Consensus       228 ~~Ga~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~  305 (368)
T TIGR02818       228 KLGATDCVNPNDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-G  305 (368)
T ss_pred             HhCCCeEEcccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-c
Confidence            999999988764  3466777787776 89999999997 4578889999886 99999997642 222333444332 3


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ..+.++.......       ...++.+++++.+|.++  +++++.|+|+|+++|++.+++++. .|+++.+
T Consensus       306 ~~~~g~~~~~~~~-------~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       306 RVWRGSAFGGVKG-------RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             ceEEEeeccCCCc-------HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            4566665432211       11234488999999875  567999999999999999988765 6998864

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.8e-42  Score=321.85  Aligned_cols=309  Identities=21%  Similarity=0.281  Sum_probs=261.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|+|.++||+|||.+++||++|++.+.|..+ ...+|.++|||++|+|+++|+++++|+
T Consensus         3 ~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (369)
T cd08301           3 CKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVESVGEGVTDLK   79 (369)
T ss_pred             cEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEEEeCCCCCccc
Confidence            799999877655  89999999999999999999999999999999988764 235689999999999999999999999


Q ss_pred             CCCEEEEec-------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      +||+|+.+.                                                 ..|+|+||+.++...++++|++
T Consensus        80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  159 (369)
T cd08301          80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE  159 (369)
T ss_pred             cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence            999998641                                                 1278999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++++++.+++.+.++|+++....++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++.+.+
T Consensus       160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~  228 (369)
T cd08301         160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAI----------FG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA  228 (369)
T ss_pred             CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            9999999999999999999878889999999999          97 69999999999999999 899999999999999


Q ss_pred             HHcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCC-CEEEEEeccCCC-ccccChhHHhhc
Q 019790          191 KDLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAK  265 (335)
Q Consensus       191 ~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~  265 (335)
                      +++|++.++++..  ..+.+.+++.+++ ++|++|||+|+. .+..++.+++++ |+++.+|..... ..+++...++ +
T Consensus       229 ~~~Ga~~~i~~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~  306 (369)
T cd08301         229 KKFGVTEFVNPKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-N  306 (369)
T ss_pred             HHcCCceEEcccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-c
Confidence            9999998888765  3466777777766 899999999875 467889999996 999999986542 2344444444 6


Q ss_pred             ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ++++.++....+...       ..++.+++++.+|.++.  +++++|+|+|+++|++.+.+++.. |+++
T Consensus       307 ~~~i~g~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         307 GRTLKGTLFGGYKPK-------TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             CCeEEEEecCCCChH-------HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence            899999876544211       12344888888888654  578999999999999999998864 8876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.1e-42  Score=321.20  Aligned_cols=310  Identities=26%  Similarity=0.352  Sum_probs=258.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|.|.++||+|||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         3 ~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~   79 (368)
T cd08300           3 CKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVESVGEGVTSVK   79 (368)
T ss_pred             ceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEEEeCCCCccCC
Confidence            799998877654  899999999999999999999999999999999887643 24689999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|++..                                                ..|+|+||+.++.+.++++|+++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  159 (368)
T cd08300          80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA  159 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence            999998641                                                12589999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++++.+++++.+||+++.+..++++|++|||          +| .|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV----------~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~  228 (368)
T cd08300         160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAV----------FG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAK  228 (368)
T ss_pred             ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence            999999999999999999878889999999999          97 69999999999999999 7999999999999999


Q ss_pred             HcCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790          192 DLGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  266 (335)
                      ++|++.++++.+.  ++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... .....+...+. +.
T Consensus       229 ~lGa~~~i~~~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~  306 (368)
T cd08300         229 KFGATDCVNPKDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TG  306 (368)
T ss_pred             HcCCCEEEcccccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hc
Confidence            9999999987764  477788888876 89999999997 4678889999886 99999997642 22233333333 33


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .++.++....+..       .+.++.+++++.+|++++  +++++|+|+|+++||+.+.+++. .|++++
T Consensus       307 ~~~~g~~~~~~~~-------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         307 RVWKGTAFGGWKS-------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             CeEEEEEecccCc-------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            4566655443321       112344889999999875  57899999999999999988775 588874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.2e-42  Score=322.60  Aligned_cols=305  Identities=24%  Similarity=0.325  Sum_probs=254.5

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+.+...+.+..++..+.+.|.|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~v   84 (375)
T PLN02178          6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKE   84 (375)
T ss_pred             eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCC
Confidence            5666665565566888899999999999999999999999999999886532 235889999999999999999999999


Q ss_pred             CCEEEEe-----c------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790           82 GDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        82 Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  126 (335)
                      ||+|...     |                              .+|+|+||+.++++.++++|+++++++++++++...|
T Consensus        85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t  164 (375)
T PLN02178         85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT  164 (375)
T ss_pred             CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence            9999731     1                              1589999999999999999999999999999999999


Q ss_pred             HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HHHHHHcCCCEEEeCCCc
Q 019790          127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTE  204 (335)
Q Consensus       127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~  204 (335)
                      +|+++..... .++|++++|          .| .|++|++++|+|+.+|++|++++.++++ .+.++++|++.++++.+.
T Consensus       165 a~~al~~~~~~~~~g~~VlV----------~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~  233 (375)
T PLN02178        165 VYSPMKYYGMTKESGKRLGV----------NG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS  233 (375)
T ss_pred             HHHHHHHhCCCCCCCCEEEE----------Ec-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH
Confidence            9999855443 368999999          87 6999999999999999999998876554 677788999998876542


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                         +.+.+.++  ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+++++.|+......     
T Consensus       234 ---~~v~~~~~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~-----  302 (375)
T PLN02178        234 ---QKMKEAVG--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIGGMK-----  302 (375)
T ss_pred             ---HHHHHhhC--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCccCHH-----
Confidence               35555553  699999999986 57889999999999999987643 3456777788899999988664321     


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           .++.+++++.+|++++.+ +.|+|+|+++|++.+.+++..||+|+.+
T Consensus       303 -----~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        303 -----ETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             -----HHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence                 133488999999998876 6799999999999999998889999864

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.5e-42  Score=317.25  Aligned_cols=298  Identities=22%  Similarity=0.284  Sum_probs=251.3

Q ss_pred             EEEEcCCCCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            3 AIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         3 a~~~~~~~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |+.+..+|.+  ..+++++.|.|+|.++||+|||.++|+|++|++.+.|..+.. ..|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~   79 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFA   79 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccC
Confidence            3566677765  569999999999999999999999999999999998876432 3478999999999999999999999


Q ss_pred             CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+..                            ..+|+|++|+.++.+.++++|+++++++++.+++++.|||+++.
T Consensus        80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~  159 (329)
T TIGR02822        80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL  159 (329)
T ss_pred             CCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH
Confidence            99999731                            12589999999999999999999999999999999999999994


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                       ..++++|+++||          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++++++..+..       
T Consensus       160 -~~~~~~g~~VlV----------~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-------  220 (329)
T TIGR02822       160 -RASLPPGGRLGL----------YGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP-------  220 (329)
T ss_pred             -hcCCCCCCEEEE----------EcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC-------
Confidence             578999999999          985 9999999999999999999999999999999999999988753211       


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                         ..++|+++++.+. ..+..++++++++|+++.+|........++...++.+++++.++.....          ..+.
T Consensus       221 ---~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~  287 (329)
T TIGR02822       221 ---PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTR----------ADAR  287 (329)
T ss_pred             ---cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCH----------HHHH
Confidence               1368998987765 4578899999999999999975443335666677788889888754321          1133


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .+++++.+|++++ ++++|+|+|+++|++.+.+++..||+|+.
T Consensus       288 ~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~  329 (329)
T TIGR02822       288 EFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVLV  329 (329)
T ss_pred             HHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence            4788999999874 57899999999999999999999999873

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-42  Score=297.15  Aligned_cols=310  Identities=25%  Similarity=0.340  Sum_probs=268.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      +||.+..+++.|  |.++|.+.++|+.+||+||+.++++|++|...+.|.. ....+|.++|||.+|+|+.+|.+|++|+
T Consensus         8 CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~-~~~~fP~IlGHEaaGIVESvGegV~~vk   84 (375)
T KOG0022|consen    8 CKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD-PEGLFPVILGHEAAGIVESVGEGVTTVK   84 (375)
T ss_pred             EeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC-ccccCceEecccceeEEEEecCCccccC
Confidence            589999999988  9999999999999999999999999999999999987 3456799999999999999999999999


Q ss_pred             CCCEEEEec-------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      +||+|+++.                                                 .-.+|+||.+++...++++++.
T Consensus        85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~  164 (375)
T KOG0022|consen   85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS  164 (375)
T ss_pred             CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence            999997532                                                 0137999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      .+++.++.+.+...|.|.|..+.+++++|+++.|          +| .|++|+++++-||+.|+ +++.++-++++.+.+
T Consensus       165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAV----------fG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a  233 (375)
T KOG0022|consen  165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAV----------FG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKA  233 (375)
T ss_pred             CChhheeEeeccccccchhhhhhcccCCCCEEEE----------Ee-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHH
Confidence            9999999999999999999999999999999999          88 89999999999999999 999999999999999


Q ss_pred             HHcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCC-CEEEEEeccCCC-ccccChhHHhhc
Q 019790          191 KDLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAK  265 (335)
Q Consensus       191 ~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~  265 (335)
                      +++|+...+|..+  ....+.+.+.|++ ++|+-|+|+|+.. +.+++.+...+ |+-+.+|..... ..++.+.+++ +
T Consensus       234 k~fGaTe~iNp~d~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~  311 (375)
T KOG0022|consen  234 KEFGATEFINPKDLKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-T  311 (375)
T ss_pred             HhcCcceecChhhccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-c
Confidence            9999999998874  3478889999985 8999999999954 67888888877 999999987754 3455666555 5


Q ss_pred             ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +-++.|+.+..+.....-       ..+.+...+++  +..++++.+||+++++||++|.+++.+ |.|+.
T Consensus       312 GR~~~Gs~FGG~K~~~~i-------P~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  312 GRTWKGSAFGGFKSKSDI-------PKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             ccEEEEEecccccchhhh-------hHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence            778888888876543322       22444444555  567899999999999999999999887 76664

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-41  Score=313.06  Aligned_cols=314  Identities=20%  Similarity=0.239  Sum_probs=257.6

Q ss_pred             EEEEEcC-C---CCCcceEEEee---cCC-CCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCC--ceEEEEEE
Q 019790            2 KAIVITQ-P---GSPEVLQLQEV---EDP-QIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL--ECSGTILS   71 (335)
Q Consensus         2 ka~~~~~-~---~~~~~l~~~~~---~~~-~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~~   71 (335)
                      |+|++.+ +   ..+++|++++.   +.| ++.+|||+|||.++++|+.|+..+.+... ....|+++|+  |++|+|..
T Consensus        10 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~~   88 (348)
T PLN03154         10 KQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSKV   88 (348)
T ss_pred             eEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEEE
Confidence            5666632 2   12477898885   454 45799999999999999999875433222 1234789998  88999999


Q ss_pred             ecCCCCCCCCCCEEEEecCCcceeeEEEecCCc--eE--eCCCCCChh-hhccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019790           72 VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VL--PVPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVD  146 (335)
Q Consensus        72 vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~--~~p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~  146 (335)
                      +|++++.|++||+|+++   |+|++|..++.+.  ++  ++|++++++ ++++++++++|||+++....++++|++||| 
T Consensus        89 vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV-  164 (348)
T PLN03154         89 VDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFV-  164 (348)
T ss_pred             EecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEE-
Confidence            99999999999999987   7899999998753  54  458999986 688899999999999988889999999999 


Q ss_pred             eccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEe
Q 019790          147 FCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILD  224 (335)
Q Consensus       147 ~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid  224 (335)
                               +|++|++|++++|+|+.+|++|+++++++++.+.++ ++|++.++++.+ .++.+.+++.++ .++|++||
T Consensus       165 ---------~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d  234 (348)
T PLN03154        165 ---------SAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFD  234 (348)
T ss_pred             ---------ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEE
Confidence                     998899999999999999999999999999999987 799999999875 367777777765 58999999


Q ss_pred             CCChhhHHHhhccccCCCEEEEEeccCCCcc-----ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHC
Q 019790          225 CMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV  299 (335)
Q Consensus       225 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (335)
                      |+|+..+..++++++++|+++.+|...+...     ..+...++.+++++.|+....+..     ...+.++.+++++.+
T Consensus       235 ~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~-----~~~~~~~~~~~l~~~  309 (348)
T PLN03154        235 NVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH-----LFPQFLENVSRYYKQ  309 (348)
T ss_pred             CCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHH-----HHHHHHHHHHHHHHC
Confidence            9999888899999999999999987653321     124556778899999886543211     122345669999999


Q ss_pred             CccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       300 g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      |++++.+..+|+|+++++|++.+++++..||+|+++
T Consensus       310 G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        310 GKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             CCccCceecccCHHHHHHHHHHHHcCCCCceEEEEe
Confidence            999988888999999999999999999999999874

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=1e-41  Score=316.26  Aligned_cols=309  Identities=25%  Similarity=0.335  Sum_probs=259.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++...+.+  +++++.|.|.+.++||+|||.++++|++|++.+.|..+  ..+|.++|||++|+|+++|+++++|+
T Consensus         3 ~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           3 CKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             cEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCC
Confidence            689988876654  89999999999999999999999999999999988654  34688999999999999999999999


Q ss_pred             CCCEEEEec-----------------------------------------------CCcceeeEEEecCCceEeCCCCCC
Q 019790           81 VGDQVCALL-----------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS  113 (335)
Q Consensus        81 ~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~  113 (335)
                      +||+|++..                                               ..|+|++|+.++.+.++++|++++
T Consensus        79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            999998741                                               137899999999999999999999


Q ss_pred             hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH
Q 019790          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD  192 (335)
Q Consensus       114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~  192 (335)
                      +++++.+++++.|||+++.+..++++|+++||          +| .|++|++++++|+++|+ +|+++++++++++.+++
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV----------~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~  227 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAV----------FG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE  227 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999878889999999999          96 69999999999999999 79999999999999999


Q ss_pred             cCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCCCccccChhHHhhcceE
Q 019790          193 LGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLT  268 (335)
Q Consensus       193 ~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~  268 (335)
                      +|++.+++....  .+.+.+++.++ .++|++|||+|+ ..+..++++++++ |+++.+|...+...++++..+.. +++
T Consensus       228 ~ga~~~i~~~~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~  305 (365)
T cd08277         228 FGATDFINPKDSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRT  305 (365)
T ss_pred             cCCCcEeccccccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCE
Confidence            999988887653  35667777777 589999999996 4567889999885 99999997653333455555553 788


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +.++....+...       ..++.+++++.++.++  +++++.|+++|+++|++.+.+++. .|+++.
T Consensus       306 i~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~  365 (365)
T cd08277         306 WKGSFFGGFKSR-------SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT  365 (365)
T ss_pred             EEeeecCCCChH-------HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence            888776544211       1233488888888644  578899999999999999988774 588763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=6e-42  Score=319.54  Aligned_cols=307  Identities=21%  Similarity=0.331  Sum_probs=244.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-------CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEec
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIK-------DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG   73 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~-------~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG   73 (335)
                      |||+++..+++   +++++.|.|.|+       +|||+|||.++|||++|++.+.|..+.  .+|.++|||++|+|+++|
T Consensus         3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG   77 (393)
T TIGR02819         3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKG   77 (393)
T ss_pred             ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEc
Confidence            99999987764   899999999874       689999999999999999999886532  358999999999999999


Q ss_pred             CCCCCCCCCCEEEEec-------------------------------------CCcceeeEEEecCC--ceEeCCCCCCh
Q 019790           74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL  114 (335)
Q Consensus        74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (335)
                      +++++|++||||....                                     .+|+|+||+.++..  .++++|++++.
T Consensus        78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~  157 (393)
T TIGR02819        78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA  157 (393)
T ss_pred             CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence            9999999999996520                                     14899999999964  69999998653


Q ss_pred             ----hhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEE-EEecChhhHHH
Q 019790          115 ----KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF-VTAGSEEKLAV  189 (335)
Q Consensus       115 ----~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~-~~~~~~~~~~~  189 (335)
                          .+++++.+++.++|+++ ...+++++++|||          .| +|++|++++|+|+.+|++++ ++++++++++.
T Consensus       158 ~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV----------~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~  225 (393)
T TIGR02819       158 LEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYI----------AG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQ  225 (393)
T ss_pred             cccccceeeeccHHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHH
Confidence                35677888999999998 4578999999999          76 69999999999999999754 45667889999


Q ss_pred             HHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh---------------hHHHhhccccCCCEEEEEeccCC-C
Q 019790          190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQGG-A  253 (335)
Q Consensus       190 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~~-~  253 (335)
                      ++++|++.+.+....++.+.+.+.+++.++|++|||+|..               .+.++++.++++|+++.+|.... .
T Consensus       226 a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~  305 (393)
T TIGR02819       226 ARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTED  305 (393)
T ss_pred             HHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcc
Confidence            9999997533333456777788888878899999999974               58889999999999999998632 1


Q ss_pred             c-----------cccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccc-cccchhhHHHHH
Q 019790          254 K-----------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIY-KYLPLCEAAEAH  319 (335)
Q Consensus       254 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~-~~~~l~~~~~a~  319 (335)
                      .           .++....++.+++++.+.....  .        .....+++++.+|++++  +++ ++|+|+|+++||
T Consensus       306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~--~--------~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~  375 (393)
T TIGR02819       306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV--M--------KYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGY  375 (393)
T ss_pred             cccccccccccccccchHHhhccCceEEeccCCh--h--------hhHHHHHHHHHcCCCCHHHceecceecHHHHHHHH
Confidence            1           1223344455666666532110  0        11123889999999764  455 789999999999


Q ss_pred             HHHHhCCCceeEEEeC
Q 019790          320 QLMESSQHIGKIMLVP  335 (335)
Q Consensus       320 ~~~~~~~~~gkvvi~~  335 (335)
                      +.+.+++. +|++++|
T Consensus       376 ~~~~~~~~-~Kvvi~~  390 (393)
T TIGR02819       376 AEFDAGAA-KKFVIDP  390 (393)
T ss_pred             HHHhhCCc-eEEEEeC
Confidence            99988754 7999875

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=314.19  Aligned_cols=310  Identities=23%  Similarity=0.283  Sum_probs=254.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.   +++++.+.|+| .++||+|||.++++|++|++.+.+...  ..+|.++|||++|+|+++|+++++|
T Consensus         1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~   75 (347)
T PRK10309          1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDL   75 (347)
T ss_pred             CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCC
Confidence            99999997664   89999999987 589999999999999999975432111  1247899999999999999999999


Q ss_pred             CCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      ++||+|+++.                           .+|+|++|+.++.+.++++|+++++++++.+. +.+++++++ 
T Consensus        76 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~-  153 (347)
T PRK10309         76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF-  153 (347)
T ss_pred             CCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-
Confidence            9999998752                           25899999999999999999999999998664 566688876 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      ....+++++++||          +| +|++|++++|+|+.+|++ |+++++++++++.++++|++.+++++... .+.+.
T Consensus       154 ~~~~~~~g~~vlV----------~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~  221 (347)
T PRK10309        154 HLAQGCEGKNVII----------IG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQ  221 (347)
T ss_pred             HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHH
Confidence            6678899999999          96 699999999999999996 78888899999999999999998877655 55677


Q ss_pred             HHhCCCccc-EEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccC---hhHHhhcceEEEEeeccccchhhHHHHH
Q 019790          212 EETGGKGVD-VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIV  286 (335)
Q Consensus       212 ~~~~~~~~d-~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (335)
                      +.+.+.++| ++|||+|+. .+..+++.++++|+++.+|..... .+++   ...++.+++++.+++........     
T Consensus       222 ~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-----  295 (347)
T PRK10309        222 SVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LHLTSATFGKILRKELTVIGSWMNYSSPWP-----  295 (347)
T ss_pred             HHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cccChhhhhHHhhcCcEEEEEeccccCCcc-----
Confidence            777777898 999999975 578899999999999999976543 2232   23567789999997664221110     


Q ss_pred             HHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          287 SEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       287 ~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+.++.+++++.+|.++  +++++.|+|+|+++|++.+.+++..||+|+++
T Consensus       296 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        296 GQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             hhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence            11234488899999874  67899999999999999999988889999875

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.7e-41  Score=313.27  Aligned_cols=307  Identities=31%  Similarity=0.448  Sum_probs=262.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC-CC---------CCCCCCCCCCceEEEEE
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PP---------PKGASPYPGLECSGTIL   70 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~-~~---------~~~~p~~~G~e~~G~V~   70 (335)
                      |||+++..++.   +++++.+.|++.++||+||+.++++|++|++.+.+.. ..         ...+|.++|||++|+|+
T Consensus         1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~   77 (351)
T cd08233           1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV   77 (351)
T ss_pred             CceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence            99999987653   8999999999999999999999999999998765421 11         11258899999999999


Q ss_pred             EecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcc
Q 019790           71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (335)
Q Consensus        71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~  122 (335)
                      ++|++++.|++||+|++..                            ..|+|++|+.++...++++|+++++++++.+ .
T Consensus        78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~  156 (351)
T cd08233          78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E  156 (351)
T ss_pred             EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence            9999999999999998621                            1589999999999999999999999998765 6


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 019790          123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  201 (335)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~  201 (335)
                      +..+||+++ ...+++++++++|          +| .|.+|.+++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus       157 ~~~ta~~~l-~~~~~~~g~~vlI----------~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~  224 (351)
T cd08233         157 PLAVAWHAV-RRSGFKPGDTALV----------LG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP  224 (351)
T ss_pred             HHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence            788999999 7788999999999          97 59999999999999999 89999999999999999999999999


Q ss_pred             CCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh
Q 019790          202 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE  280 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (335)
                      ++.++.+.+++.++++++|++|||+|+ ..+..++++++++|+++.+|... ...+++...+..+++++.+......   
T Consensus       225 ~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---  300 (351)
T cd08233         225 TEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYTR---  300 (351)
T ss_pred             CccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccCc---
Confidence            888888889888888789999999985 56788999999999999999765 3356777778889999998765421   


Q ss_pred             hHHHHHHHHHHHHHHHHHCCccc--cccccccchhhH-HHHHHHHHhCCCc-eeEEEe
Q 019790          281 NKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEA-AEAHQLMESSQHI-GKIMLV  334 (335)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvi~  334 (335)
                             ..++++++++.+|.++  +.+.++|+++|+ ++|++.+.+++.. +|+||.
T Consensus       301 -------~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         301 -------EDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             -------chHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence                   1234489999999985  457889999996 7999999998874 899873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-41  Score=315.11  Aligned_cols=304  Identities=21%  Similarity=0.281  Sum_probs=256.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |+|+++..++++  +++++.+.|++.++||+|||.++++|++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus        10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv~vG~~v~~~~   86 (357)
T PLN02514         10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_pred             EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEEEECCCccccc
Confidence            578888888865  899999999999999999999999999999998886533 23588999999999999999999999


Q ss_pred             CCCEEEEe-----c------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790           81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +||+|+..     |                              .+|+|++|+.++.+.++++|++++++++++++++++
T Consensus        87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  166 (357)
T PLN02514         87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV  166 (357)
T ss_pred             CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence            99999731     1                              248999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCEEEeCCCc
Q 019790          126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTE  204 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~  204 (335)
                      |||+++......++|++++|          +| .|++|++++|+|+.+|++|++++++++++..+ +++|++.++++.+.
T Consensus       167 ta~~al~~~~~~~~g~~vlV----------~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~  235 (357)
T PLN02514        167 TVYSPLSHFGLKQSGLRGGI----------LG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA  235 (357)
T ss_pred             HHHHHHHHcccCCCCCeEEE----------Ec-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence            99999976666789999999          95 79999999999999999999998887776555 56999887765442


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                         ..+.+.+.  ++|++|||+|. ..+..++++++++|+++.+|.... ..+++...++.+++++.+++.....     
T Consensus       236 ---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~-----  304 (357)
T PLN02514        236 ---AEMQEAAD--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSMK-----  304 (357)
T ss_pred             ---HHHHHhcC--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCHH-----
Confidence               33445443  69999999996 457889999999999999997643 2456677788899999998765421     


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           .++.+++++.+|++.+.+ ++|+|+|+++|++.+.+++..||+|+.+
T Consensus       305 -----~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        305 -----ETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             -----HHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence                 133488999999998776 5899999999999999999889999875

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.6e-41  Score=311.95  Aligned_cols=314  Identities=25%  Similarity=0.269  Sum_probs=258.3

Q ss_pred             EEEEEcCCCCCcceEEEeecC----CCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCce--EEEEEEecCC
Q 019790            2 KAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC--SGTILSVGKN   75 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~----~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~   75 (335)
                      |++....+. ++.|++++.+.    |+|++|||||||.+++||+.|++...|........|+++|++.  .|.+..+|++
T Consensus         9 ~~~~~~~~~-~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~   87 (338)
T cd08295           9 KAYVTGFPK-ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG   87 (338)
T ss_pred             ecCCCCCCC-ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence            455533333 57799999987    8899999999999999999999998885432224578899755  4555567888


Q ss_pred             CCCCCCCCEEEEecCCcceeeEEEecC-CceEeCC-CCCChh-hhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccc
Q 019790           76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVP-SGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY  152 (335)
Q Consensus        76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~  152 (335)
                      ++.|++||+|+++   |+|+||++++. ..++++| ++++++ ++++++++++|||+++.+..++++|++|||       
T Consensus        88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI-------  157 (338)
T cd08295          88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFV-------  157 (338)
T ss_pred             CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEE-------
Confidence            8899999999987   78999999999 7999995 568876 788999999999999988889999999999       


Q ss_pred             cccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       153 ~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                         +|++|++|++++|+|+.+|++|+++++++++.+.+++ +|++.++++.+ .++.+.+++.++ .++|++||++|+..
T Consensus       158 ---~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~  233 (338)
T cd08295         158 ---SAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKM  233 (338)
T ss_pred             ---ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHH
Confidence               9999999999999999999999999999999999998 99999998764 477777777775 68999999999988


Q ss_pred             HHHhhccccCCCEEEEEeccCCCcc-----ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc
Q 019790          231 FQRNLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV  305 (335)
Q Consensus       231 ~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  305 (335)
                      +..++++++++|+++.+|.......     ..+...+..+++++.++.......     ...+.++.+++++.+|.+++.
T Consensus       234 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~l~~~g~l~~~  308 (338)
T cd08295         234 LDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLH-----RYPEFLEEMSGYIKEGKLKYV  308 (338)
T ss_pred             HHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHH-----HHHHHHHHHHHHHHCCCeEce
Confidence            8999999999999999986543211     123455667788888765543211     123455668899999999987


Q ss_pred             cccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          306 IYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       306 ~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +...|+++++++|++.+++++..||+|++.
T Consensus       309 ~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         309 EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            777799999999999999999899999864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2.7e-41  Score=310.64  Aligned_cols=324  Identities=28%  Similarity=0.356  Sum_probs=275.8

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCC-CcEEEEEEEeecCcchhhhhcCCCCCCCC----CCCCCCCceEEEEEEecC
Q 019790            1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKG----ASPYPGLECSGTILSVGK   74 (335)
Q Consensus         1 mka~~~~~~~~~-~~l~~~~~~~~~~~~-~eVlI~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~   74 (335)
                      |||+++..++.+ +.+.+++.|.|++.+ ++|+||+.++++|++|+..+.|..+....    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            999999988865 468999999998888 99999999999999999998887653322    577999999999999999


Q ss_pred             CCCCCCCCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccc
Q 019790           75 NVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS  153 (335)
Q Consensus        75 ~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~  153 (335)
                      +++.|++||+|++.. ..|+|++|+.++.+.++++|++++++++++++++.+|||+++.....++++++|||        
T Consensus        81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI--------  152 (341)
T cd08290          81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQ--------  152 (341)
T ss_pred             CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEE--------
Confidence            999999999999886 36899999999999999999999999999999999999999987788999999999        


Q ss_pred             ccccccchHHHHHHHHHhhCCCeEEEEecCh----hhHHHHHHcCCCEEEeCCCc---cHHHHHHHHhCCCcccEEEeCC
Q 019790          154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGVDVILDCM  226 (335)
Q Consensus       154 ~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~  226 (335)
                        +|++|++|++++++|+++|++++++++++    ++.+.++++|++.++++...   .+...+...+++ ++|++|||+
T Consensus       153 --~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~  229 (341)
T cd08290         153 --NGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCV  229 (341)
T ss_pred             --ccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECc
Confidence              99899999999999999999999998776    66788888999999887765   677778877776 899999999


Q ss_pred             ChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccccc
Q 019790          227 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI  306 (335)
Q Consensus       227 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  306 (335)
                      |+..+...+++++++|+++.+|........++...++.+++++.+...........+......++.+++++.+|.+.+..
T Consensus       230 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  309 (341)
T cd08290         230 GGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPP  309 (341)
T ss_pred             CcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCc
Confidence            99888888999999999999986544334456656678899999887654321011123344566688999999988876


Q ss_pred             cccc---chhhHHHHHHHHHhCCCceeEEEeC
Q 019790          307 YKYL---PLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       307 ~~~~---~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ...+   +++++++|++.+.+++..||+|+.|
T Consensus       310 ~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         310 VEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             ccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            6677   9999999999999999899999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-41  Score=306.01  Aligned_cols=324  Identities=43%  Similarity=0.735  Sum_probs=280.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+..+++++.+.|++.++||+|||.++++|+.|+....|..+.....|.++|+|++|+|+++|++++.++
T Consensus         2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   81 (334)
T PTZ00354          2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK   81 (334)
T ss_pred             cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence            89999999888777888888888899999999999999999999998887655445577999999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++..+|+|++|++++.+.++++|++++..+++.++.++.+||+++.....+.++++++|          +|++|
T Consensus        82 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI----------~ga~g  151 (334)
T PTZ00354         82 EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLI----------HAGAS  151 (334)
T ss_pred             CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------EcCCc
Confidence            99999998667999999999999999999999999999999999999999988889999999999          99899


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      .+|++++++|+.+|++++++++++++.+.++++|.+.+++....+ +...+.+.++++++|++|||+++..+..++++++
T Consensus       152 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~  231 (334)
T PTZ00354        152 GVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLA  231 (334)
T ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhc
Confidence            999999999999999988899999999999999998888876655 7778888888788999999999888888999999


Q ss_pred             CCCEEEEEeccCCCccc-cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHH
Q 019790          240 IDGRLFIIGTQGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA  318 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a  318 (335)
                      ++|+++.+|...+.... ++...++.++.++.++.................++.+++++.++.+.+.+.+.+++++++++
T Consensus       232 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  311 (334)
T PTZ00354        232 VDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEA  311 (334)
T ss_pred             cCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHH
Confidence            99999999865443322 66666667777888876654332222234445666688899999988878889999999999


Q ss_pred             HHHHHhCCCceeEEEe
Q 019790          319 HQLMESSQHIGKIMLV  334 (335)
Q Consensus       319 ~~~~~~~~~~gkvvi~  334 (335)
                      ++.+.+++..+|+|+.
T Consensus       312 ~~~~~~~~~~~kvvv~  327 (334)
T PTZ00354        312 HTFLEQNKNIGKVVLT  327 (334)
T ss_pred             HHHHHhCCCCceEEEe
Confidence            9999988888899885

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=1.3e-40  Score=303.70  Aligned_cols=320  Identities=33%  Similarity=0.489  Sum_probs=277.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++.+++.+..+++.+.+.|.+.+++|+|++.++++|++|++...|..+.  ....|.++|+|++|+|+++|++++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            89999998887777888888888889999999999999999999988876533  2345788999999999999999999


Q ss_pred             CCCCCEEEEecC--CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccc
Q 019790           79 WKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH  156 (335)
Q Consensus        79 ~~~Gd~V~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~  156 (335)
                      +++||+|+++..  .|+|++|+.++.+.++++|+++++++++++++.+++|| ++....+++++++++|          +
T Consensus        81 ~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI----------~  149 (324)
T cd08244          81 AWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLV----------T  149 (324)
T ss_pred             CCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEE----------E
Confidence            999999999852  58999999999999999999999999999999999995 5557788999999999          9


Q ss_pred             cccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhc
Q 019790          157 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG  236 (335)
Q Consensus       157 g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (335)
                      |++|.+|.+++++|+.+|++|+++++++++.+.++++|++.++++.+..+.+.+.+.++++++|+++||+|+.....+++
T Consensus       150 g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~  229 (324)
T cd08244         150 AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALA  229 (324)
T ss_pred             cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHH
Confidence            99999999999999999999999999999999999999988888888788888888888788999999999988888999


Q ss_pred             cccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790          237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA  316 (335)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~  316 (335)
                      +++++|+++.+|........++...++.+++++.+........    ....+.++.+++++.++.+.+.+.+.|++++++
T Consensus       230 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~  305 (324)
T cd08244         230 LLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAER----GGLRALEARALAEAAAGRLVPVVGQTFPLERAA  305 (324)
T ss_pred             HhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCH----HHHHHHHHHHHHHHHCCCccCccceEEeHHHHH
Confidence            9999999999987654433455555678888988877654322    223445666888999999888788899999999


Q ss_pred             HHHHHHHhCCCceeEEEeC
Q 019790          317 EAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       317 ~a~~~~~~~~~~gkvvi~~  335 (335)
                      +|++.+.+++..||++++|
T Consensus       306 ~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         306 EAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999999999999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.7e-41  Score=312.91  Aligned_cols=305  Identities=22%  Similarity=0.365  Sum_probs=256.2

Q ss_pred             EEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCC
Q 019790            4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD   83 (335)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd   83 (335)
                      +++..++++  +++++.|.|.+.++||+|||.++++|++|++.+.+.......+|.++|||++|+|+++|++++.+ +||
T Consensus         2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd   78 (349)
T TIGR03201         2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK   78 (349)
T ss_pred             ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence            456666654  88999999999999999999999999999998754433223458899999999999999999887 999


Q ss_pred             EEEEe----------c-----------------CCcceeeEEEecCCceEeCCC------CCChhhhccCcchHHHHHHH
Q 019790           84 QVCAL----------L-----------------GGGGYAEKVAVPAGQVLPVPS------GVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        84 ~V~~~----------~-----------------~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~~~~~~~~a~~~  130 (335)
                      +|+..          |                 .+|+|++|+.++.+.++++|+      ++++++++++++++.++|++
T Consensus        79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a  158 (349)
T TIGR03201        79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA  158 (349)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence            99762          1                 258999999999999999999      89999999999999999999


Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc---cHH
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---DFV  207 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~  207 (335)
                      +. ..++++|++|+|          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++++.+.   ++.
T Consensus       159 ~~-~~~~~~g~~VlV----------~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~  226 (349)
T TIGR03201       159 AV-QAGLKKGDLVIV----------IGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVK  226 (349)
T ss_pred             HH-hcCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHH
Confidence            85 578899999999          996 999999999999999999999999999999999999998887653   466


Q ss_pred             HHHHHHhCCCccc----EEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH
Q 019790          208 ARVKEETGGKGVD----VILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK  282 (335)
Q Consensus       208 ~~~~~~~~~~~~d----~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
                      +.+++.+++.++|    ++|||+|+.. +..++++++++|+++.+|..... ..++...++.++.++.+.+....     
T Consensus       227 ~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~~~~-----  300 (349)
T TIGR03201       227 KLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWGCPP-----  300 (349)
T ss_pred             HHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEecCCH-----
Confidence            7777888877886    8999999865 56789999999999999976532 35666677777888888764321     


Q ss_pred             HHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          283 ALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       283 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           ..++.+++++.+|++++  ++ +.|+|+|+++||+.+++++..||++++|
T Consensus       301 -----~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       301 -----DRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             -----HHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence                 12334889999999865  44 5789999999999999999889999875

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1e-40  Score=305.16  Aligned_cols=309  Identities=23%  Similarity=0.273  Sum_probs=257.6

Q ss_pred             CEEEEEcC-C-CCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCC
Q 019790            1 MKAIVITQ-P-GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV   76 (335)
Q Consensus         1 mka~~~~~-~-~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~   76 (335)
                      ||||++.. . +++  +.+++++.+.|+|+++||+|||.+++||+.|.+...+  .  ..+|.++|+|++|+|++   .+
T Consensus         3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---CC
Confidence            89999998 3 444  8899999999999999999999999999887652211  1  13478999999999985   44


Q ss_pred             CCCCCCCEEEEecCCcceeeEEEecCC---ceEeCCCCCC-----hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeec
Q 019790           77 SRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVS-----LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFC  148 (335)
Q Consensus        77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~  148 (335)
                      +.|++||+|+++   ++|++|+.++.+   .++++|++++     ...+++++.+++|||+++.+..++++|+++||   
T Consensus        76 ~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI---  149 (329)
T cd08294          76 SKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVV---  149 (329)
T ss_pred             CCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEE---
Confidence            679999999987   579999999999   9999999988     23334688999999999988899999999999   


Q ss_pred             cccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                             +|++|++|++++|+|+.+|++|+++++++++.+.++++|++.++++.+.++.+.+++.++ +++|++||++|+
T Consensus       150 -------~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~  221 (329)
T cd08294         150 -------NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGG  221 (329)
T ss_pred             -------ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCH
Confidence                   999999999999999999999999999999999999999999999988888888888776 689999999999


Q ss_pred             hhHHHhhccccCCCEEEEEeccCCCcc------ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcc
Q 019790          229 SYFQRNLGSLNIDGRLFIIGTQGGAKT------ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV  302 (335)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  302 (335)
                      ..+..++++++++|+++.+|.......      ......+..+++++.++......     ....+.++.+++++.+|.+
T Consensus       222 ~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~l~~~g~i  296 (329)
T cd08294         222 EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ-----DRWPEALKQLLKWIKEGKL  296 (329)
T ss_pred             HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhH-----HHHHHHHHHHHHHHHCCCC
Confidence            888899999999999999985432110      12234456678888876543221     1224456668899999999


Q ss_pred             ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          303 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       303 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++.+..+|+++++++|++.+.+++..||+|++.
T Consensus       297 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         297 KYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             cCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            887767899999999999999999999999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.6e-41  Score=312.46  Aligned_cols=302  Identities=21%  Similarity=0.257  Sum_probs=238.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCC--CCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++...+ ++ +++++.|.|+|.++||+|||.++|||++|++.+.|.++..  ..+|.++|||++|+|+++|++ ++
T Consensus         1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~   77 (355)
T cd08230           1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG   77 (355)
T ss_pred             CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence            8999998543 34 9999999999999999999999999999999999875432  235789999999999999999 99


Q ss_pred             CCCCCEEEEec------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHH
Q 019790           79 WKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW  128 (335)
Q Consensus        79 ~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~  128 (335)
                      |++||+|++..                              .+|+|++|+.++.+.++++|++++ + ++++..+.++++
T Consensus        78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~  155 (355)
T cd08230          78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVE  155 (355)
T ss_pred             CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHH
Confidence            99999998642                              248899999999999999999998 4 444666766665


Q ss_pred             HHHHHh------cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEE
Q 019790          129 STVFMT------SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCI  199 (335)
Q Consensus       129 ~~l~~~------~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~  199 (335)
                      +++...      .+.++|++++|          +| .|++|++++|+|+.+|++|+++++   ++++++.++++|++. +
T Consensus       156 ~a~~~~~~~~~~~~~~~g~~vlI----------~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v  223 (355)
T cd08230         156 KAIEQAEAVQKRLPTWNPRRALV----------LG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-V  223 (355)
T ss_pred             HHHHHHhhhhhhcccCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-e
Confidence            554322      23578999999          97 699999999999999999999987   678899999999987 4


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCC-CccccC----hhHHhhcceEEEEee
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELN----ITSLFAKRLTVQAAG  273 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~----~~~~~~~~~~~~~~~  273 (335)
                      ++.+.++.+ . +.  ..++|++|||+|+. .+..+++.++++|+++.+|.... ...+++    ...++.+++++.|+.
T Consensus       224 ~~~~~~~~~-~-~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~  299 (355)
T cd08230         224 NSSKTPVAE-V-KL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSV  299 (355)
T ss_pred             cCCccchhh-h-hh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEec
Confidence            665555433 2 11  34799999999975 57889999999999999997765 233444    356677999999976


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHCCc------cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          274 LRSRSTENKALIVSEVEKNVWPAIAVGK------VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .....  +        ++.+++++.++.      +++.++++|+++|+++|++.++++.  .|+|+++
T Consensus       300 ~~~~~--~--------~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         300 NANKR--H--------FEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             CCchh--h--------HHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence            54322  1        122556666554      6677899999999999999887544  5999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.2e-40  Score=306.91  Aligned_cols=306  Identities=21%  Similarity=0.252  Sum_probs=244.6

Q ss_pred             CcceEEEeecCCCCC-CCcEEEEEEEeecCcchhhhhcCCC--CCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe
Q 019790           12 PEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL   88 (335)
Q Consensus        12 ~~~l~~~~~~~~~~~-~~eVlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~   88 (335)
                      ++.+++++.+.|.|. ++||+|||.++|||+.|+.......  .....+|.++|||++|+|+++|+++++|++||+|+++
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            578999999999874 9999999999999999864332111  1122357899999999999999999999999999886


Q ss_pred             cCCcceeeEEEecCCceEeCCCCCChhh----hccCcchHHHHHHHHHHhcCCCCC--CEEEEeeccccccccccccchH
Q 019790           89 LGGGGYAEKVAVPAGQVLPVPSGVSLKD----AAAFPEVACTVWSTVFMTSHLSPG--ESFLVDFCSISYSDVHGGSSGI  162 (335)
Q Consensus        89 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~~~~~~~~a~~~l~~~~~~~~~--~~vli~~~~~~~~~~~g~~g~~  162 (335)
                      .  ++|++|++++++.++++|+++++.+    +++++.+++|||+++.+..+++++  ++|||          +|++|++
T Consensus       100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI----------~ga~g~v  167 (345)
T cd08293         100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVV----------SGAAGAC  167 (345)
T ss_pred             C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEE----------ECCCcHH
Confidence            3  6899999999999999999864322    456788999999999888888877  99999          9989999


Q ss_pred             HHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          163 GTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       163 G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      |++++|+|+++|+ +|+++++++++.+.+++ +|++.++++.+.++.+.+++.++ +++|++|||+|+..+..++++|++
T Consensus       168 G~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~  246 (345)
T cd08293         168 GSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNE  246 (345)
T ss_pred             HHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhcc
Confidence            9999999999999 89999999999998876 99999999988888888888876 689999999999888889999999


Q ss_pred             CCEEEEEeccCCCc--c----ccC--hhHH-hhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          241 DGRLFIIGTQGGAK--T----ELN--ITSL-FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       241 ~G~~v~~g~~~~~~--~----~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      +|+++.+|......  .    .+.  ...+ ..++++.........     .....+.++.+.+++.+|.+++.....++
T Consensus       247 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~~~~~~~  321 (345)
T cd08293         247 NSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNY-----KDKFEEAIAQLSQWVKEGKLKVKETVYEG  321 (345)
T ss_pred             CCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeecc-----HhHHHHHHHHHHHHHHCCCccceeEEeec
Confidence            99999998543210  1    111  1111 223444433322211     11223455668899999999887666679


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+.+++..||+|+++
T Consensus       322 l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         322 LENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHHHHHhcCCCCCeEEEEC
Confidence            999999999999998889999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=6.7e-41  Score=315.10  Aligned_cols=311  Identities=24%  Similarity=0.314  Sum_probs=249.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhh-cCCCCC-----CCCCCCCCCCceEEEEEEecC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-----PKGASPYPGLECSGTILSVGK   74 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e~~G~V~~vG~   74 (335)
                      |||+++..++.   +++++.|.|.+.++||+|||.++|||++|++.+ .|....     ...+|.++|||++|+|+++|+
T Consensus         3 ~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           3 TKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             cEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            68888887653   999999999999999999999999999999976 453211     113688999999999999999


Q ss_pred             CCC-CCCCCCEEEEec----------------CCcceeeEEEecCC----ceEeCCCCCChhhhccCcchHH--HHHHHH
Q 019790           75 NVS-RWKVGDQVCALL----------------GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVAC--TVWSTV  131 (335)
Q Consensus        75 ~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~~~~~--~a~~~l  131 (335)
                      +++ +|++||+|+...                .+|+|++|+.++.+    .++++|+++++++++.+....+  +++.++
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~  159 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTAN  159 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhc
Confidence            998 699999998741                25899999999987    6899999999999885422222  233332


Q ss_pred             --------HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC---eEEEEecChhhHHHHHHc-------
Q 019790          132 --------FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDL-------  193 (335)
Q Consensus       132 --------~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~---~V~~~~~~~~~~~~~~~~-------  193 (335)
                              .+..++++|++++|          +|++|++|++++|+|+.+|+   +|+++++++++++.++++       
T Consensus       160 ~~~~~~~~~~~~~~~~g~~VlV----------~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~  229 (410)
T cd08238         160 YHLQPGEYRHRMGIKPGGNTAI----------LGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS  229 (410)
T ss_pred             ccccccchhhhcCCCCCCEEEE----------EeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence                    24567899999999          99899999999999999864   799999999999999886       


Q ss_pred             -CCC-EEEeCCC-ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccC-CC-ccccChhHHhhcce
Q 019790          194 -GAD-VCINYKT-EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GA-KTELNITSLFAKRL  267 (335)
Q Consensus       194 -g~~-~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~  267 (335)
                       |++ .++++.+ .++.+.+++.+++.++|++||++|+ ..+..++++++++|+++.++... .. ..+++...++.+++
T Consensus       230 ~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~  309 (410)
T cd08238         230 RGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNT  309 (410)
T ss_pred             cCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCc
Confidence             665 4666654 5677888888888899999999985 55788999999999988775432 21 24567777888999


Q ss_pred             EEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++.|+.....          ..++++++++.+|++++  +++++|+|+|+++|++.+. ++..||+|+.+
T Consensus       310 ~i~g~~~~~~----------~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~  368 (410)
T cd08238         310 HYVGTSGGNT----------DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT  368 (410)
T ss_pred             EEEEeCCCCH----------HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence            9999764322          12334889999999887  6799999999999999998 67779999865

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.8e-40  Score=307.60  Aligned_cols=309  Identities=28%  Similarity=0.423  Sum_probs=259.5

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC---
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR---   78 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~---   78 (335)
                      ||+++..+++  .+++++.+.|.|.++||+|||.++++|++|++...|..+. ..+|.++|||++|+|+++|++++.   
T Consensus         2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccccc
Confidence            7899998874  4999999999999999999999999999999999887652 346889999999999999999986   


Q ss_pred             ---CCCCCEEEEec----------------------------------CCcceeeEEEecCC-ceEeCCCCCChhhhccC
Q 019790           79 ---WKVGDQVCALL----------------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF  120 (335)
Q Consensus        79 ---~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~  120 (335)
                         |++||+|+.+.                                  ..|+|++|+.++++ .++++|++++..+++++
T Consensus        79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence               99999998762                                  24899999999996 79999999999999988


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEE
Q 019790          121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      ++++.|||+++.+...++++++|||          +| +|.+|++++++|+.+|+ +|+++++++++.+.++++|++.++
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI----------~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi  227 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVV----------QG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI  227 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence            8999999999977777779999999          97 69999999999999999 999999999999999999999888


Q ss_pred             eCCCccH---HHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeec
Q 019790          200 NYKTEDF---VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGL  274 (335)
Q Consensus       200 ~~~~~~~---~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  274 (335)
                      +++...+   ...+++.++++++|++|||+|+ ..+..++++++++|+++.+|..... ..+++...++.+++++.++..
T Consensus       228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (361)
T cd08231         228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN  307 (361)
T ss_pred             cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence            7765443   3567888888899999999986 4578889999999999999876432 234555566888999988865


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHCC----ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          275 RSRSTENKALIVSEVEKNVWPAIAVG----KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .....      +++    +++++.++    .+.++++++|+++|+++||+.+.+++. +|+||.|
T Consensus       308 ~~~~~------~~~----~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~  361 (361)
T cd08231         308 YDPSH------LYR----AVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP  361 (361)
T ss_pred             CCchh------HHH----HHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence            43211      122    55566555    355677899999999999999988775 7999986

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.5e-40  Score=303.89  Aligned_cols=301  Identities=20%  Similarity=0.252  Sum_probs=248.4

Q ss_pred             CCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe
Q 019790            9 PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL   88 (335)
Q Consensus         9 ~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~   88 (335)
                      ...++.+++.+.+.|+|++|||+|||.++++|+.++.   |..+.. ..|.++|.|++|+|+++|+   .|++||+|+++
T Consensus        13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~   85 (325)
T TIGR02825        13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS   85 (325)
T ss_pred             CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence            3346889999999999999999999999999997654   332222 2378999999999999774   59999999987


Q ss_pred             cCCcceeeEEEecCCceEeC----CCCCChhhh-ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHH
Q 019790           89 LGGGGYAEKVAVPAGQVLPV----PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIG  163 (335)
Q Consensus        89 ~~~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G  163 (335)
                         ++|++|+.++.+.+.++    |++++++++ +++++++.|||+++.+..++++|++|||          +|++|++|
T Consensus        86 ---~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI----------~ga~g~vG  152 (325)
T TIGR02825        86 ---PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMV----------NAAAGAVG  152 (325)
T ss_pred             ---cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEE----------eCCccHHH
Confidence               46999999999988877    899999987 6799999999999988899999999999          99999999


Q ss_pred             HHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCC
Q 019790          164 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG  242 (335)
Q Consensus       164 ~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G  242 (335)
                      ++++|+|+.+|++|+++++++++.+.++++|++.++++.+. .+.+.++..+ ++++|++|||+|+..+..++++++++|
T Consensus       153 ~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G  231 (325)
T TIGR02825       153 SVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFG  231 (325)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCc
Confidence            99999999999999999999999999999999999998764 5555555554 458999999999988889999999999


Q ss_pred             EEEEEeccCCCc----cc--cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790          243 RLFIIGTQGGAK----TE--LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA  316 (335)
Q Consensus       243 ~~v~~g~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~  316 (335)
                      +++.+|......    .+  .....++.+++++.++.......    ....+.++.+++++.+|++++.+...|++++++
T Consensus       232 ~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~  307 (325)
T TIGR02825       232 RIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQG----EVRQKALKELLKWVLEGKIQYKEYVIEGFENMP  307 (325)
T ss_pred             EEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhh----hhhHHHHHHHHHHHHCCCcccceeccccHHHHH
Confidence            999998654211    11  12344566788888775533211    112344566899999999998777889999999


Q ss_pred             HHHHHHHhCCCceeEEEe
Q 019790          317 EAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       317 ~a~~~~~~~~~~gkvvi~  334 (335)
                      +|++.+.+++..||+|++
T Consensus       308 ~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       308 AAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HHHHHHhcCCCCCeEEeC
Confidence            999999999999999874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=5e-41  Score=304.46  Aligned_cols=291  Identities=19%  Similarity=0.252  Sum_probs=232.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecC-cchhhhhcCCCCCC--CCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALN-RADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..++   .+++++.+.|+|+++||+|||.+++|| ++|++.+.|..+..  ..+|.++|||++|+|+++|+++ 
T Consensus         2 ~ka~~~~~~~---~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-   77 (308)
T TIGR01202         2 TQAIVLSGPN---QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-   77 (308)
T ss_pred             ceEEEEeCCC---eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence            7899998654   499999999999999999999999996 69999888876432  2569999999999999999998 


Q ss_pred             CCCCCCEEEEec---------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeec
Q 019790           78 RWKVGDQVCALL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFC  148 (335)
Q Consensus        78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~  148 (335)
                      +|++||+|+..+         ..|+|+||+.++++.++++|++++++. +.+ .+.+|||+++.+ . ..++++++|   
T Consensus        78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV---  150 (308)
T TIGR01202        78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLI---  150 (308)
T ss_pred             CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEE---
Confidence            599999998642         159999999999999999999999865 434 457899999854 3 346889999   


Q ss_pred             cccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          149 SISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                             +| +|++|++++|+|+++|++ |+++.+++++++.+...   .++|+.+.          .+.++|++|||+|
T Consensus       151 -------~G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----------~~~g~Dvvid~~G  209 (308)
T TIGR01202       151 -------VG-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD----------PRRDYRAIYDASG  209 (308)
T ss_pred             -------EC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc----------cCCCCCEEEECCC
Confidence                   87 799999999999999997 55556666666655443   33443211          2357999999999


Q ss_pred             hh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--
Q 019790          228 AS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--  304 (335)
Q Consensus       228 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--  304 (335)
                      +. .+..+++.++++|+++.+|..... ..++...++.+++++.++.....          +.++.+++++++|++++  
T Consensus       210 ~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~l~~~g~i~~~~  278 (308)
T TIGR01202       210 DPSLIDTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRIAAEWQP----------GDLHAVRELIESGALSLDG  278 (308)
T ss_pred             CHHHHHHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEEecccch----------hHHHHHHHHHHcCCCChhh
Confidence            85 478899999999999999976432 45666677788888887644321          12445999999999875  


Q ss_pred             ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          305 VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       305 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ++++.|+|+|+++|++.+.++...+|++++
T Consensus       279 ~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       279 LITHQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             ccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            679999999999999998777777899874

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=4e-40  Score=302.06  Aligned_cols=304  Identities=30%  Similarity=0.462  Sum_probs=261.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++..  +++++.+.|++.++||+||+.++++|++|++.+.|..+. ...|.++|||++|+|+++|+++++|+
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGP--LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCC--ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEEEECCCCccCC
Confidence            999999987543  899999999999999999999999999999998886543 23478999999999999999999999


Q ss_pred             CCCEEEE----------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+.                            +...|++++|+.++...++++|+++++++++.+++++++||+++.
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~  157 (333)
T cd08296          78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR  157 (333)
T ss_pred             CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence            9999976                            222588999999999999999999999999999999999999985


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      . .++.+++++||          +| +|.+|.+++++|+++|++|+++++++++++.++++|++.++++...++.+.+++
T Consensus       158 ~-~~~~~~~~vlV----------~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~  225 (333)
T cd08296         158 N-SGAKPGDLVAV----------QG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQE  225 (333)
T ss_pred             h-cCCCCCCEEEE----------EC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHh
Confidence            5 48999999999          98 899999999999999999999999999999999999999998887777776666


Q ss_pred             HhCCCcccEEEeCCC-hhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                      .   +++|+++|++| +..+..++++++++|+++.+|... ...+++...++.+++++.++.....          ..++
T Consensus       226 ~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~  291 (333)
T cd08296         226 L---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGTA----------LDSE  291 (333)
T ss_pred             c---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCCH----------HHHH
Confidence            5   36999999986 466788999999999999999765 3345666677789999998764321          1223


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .+++++.++.+++.+ +.|+++|+++||+.+.+++..||+|++
T Consensus       292 ~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         292 DTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence            367778888888775 689999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=5.9e-40  Score=301.67  Aligned_cols=308  Identities=29%  Similarity=0.440  Sum_probs=264.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++.+  +++.+.+.|.+.+++|+||+.++++|++|+....|.++.  ...+|.++|+|++|+|+++|++++.
T Consensus         1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~   78 (340)
T cd05284           1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG   78 (340)
T ss_pred             CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence            899999987654  888899999999999999999999999999998887652  4456889999999999999999999


Q ss_pred             CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      |++||+|+++.                           .+|+|++|+.++.+.++++|++++++++++++..++|||+++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l  158 (340)
T cd05284          79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV  158 (340)
T ss_pred             CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            99999998763                           258999999999999999999999999999999999999999


Q ss_pred             HHh-cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHH
Q 019790          132 FMT-SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR  209 (335)
Q Consensus       132 ~~~-~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  209 (335)
                      ... ..+.+++++||          +| .+.+|++++++|+.+| ++|+++++++++.+.++++|.+++++++.. +...
T Consensus       159 ~~~~~~~~~~~~vlI----------~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~  226 (340)
T cd05284         159 KKALPYLDPGSTVVV----------IG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEE  226 (340)
T ss_pred             HHhcccCCCCCEEEE----------Ec-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHH
Confidence            766 46889999999          98 5679999999999999 799999999999999999999999888777 8888


Q ss_pred             HHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790          210 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSE  288 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (335)
                      +++.+++.++|+++||+|+ ..+..++++|+++|+++.+|....  ..++....+.+++++.+......          .
T Consensus       227 i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~----------~  294 (340)
T cd05284         227 VRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGTR----------A  294 (340)
T ss_pred             HHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEecccH----------H
Confidence            8888887789999999996 567888999999999999986543  23444444578888887654321          1


Q ss_pred             HHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          289 VEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       289 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .++.+++++.+|.+++ ..+.|+++++++|++.+++++..||+|+.|
T Consensus       295 ~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         295 ELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             HHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence            2344788899998876 446799999999999999999999999876

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8e-40  Score=301.90  Aligned_cols=311  Identities=32%  Similarity=0.493  Sum_probs=263.1

Q ss_pred             CEEEEEcCCCCCcceEEEe-ecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-------------------CCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQE-VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------------------PKGASPY   60 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~-~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~~   60 (335)
                      |||+++..++.+..+.+.+ .+.|.+.+++|+|||.++++|++|++.+.|.++.                   ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            8999999877766677765 4777789999999999999999999988775431                   2346889


Q ss_pred             CCCceEEEEEEecCCCCCCCCCCEEEEec-------------------CCcceeeEEEecCCceEeCCCCCChhhhccCc
Q 019790           61 PGLECSGTILSVGKNVSRWKVGDQVCALL-------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP  121 (335)
Q Consensus        61 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~  121 (335)
                      +|||++|+|+++|+++++|++||+|++..                   .+|++++|+.++...++++|+++++.++++++
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~  160 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP  160 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence            99999999999999999999999998741                   24899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeC
Q 019790          122 EVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY  201 (335)
Q Consensus       122 ~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~  201 (335)
                      +++.+||+++ ...++++++++||          +|++|.+|++++++|+.+|++++++++++ +++.++++|++.+.+.
T Consensus       161 ~~~~ta~~~~-~~~~~~~g~~vlI----------~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~  228 (350)
T cd08274         161 CSYSTAENML-ERAGVGAGETVLV----------TGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILR  228 (350)
T ss_pred             cHHHHHHHHH-hhcCCCCCCEEEE----------EcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeC
Confidence            9999999998 7788999999999          99889999999999999999999988665 7888888998766665


Q ss_pred             CCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhh
Q 019790          202 KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN  281 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (335)
                      ....+.+  .+.+.++++|++|||+|+..+..++++++++|+++.+|........++...++.+++++.++....     
T Consensus       229 ~~~~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  301 (350)
T cd08274         229 DAPLLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT-----  301 (350)
T ss_pred             CCccHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC-----
Confidence            5444433  556677789999999999888899999999999999986543324566667678888988876532     


Q ss_pred             HHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          282 KALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           ...++.+++++.++.+++.+.+.|+++++++|++.+..++..+|+|++|
T Consensus       302 -----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         302 -----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             -----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence                 1234448899999999888889999999999999999888889999986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.2e-39  Score=297.13  Aligned_cols=320  Identities=30%  Similarity=0.406  Sum_probs=275.3

Q ss_pred             EEcCCCCCc--ceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCC
Q 019790            5 VITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG   82 (335)
Q Consensus         5 ~~~~~~~~~--~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~G   82 (335)
                      +++.++.+.  .+++++.+.|++.+++|+||+.++++|+.|+..+.+..+.....|.++|+|++|+|+++|++++.+++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G   81 (323)
T cd05282           2 VYTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVG   81 (323)
T ss_pred             eeCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCC
Confidence            345666665  788999999999999999999999999999998887765444457899999999999999999999999


Q ss_pred             CEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchH
Q 019790           83 DQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI  162 (335)
Q Consensus        83 d~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~  162 (335)
                      |+|+++...|+|++|+.++.+.++++|+++++.+++.++....+||+++.....+.+++++||          +|+.+.+
T Consensus        82 d~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI----------~g~~~~v  151 (323)
T cd05282          82 QRVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQ----------NAANSAV  151 (323)
T ss_pred             CEEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEE----------cccccHH
Confidence            999998645899999999999999999999999999999999999999988888899999999          9988999


Q ss_pred             HHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCC
Q 019790          163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG  242 (335)
Q Consensus       163 G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G  242 (335)
                      |++++++|+.+|++++++++++++.+.++++|.+.++++....+...+.+.++++++|+++||+|+......+++++++|
T Consensus       152 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g  231 (323)
T cd05282         152 GRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGG  231 (323)
T ss_pred             HHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCC
Confidence            99999999999999999999999999999999999998887778888888888889999999999988788899999999


Q ss_pred             EEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHH
Q 019790          243 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM  322 (335)
Q Consensus       243 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~  322 (335)
                      +++.+|........++...+..+++++.+...........+......++.+++++.++.+.+.+.+.|+++++++|++.+
T Consensus       232 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~  311 (323)
T cd05282         232 TLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAA  311 (323)
T ss_pred             EEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHH
Confidence            99999876544334555555558899888876543211012334556777899999999888778999999999999999


Q ss_pred             HhCCCceeEEEe
Q 019790          323 ESSQHIGKIMLV  334 (335)
Q Consensus       323 ~~~~~~gkvvi~  334 (335)
                      .+++..+|+|++
T Consensus       312 ~~~~~~~kvv~~  323 (323)
T cd05282         312 EQPGRGGKVLLT  323 (323)
T ss_pred             hcCCCCceEeeC
Confidence            998888898874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=1.7e-39  Score=297.02  Aligned_cols=322  Identities=33%  Similarity=0.467  Sum_probs=269.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++..+|.+..+++++.+.|.+.++||+||+.++++|++|++...|.++. ..+|.++|+|++|+|+.+|++++.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEEEeCCCCCCCC
Confidence            89999999998889999999999999999999999999999999988887643 23477899999999999999999999


Q ss_pred             CCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      +||+|+... ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....++++++++|          +|+.
T Consensus        81 ~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI----------~g~~  150 (327)
T PRK10754         81 VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLF----------HAAA  150 (327)
T ss_pred             CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEE----------EeCC
Confidence            999998653 35889999999999999999999999999999999999999878889999999999          9989


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      |.+|++++++|+.+|++|+++++++++.+.++++|++.+++.....+.+.+++.++++++|+++||+|+......+++++
T Consensus       151 g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~  230 (327)
T PRK10754        151 GGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQ  230 (327)
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999988888888888888899998889999999999988888999999


Q ss_pred             CCCEEEEEeccCCCccccChhHHhhcceE-EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHH
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLFAKRLT-VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAA  316 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~  316 (335)
                      ++|+++.+|.........+...+..++.. ...........  ........++.+++++.+|.+++.  ..+.|++++++
T Consensus       231 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~  308 (327)
T PRK10754        231 RRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYIT--TREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQ  308 (327)
T ss_pred             cCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccC--CHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHH
Confidence            99999999876532222333332222211 11111111111  111233455568899999998753  47889999999


Q ss_pred             HHHHHHHhCCCceeEEEeC
Q 019790          317 EAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       317 ~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++.+.+++..+|+|++|
T Consensus       309 ~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        309 RAHEILESRATQGSSLLIP  327 (327)
T ss_pred             HHHHHHHcCCCcceEEEeC
Confidence            9999999999999999986

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=9.9e-40  Score=299.73  Aligned_cols=310  Identities=33%  Similarity=0.476  Sum_probs=249.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCC-CCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~   79 (335)
                      ||+++...++..  .++++.+.|.+.++||+|||.++|||+||++.+.+..+.... |. ++|||++|+|+++| .++.|
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~-~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPP-GDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCC-CCcccCccceEEEEEec-cccCC
Confidence            788887766543  346677667789999999999999999999999997655432 33 89999999999999 77889


Q ss_pred             CCCCEEEEe------------------c--------------CCcceeeEEEecCCceEe-CCCCCChhhhccCcchHHH
Q 019790           80 KVGDQVCAL------------------L--------------GGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        80 ~~Gd~V~~~------------------~--------------~~g~~~~~~~~~~~~~~~-~p~~~~~~~aa~~~~~~~~  126 (335)
                      ++||||..-                  |              .+|+|+||+.+|.+.++. +|+++ +.+++++..++.+
T Consensus        77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~  155 (350)
T COG1063          77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLAT  155 (350)
T ss_pred             CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhh
Confidence            999999631                  1              248999999999765555 57877 5666669999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCc
Q 019790          127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTE  204 (335)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~  204 (335)
                      ++++........++.+++|          +| +|++|++++++++.+|+ +|+++++++++++.+++ .+++.+.+....
T Consensus       156 ~~~~~a~~~~~~~~~~V~V----------~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~  224 (350)
T COG1063         156 AYHGHAERAAVRPGGTVVV----------VG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED  224 (350)
T ss_pred             hhhhhhhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc
Confidence            9877545555566668999          87 89999999999999998 78888999999999998 667666665555


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      +....+.+.+++.++|++|||+|... +..+++.++++|+++.+|........++...++.|++++.|+...... .   
T Consensus       225 ~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~-~---  300 (350)
T COG1063         225 DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGR-E---  300 (350)
T ss_pred             cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCc-c---
Confidence            67778888998889999999999754 788999999999999999887553357778889999999998432111 1   


Q ss_pred             HHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  335 (335)
                           .++.+++++.+|++.+  ++++.++++|+++|++.+.+.+. .-|+++.|
T Consensus       301 -----~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         301 -----DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             -----cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence                 1233889999999776  55899999999999999987554 45998875

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=3.9e-40  Score=302.81  Aligned_cols=293  Identities=18%  Similarity=0.221  Sum_probs=231.4

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC---CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~---~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |++++..++   .+++++.+.|+ +++||+|||.++|||++|++.+.|....   ...+|.++|||++|+|+++|.+  .
T Consensus         4 ~~~~~~~~~---~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           4 QVYRLVRPK---FFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cceEEeccc---eEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            477777655   49999999985 9999999999999999999999987532   1357999999999999998764  6


Q ss_pred             CCCCCEEEEe------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh
Q 019790           79 WKVGDQVCAL------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT  134 (335)
Q Consensus        79 ~~~Gd~V~~~------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~  134 (335)
                      |++||+|+..                        ..+|+|+||+.+|++.++++|+++++++|+ +..+.+++|+++...
T Consensus        78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~  156 (341)
T cd08237          78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRF  156 (341)
T ss_pred             cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHH
Confidence            9999999753                        135889999999999999999999999877 556889999988543


Q ss_pred             --cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhh-CC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          135 --SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       135 --~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                        ..+++|++|||          .| +|++|++++|++++ .| .+|+++++++++++.+++.+....++    .+    
T Consensus       157 ~~~~~~~g~~VlV----------~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~----  217 (341)
T cd08237         157 EQIAHKDRNVIGV----------WG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DI----  217 (341)
T ss_pred             hhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hh----
Confidence              35688999999          88 69999999999996 55 58999999999999888765543221    11    


Q ss_pred             HHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHH
Q 019790          211 KEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV  286 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (335)
                         ....++|++|||+|+    ..+..+++.++++|+++.+|.... ..+++...++.+++++.++.....         
T Consensus       218 ---~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~~---------  284 (341)
T cd08237         218 ---PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRSTR---------  284 (341)
T ss_pred             ---hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEecccCH---------
Confidence               112369999999995    347889999999999999997543 345677778889999998754321         


Q ss_pred             HHHHHHHHHHHHCC-----ccccccccccchh---hHHHHHHHHHhCCCceeEEEeC
Q 019790          287 SEVEKNVWPAIAVG-----KVKPVIYKYLPLC---EAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       287 ~~~~~~~~~~~~~g-----~~~~~~~~~~~l~---~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                       ..++.+++++.++     .+++.+++.|+++   +++++++.+.++ ..||+|+.+
T Consensus       285 -~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         285 -EDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             -HHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence             1133488889988     5777889999985   666666666554 578999874

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.6e-39  Score=298.20  Aligned_cols=316  Identities=26%  Similarity=0.380  Sum_probs=260.6

Q ss_pred             EEEEEcCC---CCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         2 ka~~~~~~---~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      ||+++..+   ++++.++..+.|.|+++++||+|||.++++|++|+..+.+..+. ..+|.++|+|++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   79 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGVVVAVGDEVTL   79 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEEEEEeCCCCCC
Confidence            68888887   77888999999999999999999999999999999988776532 335789999999999999999999


Q ss_pred             CCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC-----CCEEEEeeccc
Q 019790           79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVDFCSI  150 (335)
Q Consensus        79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~-----~~~vli~~~~~  150 (335)
                      |++||+|+++.   ..|+|++|+.++.+.++++|+++++++++.++.+.+|||+++....++++     ++++||     
T Consensus        80 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV-----  154 (336)
T TIGR02817        80 FKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLI-----  154 (336)
T ss_pred             CCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEE-----
Confidence            99999999874   35899999999999999999999999999999999999999988888887     999999     


Q ss_pred             cccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-
Q 019790          151 SYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-  228 (335)
Q Consensus       151 ~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-  228 (335)
                           +|+++.+|++++|+|+.+ |++|+++++++++.+.++++|++.++++.. .+.+.+++. .++++|+++|++++ 
T Consensus       155 -----~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~-~~~~vd~vl~~~~~~  227 (336)
T TIGR02817       155 -----IGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKL-GLEAVSYVFSLTHTD  227 (336)
T ss_pred             -----EcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHh-cCCCCCEEEEcCCcH
Confidence                 999999999999999998 999999999999999999999999988654 667777764 55689999999854 


Q ss_pred             hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH--HHHHHHHHHHHHHCCcccccc
Q 019790          229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI--VSEVEKNVWPAIAVGKVKPVI  306 (335)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~  306 (335)
                      ......+++++++|+++.++..    ..++...+..+++++.+..+...........  ....++.+++++.++.+++.+
T Consensus       228 ~~~~~~~~~l~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~  303 (336)
T TIGR02817       228 QHFKEIVELLAPQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTL  303 (336)
T ss_pred             HHHHHHHHHhccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccc
Confidence            6678899999999999987532    2344444455556666544331111111111  124566688999999998776


Q ss_pred             cccc---chhhHHHHHHHHHhCCCceeEEEe
Q 019790          307 YKYL---PLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       307 ~~~~---~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .+.+   +++++++|++.+.+++..||+++.
T Consensus       304 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       304 AETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             hhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            5555   479999999999999988998874

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=4.8e-39  Score=292.10  Aligned_cols=323  Identities=59%  Similarity=0.969  Sum_probs=279.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++...+.+..+++.+.+.|.+.+++|+||+.++++|++|++...+..+.....|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            99999998887777889888888889999999999999999999988876655555688999999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++..+|+|++|+.++.+.++++|+++++.++++++.++.++|+++.+...+.++++++|          +|+++
T Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv----------~g~~~  150 (323)
T cd05276          81 VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLI----------HGGAS  150 (323)
T ss_pred             CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEE----------EcCcC
Confidence            99999999777999999999999999999999999999999999999999888888999999999          99899


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      .+|++++++++..|++|+++++++++.+.+++++.+.+++.....+...+.+.+.++++|++++|+|+..+...++++++
T Consensus       151 ~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~  230 (323)
T cd05276         151 GVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAP  230 (323)
T ss_pred             hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhcc
Confidence            99999999999999999999999999998988998888888777777778887777789999999999888888999999


Q ss_pred             CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790          241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ  320 (335)
Q Consensus       241 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~  320 (335)
                      +|+++.+|........++...++.+++++.++.................++.+++++.++++.+...+.|++++++++++
T Consensus       231 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  310 (323)
T cd05276         231 DGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHR  310 (323)
T ss_pred             CCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHH
Confidence            99999998665433345555556788999888765432222223345566668889999998877888999999999999


Q ss_pred             HHHhCCCceeEEE
Q 019790          321 LMESSQHIGKIML  333 (335)
Q Consensus       321 ~~~~~~~~gkvvi  333 (335)
                      .+.+++..+|+++
T Consensus       311 ~~~~~~~~~kvv~  323 (323)
T cd05276         311 RMESNEHIGKIVL  323 (323)
T ss_pred             HHHhCCCcceEeC
Confidence            9998888888774

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=4.5e-39  Score=293.69  Aligned_cols=316  Identities=22%  Similarity=0.329  Sum_probs=260.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.+++++.+++++.+.|.+.++||+||+.++++|++|+..+.|..+....+|.++|||++|+|+++  +++.|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            899999999887779999999999999999999999999999999988876544456789999999999998  456799


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC--C-CCCEEEEeecccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL--S-PGESFLVDFCSIS  151 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~--~-~~~~vli~~~~~~  151 (335)
                      +||+|++..      .+|+|++|+.++.+.++++|+++++++++.+++.+.+||+++......  . .+++|+|      
T Consensus        79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI------  152 (325)
T cd05280          79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLV------  152 (325)
T ss_pred             CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEE------
Confidence            999999863      368999999999999999999999999999999999999998655433  5 3579999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                          +|++|.+|++++++|+.+|++|+++++++++++.++++|++.+++....  .....+.+.++++|++|||+|+..+
T Consensus       153 ----~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~  226 (325)
T cd05280         153 ----TGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVL  226 (325)
T ss_pred             ----ECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHH
Confidence                9988999999999999999999999999999999999999888876543  2233444455579999999999888


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|........++...++.+++++.+.........    .....++.+.+++..+ +.+.+..+|+
T Consensus       227 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~  301 (325)
T cd05280         227 ANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPME----LRKQVWQKLATEWKPD-LLEIVVREIS  301 (325)
T ss_pred             HHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchh----HHHHHHHHHHHHHhcC-CccceeeEec
Confidence            9999999999999999876543334555555578888888765533211    1223344466666666 4445778999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+.+++..||+|+++
T Consensus       302 ~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         302 LEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHHHHHHHHHHhcCCcceEEEEeC
Confidence            999999999999999999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2.5e-39  Score=303.21  Aligned_cols=313  Identities=27%  Similarity=0.471  Sum_probs=262.3

Q ss_pred             CEEEEEc--CCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC---------CCCCCCCCCCceEEE
Q 019790            1 MKAIVIT--QPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGASPYPGLECSGT   68 (335)
Q Consensus         1 mka~~~~--~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~---------~~~~p~~~G~e~~G~   68 (335)
                      |||+++.  .++++ +.+++++.+.|+++++||+||+.++++|.+|++...+....         ....+.++|||++|+
T Consensus        13 ~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~   92 (393)
T cd08246          13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGI   92 (393)
T ss_pred             hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEE
Confidence            7888875  34555 35899999999999999999999999999999887665110         011134889999999


Q ss_pred             EEEecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccC
Q 019790           69 ILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF  120 (335)
Q Consensus        69 V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~  120 (335)
                      |+++|++++.|++||+|++++                            ..|+|++|+.++...++++|+++++++++.+
T Consensus        93 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l  172 (393)
T cd08246          93 VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAY  172 (393)
T ss_pred             EEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhh
Confidence            999999999999999998864                            2489999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHh--cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          121 PEVACTVWSTVFMT--SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       121 ~~~~~~a~~~l~~~--~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      +.++.|||+++...  ++++++++++|          +|+.|.+|++++++|+.+|++++++++++++.+.++++|++.+
T Consensus       173 ~~~~~tA~~al~~~~~~~~~~g~~vlV----------~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~  242 (393)
T cd08246         173 MLVGATAYRMLFGWNPNTVKPGDNVLI----------WGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGV  242 (393)
T ss_pred             cccHHHHHHHHhhcccccCCCCCEEEE----------ECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEE
Confidence            99999999998655  67899999999          9988999999999999999999999999999999999999988


Q ss_pred             EeCCCc----------------------cHHHHHHHHhCCC-cccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc
Q 019790          199 INYKTE----------------------DFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT  255 (335)
Q Consensus       199 ~~~~~~----------------------~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  255 (335)
                      ++.+..                      .+.+.+.+.+++. ++|++|||+|+..+..++++++++|+++.+|.......
T Consensus       243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  322 (393)
T cd08246         243 INRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNH  322 (393)
T ss_pred             EcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCC
Confidence            876432                      2556778888877 89999999998778889999999999999987554334


Q ss_pred             ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC-CCceeEEE
Q 019790          256 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-QHIGKIML  333 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi  333 (335)
                      .++...++.++.++.++.....          +.++.+++++.++.+.+.+.++|+++|+++|++.+.++ +..||+++
T Consensus       323 ~~~~~~l~~~~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         323 TYDNRYLWMRQKRIQGSHFAND----------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             CCcHHHHhhheeEEEecccCcH----------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence            4566667778888888755432          12233788899999888778899999999999999988 78889876

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.9e-39  Score=293.68  Aligned_cols=312  Identities=29%  Similarity=0.454  Sum_probs=268.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++ +..+++++.+.|.+.++||+||+.++++|++|+..+.|..+.+...|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence            9999998877 456999999999999999999999999999999998887655444577899999999999999999999


Q ss_pred             CCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+...                            ..|++++|+.++.+.++++|++++++++++++..+.|||+++.
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~  159 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK  159 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence            999998641                            2588999999999999999999999999999999999999985


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      . .++++++++||          +|+.+.+|++++++|+++|++|+++++++++.+.++++|++.++++...++...+.+
T Consensus       160 ~-~~~~~~~~vlV----------~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~  228 (341)
T cd08297         160 K-AGLKPGDWVVI----------SGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKE  228 (341)
T ss_pred             h-cCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHH
Confidence            5 58999999999          998888999999999999999999999999999998999999998887788888888


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                      .++++++|+++||.++ ......+++++++|+++.+|.......+++...+..+++++.+.....          .+.++
T Consensus       229 ~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  298 (341)
T cd08297         229 LTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT----------RQDLQ  298 (341)
T ss_pred             HhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC----------HHHHH
Confidence            8888899999996664 567888999999999999986654333556666667888888754431          12344


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+++++.++.+.+.+ ..|++++++++++.+..+...||+++++
T Consensus       299 ~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         299 EALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             HHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            488899999987655 6799999999999999999899999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.1e-38  Score=296.41  Aligned_cols=310  Identities=31%  Similarity=0.470  Sum_probs=266.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC--
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~--   78 (335)
                      |||+++..++.+  +++++.+.|.++++||+||+.++++|++|++...+..+.  .+|.++|||++|+|+.+|++++.  
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~   76 (367)
T cd08263           1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPY   76 (367)
T ss_pred             CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCC
Confidence            899999988644  888999999999999999999999999999988886643  45789999999999999999988  


Q ss_pred             -CCCCCEEEEe-------------------------------------------------cCCcceeeEEEecCCceEeC
Q 019790           79 -WKVGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPV  108 (335)
Q Consensus        79 -~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~  108 (335)
                       |++||+|++.                                                 ...|++++|+.++.+.++++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  156 (367)
T cd08263          77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL  156 (367)
T ss_pred             cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence             9999999872                                                 13588999999999999999


Q ss_pred             CCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhH
Q 019790          109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL  187 (335)
Q Consensus       109 p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~  187 (335)
                      |+++++.++++++..++|||+++.....+.+++++||          +| +|.+|++++++|+.+|++ |++++.++++.
T Consensus       157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI----------~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~  225 (367)
T cd08263         157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAV----------IG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKL  225 (367)
T ss_pred             CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence            9999999999999999999999988888899999999          85 799999999999999997 88888899999


Q ss_pred             HHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhc
Q 019790          188 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAK  265 (335)
Q Consensus       188 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~  265 (335)
                      +.++++|.+.+++++...+...+++.++++++|++|||+++. ....++++++++|+++.+|..... ...++...++.+
T Consensus       226 ~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  305 (367)
T cd08263         226 AKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRR  305 (367)
T ss_pred             HHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhC
Confidence            999999999999988888888888888778899999999987 778899999999999999865432 334555555568


Q ss_pred             ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ++++.++.....         .+.++.+++++.++.+++.  +.+.+++++++++++.+++++..||+|+.
T Consensus       306 ~~~~~~~~~~~~---------~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         306 GIKIIGSYGARP---------RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CeEEEecCCCCc---------HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            888777432111         1234558899999998763  57889999999999999999988999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.2e-38  Score=294.34  Aligned_cols=310  Identities=22%  Similarity=0.333  Sum_probs=256.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.   +++++.+.|.+.++||+|||.++++|++|++.+.+..+. ...|.++|||++|+|+++|+++++|+
T Consensus         1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~   76 (351)
T cd08285           1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFK   76 (351)
T ss_pred             CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccC
Confidence            99999998764   788899999999999999999999999999988776543 23588999999999999999999999


Q ss_pred             CCCEEEEec------------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHHH
Q 019790           81 VGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVW  128 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a~  128 (335)
                      +||+|++..                              .+|+|++|+.++.+  .++++|+++++++++.++.+++|||
T Consensus        77 ~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~  156 (351)
T cd08285          77 PGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF  156 (351)
T ss_pred             CCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence            999999742                              25899999999974  8999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790          129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFV  207 (335)
Q Consensus       129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  207 (335)
                      +++ ....++++++|||          +| +|++|++++|+|+.+|+ .|+++++++++.+.++++|++.++++...++.
T Consensus       157 ~~~-~~~~~~~g~~vlI----------~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  224 (351)
T cd08285         157 HGA-ELANIKLGDTVAV----------FG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVV  224 (351)
T ss_pred             HHH-HccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHH
Confidence            996 6788999999999          96 79999999999999999 58888888999999999999999998887888


Q ss_pred             HHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccCh--hHHhhcceEEEEeeccccchhhHH
Q 019790          208 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNI--TSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      +.+.+.+.++++|+++||+|+ ..+..++++++++|+++.+|..... ...++.  .....+..++.+.......     
T Consensus       225 ~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----  299 (351)
T cd08285         225 EQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGR-----  299 (351)
T ss_pred             HHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCcc-----
Confidence            888888877789999999997 4578899999999999999876542 123332  1122345556554322111     


Q ss_pred             HHHHHHHHHHHHHHHCCcccc---ccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKP---VIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~---~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  335 (335)
                          +.++.+++++.+|++++   .+.+.++++++++|++.+.+++. ..|+++++
T Consensus       300 ----~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         300 ----LRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             ----ccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence                12344889999999887   34567999999999999998874 57999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.4e-38  Score=293.86  Aligned_cols=310  Identities=30%  Similarity=0.450  Sum_probs=264.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-----------CCCCCCCCCCceEEEE
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-----------PKGASPYPGLECSGTI   69 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~V   69 (335)
                      |||+++..++.+  +++++.|.|++.++||+||+.++++|++|++.+.|..+.           ...+|.++|+|++|+|
T Consensus         1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   78 (350)
T cd08240           1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV   78 (350)
T ss_pred             CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence            899999888765  889999999999999999999999999999998876432           2234678999999999


Q ss_pred             EEecCCCCCCCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcc
Q 019790           70 LSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (335)
Q Consensus        70 ~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~  122 (335)
                      +++|++++.+++||+|+++.                           ..|++++|+.++.+.++++|+++++.+++++..
T Consensus        79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~  158 (350)
T cd08240          79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC  158 (350)
T ss_pred             EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence            99999999999999998762                           358899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeC
Q 019790          123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY  201 (335)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~  201 (335)
                      .+++||+++.....+.++++++|          +| .|.+|++++|+|+.+|+ +|+++++++++.+.++++|.+.+++.
T Consensus       159 ~~~tA~~~~~~~~~~~~~~~vlI----------~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  227 (350)
T cd08240         159 SGLTAYSAVKKLMPLVADEPVVI----------IG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG  227 (350)
T ss_pred             hhhhHHHHHHhcccCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence            99999999987777778999999          95 79999999999999999 78999989999999999999888888


Q ss_pred             CCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh
Q 019790          202 KTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE  280 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (335)
                      ++..+...+.+..++ ++|++|||+|+ .....++++|+++|+++.+|..... ...+...+..+++++.+......   
T Consensus       228 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~---  302 (350)
T cd08240         228 SDPDAAKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL---  302 (350)
T ss_pred             CCccHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH---
Confidence            777777777777766 89999999985 5678899999999999999865543 23344444557888877655432   


Q ss_pred             hHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          281 NKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                             +.+..+++++.++.+++...+.|+++++++|++.+.+++..||+++++
T Consensus       303 -------~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  350 (350)
T cd08240         303 -------EELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP  350 (350)
T ss_pred             -------HHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence                   123348889999998877778899999999999999999889999875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.1e-38  Score=286.88  Aligned_cols=303  Identities=28%  Similarity=0.380  Sum_probs=257.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++...+ |..+++++.+.|.+.++||+||+.++++|+.|++...+..     .|.++|+|++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~-----~~~~~g~e~~G~v~~~G~~v~~~~   74 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERP-----DGAVPGWDAAGVVERAAADGSGPA   74 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccCC-----CCCcccceeEEEEEEeCCCCCCCC
Confidence            8999998765 7779999999999999999999999999999998765221     256899999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.+||+++...... ++++++|          +|+.+
T Consensus        75 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli----------~g~~~  143 (305)
T cd08270          75 VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLV----------TGASG  143 (305)
T ss_pred             CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEE----------ECCCc
Confidence            999999987679999999999999999999999999999999999999999766655 5999999          99889


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      .+|.+++++++..|++|+++++++++.+.++++|++..++...        +..+ +++|+++||+|+.....+++++++
T Consensus       144 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~  214 (305)
T cd08270         144 GVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAP  214 (305)
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999876554321        1222 479999999999888889999999


Q ss_pred             CCEEEEEeccCCCccccChhHHhh--cceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHH
Q 019790          241 DGRLFIIGTQGGAKTELNITSLFA--KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA  318 (335)
Q Consensus       241 ~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a  318 (335)
                      +|+++.+|........++...+..  ++.++.++.+..  .    ....+.++.+++++.++++++.+.++++++++++|
T Consensus       215 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a  288 (305)
T cd08270         215 GGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD--G----EPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEA  288 (305)
T ss_pred             CCEEEEEeccCCCcccccHHHHhcccccceEEEEEccC--H----HHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHH
Confidence            999999987653333455555544  588888877654  1    11234566688999999998878889999999999


Q ss_pred             HHHHHhCCCceeEEEeC
Q 019790          319 HQLMESSQHIGKIMLVP  335 (335)
Q Consensus       319 ~~~~~~~~~~gkvvi~~  335 (335)
                      ++.+.+++..||+|+++
T Consensus       289 ~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         289 AEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            99999999889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.4e-38  Score=297.28  Aligned_cols=309  Identities=28%  Similarity=0.436  Sum_probs=260.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..+   +.+++++.+.|.+ .+++|+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|+++++|
T Consensus         1 m~a~~~~~~---~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~   76 (386)
T cd08283           1 MKALVWHGK---GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRNL   76 (386)
T ss_pred             CeeEEEecC---CCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCCC
Confidence            999999865   4489999999988 59999999999999999999999987553 358899999999999999999999


Q ss_pred             CCCCEEEEec-----------------------------------------------CCcceeeEEEecCC--ceEeCCC
Q 019790           80 KVGDQVCALL-----------------------------------------------GGGGYAEKVAVPAG--QVLPVPS  110 (335)
Q Consensus        80 ~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~--~~~~~p~  110 (335)
                      ++||+|+...                                               ..|+|++|+.++.+  .++++|+
T Consensus        77 ~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~  156 (386)
T cd08283          77 KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD  156 (386)
T ss_pred             CCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence            9999998742                                               14889999999988  8999999


Q ss_pred             CCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHH
Q 019790          111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV  189 (335)
Q Consensus       111 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~  189 (335)
                      +++++++++++..+++||+++ ...++.++++|||          +| +|.+|.+++++|+.+|+ +|+++++++++.+.
T Consensus       157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV----------~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~  224 (386)
T cd08283         157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAV----------WG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEM  224 (386)
T ss_pred             CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            999999999999999999999 7889999999999          96 79999999999999998 59999999999999


Q ss_pred             HHHcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChh----------------------hHHHhhccccCCCEEEE
Q 019790          190 CKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGAS----------------------YFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       190 ~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~----------------------~~~~~~~~l~~~G~~v~  246 (335)
                      +++++...++++... ++...+.+.+.++++|++|||+|++                      .+..++++++++|+++.
T Consensus       225 ~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~  304 (386)
T cd08283         225 ARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSI  304 (386)
T ss_pred             HHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEE
Confidence            998844467777666 4788888888877899999999753                      46778999999999999


Q ss_pred             EeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHh
Q 019790          247 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMES  324 (335)
Q Consensus       247 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~  324 (335)
                      +|........++...++.+++++.+.....          .+.++.+++++.++++.+  ++.+.|+++++++|++.+.+
T Consensus       305 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~  374 (386)
T cd08283         305 IGVYGGTVNKFPIGAAMNKGLTLRMGQTHV----------QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDK  374 (386)
T ss_pred             EcCCCCCcCccCHHHHHhCCcEEEeccCCc----------hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHh
Confidence            987654333455556678888888864211          223445888899999876  35688999999999999988


Q ss_pred             CC-CceeEEEeC
Q 019790          325 SQ-HIGKIMLVP  335 (335)
Q Consensus       325 ~~-~~gkvvi~~  335 (335)
                      ++ ..+|+|++|
T Consensus       375 ~~~~~~k~~~~~  386 (386)
T cd08283         375 KEDGCIKVVLKP  386 (386)
T ss_pred             CCCCeEEEEecC
Confidence            76 568999986

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.5e-38  Score=290.60  Aligned_cols=317  Identities=21%  Similarity=0.296  Sum_probs=252.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.++++..+++++.+.|.+.++||+||+.++++|++|.....+.......+|.++|||++|+|+++|  +++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            9999999988877899999999999999999999999999999876643222222357899999999999954  56799


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhc--C-CCCCCEEEEeecccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--H-LSPGESFLVDFCSIS  151 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~--~-~~~~~~vli~~~~~~  151 (335)
                      +||+|++..      ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++....  . ..+++++||      
T Consensus        79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI------  152 (326)
T cd08289          79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLV------  152 (326)
T ss_pred             CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEE------
Confidence            999999875      3699999999999999999999999999999999999998885433  2 345789999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                          +|++|.+|.+++++|+.+|++|+++++++++.+.++++|++.+++..+. ..+.+.+.. ++++|++|||+|+..+
T Consensus       153 ----~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~~-~~~~d~vld~~g~~~~  226 (326)
T cd08289         153 ----TGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPLE-KQRWAGAVDPVGGKTL  226 (326)
T ss_pred             ----EcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhhc-cCCcCEEEECCcHHHH
Confidence                9988999999999999999999999999999999999999888876654 344555553 4679999999999888


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|.......+.+...++.+++++.+...........    .+.+..+...+..+.+...+.++|+
T Consensus       227 ~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  302 (326)
T cd08289         227 AYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELR----RRIWRRLATDLKPTQLLNEIKQEIT  302 (326)
T ss_pred             HHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHH----HHHHHHHHhhcCccccccccceEee
Confidence            899999999999999997644333444556667899998875432111111    1222223333332333345688999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+.+++..||+|+++
T Consensus       303 l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         303 LDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             HHHHHHHHHHHhcCcccceEEEeC
Confidence            999999999999999999999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=2.7e-38  Score=293.35  Aligned_cols=310  Identities=28%  Similarity=0.384  Sum_probs=262.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|++.++||+||+.++++|++|++...|..+  ..+|.++|+|++|+|+++|+++..|+
T Consensus         3 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08278           3 TTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVEAVGSAVTGLK   78 (365)
T ss_pred             cEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEEEeCCCcccCC
Confidence            899999987654  88999999999999999999999999999999988764  23578999999999999999999999


Q ss_pred             CCCEEEEe-------------------------------------------------cCCcceeeEEEecCCceEeCCCC
Q 019790           81 VGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        81 ~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      +||+|++.                                                 ...|+|++|+.++++.++++|++
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            99999851                                                 01378999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++++++.+++++.+|++++.....+++++++||          +| .|.+|++++++|+.+|+ .++++++++++.+.+
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI----------~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~  227 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAV----------FG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA  227 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            9999999999999999999888889999999999          96 69999999999999999 588888899999988


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceE
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLT  268 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~  268 (335)
                      +++|++.++++...++.+.+.+.+ +.++|+++||+|+ ..+..++++++++|+++.+|.... ....++...+..++++
T Consensus       228 ~~~g~~~~i~~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  306 (365)
T cd08278         228 KELGATHVINPKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKT  306 (365)
T ss_pred             HHcCCcEEecCCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCce
Confidence            999999999888778888888888 6789999999986 457889999999999999987532 2345666666678888


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc-ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP-VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +.++.......       .+.++.+++++.++.+.+ .+...|+++++++|++.+++++.. |+|++
T Consensus       307 ~~~~~~~~~~~-------~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~  365 (365)
T cd08278         307 IRGVIEGDSVP-------QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR  365 (365)
T ss_pred             EEEeecCCcCh-------HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence            88776533211       223444788899998854 345689999999999999887764 88774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.5e-38  Score=287.62  Aligned_cols=313  Identities=34%  Similarity=0.555  Sum_probs=273.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++.+.+.++.+++++.+.|.+.++|++|++.++++|++|++...|..+.....|.++|||++|+|+++|+++.+|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            99999998876677999998888899999999999999999999998887655445688999999999999999999999


Q ss_pred             CCCEEEEecC---------------------CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC
Q 019790           81 VGDQVCALLG---------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP  139 (335)
Q Consensus        81 ~Gd~V~~~~~---------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~  139 (335)
                      +||+|++...                     +|+|++|+.++.+.++++|+++++.+++.++.++++||+++.....+.+
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  160 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP  160 (336)
T ss_pred             CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence            9999998751                     5889999999999999999999999999999999999999988889999


Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKG  218 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~  218 (335)
                      +++++|          +| .+++|+++++++++.|++|+++++++++.+.+++++.+.+++... ..+...+.+.+++++
T Consensus       161 g~~vli----------~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  229 (336)
T cd08276         161 GDTVLV----------QG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRG  229 (336)
T ss_pred             CCEEEE----------EC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCC
Confidence            999999          85 899999999999999999999999999999998899988888776 678888888888889


Q ss_pred             ccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHH
Q 019790          219 VDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA  298 (335)
Q Consensus       219 ~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (335)
                      +|+++||++......++++++++|+++.+|.............++.+++++.+.....          ...++.+.+++.
T Consensus       230 ~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~  299 (336)
T cd08276         230 VDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIE  299 (336)
T ss_pred             CcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHH
Confidence            9999999998888889999999999999987665433455666678899999876543          123444778888


Q ss_pred             CCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          299 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       299 ~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ++.+.+...+.+++++++++++.+.+++..+|++++
T Consensus       300 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         300 AHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             cCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            888877777899999999999999988888899875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=3.4e-38  Score=288.62  Aligned_cols=314  Identities=29%  Similarity=0.427  Sum_probs=266.1

Q ss_pred             CEEEEEcCCCC--CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~--~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+.+..++.  ++.+++++.+.|.+.++||+||+.++++|++|++...|..+....+|.++|+|++|+|+.+|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   81 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD   81 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence            99999999887  7889999999999999999999999999999999888876544456889999999999999999999


Q ss_pred             CCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccc
Q 019790           79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGG  158 (335)
Q Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~  158 (335)
                      |++||+|+++. .|+|++|+.++.+.++++|++  ..++++++.++.+||+++.+..+++++++++|          +|+
T Consensus        82 ~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI----------~ga  148 (329)
T cd08250          82 FKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLV----------TAA  148 (329)
T ss_pred             CCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEE----------EeC
Confidence            99999999885 488999999999999999997  35677899999999999988889999999999          999


Q ss_pred             cchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccc
Q 019790          159 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL  238 (335)
Q Consensus       159 ~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (335)
                      +|.+|++++++|+..|++|+++++++++.+.++++|.+.+++.....+...+....+ +++|++|||+|+.....+++++
T Consensus       149 ~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~~l  227 (329)
T cd08250         149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVDNL  227 (329)
T ss_pred             ccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHHHh
Confidence            999999999999999999999999999999999999988888777777666666554 6899999999998888899999


Q ss_pred             cCCCEEEEEeccCCCc----------cccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc--c
Q 019790          239 NIDGRLFIIGTQGGAK----------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--I  306 (335)
Q Consensus       239 ~~~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~  306 (335)
                      +++|+++.+|......          ..++ ...+.+++++.+..+.....     ...+.+..+++++.++.+.+.  .
T Consensus       228 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~  301 (329)
T cd08250         228 ALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK-----LIPQHLDRLLQLYQRGKLVCEVDP  301 (329)
T ss_pred             ccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH-----HHHHHHHHHHHHHHCCCeeeeECC
Confidence            9999999998765321          1122 23456788888876543221     134456668899999988773  4


Q ss_pred             ccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          307 YKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       307 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .+.++++++++|++.+.+++..+|++++
T Consensus       302 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         302 TRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             ccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            5669999999999999998888898874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=4.2e-38  Score=287.26  Aligned_cols=313  Identities=23%  Similarity=0.348  Sum_probs=259.2

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+++...+.++.+++++.|.|.+.++||+||+.++++|++|++.+.|..+.....|.++|||++|+|+.  ++++.|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            6889998888888999999999999999999999999999999998887644344588899999999998  56678999


Q ss_pred             CCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh--cCCCCCC-EEEEeeccccc
Q 019790           82 GDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGE-SFLVDFCSISY  152 (335)
Q Consensus        82 Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~--~~~~~~~-~vli~~~~~~~  152 (335)
                      ||+|+++.      ..|++++|+.++.+.++++|++++++++++++..+.+|+.++...  ..+.+++ +++|       
T Consensus        79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI-------  151 (323)
T TIGR02823        79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLV-------  151 (323)
T ss_pred             CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEE-------
Confidence            99999874      358999999999999999999999999999999999999887543  3378898 9999       


Q ss_pred             cccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHH
Q 019790          153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ  232 (335)
Q Consensus       153 ~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (335)
                         +|++|.+|.+++++|+++|++++++++++++.+.++++|++.+++..+...  .++..+.+ ++|+++||+|+..+.
T Consensus       152 ---~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~~~~  225 (323)
T TIGR02823       152 ---TGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGHTLA  225 (323)
T ss_pred             ---EcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCC-CceEEEECccHHHHH
Confidence               998899999999999999999999998998889999999988887654332  34445444 599999999998888


Q ss_pred             HhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 019790          233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  312 (335)
Q Consensus       233 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l  312 (335)
                      ..+++++++|+++.+|.......+.+...++.+++++.+........    ......++.+.+++..+.+.+. .+.|++
T Consensus       226 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l  300 (323)
T TIGR02823       226 NVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPM----ALREAAWQRLATDLKPRNLESI-TREITL  300 (323)
T ss_pred             HHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCc----hhHHHHHHHHHHHhhcCCCcCc-eeeecH
Confidence            89999999999999997654333444455667889988876542211    1223345557777878887665 468999


Q ss_pred             hhHHHHHHHHHhCCCceeEEEe
Q 019790          313 CEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       313 ~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +++++|++.+.+++..+|+|+.
T Consensus       301 ~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       301 EELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             HHHHHHHHHHhCCCccceEEEe
Confidence            9999999999999999999875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.6e-38  Score=291.53  Aligned_cols=309  Identities=28%  Similarity=0.446  Sum_probs=259.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.   +.+.+.+.|.+ .++||+||+.++++|++|++.+.|.++. ..+|.++|+|++|+|+++|+++++|
T Consensus         1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~   76 (347)
T cd05278           1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRL   76 (347)
T ss_pred             CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCcccc
Confidence            89999987654   88999999999 9999999999999999999999887754 3458899999999999999999999


Q ss_pred             CCCCEEEEe------------------------------cCCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHH
Q 019790           80 KVGDQVCAL------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV  127 (335)
Q Consensus        80 ~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a  127 (335)
                      ++||+|++.                              ..+|+|++|++++.+  .++++|++++++++++++.+++||
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta  156 (347)
T cd05278          77 KPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG  156 (347)
T ss_pred             CCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence            999999872                              125899999999987  899999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      |+++ ...+++++++|||          .| .|.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.++++.+..+
T Consensus       157 ~~~~-~~~~~~~~~~VlI----------~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  224 (347)
T cd05278         157 FHGA-ELAGIKPGSTVAV----------IG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDI  224 (347)
T ss_pred             eehh-hhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchH
Confidence            9998 6788999999999          86 59999999999999997 8888888888888889999999998888778


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790          207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI  285 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (335)
                      .+.+++.++++++|++|||+++ ..+..++++|+++|+++.+|..............+.+++++.+.....         
T Consensus       225 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  295 (347)
T cd05278         225 VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---------  295 (347)
T ss_pred             HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---------
Confidence            8888888887889999999997 567888999999999999985543311111222345677777654221         


Q ss_pred             HHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790          286 VSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQH-IGKIMLVP  335 (335)
Q Consensus       286 ~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~  335 (335)
                       .+.++.+++++.++.+++.  +...|+++++++|++.+.+++. .+|+|++|
T Consensus       296 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         296 -RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             -hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence             2244558889999998863  5688999999999999988776 68999886

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.6e-38  Score=290.49  Aligned_cols=309  Identities=30%  Similarity=0.499  Sum_probs=266.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|.+.+++|+||+.++++|++|+....|..+. ..+|.++|+|++|.|+.+|++++.|+
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~   77 (345)
T cd08260           1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWR   77 (345)
T ss_pred             CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCC
Confidence            999999988765  899999999999999999999999999999998887653 34578999999999999999999999


Q ss_pred             CCCEEEE---------------------------ecCCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           81 VGDQVCA---------------------------LLGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      +||+|++                           +..+|+|++|+.++..  .++++|+++++++++.++.+.++||+++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  157 (345)
T cd08260          78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL  157 (345)
T ss_pred             CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence            9999986                           3346899999999975  8999999999999999999999999999


Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARV  210 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~  210 (335)
                      ....++.++++++|          +| .|.+|++++++|+.+|++|+++++++++.+.++++|++.+++.+. .++...+
T Consensus       158 ~~~~~~~~~~~vlV----------~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~  226 (345)
T cd08260         158 VHQARVKPGEWVAV----------HG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAV  226 (345)
T ss_pred             HHccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHH
Confidence            88888999999999          98 799999999999999999999999999999999999999998887 6777778


Q ss_pred             HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCc--cccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790          211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVS  287 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
                      .+...+ ++|++|||+|+ ......+++++++|+++.+|......  ..+++..+..+++++.+.....          .
T Consensus       227 ~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~  295 (345)
T cd08260         227 RDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP----------A  295 (345)
T ss_pred             HHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC----------H
Confidence            888777 89999999985 56778899999999999998765432  3455555667888888865422          1


Q ss_pred             HHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          288 EVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       288 ~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ..++.+++++.++++.+.  +.+.++++++++|++.+.+++..||+|++
T Consensus       296 ~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         296 HRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             HHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence            234448889999988753  57889999999999999999988998875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=3.2e-38  Score=296.12  Aligned_cols=314  Identities=27%  Similarity=0.453  Sum_probs=263.8

Q ss_pred             CEEEEEcC--CCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC---------CCCCC-CCCCCceEE
Q 019790            1 MKAIVITQ--PGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGAS-PYPGLECSG   67 (335)
Q Consensus         1 mka~~~~~--~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~e~~G   67 (335)
                      |||+++..  +++| +.+++.+.+.|.+.++||+||+.++++|.+|.+...+....         ....| .++|||++|
T Consensus         8 ~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G   87 (398)
T TIGR01751         8 MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASG   87 (398)
T ss_pred             hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEE
Confidence            89999965  6665 67999999999999999999999999999998776553210         00123 379999999


Q ss_pred             EEEEecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhcc
Q 019790           68 TILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAA  119 (335)
Q Consensus        68 ~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~  119 (335)
                      +|+++|++++.|++||+|++.+                            ..|+|++|+.++.+.++++|+++++++++.
T Consensus        88 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~  167 (398)
T TIGR01751        88 VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAAC  167 (398)
T ss_pred             EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhh
Confidence            9999999999999999998764                            248999999999999999999999999999


Q ss_pred             CcchHHHHHHHHHH--hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE
Q 019790          120 FPEVACTVWSTVFM--TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV  197 (335)
Q Consensus       120 ~~~~~~~a~~~l~~--~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~  197 (335)
                      +..+..+||+++..  ..++.++++++|          +|++|.+|++++++|+.+|++++++++++++.+.++++|++.
T Consensus       168 ~~~~~~ta~~al~~~~~~~~~~g~~vlV----------~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~  237 (398)
T TIGR01751       168 PGLTGATAYRQLVGWNPATVKPGDNVLI----------WGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEA  237 (398)
T ss_pred             ccchHHHHHHHHhhhhccCCCCCCEEEE----------EcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCE
Confidence            99999999999854  477899999999          998899999999999999999999998999999999999999


Q ss_pred             EEeCCCc----------------------cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc
Q 019790          198 CINYKTE----------------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT  255 (335)
Q Consensus       198 ~~~~~~~----------------------~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  255 (335)
                      ++|.+..                      .+.+.+.+.+.++++|++|||+|...+..++++++++|+++.+|.......
T Consensus       238 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~  317 (398)
T TIGR01751       238 VIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNH  317 (398)
T ss_pred             EecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCC
Confidence            8886542                      245567777877889999999998778889999999999999987665444


Q ss_pred             ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          256 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .++...++.++.++.++.....          +.++.+++++.++.+.+.+.+++++++++++++.+.+++..||+|++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~  386 (398)
T TIGR01751       318 DYDNRYLWMRQKRIQGSHFANL----------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVL  386 (398)
T ss_pred             CcCHHHHhhcccEEEccccCcH----------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEE
Confidence            5566666677777777654321          11334888899999988888999999999999999999988999885

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=1.2e-37  Score=283.40  Aligned_cols=320  Identities=35%  Similarity=0.568  Sum_probs=275.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++..++.+..+++.+.+.|.+.+++|+|++.++++|++|+....|..+.....|.++|||++|+|+++|+++++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            89999998776677899999999999999999999999999999988886654445688999999999999999999999


Q ss_pred             CCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      +||+|+++.     ..|++++|+.++.+.++++|+++++++++++++++.+||+++....++.++++++|          
T Consensus        81 ~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI----------  150 (325)
T cd08253          81 VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV----------  150 (325)
T ss_pred             CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE----------
Confidence            999999885     35899999999999999999999999999999999999999988789999999999          


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +|+++.+|.+++++++.+|++|+++++++++.+.+.++|.+.+++....++...+.+.+.++++|++++|+++......+
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~  230 (325)
T cd08253         151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDL  230 (325)
T ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHH
Confidence            99899999999999999999999999999999999889998888887777878888887777899999999998778889


Q ss_pred             ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA  315 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~  315 (335)
                      ++++++|+++.+|... .....+...++.++.++.+........    ....+..+.+.+++.++.+++...+.++++++
T Consensus       231 ~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  305 (325)
T cd08253         231 DVLAPGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLYTATP----EERAAAAEAIAAGLADGALRPVIAREYPLEEA  305 (325)
T ss_pred             HhhCCCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehhhcCH----HHHHHHHHHHHHHHHCCCccCccccEEcHHHH
Confidence            9999999999998755 223444555556777777665433221    12344555577888888888878889999999


Q ss_pred             HHHHHHHHhCCCceeEEEeC
Q 019790          316 AEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       316 ~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++++.+.++...||+++++
T Consensus       306 ~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         306 AAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             HHHHHHHHcCCCcceEEEeC
Confidence            99999999988899999875

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=6.8e-38  Score=290.55  Aligned_cols=310  Identities=25%  Similarity=0.368  Sum_probs=264.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.+.|.+.+++|+|++.++++|++|+..+.|..+.  .+|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccC
Confidence            999999988765  889999999999999999999999999999988886652  3577899999999999999999999


Q ss_pred             CCCEEEEe-----------------------------------------------cCCcceeeEEEecCCceEeCCCCCC
Q 019790           81 VGDQVCAL-----------------------------------------------LGGGGYAEKVAVPAGQVLPVPSGVS  113 (335)
Q Consensus        81 ~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~  113 (335)
                      +||+|++.                                               ...|+|++|+.++.+.++++|++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            99999983                                               2358899999999999999999999


Q ss_pred             hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHH
Q 019790          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKD  192 (335)
Q Consensus       114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~  192 (335)
                      +++++.+++.+.+||.++....++.+++++||          +| .|.+|.+++++|+.+|++ |+++++++++.+.+++
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI----------~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~  225 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAV----------IG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARR  225 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence            99999999999999999888889999999999          95 699999999999999996 9999999999999989


Q ss_pred             cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceEEE
Q 019790          193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQ  270 (335)
Q Consensus       193 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~  270 (335)
                      +|++.+++++...+...+.+.+.++++|+++||+++ ..+..++++++++|+++.+|.... ....++...+..++.++.
T Consensus       226 ~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  305 (363)
T cd08279         226 FGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQ  305 (363)
T ss_pred             hCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEE
Confidence            999899988877888888888877789999999995 567888999999999999986552 234566666666777777


Q ss_pred             EeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEE
Q 019790          271 AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIM  332 (335)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvv  332 (335)
                      ++.+.....       .+.++.+++++.++.+++  .+.++|+++|+++|++.+.+++..+.+|
T Consensus       306 ~~~~~~~~~-------~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         306 GSLYGSANP-------RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             EEEecCcCc-------HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            765533211       234555888999998876  3678899999999999999888765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=1.7e-37  Score=282.53  Aligned_cols=324  Identities=60%  Similarity=0.976  Sum_probs=279.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+.+..++.+..+++++.+.+.+.+++|+|++.++++|++|+....+..+.+..+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            89999998887777888888777789999999999999999999988776654444578999999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|++++.+|+|++|+.++...++++|+++++.++++++.+..++|+++.+...+.++++++|          +|+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv----------~g~~~  150 (325)
T TIGR02824        81 VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLI----------HGGAS  150 (325)
T ss_pred             CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEE----------EcCcc
Confidence            99999998777999999999999999999999999999999999999999878899999999999          99899


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      .+|.+++++++.+|++|+++++++++.+.++++|.+.+++.....+...+...+.++++|++++|+|+..+...++++++
T Consensus       151 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~  230 (325)
T TIGR02824       151 GIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALAL  230 (325)
T ss_pred             hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhcc
Confidence            99999999999999999999999998888888998888877777777788887777789999999998878889999999


Q ss_pred             CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790          241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ  320 (335)
Q Consensus       241 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~  320 (335)
                      +|+++.+|........++...++.+++++.+..................+..+++++.++.+++..++.+++++++++++
T Consensus       231 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  310 (325)
T TIGR02824       231 DGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHA  310 (325)
T ss_pred             CcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHH
Confidence            99999998755332345566666889999988765532222223345566668889999998877888899999999999


Q ss_pred             HHHhCCCceeEEEe
Q 019790          321 LMESSQHIGKIMLV  334 (335)
Q Consensus       321 ~~~~~~~~gkvvi~  334 (335)
                      .+.++...+|++++
T Consensus       311 ~~~~~~~~~~~v~~  324 (325)
T TIGR02824       311 LMESGDHIGKIVLT  324 (325)
T ss_pred             HHHhCCCcceEEEe
Confidence            99988888898875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-37  Score=286.18  Aligned_cols=306  Identities=32%  Similarity=0.488  Sum_probs=260.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++   .+++.+.+.|.+.++||+|||.++++|+.|+....+..+.. .+|.++|+|++|+|+++|+++++|+
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~   76 (337)
T cd08261           1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLK   76 (337)
T ss_pred             CeEEEEeCCC---ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCC
Confidence            8999998765   48999999999999999999999999999999988876543 3477899999999999999999999


Q ss_pred             CCCEEEE---------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|++                           +...|+|++|+.++++ ++++|+++++++++++ ..++++++++ .
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~  153 (337)
T cd08261          77 VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-R  153 (337)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-H
Confidence            9999987                           3235899999999999 9999999999999876 6778888888 7


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                      ..++.+++++||          +| ++.+|.+++++|+.+|++|+++++++++.+.++++++++++++....+.+.+.+.
T Consensus       154 ~~~l~~g~~vLI----------~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~  222 (337)
T cd08261         154 RAGVTAGDTVLV----------VG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLREL  222 (337)
T ss_pred             hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHH
Confidence            789999999999          96 7999999999999999999999999999999999999999998887888888888


Q ss_pred             hCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  292 (335)
Q Consensus       214 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (335)
                      +.++++|+++||+|+ ..+..++++|+++|+++.+|.... ...++...+..+++++.+...   .       ..+.++.
T Consensus       223 ~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~  291 (337)
T cd08261         223 TDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKG-PVTFPDPEFHKKELTILGSRN---A-------TREDFPD  291 (337)
T ss_pred             hCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-CCccCHHHHHhCCCEEEEecc---C-------ChhhHHH
Confidence            888889999999986 457888999999999999886542 234445555667777766421   1       1223445


Q ss_pred             HHHHHHCCcccc--ccccccchhhHHHHHHHHHhC-CCceeEEEeC
Q 019790          293 VWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESS-QHIGKIMLVP  335 (335)
Q Consensus       293 ~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~~  335 (335)
                      +.+++.+|.+++  .+...+++++++++++.+.++ ...+|+|++.
T Consensus       292 ~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         292 VIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            888999999987  677889999999999999988 4778999863

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.3e-37  Score=280.67  Aligned_cols=320  Identities=36%  Similarity=0.523  Sum_probs=273.9

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+....++.+..+.+.+.+.+.+.+++|+|+|.++++|++|++...+..+.  .+|.++|||++|+|+.+|+++.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~   78 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKV   78 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCC
Confidence            5788887777777888888888889999999999999999999988876543  34678999999999999999999999


Q ss_pred             CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG  161 (335)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~  161 (335)
                      ||+|+++...|++++|+.++.+.++++|++++..+++.++...+++++++....++.++++++|          +|++|.
T Consensus        79 G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI----------~g~~g~  148 (320)
T cd05286          79 GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLV----------HAAAGG  148 (320)
T ss_pred             CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEE----------EcCCch
Confidence            9999988535889999999999999999999999999999999999999988889999999999          998999


Q ss_pred             HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCC
Q 019790          162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  241 (335)
Q Consensus       162 ~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~  241 (335)
                      +|++++++++.+|++|+++++++++.+.++++|.+.+++.....+...+.+.+.++++|++++|+++.....++++++++
T Consensus       149 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~  228 (320)
T cd05286         149 VGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPR  228 (320)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccC
Confidence            99999999999999999999999999999999998888877777888888888888899999999988788899999999


Q ss_pred             CEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 019790          242 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL  321 (335)
Q Consensus       242 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~  321 (335)
                      |+++.+|........++...+..+++++.+........  ........++.+++++.++.+++...+.|++++++++++.
T Consensus       229 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~  306 (320)
T cd05286         229 GTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIA--TREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRD  306 (320)
T ss_pred             cEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcC--CHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHH
Confidence            99999987654333345544447788887655433221  1223445566688899999888777788999999999999


Q ss_pred             HHhCCCceeEEEeC
Q 019790          322 MESSQHIGKIMLVP  335 (335)
Q Consensus       322 ~~~~~~~gkvvi~~  335 (335)
                      +.+++..+|++++|
T Consensus       307 ~~~~~~~~~vv~~~  320 (320)
T cd05286         307 LESRKTTGKLLLIP  320 (320)
T ss_pred             HHcCCCCceEEEeC
Confidence            99988889999987

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=9.8e-38  Score=286.84  Aligned_cols=304  Identities=25%  Similarity=0.345  Sum_probs=249.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++   .+++++.+.|.|.++||+||+.++++|++|++.+.|..+.. .+|.++|||++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~   76 (339)
T PRK10083          1 MKSIVIEKPN---SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAAR   76 (339)
T ss_pred             CeEEEEecCC---eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCC
Confidence            8999999765   48999999999999999999999999999999988876432 4588999999999999999999999


Q ss_pred             CCCEEE---------------------------EecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVC---------------------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+                           ++..+|+|++|+.++.+.++++|+++++++++ +..++.+++++. .
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~-~  154 (339)
T PRK10083         77 IGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANVT-G  154 (339)
T ss_pred             CCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHHH-H
Confidence            999998                           44446899999999999999999999998876 667788888644 7


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhh-CCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      ..++++|++|+|          +| .|.+|++++|+|+. +|++ ++++++++++.+.++++|++.++++.+..+.+.+.
T Consensus       155 ~~~~~~g~~vlI----------~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~  223 (339)
T PRK10083        155 RTGPTEQDVALI----------YG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALE  223 (339)
T ss_pred             hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHh
Confidence            788999999999          99 79999999999997 5995 77777889999999999999999887766666654


Q ss_pred             HHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHH
Q 019790          212 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  290 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (335)
                      ..  +.++|++|||+|+ ..+..++++++++|+++.+|.... ...++...+..+++++.+....           .+.+
T Consensus       224 ~~--g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  289 (339)
T PRK10083        224 EK--GIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN-----------ANKF  289 (339)
T ss_pred             cC--CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC-----------hhhH
Confidence            31  2346799999995 467889999999999999987543 2333444445577777665431           1123


Q ss_pred             HHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 019790          291 KNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  335 (335)
Q Consensus       291 ~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  335 (335)
                      +.+++++.+|.+++  ++.+.|+++++++|++.+.++. ..+|+++.+
T Consensus       290 ~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        290 PVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             HHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence            44888999999887  4678999999999999998653 568999864

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.8e-38  Score=287.97  Aligned_cols=319  Identities=40%  Similarity=0.567  Sum_probs=255.0

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCC---CCCCCCCCceEEE---EEEec-C
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK---GASPYPGLECSGT---ILSVG-K   74 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~G~e~~G~---V~~vG-~   74 (335)
                      +......++.......++.+.|.|.+++++|++.++++|+.|+.+..|......   .+|.+++.++.|.   +...| .
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~   86 (347)
T KOG1198|consen    7 RVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDD   86 (347)
T ss_pred             eEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccc
Confidence            344445555667778888899999999999999999999999999999987766   6775555555544   44555 3


Q ss_pred             CCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhc------CCCCCCEEEEeec
Q 019790           75 NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS------HLSPGESFLVDFC  148 (335)
Q Consensus        75 ~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~------~~~~~~~vli~~~  148 (335)
                      .+..+..||.+.....+|+|+||.++|...++++|+++++++||+++.++.|||.++....      ++++|++|||   
T Consensus        87 ~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv---  163 (347)
T KOG1198|consen   87 VVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLV---  163 (347)
T ss_pred             cccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEE---
Confidence            3456888888888888999999999999999999999999999999999999999999999      8999999999   


Q ss_pred             cccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                             +||+|++|++++|+|++.|+..++++++++..+.++++|++.++||++.++.+.+++.+ +++||+||||+|+
T Consensus       164 -------~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  164 -------LGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGG  235 (347)
T ss_pred             -------EeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCC
Confidence                   99999999999999999997666666699999999999999999999999999999998 7899999999999


Q ss_pred             hhHHHhhccccCCCEEEEEeccCCCccccChhHHh--hcc-----eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF--AKR-----LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       229 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      ........++...|+...++.............++  .+.     ..+.+..........    ..+.++.+.+++.+|+
T Consensus       236 ~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~l~~~ie~gk  311 (347)
T KOG1198|consen  236 STLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVP----SAEYLKALVELIEKGK  311 (347)
T ss_pred             CccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecC----CHHHHHHHHHHHHcCc
Confidence            88777888888888765555444322111111111  111     111111111111111    1344555899999999


Q ss_pred             cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          302 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       302 ~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++|.+.+.||++++++|++.+.+++..||+++.+
T Consensus       312 ikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  312 IKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             ccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEe
Confidence            9999999999999999999999999999999864

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.6e-37  Score=284.92  Aligned_cols=310  Identities=32%  Similarity=0.475  Sum_probs=267.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++..++++. +.+.+.+.|.+.+++|+|++.++++|+.|.....|..+.....|.++|+|++|+|+.+|++++.|+
T Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~   79 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK   79 (338)
T ss_pred             CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence            8999999988876 788888999999999999999999999999999887764445578899999999999999999999


Q ss_pred             CCCEEEE------------------ec---------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCA------------------LL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+.                  ++         .+|+|++|+.++.+.++++|+++++++++.++.++++||+++..
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~  159 (338)
T cd08254          80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR  159 (338)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence            9999986                  22         25899999999999999999999999999999999999999988


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                      ...+.+++++||          .| +|.+|.+++++|+.+|++|+++++++++.+.++++|.+.+++.....+.+.+ +.
T Consensus       160 ~~~~~~~~~vli----------~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~  227 (338)
T cd08254         160 AGEVKPGETVLV----------IG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AA  227 (338)
T ss_pred             ccCCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HH
Confidence            888999999999          86 6999999999999999999999999999999999999888887776666666 66


Q ss_pred             hCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  292 (335)
Q Consensus       214 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (335)
                      +.++++|+++||+|. ..+..++++|+++|+++.+|.... ...++...++.++.++.+.+...          ...++.
T Consensus       228 ~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  296 (338)
T cd08254         228 GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGGT----------PEDLPE  296 (338)
T ss_pred             hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEeccCC----------HHHHHH
Confidence            777789999999985 467889999999999999976442 23455666777888888765332          123444


Q ss_pred             HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       293 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+++.++.+++. .+.+++++++++++.+.+++..||+|++|
T Consensus       297 ~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         297 VLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            8888999998876 67899999999999999999999999987

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3e-37  Score=284.35  Aligned_cols=308  Identities=23%  Similarity=0.403  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.   +++++.+.|+| .++||+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++++
T Consensus         1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~   76 (345)
T cd08286           1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNF   76 (345)
T ss_pred             CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCcccc
Confidence            89999987764   89999999886 89999999999999999999998876543 347899999999999999999999


Q ss_pred             CCCCEEEEec----------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHHHH
Q 019790           80 KVGDQVCALL----------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWS  129 (335)
Q Consensus        80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a~~  129 (335)
                      ++||+|+...                            .+|+|++|+.++.+  .++++|++++..+++.++..+++||+
T Consensus        77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  156 (345)
T cd08286          77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE  156 (345)
T ss_pred             CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence            9999998742                            13889999999987  89999999999999999999999999


Q ss_pred             HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHH
Q 019790          130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA  208 (335)
Q Consensus       130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  208 (335)
                      ++....++.+++++||          +| .|.+|.+++|+|+.+| .+|+++.+++++...++++|++.++++...++..
T Consensus       157 ~~~~~~~~~~g~~vlI----------~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~  225 (345)
T cd08286         157 CGVLNGKVKPGDTVAI----------VG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIE  225 (345)
T ss_pred             HHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHH
Confidence            8777788999999999          87 5999999999999999 6999988888888888999999999888777878


Q ss_pred             HHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790          209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS  287 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
                      .+.+.+.+.++|++|||+|. ..+..+++.|+++|+++.+|.... ...+++..++.+++++.+.....           
T Consensus       226 ~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------  293 (345)
T cd08286         226 QVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGLVDT-----------  293 (345)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeecCch-----------
Confidence            88888888889999999986 456788899999999999986543 24566666677888888753321           


Q ss_pred             HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC--CceeEEEeC
Q 019790          288 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ--HIGKIMLVP  335 (335)
Q Consensus       288 ~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~  335 (335)
                      ..++.+.+++.++.+++  ++.++|+++++++|++.+....  ...|++|+|
T Consensus       294 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         294 NTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             hhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            12344778888998865  3578999999999999998763  345999876

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.1e-37  Score=280.67  Aligned_cols=309  Identities=31%  Similarity=0.491  Sum_probs=258.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++...+.+..+++.+.+.|.+.++||+||+.++++|++|++...+..+. ...|.++|||++|+|+++|.  ..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~   77 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFT   77 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCC
Confidence            89999998887777888888888899999999999999999999988876532 23478899999999999995  5799


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSD  154 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~  154 (335)
                      +||+|+++.      .+|+|++|+.++...++++|+++++++++.++.++.+||+++.....+.+++++||         
T Consensus        78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV---------  148 (320)
T cd08243          78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLI---------  148 (320)
T ss_pred             CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEE---------
Confidence            999999885      24899999999999999999999999999999999999999988888999999999         


Q ss_pred             cccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       155 ~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                       +|++|.+|++++++|+++|++|+++++++++.+.++++|++.+++. ..++.+.+++.  ++++|+++||+|+..+...
T Consensus       149 -~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~  224 (320)
T cd08243         149 -RGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDS  224 (320)
T ss_pred             -EcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHH
Confidence             9989999999999999999999999999999999999999887754 44666677776  5689999999999888889


Q ss_pred             hccccCCCEEEEEeccCCCcc--ccChhHH--hhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccccccccc
Q 019790          235 LGSLNIDGRLFIIGTQGGAKT--ELNITSL--FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL  310 (335)
Q Consensus       235 ~~~l~~~G~~v~~g~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  310 (335)
                      +++++++|+++.+|.......  .......  +.+++++.+.......        ...++.+.+++.++.+++.+.+.+
T Consensus       225 ~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~  296 (320)
T cd08243         225 LRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP--------QTPLQELFDFVAAGHLDIPPSKVF  296 (320)
T ss_pred             HHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh--------HHHHHHHHHHHHCCceecccccEE
Confidence            999999999999987543211  1112222  2456666665433211        224455888899999888778899


Q ss_pred             chhhHHHHHHHHHhCCCceeEEE
Q 019790          311 PLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       311 ~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      +++++++|++.+.+++..+|+|+
T Consensus       297 ~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         297 TFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             cHHHHHHHHHHHHhCCCCCcEEe
Confidence            99999999999999888888876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=2.4e-37  Score=284.15  Aligned_cols=304  Identities=26%  Similarity=0.411  Sum_probs=254.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++.+++++  ..+++.+.|.+.++||+||+.++++|++|++.+.|..+..  .|.++|||++|+|+++|++++.|+
T Consensus         1 mka~~~~~~~~~--~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~--~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTG--DVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDK--TGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCC--ceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCC--CCccCCcccceEEEEECCCCccCC
Confidence            999999988764  2378899999999999999999999999999888865432  367899999999999999999999


Q ss_pred             CCCEEEE-----------ec-----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCA-----------LL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|++           ++                 .+|+|++|+.++.+.++++|++++++++++++.+++|||+++ 
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-  155 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-  155 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-
Confidence            9999986           22                 258999999999999999999999999999999999999998 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARV  210 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~  210 (335)
                      ...++++++++||          +| .|++|++++++|+.+ |++|+++++++++++.++++|++.+++++. ..+.+.+
T Consensus       156 ~~~~~~~g~~vlV----------~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v  224 (338)
T PRK09422        156 KVSGIKPGQWIAI----------YG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKII  224 (338)
T ss_pred             HhcCCCCCCEEEE----------EC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHH
Confidence            7788999999999          98 699999999999985 999999999999999999999998888754 5566677


Q ss_pred             HHHhCCCccc-EEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790          211 KEETGGKGVD-VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV  289 (335)
Q Consensus       211 ~~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (335)
                      ++.++  ++| +++++.++..+..++++++++|+++.+|.... ...++...+..+..++.++.....          +.
T Consensus       225 ~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~  291 (338)
T PRK09422        225 QEKTG--GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGTR----------QD  291 (338)
T ss_pred             HHhcC--CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCCH----------HH
Confidence            77665  588 55566666778889999999999999986543 234455556667788876543221          12


Q ss_pred             HHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          290 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       290 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ++.+++++.+|.+.+.+. .++++++++|++.+.+++..||+++.
T Consensus       292 ~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~  335 (338)
T PRK09422        292 LEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID  335 (338)
T ss_pred             HHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence            344888899998877654 58999999999999999999999885

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=7.4e-38  Score=287.68  Aligned_cols=313  Identities=29%  Similarity=0.396  Sum_probs=257.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++ +..+++++.+.|++.++||+||+.++++|++|++...+..  ....|.++|+|++|+|+.+|++++.|+
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~   77 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVVEVGSGVTRFK   77 (339)
T ss_pred             CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEEEeCCCcCcCC
Confidence            9999999887 6779999999999999999999999999999998876654  112367899999999999999999999


Q ss_pred             CCCEEEEecC--------CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC----------CCCCE
Q 019790           81 VGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----------SPGES  142 (335)
Q Consensus        81 ~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~----------~~~~~  142 (335)
                      +||+|+++..        +|+|++|+.++.+.++++|+++++++++.++.++.+||+++....++          .++++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~  157 (339)
T cd08249          78 VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKP  157 (339)
T ss_pred             CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCE
Confidence            9999999864        48999999999999999999999999999999999999998766554          78999


Q ss_pred             EEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEE
Q 019790          143 FLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI  222 (335)
Q Consensus       143 vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v  222 (335)
                      ++|          +|++|.+|++++++|+.+|++|++++ ++++.+.++++|++.++++....+.+.+++.++ +++|++
T Consensus       158 vlI----------~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~v  225 (339)
T cd08249         158 VLI----------WGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYA  225 (339)
T ss_pred             EEE----------EcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEE
Confidence            999          99889999999999999999999888 568888888999999999888888888877766 579999


Q ss_pred             EeCCCh-hhHHHhhccccC--CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccch--hhHHHHHHHHHHHHHHHH
Q 019790          223 LDCMGA-SYFQRNLGSLNI--DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAI  297 (335)
Q Consensus       223 id~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  297 (335)
                      +|++|+ ..+..+++++++  +|+++.+|...... .      ...+.+...........  ..........++.+.+++
T Consensus       226 l~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (339)
T cd08249         226 LDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-E------PRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELL  298 (339)
T ss_pred             EEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-c------CCCCceEEEEEeeeecccccccccchHHHHHHHHHHH
Confidence            999998 778899999999  99999998654332 0      11222222222111100  001112234555688899


Q ss_pred             HCCccccccccccc--hhhHHHHHHHHHhCC-CceeEEEeC
Q 019790          298 AVGKVKPVIYKYLP--LCEAAEAHQLMESSQ-HIGKIMLVP  335 (335)
Q Consensus       298 ~~g~~~~~~~~~~~--l~~~~~a~~~~~~~~-~~gkvvi~~  335 (335)
                      .++.+.+.....++  ++++++|++.+.+++ ..+|+|++.
T Consensus       299 ~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         299 EEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            99998877666777  999999999999988 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.1e-37  Score=282.11  Aligned_cols=315  Identities=40%  Similarity=0.644  Sum_probs=271.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++...+.+..+++.+.+.|++.+++|+|++.++++|.+|++.+.|..+....+|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            89999987777777899988888899999999999999999999998886654345578899999999999999999999


Q ss_pred             CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|++..                           ..|++++|+.++.+.++++|+++++++++.++.+..+||+++.+
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~  160 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT  160 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence            999998762                           24789999999999999999999999999999999999999888


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                      ..++.++++++|          +|+.+.+|.+++++++..|++|+++++++++.+.++..+.+.+++..+..+...+.+.
T Consensus       161 ~~~~~~~~~vlI----------~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (342)
T cd08266         161 RARLRPGETVLV----------HGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVREL  230 (342)
T ss_pred             hcCCCCCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHH
Confidence            889999999999          9988999999999999999999999999999888888888777877776777777777


Q ss_pred             hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  293 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (335)
                      +.++++|++++++|...+...++.++++|+++.+|........++....+.+++++.+......          ..+..+
T Consensus       231 ~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  300 (342)
T cd08266         231 TGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTK----------AELDEA  300 (342)
T ss_pred             hCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCH----------HHHHHH
Confidence            7777899999999998888899999999999999876554334555455677888877655321          133447


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+++.++.+++.+.+.|+++++++|++.+.++...+|+++++
T Consensus       301 ~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         301 LRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             HHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            788999988888888999999999999999888889999875

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=284.93  Aligned_cols=305  Identities=32%  Similarity=0.471  Sum_probs=257.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.+.|.+.++||+||+.++++|++|++...|..+. ..+|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEEEeCCCCccCC
Confidence            899999988764  899999999999999999999999999999988886643 23477899999999999999998899


Q ss_pred             CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+++.                           ..|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++..
T Consensus        78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~  157 (334)
T PRK13771         78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRR  157 (334)
T ss_pred             CCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHh
Confidence            999999863                           15889999999999999999999999999999999999999866


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                      . .+.++++++|          +|+.|.+|++++++|+.+|++|+++++++++.+.++++ ++.+++..  .+.+.+.+.
T Consensus       158 ~-~~~~~~~vlI----------~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~  223 (334)
T PRK13771        158 A-GVKKGETVLV----------TGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI  223 (334)
T ss_pred             c-CCCCCCEEEE----------ECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc
Confidence            5 8999999999          99889999999999999999999999999999888877 66666554  455555554


Q ss_pred             hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc-ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  292 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (335)
                       +  ++|+++||+|+......+++++++|+++.+|....... .......+.+++++.+.....          .+.++.
T Consensus       224 -~--~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  290 (334)
T PRK13771        224 -G--GADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISAT----------KRDVEE  290 (334)
T ss_pred             -C--CCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCC----------HHHHHH
Confidence             2  69999999999888889999999999999997654321 233444456788887763211          123445


Q ss_pred             HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       293 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++++.++.+++.+.+.|+++++++|++.+++++..||+++.+
T Consensus       291 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        291 ALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence            8889999999887889999999999999999888889999865

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=5.5e-37  Score=282.29  Aligned_cols=306  Identities=31%  Similarity=0.455  Sum_probs=258.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+.+++++.   +.+++.+.|++.+++|+||+.++++|+.|+..+.|.++ +...|.++|+|++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~   76 (343)
T cd08235           1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFK   76 (343)
T ss_pred             CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCC
Confidence            89999988763   88999999999999999999999999999999888664 233477899999999999999999999


Q ss_pred             CCCEEEEec---------------------------CCcceeeEEEecCCc-----eEeCCCCCChhhhccCcchHHHHH
Q 019790           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQ-----VLPVPSGVSLKDAAAFPEVACTVW  128 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~~~~~~~~a~  128 (335)
                      +||+|+++.                           ..|+|++|+.++.+.     ++++|+++++.+++.+ .++.+||
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~  155 (343)
T cd08235          77 VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCI  155 (343)
T ss_pred             CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHH
Confidence            999999862                           358999999999998     9999999999999865 7889999


Q ss_pred             HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790          129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFV  207 (335)
Q Consensus       129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  207 (335)
                      +++.. .+++++++|||          +| +|.+|.+++++|+..|++ |+++++++++.+.+++++.+.++++++..+.
T Consensus       156 ~~l~~-~~~~~g~~VlV----------~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~  223 (343)
T cd08235         156 NAQRK-AGIKPGDTVLV----------IG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLV  223 (343)
T ss_pred             HHHHh-cCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHH
Confidence            99954 58999999999          96 799999999999999998 9889889999999888999999998888888


Q ss_pred             HHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790          208 ARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALI  285 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (335)
                      +.+.+.+.++++|+++||+++. .+...+++++++|+++.+|..... ...++......+++.+.+......        
T Consensus       224 ~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------  295 (343)
T cd08235         224 EKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASP--------  295 (343)
T ss_pred             HHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCCh--------
Confidence            8888888888899999999965 678889999999999999865432 233445556667777776543321        


Q ss_pred             HHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          286 VSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       286 ~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                        +.++.+++++.++.+++  .+...|+++++++|++.+.+++ .+|+|+.
T Consensus       296 --~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         296 --EDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             --hhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence              12344788999998863  4567899999999999999988 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=6e-37  Score=282.14  Aligned_cols=306  Identities=29%  Similarity=0.446  Sum_probs=257.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~-~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++   .+++++.+.|.|. ++||+|++.++++|+.|++...|.++.  ..|.++|+|++|+|+++|++++++
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~   75 (344)
T cd08284           1 MKAVVFKGPG---DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTL   75 (344)
T ss_pred             CeeEEEecCC---CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCcccc
Confidence            8999998654   4899999999885 999999999999999999988886542  346789999999999999999999


Q ss_pred             CCCCEEEEec-------------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHH
Q 019790           80 KVGDQVCALL-------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        80 ~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~  126 (335)
                      ++||+|+++.                               .+|+|++|+.++.+  .++++|++++++++++++.+++|
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~t  155 (344)
T cd08284          76 KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPT  155 (344)
T ss_pred             CCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHH
Confidence            9999999753                               14889999999875  99999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      ||+++. ...+.++++|||          +| +|.+|++++++|+.+|+ +|+++++++++.+.++++|+. .++.+..+
T Consensus       156 a~~~~~-~~~~~~~~~vlI----------~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~  222 (344)
T cd08284         156 GYFGAK-RAQVRPGDTVAV----------IG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAE  222 (344)
T ss_pred             HHhhhH-hcCCccCCEEEE----------EC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcC
Confidence            999995 478899999999          96 79999999999999997 899998888888888899975 46666677


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHH
Q 019790          206 FVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL  284 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (335)
                      +...+.+.+.++++|++|||+++ ..+..++++++++|+++.+|..............+.+++++.+....         
T Consensus       223 ~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  293 (344)
T cd08284         223 PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCP---------  293 (344)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCC---------
Confidence            88888888887889999999996 45788899999999999998765443344555567778887754211         


Q ss_pred             HHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          285 IVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       285 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                       ....++.+++++.++.+++  ++.+++++++++++++.+.+++. +|+|++|
T Consensus       294 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~  344 (344)
T cd08284         294 -VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP  344 (344)
T ss_pred             -cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence             1233455888999998875  46788999999999999988877 9999875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.5e-37  Score=278.55  Aligned_cols=318  Identities=32%  Similarity=0.512  Sum_probs=269.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+..+++++.+.|++.+++|+|++.++++|++|+....+........|.++|||++|+|+.+|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            89999999888877899998888899999999999999999999988876554344578899999999999999999999


Q ss_pred             CCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      +||+|+++.     ..|+|++|+.++.+.++++|+++++.+++.++....+||+++.+..++.++++++|          
T Consensus        81 ~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli----------  150 (326)
T cd08272          81 VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLI----------  150 (326)
T ss_pred             CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE----------
Confidence            999999885     25889999999999999999999999999999999999999888899999999999          


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +|+.+.+|++++++++.+|++|++++++ ++.+.++++|.+.+++.... +...+.+.+.++++|+++||+++......+
T Consensus       151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~  228 (326)
T cd08272         151 HGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASF  228 (326)
T ss_pred             EcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHH
Confidence            9989999999999999999999999988 88888888999888887766 778888888888899999999998788899


Q ss_pred             ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecccc-chhhHHHHHHHHHHHHHHHHHCCccccccc-cccchh
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR-STENKALIVSEVEKNVWPAIAVGKVKPVIY-KYLPLC  313 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~l~  313 (335)
                      ++++++|+++.+|...    +........+++++.+..+... ............++.+.+++.++.+++.+. +.|+++
T Consensus       229 ~~l~~~g~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  304 (326)
T cd08272         229 EAVALYGRVVSILGGA----THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLE  304 (326)
T ss_pred             HHhccCCEEEEEecCC----ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHH
Confidence            9999999999998653    2222233467777777664321 000111223445666888999999887755 899999


Q ss_pred             hHHHHHHHHHhCCCceeEEEe
Q 019790          314 EAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       314 ~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +++++++.+.+++..+|++++
T Consensus       305 ~~~~~~~~~~~~~~~~~vv~~  325 (326)
T cd08272         305 EAAAAHARLESGSARGKIVID  325 (326)
T ss_pred             HHHHHHHHHHcCCcccEEEEE
Confidence            999999999988888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.6e-37  Score=281.17  Aligned_cols=305  Identities=34%  Similarity=0.483  Sum_probs=257.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.  .+.+++.|.|.+.+++|+|++.++++|++|++...|..+. ...|.++|+|++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~   77 (332)
T cd08259           1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVEEVGEGVERFK   77 (332)
T ss_pred             CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEEEECCCCccCC
Confidence            89999987433  4899999999999999999999999999999998887653 34578999999999999999999999


Q ss_pred             CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+++.                           ..|+|++|+.++...++++|+++++++++.++.++.+||+++..
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~  157 (332)
T cd08259          78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR  157 (332)
T ss_pred             CCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence            999999874                           15899999999999999999999999999999999999999966


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                       .++.+++++||          +|++|.+|++++++++..|++|+++++++++.+.+++++.+.+++..+  +.+.+.+.
T Consensus       158 -~~~~~~~~vlI----------~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  224 (332)
T cd08259         158 -AGVKKGDTVLV----------TGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKL  224 (332)
T ss_pred             -hCCCCCCEEEE----------ECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhc
Confidence             88999999999          999999999999999999999999999999888888888877776544  55555554


Q ss_pred             hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  293 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (335)
                      .   ++|++++|+|......++++++++|+++.+|........+.......++.++.+....  .        ...++.+
T Consensus       225 ~---~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~  291 (332)
T cd08259         225 G---GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA--T--------KADVEEA  291 (332)
T ss_pred             c---CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC--C--------HHHHHHH
Confidence            3   6999999999988888999999999999998765432223444444567776665311  1        1234448


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .+++.+|.+++.+.++|+++++++|++.+.+++..||++++
T Consensus       292 ~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         292 LKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence            88899999988888899999999999999998888999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=7.7e-37  Score=284.19  Aligned_cols=309  Identities=26%  Similarity=0.351  Sum_probs=250.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||.++..++++  +++++.|.|++.++||+||+.++++|++|++.+.|..+  ..+|.++|||++|+|+++|++++.|+
T Consensus         8 ~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (373)
T cd08299           8 CKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVESVGEGVTTVK   83 (373)
T ss_pred             eEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEEEeCCCCccCC
Confidence            688888876654  89999999999999999999999999999999988753  23588999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|+.+.                                                ..|+|++|++++.+.++++|+++
T Consensus        84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            999998751                                                14789999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++++++++++.+||+++....++++++++||          +| .|++|++++++|+.+|+ +|+++++++++++.++
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV----------~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~  232 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAV----------FG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK  232 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            999999999999999999878889999999999          95 79999999999999999 8999999999999999


Q ss_pred             HcCCCEEEeCCCcc--HHHHHHHHhCCCcccEEEeCCCh-hhHHHhhcc-ccCCCEEEEEeccCCC-ccccChhHHhhcc
Q 019790          192 DLGADVCINYKTED--FVARVKEETGGKGVDVILDCMGA-SYFQRNLGS-LNIDGRLFIIGTQGGA-KTELNITSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~-l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~  266 (335)
                      ++|++.+++..+..  +...+.+.++ +++|+++||+|+ ..+..++.. ++++|+++.+|..... ..+++.. .+.++
T Consensus       233 ~lGa~~~i~~~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~  310 (373)
T cd08299         233 ELGATECINPQDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTG  310 (373)
T ss_pred             HcCCceEecccccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcC
Confidence            99999988876533  6667777776 479999999996 445665555 4679999999976532 2233332 23467


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      .++.+++.......+.       +..+++.+.++.  +.+.+.+.|+++++++|++.+.+++. .|+++.
T Consensus       311 ~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~  372 (373)
T cd08299         311 RTWKGAVFGGWKSKDS-------VPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLT  372 (373)
T ss_pred             CeEEEEEecCCccHHH-------HHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEe
Confidence            7888877654432111       111445555554  44567899999999999999987765 477775

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=9.5e-37  Score=278.42  Aligned_cols=315  Identities=20%  Similarity=0.308  Sum_probs=258.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.+|+++.+++++.|.|+++++||+||+.++++|++|+....|..+....+|.++|||++|+|++  +++++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            99999999888778999999999999999999999999999999988886543334578899999999998  6777899


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH--HhcCCC-CCCEEEEeecccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLS-PGESFLVDFCSIS  151 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~--~~~~~~-~~~~vli~~~~~~  151 (335)
                      +||+|+++.      ..|+|++|+.++.+.++++|+++++++++.++..+++++.++.  ...... ++++++|      
T Consensus        79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI------  152 (324)
T cd08288          79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLV------  152 (324)
T ss_pred             CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEE------
Confidence            999999863      2589999999999999999999999999999999999987764  123445 6789999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                          +|++|.+|++++++|+.+|++|++++.++++.+.++++|++.++++.+...  .++..+.+ ++|.++|++++...
T Consensus       153 ----~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~~  225 (324)
T cd08288         153 ----TGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHTL  225 (324)
T ss_pred             ----ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHHH
Confidence                998899999999999999999999999999999999999999888765332  44555443 58999999998667


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ...+..++.+|+++.+|.........+...++.+++++.+.........    ...+.++.+.+++.++.+.+ +.+.++
T Consensus       226 ~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-i~~~~~  300 (324)
T cd08288         226 ANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIE----RRRAAWARLARDLDPALLEA-LTREIP  300 (324)
T ss_pred             HHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccch----hhHHHHHHHHHHHhcCCccc-cceeec
Confidence            7788888999999999876432223444555578899888764432211    12345555778888888876 468999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+++++..+|+++++
T Consensus       301 ~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         301 LADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HHHHHHHHHHHhcCCccCeEEEeC
Confidence            999999999999999999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=6e-37  Score=281.12  Aligned_cols=318  Identities=31%  Similarity=0.400  Sum_probs=264.2

Q ss_pred             CEEEEEcCCCCCc---ceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~~---~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||++++.++++.   .+++++.+.|++.+++|+||+.++++|++|++...+..+. ...|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~   79 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT   79 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence            8999999998875   4888888989999999999999999999999988776542 23477899999999999999999


Q ss_pred             CCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC-----CCEEEEeecc
Q 019790           78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVDFCS  149 (335)
Q Consensus        78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~-----~~~vli~~~~  149 (335)
                      .|++||+|+.+.   ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++.+...+.+     +++++|    
T Consensus        80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV----  155 (336)
T cd08252          80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLI----  155 (336)
T ss_pred             CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEE----
Confidence            999999999864   46899999999999999999999999999999999999999878788887     999999    


Q ss_pred             ccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          150 ISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       150 ~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                            +|+.|.+|++++++|+.+| ++|+++++++++.+.++++|++.+++... .+...+... .++++|++|||+|+
T Consensus       156 ------~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~-~~~~~d~vl~~~~~  227 (336)
T cd08252         156 ------IGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEAL-GIEPVDYIFCLTDT  227 (336)
T ss_pred             ------EcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhh-CCCCCCEEEEccCc
Confidence                  9989999999999999999 99999999999999999999988888764 566666543 44689999999995


Q ss_pred             -hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccch--hhHHHHHHHHHHHHHHHHHCCccccc
Q 019790          229 -SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAIAVGKVKPV  305 (335)
Q Consensus       229 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~  305 (335)
                       ..+..++++++++|+++.+|...   ..++...+..+++++.+..+.....  ..........++.+.+++.+|.+++.
T Consensus       228 ~~~~~~~~~~l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (336)
T cd08252         228 DQHWDAMAELIAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT  304 (336)
T ss_pred             HHHHHHHHHHhcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence             56788999999999999998642   3445555556788888765542111  11111233456668899999998875


Q ss_pred             cc---cccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          306 IY---KYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       306 ~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +.   +.++++++++|++.+.++...+|++++
T Consensus       305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         305 LTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            32   457999999999999999988898874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.7e-37  Score=282.15  Aligned_cols=305  Identities=26%  Similarity=0.372  Sum_probs=254.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--------CCCCCCCCCCceEEEEEEe
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--------PKGASPYPGLECSGTILSV   72 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--------~~~~p~~~G~e~~G~V~~v   72 (335)
                      |||+++..++.   +++++.+.|++.+++|+||+.++++|++|++.+.|....        ....|.++|+|++|+|+++
T Consensus         1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v   77 (350)
T cd08256           1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL   77 (350)
T ss_pred             CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence            99999987654   899999999999999999999999999999988875311        0135778999999999999


Q ss_pred             cCCCC--CCCCCCEEEE---------------------------ec--CCcceeeEEEecCC-ceEeCCCCCChhhhccC
Q 019790           73 GKNVS--RWKVGDQVCA---------------------------LL--GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF  120 (335)
Q Consensus        73 G~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~  120 (335)
                      |++++  .|++||+|++                           +.  ..|+|++|+.++.+ .++++|+++++++++.+
T Consensus        78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~  157 (350)
T cd08256          78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI  157 (350)
T ss_pred             CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence            99998  8999999987                           31  35899999999988 57899999999999988


Q ss_pred             cchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEE
Q 019790          121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       121 ~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                       .++.++|+++ +..+++++++|+|          .| .|.+|.+++++|+++|++ ++++++++++.+.++++|++.++
T Consensus       158 -~~~~ta~~a~-~~~~~~~g~~vlI----------~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~  224 (350)
T cd08256         158 -EPLACALHAV-DRANIKFDDVVVL----------AG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL  224 (350)
T ss_pred             -hHHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence             8999999998 7789999999999          66 699999999999999985 67778888888888899999998


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHH-hhcceEEEEeecccc
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAAGLRSR  277 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  277 (335)
                      ++....+.+.+.+.+++.++|++|||+|+ ..+..++++++++|+++.+|..... ..++...+ ..+++++.++.....
T Consensus       225 ~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~  303 (350)
T cd08256         225 NPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP-VTVDWSIIGDRKELDVLGSHLGPY  303 (350)
T ss_pred             cCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC-CccChhHhhcccccEEEEeccCch
Confidence            88877888888888888889999999995 4577889999999999999865432 23444333 346677777654321


Q ss_pred             chhhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          278 STENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                                 .++.+++++.+|.+++.  +.+.|+++++++|++.+++++..+|+++
T Consensus       304 -----------~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         304 -----------CYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             -----------hHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence                       23347888999998873  6789999999999999999888888874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-36  Score=275.56  Aligned_cols=323  Identities=35%  Similarity=0.529  Sum_probs=275.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++...+.+..+++.+.+.|.+.+++|+|++.++++|+.|+....+.......+|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            89999998877778899888888899999999999999999999888776544334577899999999999999999999


Q ss_pred             CCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      +||+|+++.     ..|++++|+.++.+.++++|+++++++++.++.+..++|+++.....+.++++++|          
T Consensus        81 ~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli----------  150 (328)
T cd08268          81 VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI----------  150 (328)
T ss_pred             CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE----------
Confidence            999999875     34889999999999999999999999999999999999999988888999999999          


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +|+++.+|.+++++++..|++++++++++++.+.++++|.+.+++.....+...+.+.+.+.++|++++|+++.....++
T Consensus       151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~  230 (328)
T cd08268         151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLA  230 (328)
T ss_pred             ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHH
Confidence            99899999999999999999999999999999888888988888887777777788888777899999999998788889


Q ss_pred             ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA  315 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~  315 (335)
                      ++++++|+++.+|........++....+.+++++.+..+....  .........++.+.+++.++.+.+.....|+++++
T Consensus       231 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (328)
T cd08268         231 DALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDI  308 (328)
T ss_pred             HhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHH
Confidence            9999999999998665432334444356788888877654322  11123344556677778888888777788999999


Q ss_pred             HHHHHHHHhCCCceeEEEeC
Q 019790          316 AEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       316 ~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++++.+.+++..+|++++|
T Consensus       309 ~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         309 VEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HHHHHHHHcCCCCceEEEeC
Confidence            99999999888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.2e-36  Score=282.21  Aligned_cols=307  Identities=25%  Similarity=0.370  Sum_probs=257.3

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+++.+.+.+  +++++.+.|.+.+++|+||+.++++|++|++.+.+..+.  ..|.++|||++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCC
Confidence            67888876654  899999999999999999999999999999998886542  34789999999999999999999999


Q ss_pred             CCEEEEecC------------------------------------------------CcceeeEEEecCCceEeCCCCCC
Q 019790           82 GDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGVS  113 (335)
Q Consensus        82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~  113 (335)
                      ||+|++...                                                .|+|++|+.++.+.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            999987521                                                26899999999999999999999


Q ss_pred             hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHH
Q 019790          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKD  192 (335)
Q Consensus       114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~  192 (335)
                      +++++.++.++.+||+++....++.+++++||          +| .|++|++++++|+.+|++ |+++++++++.+.+++
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI----------~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~  226 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAV----------FG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ  226 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999888889999999999          96 799999999999999995 7777779999999999


Q ss_pred             cCCCEEEeCCCc--cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhcccc-CCCEEEEEeccC-CCccccChhHHhhcce
Q 019790          193 LGADVCINYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN-IDGRLFIIGTQG-GAKTELNITSLFAKRL  267 (335)
Q Consensus       193 ~g~~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~~~~  267 (335)
                      +|++.+++....  ++.+.+++.++ +++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .++.
T Consensus       227 ~g~~~~v~~~~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~  304 (365)
T cd05279         227 LGATECINPRDQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGR  304 (365)
T ss_pred             hCCCeecccccccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCC
Confidence            999988887766  67777888775 689999999986 56788899999 999999998754 22345666666 5777


Q ss_pred             EEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ++.|.+...+...       +.+..+.+++.++.+.+  .+.++|+++++++|++.+++++.. |+++
T Consensus       305 ~l~g~~~~~~~~~-------~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~  364 (365)
T cd05279         305 TIKGTVFGGWKSK-------DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL  364 (365)
T ss_pred             eEEEEeccCCchH-------hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence            8887765544321       22344788899998765  468899999999999999877654 6665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6.5e-37  Score=281.21  Aligned_cols=301  Identities=25%  Similarity=0.355  Sum_probs=254.4

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      |+++.+.++  ..+++++.+.|++.++||+||+.++++|++|++.+.|.... ..+|.++|||++|+|+++|++++.|++
T Consensus         1 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~   77 (337)
T cd05283           1 KGYAARDAS--GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKV   77 (337)
T ss_pred             CceEEecCC--CCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCC
Confidence            567777666  45999999999999999999999999999999999887643 345889999999999999999999999


Q ss_pred             CCEEEEe-----------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHH
Q 019790           82 GDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~  126 (335)
                      ||+|+..                                   ...|+|++|+.++.+.++++|+++++++++.+.+.+.+
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t  157 (337)
T cd05283          78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT  157 (337)
T ss_pred             CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence            9999731                                   23589999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          127 VWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       127 a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      ||+++.. ..+.++++++|          .| .|.+|++++++|+.+|++|+++++++++.+.++++|++.+++....++
T Consensus       158 a~~~~~~-~~~~~g~~vlV----------~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  225 (337)
T cd05283         158 VYSPLKR-NGVGPGKRVGV----------VG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEA  225 (337)
T ss_pred             HHHHHHh-cCCCCCCEEEE----------EC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhh
Confidence            9999855 45899999999          87 799999999999999999999999999999999999988887665433


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790          207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI  285 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (335)
                      ...    . ++++|++|||+|+.. +..++++++++|+++.+|..... ..+++..++.+++++.+......        
T Consensus       226 ~~~----~-~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--------  291 (337)
T cd05283         226 MKK----A-AGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP-LPVPPFPLIFGRKSVAGSLIGGR--------  291 (337)
T ss_pred             hhh----c-cCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC-CccCHHHHhcCceEEEEecccCH--------
Confidence            221    1 357999999999874 78889999999999999876543 25566676778999998766421        


Q ss_pred             HHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          286 VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       286 ~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                        +.++.+++++.++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus       292 --~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         292 --KETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             --HHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence              1234477888899988765 789999999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=2e-36  Score=278.55  Aligned_cols=309  Identities=32%  Similarity=0.482  Sum_probs=257.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.++.   +.+++.+.|++.++||+||+.++++|++|+....+...  ...|.++|+|++|+|+.+|++++.|+
T Consensus         1 ~~a~~~~~~~~---l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~--~~~~~~~g~~~~G~V~~~g~~v~~~~   75 (343)
T cd08236           1 MKALVLTGPGD---LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA--YHPPLVLGHEFSGTVEEVGSGVDDLA   75 (343)
T ss_pred             CeeEEEecCCc---eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC--CCCCcccCcceEEEEEEECCCCCcCC
Confidence            89999998753   88999999999999999999999999999998877652  23477899999999999999999999


Q ss_pred             CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+++.                           ..|+|++|+.++.+.++++|+++++++++++ ...++||+++. 
T Consensus        76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-  153 (343)
T cd08236          76 VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-  153 (343)
T ss_pred             CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-
Confidence            999999862                           3589999999999999999999999999877 67889999985 


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      ...+.++++|||          +| .|.+|.+++++|+.+|++ |+++++++++.+.++++|.+.+++++... ...+.+
T Consensus       154 ~~~~~~~~~vlI----------~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~  221 (343)
T cd08236         154 LAGITLGDTVVV----------IG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRE  221 (343)
T ss_pred             hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHH
Confidence            778999999999          96 699999999999999997 99999999999988889998888887766 777888


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCc--cccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV  289 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (335)
                      .++++++|+++||+|+ ..+..++++|+++|+++.+|......  ...+...++.+++++.++........     ..+.
T Consensus       222 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  296 (343)
T cd08236         222 LTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF-----PGDE  296 (343)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc-----chhh
Confidence            8887789999999986 45788899999999999998654321  12234455678888888766432211     1223


Q ss_pred             HHHHHHHHHCCccc--cccccccchhhHHHHHHHHHh-CCCceeEEE
Q 019790          290 EKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMES-SQHIGKIML  333 (335)
Q Consensus       290 ~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvi  333 (335)
                      ++.+.+++.++.+.  +.+.+.+++++++++++.+.+ ....||+|+
T Consensus       297 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         297 WRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             HHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            45578889999875  446788999999999999998 667788874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=7.7e-37  Score=261.10  Aligned_cols=303  Identities=23%  Similarity=0.269  Sum_probs=252.0

Q ss_pred             CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEec--CCCCCCCCCCEEEEec
Q 019790           12 PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG--KNVSRWKVGDQVCALL   89 (335)
Q Consensus        12 ~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG--~~~~~~~~Gd~V~~~~   89 (335)
                      ++.+++++.+.|.|++||||+|+.|.+++|.-.-.+.....  .-.|+-+|...+|.++...  ++...|++||.|.+. 
T Consensus        24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~S--Y~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-  100 (340)
T COG2130          24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPS--YAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-  100 (340)
T ss_pred             CCCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcc--cCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-
Confidence            36699999999999999999999999999833322222111  1226667766655444322  456789999999998 


Q ss_pred             CCcceeeEEEecCCceEeCCCCCChh--hhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHH
Q 019790           90 GGGGYAEKVAVPAGQVLPVPSGVSLK--DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAI  167 (335)
Q Consensus        90 ~~g~~~~~~~~~~~~~~~~p~~~~~~--~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~  167 (335)
                        .+|++|..++.+.+.++++..-+.  .-..+.++..|||.+|.+.+..++|++++|          .+++|++|..+.
T Consensus       101 --~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvV----------SaAaGaVGsvvg  168 (340)
T COG2130         101 --SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVV----------SAAAGAVGSVVG  168 (340)
T ss_pred             --ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEE----------EecccccchHHH
Confidence              579999999999999997653222  223588999999999999999999999999          999999999999


Q ss_pred             HHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEE
Q 019790          168 QMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       168 ~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~  246 (335)
                      |+||..|++|+.++.++++.+++.+ +|++.++||++.++.+.+++... +++|+.|||+|++.+...+..|+..+|+++
T Consensus       169 QiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~  247 (340)
T COG2130         169 QIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLLNLFARIPV  247 (340)
T ss_pred             HHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhhccccceee
Confidence            9999999999999999999999987 99999999999999999999887 589999999999999999999999999999


Q ss_pred             EeccCCCccc------cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790          247 IGTQGGAKTE------LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ  320 (335)
Q Consensus       247 ~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~  320 (335)
                      +|.....+.+      -.+..++.+++++.|+.......    ....+..+++..|+++|+++...+.+-+|+++++||.
T Consensus       248 CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~----~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~  323 (340)
T COG2130         248 CGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD----QRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFI  323 (340)
T ss_pred             eeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh----hhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHH
Confidence            9988765322      23556677899999998743322    2234566669999999999988888888999999999


Q ss_pred             HHHhCCCceeEEEe
Q 019790          321 LMESSQHIGKIMLV  334 (335)
Q Consensus       321 ~~~~~~~~gkvvi~  334 (335)
                      -|.++++.||.|++
T Consensus       324 gLl~G~N~GK~vvK  337 (340)
T COG2130         324 GLLSGKNFGKLVVK  337 (340)
T ss_pred             HHhcCCccceEEEE
Confidence            99999999999986

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.1e-36  Score=281.70  Aligned_cols=305  Identities=26%  Similarity=0.423  Sum_probs=252.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      ||++++..++   .+++++.+.|.+ +++||+||+.++++|++|++.+.|..+.  ..|.++|||++|+|+++|++++.+
T Consensus         1 m~~~~~~~~~---~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~   75 (375)
T cd08282           1 MKAVVYGGPG---NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESL   75 (375)
T ss_pred             CceEEEecCC---ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcC
Confidence            8999997664   499999999986 7999999999999999999999887652  358899999999999999999999


Q ss_pred             CCCCEEEE-------ec------------------------------CCcceeeEEEecCC--ceEeCCCCCChh---hh
Q 019790           80 KVGDQVCA-------LL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLK---DA  117 (335)
Q Consensus        80 ~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~a  117 (335)
                      ++||+|+.       .|                              .+|+|++|+.++.+  .++++|++++++   ++
T Consensus        76 ~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~  155 (375)
T cd08282          76 KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY  155 (375)
T ss_pred             CCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence            99999986       22                              13889999999976  899999999998   56


Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCC
Q 019790          118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD  196 (335)
Q Consensus       118 a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~  196 (335)
                      +.+..++++||+++ ...++.+|++|+|          .| .|.+|++++|+|+.+|+ +|+++++++++.+.++++|+ 
T Consensus       156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI----------~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-  222 (375)
T cd08282         156 LMLSDIFPTGWHGL-ELAGVQPGDTVAV----------FG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-  222 (375)
T ss_pred             eeecchHHHHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-
Confidence            77889999999999 7789999999999          87 69999999999999998 79998889999999999998 


Q ss_pred             EEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh------------HHHhhccccCCCEEEEEeccCCC-----------
Q 019790          197 VCINYKTEDFVARVKEETGGKGVDVILDCMGASY------------FQRNLGSLNIDGRLFIIGTQGGA-----------  253 (335)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~-----------  253 (335)
                      ..+++.+..+.+.+.+.++ +++|+++||+|+..            +..++++++++|+++.+|.....           
T Consensus       223 ~~v~~~~~~~~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~  301 (375)
T cd08282         223 IPIDFSDGDPVEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQ  301 (375)
T ss_pred             eEeccCcccHHHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccC
Confidence            4567777777778888776 57999999999763            67889999999999888764321           


Q ss_pred             -ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCcee
Q 019790          254 -KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGK  330 (335)
Q Consensus       254 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gk  330 (335)
                       ...++...++.++..+.+.....          ...++.++++++++++++  ++.+.++++++++|++.+.+++ .+|
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k  370 (375)
T cd08282         302 GELSFDFGLLWAKGLSFGTGQAPV----------KKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETK  370 (375)
T ss_pred             ccccccHHHHHhcCcEEEEecCCc----------hhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceE
Confidence             12244555566666665532211          122344788999999886  3789999999999999999888 889


Q ss_pred             EEEeC
Q 019790          331 IMLVP  335 (335)
Q Consensus       331 vvi~~  335 (335)
                      +|+++
T Consensus       371 vvv~~  375 (375)
T cd08282         371 VVIKP  375 (375)
T ss_pred             EEeCC
Confidence            99875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-36  Score=277.04  Aligned_cols=306  Identities=28%  Similarity=0.384  Sum_probs=247.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC----------CCCCCCCCCCCceEEEEE
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------PPKGASPYPGLECSGTIL   70 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V~   70 (335)
                      |||+++..+    .+++++.+.|++.++||+||+.++++|+.|++...|...          ....+|.++|+|++|+|+
T Consensus         1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~   76 (341)
T cd08262           1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV   76 (341)
T ss_pred             CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence            899999865    399999999999999999999999999999998887321          122347889999999999


Q ss_pred             EecCCCCC-CCCCCEEEEec-----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           71 SVGKNVSR-WKVGDQVCALL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        71 ~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      ++|++++. |++||+|+++.                 ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++ 
T Consensus        77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-  154 (341)
T cd08262          77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-  154 (341)
T ss_pred             EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-
Confidence            99999987 99999999872                 35899999999999999999999999887 778888999985 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHH---
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA---  208 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---  208 (335)
                      ...+++++++|||          +| .|.+|.+++|+|+.+|++ ++++.+++++.+.++++|++.+++++.....+   
T Consensus       155 ~~~~~~~g~~VlI----------~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~  223 (341)
T cd08262         155 RRARLTPGEVALV----------IG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA  223 (341)
T ss_pred             HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence            7889999999999          96 699999999999999996 66666788888988999998888876543221   


Q ss_pred             HHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790          209 RVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS  287 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
                      .+...+.++++|++|||+|+. .+..++++++++|+++.+|..... ..+.......+++++.+.....  .        
T Consensus       224 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~--------  292 (341)
T cd08262         224 AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMES-DNIEPALAIRKELTLQFSLGYT--P--------  292 (341)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC-CccCHHHHhhcceEEEEEeccc--H--------
Confidence            344556667899999999984 677889999999999999876432 1233333345667766543221  1        


Q ss_pred             HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          288 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       288 ~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      +.++.+.+++.+|.+.+  .+.+.++++++++|++.+++++..+|+|++
T Consensus       293 ~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         293 EEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            12334788899998875  347899999999999999999989999874

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=6e-36  Score=275.23  Aligned_cols=308  Identities=27%  Similarity=0.346  Sum_probs=250.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      ||++++..++  +.+++.+.|.|+|.++||+||+.++++|++|++++.+...  ....+|.++|||++|+|+++|++++.
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~   78 (341)
T PRK05396          1 MKALVKLKAE--PGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG   78 (341)
T ss_pred             CceEEEecCC--CceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence            8999998876  4499999999999999999999999999999997765321  12235778999999999999999999


Q ss_pred             CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      |++||+|++..                           .+|+|++|+.++.+.++++|+++++++++. ..++.++++++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~  157 (341)
T PRK05396         79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTA  157 (341)
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHH
Confidence            99999998751                           358999999999999999999999988874 45666666655


Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                      ..  ...+|++++|          ++ .|.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++++...+.+.+
T Consensus       158 ~~--~~~~g~~vlV----------~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  224 (341)
T PRK05396        158 LS--FDLVGEDVLI----------TG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVM  224 (341)
T ss_pred             Hc--CCCCCCeEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHH
Confidence            33  3468999999          87 69999999999999999 68888888889999999999999988887888888


Q ss_pred             HHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790          211 KEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV  289 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (335)
                      .+.+.++++|++|||.|+. .+..++++|+++|+++.+|..... .+++...+..+++++.++..... .        ..
T Consensus       225 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~l~~~~~~~~-~--------~~  294 (341)
T PRK05396        225 AELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-MAIDWNKVIFKGLTIKGIYGREM-F--------ET  294 (341)
T ss_pred             HHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-CcccHHHHhhcceEEEEEEccCc-c--------ch
Confidence            8888888999999999864 468889999999999999875532 33445666777888877642211 1        11


Q ss_pred             HHHHHHHHHCC-ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          290 EKNVWPAIAVG-KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       290 ~~~~~~~~~~g-~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +..+.+++.++ ++.+.+.+.++++++++|++.+.+++ .||+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        295 WYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             HHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence            22366788888 45566778999999999999998877 79999864

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=9.1e-36  Score=272.66  Aligned_cols=314  Identities=31%  Similarity=0.508  Sum_probs=256.1

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+++...+.+..+++++.+.|.|.++||+|++.++++|++|+..+.|..+....+|.++|+|++|+|+.+|++++.|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            78999999888889999999999999999999999999999999888876543346889999999999999999999999


Q ss_pred             CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG  161 (335)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~  161 (335)
                      ||+|+++...|+|++|+.++.+.++++|+++++++++.++.++.+||+++....++.++++++|          +|+.|.
T Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI----------~g~~g~  151 (331)
T cd08273          82 GDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLI----------HGASGG  151 (331)
T ss_pred             CCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE----------ECCCcH
Confidence            9999998766899999999999999999999999999999999999999988889999999999          998899


Q ss_pred             HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCC
Q 019790          162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID  241 (335)
Q Consensus       162 ~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~  241 (335)
                      +|++++++|+.+|++|++++. +++.+.++++|+.. ++....++...  .. .++++|++++|+++.....++++++++
T Consensus       152 ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~-~~~~~d~vl~~~~~~~~~~~~~~l~~~  226 (331)
T cd08273         152 VGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--ML-TPGGVDVVFDGVGGESYEESYAALAPG  226 (331)
T ss_pred             HHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hc-cCCCceEEEECCchHHHHHHHHHhcCC
Confidence            999999999999999999997 88888888888654 45554444433  22 335799999999998888899999999


Q ss_pred             CEEEEEeccCCCcc-ccCh--h----------HH--hhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccccc
Q 019790          242 GRLFIIGTQGGAKT-ELNI--T----------SL--FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVI  306 (335)
Q Consensus       242 G~~v~~g~~~~~~~-~~~~--~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  306 (335)
                      |+++.+|....... .+..  .          ..  ..++++.........   ..+....+.++.+++++.+|.+.+.+
T Consensus       227 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~~l~~~~  303 (331)
T cd08273         227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRA---EDPKLFRQDLTELLDLLAKGKIRPKI  303 (331)
T ss_pred             CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcc---cCHHHHHHHHHHHHHHHHCCCccCCc
Confidence            99999987654321 1111  0          01  122333333222111   11122344566688999999998877


Q ss_pred             ccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          307 YKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       307 ~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      .+.+++++++++++.+.+++..||+|+
T Consensus       304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         304 AKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            888999999999999998888889876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.3e-36  Score=271.77  Aligned_cols=288  Identities=24%  Similarity=0.351  Sum_probs=239.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++   .+++++.+.|++.++||+||+.++++|++|+....|..+    .|.++|+|++|+|+++|++   ++
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~   70 (319)
T cd08242           1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---EL   70 (319)
T ss_pred             CeeEEEeCCC---cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CC
Confidence            8999998754   499999999999999999999999999999999888664    3778999999999999987   67


Q ss_pred             CCCEEEE---------------------------e-cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCA---------------------------L-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|.+                           + ..+|+|++|+.++.+.++++|++++.++++.+ .+..++|.++ 
T Consensus        71 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-  148 (319)
T cd08242          71 VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-  148 (319)
T ss_pred             CCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence            9999963                           1 12589999999999999999999999888754 4555666655 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      +..++.+++++||          +| +|.+|.+++|+|+.+|++|++++.++++.+.++++|++.++++...        
T Consensus       149 ~~~~~~~g~~vlV----------~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------  209 (319)
T cd08242         149 EQVPITPGDKVAV----------LG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE--------  209 (319)
T ss_pred             HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc--------
Confidence            7788999999999          96 7999999999999999999999999999999999999887765321        


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                       +.+.++|+++||+|+ ..+..++++++++|+++..+.... ...++...+..++.++.+.....             ++
T Consensus       210 -~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-------------~~  274 (319)
T cd08242         210 -SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSRCGP-------------FA  274 (319)
T ss_pred             -ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-CCccCHHHheecceEEEEEeccc-------------HH
Confidence             355689999999987 457888999999999998765432 34556666677888888765432             22


Q ss_pred             HHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          292 NVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       292 ~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+.+++.++.+  .+.+.+.|+++++++||+.++++. .+|+|++|
T Consensus       275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~  319 (319)
T cd08242         275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP  319 (319)
T ss_pred             HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence            37788899988  456789999999999999998765 58999986

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-35  Score=267.77  Aligned_cols=319  Identities=33%  Similarity=0.541  Sum_probs=262.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++.+++++++.+.|++.+++|+||+.++++|++|+....+..... ..|.++|||++|+|+.+|++++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~   79 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWK   79 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCC
Confidence            999999988743469999999999999999999999999999998877754321 2367899999999999999999999


Q ss_pred             CCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790           81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      +||+|+++.   ..|+|++|+.++.+.++++|++++..+++.+.+++.+|++++.....+.++++++|          +|
T Consensus        80 ~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI----------~g  149 (325)
T cd08271          80 VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILI----------TG  149 (325)
T ss_pred             CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEE----------EC
Confidence            999999885   35899999999999999999999999999999999999999988889999999999          99


Q ss_pred             ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcc
Q 019790          158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS  237 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (335)
                      +.+.+|++++++++..|++|+++. ++++.+.+.++|.+.+++.....+...+++.+.++++|++++|+++......+++
T Consensus       150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~  228 (325)
T cd08271         150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPT  228 (325)
T ss_pred             CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHh
Confidence            889999999999999999999887 6777788888999888887777777888888887889999999998777778999


Q ss_pred             ccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecccc---chhhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790          238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR---STENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE  314 (335)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~  314 (335)
                      ++++|+++.++......   .. ..+.+++.+....+...   ...+......+.+..+++++.++.+.+...+.|++++
T Consensus       229 l~~~G~~v~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  304 (325)
T cd08271         229 LAFNGHLVCIQGRPDAS---PD-PPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQ  304 (325)
T ss_pred             hccCCEEEEEcCCCCCc---ch-hHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHH
Confidence            99999999987543221   11 11223333333322211   1100112344556668889999998877778899999


Q ss_pred             HHHHHHHHHhCCCceeEEEeC
Q 019790          315 AAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       315 ~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.++++.+.++...+|+++++
T Consensus       305 ~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         305 LPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHHHHHHHcCCccceEEEEC
Confidence            999999999888889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=4.3e-35  Score=266.27  Aligned_cols=322  Identities=38%  Similarity=0.616  Sum_probs=271.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~-~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.+..+++.+.+ |.+. +++++|++.++++|++|+..+.|........|.++|+|++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            899999977776778888887 6666 49999999999999999998877654333346689999999999999999999


Q ss_pred             CCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      ++||+|+++...|++++|+.++.+.++++|++++..+++.+..+..+|++++.....+.++++++|          +|++
T Consensus        80 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli----------~g~~  149 (323)
T cd08241          80 KVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLV----------LGAA  149 (323)
T ss_pred             CCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEE----------EcCC
Confidence            999999998746899999999999999999999999999899999999999977888999999999          9988


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      +.+|++++++|+..|++|+++++++++.+.++++|.+.+++....++.+.+.+.+.++++|.+++|+|+.....++++++
T Consensus       150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~  229 (323)
T cd08241         150 GGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLA  229 (323)
T ss_pred             chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhc
Confidence            99999999999999999999999999999998899888888777778888888888788999999999977888999999


Q ss_pred             CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHH
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH  319 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~  319 (335)
                      ++|+++.+|........+.....+.+++++.+..+...... ........++.+++++.++.+.+...+.|+++++++++
T Consensus       230 ~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (323)
T cd08241         230 WGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARR-EPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEAL  308 (323)
T ss_pred             cCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccch-hHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHH
Confidence            99999999865433222334345667888888765543221 12233455666889999999888788899999999999


Q ss_pred             HHHHhCCCceeEEEe
Q 019790          320 QLMESSQHIGKIMLV  334 (335)
Q Consensus       320 ~~~~~~~~~gkvvi~  334 (335)
                      +.+.++...+|++++
T Consensus       309 ~~~~~~~~~~~vvv~  323 (323)
T cd08241         309 RALADRKATGKVVLT  323 (323)
T ss_pred             HHHHhCCCCCcEEeC
Confidence            999988888888863

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.9e-35  Score=272.32  Aligned_cols=306  Identities=29%  Similarity=0.475  Sum_probs=251.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      ||+++++.+++   +++++.+.|.| +++||+||+.++++|++|+..+.|..+.  ..|.++|||++|+|+++|+++..+
T Consensus         1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~   75 (345)
T cd08287           1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSV   75 (345)
T ss_pred             CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCcc
Confidence            89999987653   89999999986 8999999999999999999988886643  347899999999999999999999


Q ss_pred             CCCCEEEE-ec--------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhc-----cCcchHH
Q 019790           80 KVGDQVCA-LL--------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAA-----AFPEVAC  125 (335)
Q Consensus        80 ~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~~~~~~~  125 (335)
                      ++||+|++ +.                          .+|+|++|+.++.+  .++++|++++++.+.     ++...++
T Consensus        76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~  155 (345)
T cd08287          76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG  155 (345)
T ss_pred             CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence            99999986 21                          13889999999975  899999999882221     2336788


Q ss_pred             HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790          126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTE  204 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~  204 (335)
                      +||+++ ...++.++++++|          .| .|.+|++++++|+.+|++ ++++.+++++.+.++++|++.++++...
T Consensus       156 ~a~~~~-~~~~~~~g~~vlI----------~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~  223 (345)
T cd08287         156 TGHHAA-VSAGVRPGSTVVV----------VG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGE  223 (345)
T ss_pred             HHHHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcc
Confidence            999988 4678999999999          87 799999999999999995 7888878888888889999999999888


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      .+.+.+.+.+.+.++|+++||+|+ ..+..++++++++|+++.+|.... ...++....+.+++++.+.....       
T Consensus       224 ~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------  295 (345)
T cd08287         224 EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAPV-------  295 (345)
T ss_pred             cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecCCc-------
Confidence            888888888888889999999986 457889999999999999886553 23455545577888887632211       


Q ss_pred             HHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                         ...++.+++++.++.+++  ++.+.++++++++|++.+.+.+. .|++|+|
T Consensus       296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~~  345 (345)
T cd08287         296 ---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLRP  345 (345)
T ss_pred             ---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeCC
Confidence               123445888999999876  35788999999999999887665 4999876

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=271.20  Aligned_cols=301  Identities=31%  Similarity=0.451  Sum_probs=251.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++   .+++.+.+.|++.++||+||+.++++|+.|+....|..+..  +|.++|+|++|+|+.+|+++++|+
T Consensus         1 ~~a~~~~~~~---~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--~p~~~g~~~~G~v~~vG~~v~~~~   75 (334)
T cd08234           1 MKALVYEGPG---ELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--PPLVPGHEFAGVVVAVGSKVTGFK   75 (334)
T ss_pred             CeeEEecCCC---ceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC--CCcccccceEEEEEEeCCCCCCCC
Confidence            8999998776   38999999999999999999999999999999988876543  578999999999999999999999


Q ss_pred             CCCEEEEe---------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|++.                           ...|+|++|+.++.+.++++|+++++.+++.+ .++.++++++ .
T Consensus        76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~  153 (334)
T cd08234          76 VGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-D  153 (334)
T ss_pred             CCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-H
Confidence            99999861                           13588999999999999999999999998765 7788999998 7


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      ..++++++++||          +| .|.+|.+++++|+.+|++ |+++++++++.+.+++++.+.++++....+...  +
T Consensus       154 ~~~~~~g~~vlI----------~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~  220 (334)
T cd08234         154 LLGIKPGDSVLV----------FG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--K  220 (334)
T ss_pred             hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH--H
Confidence            789999999999          96 699999999999999997 888999999999998899888888776665554  4


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  290 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (335)
                      .+.++++|++|||+|+ ......+++|+++|+++.+|..... ..+++...++.+++++.+.....           ..+
T Consensus       221 ~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~  289 (334)
T cd08234         221 EDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINP-----------YTF  289 (334)
T ss_pred             HhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCH-----------HHH
Confidence            5566789999999985 4567889999999999999865532 23444444555778887764321           124


Q ss_pred             HHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          291 KNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       291 ~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      +.+++++.++++++  .+.++++++++++|++.+.+ +..+|+|+
T Consensus       290 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         290 PRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             HHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence            44888899998864  35788999999999999998 77889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=272.25  Aligned_cols=302  Identities=27%  Similarity=0.408  Sum_probs=247.8

Q ss_pred             EEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC-CC-CCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PP-PKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         4 ~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~-~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      +++..++   .+++++.+.|.+.++||+||+.++++|+.|++.+.+.. .. ....|.++|+|++|+|+++|+++++|++
T Consensus         2 ~~~~~~~---~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~   78 (343)
T cd05285           2 AVLHGPG---DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV   78 (343)
T ss_pred             ceEecCC---ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC
Confidence            4455543   48999999999999999999999999999998764321 11 1124678999999999999999999999


Q ss_pred             CCEEEE------------------------ec----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           82 GDQVCA------------------------LL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        82 Gd~V~~------------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      ||+|++                        +.    ..|+|++|+.++++.++++|+++++++++.+ .++.+||+++ .
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~  156 (343)
T cd05285          79 GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R  156 (343)
T ss_pred             CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence            999986                        21    2589999999999999999999999999866 6788999987 7


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccH---HHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF---VAR  209 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~  209 (335)
                      ..++++++++||          +| .|.+|++++++|+.+|++ |+++++++++.+.++++|++.+++++...+   .+.
T Consensus       157 ~~~~~~g~~vlI----------~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~  225 (343)
T cd05285         157 RAGVRPGDTVLV----------FG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEK  225 (343)
T ss_pred             hcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHH
Confidence            889999999999          87 689999999999999997 899988999999999999999998877664   777


Q ss_pred             HHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790          210 VKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSE  288 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (335)
                      +.+.++++++|++|||+|+. .+...+++++++|+++.+|..... ..+++.....+++++.+.....           +
T Consensus       226 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~  293 (343)
T cd05285         226 IAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRYA-----------N  293 (343)
T ss_pred             HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccCh-----------H
Confidence            88888888899999999986 678889999999999999865432 3445555666777777654322           2


Q ss_pred             HHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCC-CceeEEE
Q 019790          289 VEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQ-HIGKIML  333 (335)
Q Consensus       289 ~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi  333 (335)
                      .++.+++++.++.+.  +.+.++|+++++.+|++.+.+++ ..+|++|
T Consensus       294 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         294 TYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             HHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            234478889999865  44678899999999999998875 4589987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-35  Score=271.84  Aligned_cols=297  Identities=31%  Similarity=0.482  Sum_probs=243.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++++..++ ++.+++++.+.|+++++||+||+.++++|++|++...+.. . ..+|.++|||++|+|+++|++++.|+
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~-~~~~~~~g~e~~G~v~~vG~~v~~~~   77 (325)
T cd08264           1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK-V-KPMPHIPGAEFAGVVEEVGDHVKGVK   77 (325)
T ss_pred             CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC-C-CCCCeecccceeEEEEEECCCCCCCC
Confidence            8999998776 5668999998888999999999999999999998876422 1 22477899999999999999999999


Q ss_pred             CCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+.+.                           ..|+|++|+.++.+.++++|+++++++++.++.++.+||+++..
T Consensus        78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~  157 (325)
T cd08264          78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT  157 (325)
T ss_pred             CCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence            999998651                           35899999999999999999999999999999999999999855


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                       .+++++++++|          +|++|++|++++++|+++|++|+++++    .+.++++|++.+++..+  ..+.+++.
T Consensus       158 -~~~~~g~~vlI----------~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~~~~l~~~  220 (325)
T cd08264         158 -AGLGPGETVVV----------FGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--VEEKVKEI  220 (325)
T ss_pred             -cCCCCCCEEEE----------ECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--HHHHHHHH
Confidence             88999999999          998899999999999999999988873    25667789888887643  24556666


Q ss_pred             hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  293 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (335)
                      +  +++|++++|+|+..+..++++|+++|+++.+|........++...+..++.++.++.....          +.++.+
T Consensus       221 ~--~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~  288 (325)
T cd08264         221 T--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTR----------KELLEL  288 (325)
T ss_pred             h--CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCH----------HHHHHH
Confidence            6  5799999999998888999999999999999875333345666677777778877644321          122336


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeE
Q 019790          294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI  331 (335)
Q Consensus       294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv  331 (335)
                      ++++...  +..+.+.|+++++++|++.+.+++..+|+
T Consensus       289 ~~l~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         289 VKIAKDL--KVKVWKTFKLEEAKEALKELFSKERDGRI  324 (325)
T ss_pred             HHHHHcC--CceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence            6666433  34566889999999999999888777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=4.1e-35  Score=268.17  Aligned_cols=311  Identities=25%  Similarity=0.307  Sum_probs=255.4

Q ss_pred             EEEEEcCCC----CCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCC
Q 019790            2 KAIVITQPG----SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKN   75 (335)
Q Consensus         2 ka~~~~~~~----~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~   75 (335)
                      |||+++..+    .++.+++++.+.|++.+++|+||+.++++|+.|.....+....  +...+.++|+|++|+|+++|++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~   82 (329)
T cd05288           3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP   82 (329)
T ss_pred             cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence            577776554    5688999999999999999999999999999887655543211  1122467899999999999964


Q ss_pred             CCCCCCCCEEEEecCCcceeeEEEecC-CceEeCCCCCC--hhhhcc-CcchHHHHHHHHHHhcCCCCCCEEEEeecccc
Q 019790           76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVS--LKDAAA-FPEVACTVWSTVFMTSHLSPGESFLVDFCSIS  151 (335)
Q Consensus        76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~  151 (335)
                        +|++||+|+++   ++|++|+.++. +.++++|++++  ..++++ +++++.+||+++.....+.+++++||      
T Consensus        83 --~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI------  151 (329)
T cd05288          83 --DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV------  151 (329)
T ss_pred             --CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE------
Confidence              79999999987   58999999999 99999999985  445555 89999999999988788999999999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                          +|+++.+|++++++|+..|++|+++++++++.+.+++ +|++.++++.+.++.+.+.+.++ +++|++|||+|+..
T Consensus       152 ----~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~  226 (329)
T cd05288         152 ----SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEI  226 (329)
T ss_pred             ----ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHH
Confidence                9989999999999999999999999999999999987 99988888887777777777775 68999999999988


Q ss_pred             HHHhhccccCCCEEEEEeccCCCcc-----ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccc
Q 019790          231 FQRNLGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV  305 (335)
Q Consensus       231 ~~~~~~~l~~~G~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  305 (335)
                      +..++++++++|+++.+|.......     .++....+.+++++.+..+....     ....+.+..+++++.+|.+++.
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~i~~~  301 (329)
T cd05288         227 LDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA-----DRFPEALAELAKWLAEGKLKYR  301 (329)
T ss_pred             HHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH-----HHHHHHHHHHHHHHHCCCcccc
Confidence            8899999999999999986654321     12345556788888876654321     1234456668899999998876


Q ss_pred             cccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          306 IYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       306 ~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ....+++++++++++.+.+++..||+++
T Consensus       302 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         302 EDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccccccHHHHHHHHHHHhcCCCccceeC
Confidence            6677999999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=7.5e-36  Score=275.42  Aligned_cols=316  Identities=32%  Similarity=0.443  Sum_probs=247.9

Q ss_pred             CEEEEEcCCCCCc-ceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCC--------------CCCCCCCCCCCc
Q 019790            1 MKAIVITQPGSPE-VLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYP--------------PPKGASPYPGLE   64 (335)
Q Consensus         1 mka~~~~~~~~~~-~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e   64 (335)
                      |||+++..+++++ .+++++.+.|.| .++||+||+.++++|++|++...|...              .....|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            8999999888753 488899999999 599999999999999999998877421              023458899999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCC--
Q 019790           65 CSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP--  139 (335)
Q Consensus        65 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~--  139 (335)
                      ++|+|+.+|+++++|++||+|+++.   ..|+|++|+.++.+.++++|+++++++++.++.++++||+++.....+.+  
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  160 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN  160 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence            9999999999999999999999875   35899999999999999999999999999999999999999877777654  


Q ss_pred             --CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          140 --GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       140 --~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                        |++++|          +|++|++|++++++|+.+|++|+++.++ ++.+.++++|.+.+++.....+...+..   .+
T Consensus       161 ~~g~~vlI----------~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~---~~  226 (350)
T cd08248         161 AAGKRVLI----------LGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE---RG  226 (350)
T ss_pred             CCCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh---cC
Confidence              999999          9989999999999999999999988855 5777778899888888776555555443   35


Q ss_pred             cccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc---ccChh----HHhhcceEEEEeeccc---c-chhhHHHHH
Q 019790          218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNIT----SLFAKRLTVQAAGLRS---R-STENKALIV  286 (335)
Q Consensus       218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~---~-~~~~~~~~~  286 (335)
                      ++|++|||+|+.....++++++++|+++.+|.......   .+...    .+......+.......   + ....    .
T Consensus       227 ~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  302 (350)
T cd08248         227 KFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSP----S  302 (350)
T ss_pred             CCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECC----C
Confidence            79999999999888889999999999999985432111   01000    0000000000000000   0 0000    1


Q ss_pred             HHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          287 SEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       287 ~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ...++.+++++.+|.+.+.+.+.|++++++++++.+.+++..+|++++
T Consensus       303 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         303 GSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             HHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            233555889999999888788999999999999999988888888864

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=8.1e-35  Score=267.75  Aligned_cols=307  Identities=35%  Similarity=0.448  Sum_probs=248.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC--CCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||++++.++.  .+++.+.+.|.+.++|++||+.++++|++|++.+.+..  ......|.++|+|++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~   78 (341)
T cd05281           1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR   78 (341)
T ss_pred             CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence            89999998774  48999999999999999999999999999998765432  111224678999999999999999999


Q ss_pred             CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      |++||+|+++.                           ..|+|++|+.++.+.++++|++++++.+ ++..++.++++++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~  157 (341)
T cd05281          79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV  157 (341)
T ss_pred             CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence            99999998851                           2588999999999999999999998554 5778888888877


Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                      .  ....+++++||          +| .|.+|++++++|+.+|+ +|+++.+++++.+.++++|.+.+++....++. .+
T Consensus       158 ~--~~~~~g~~vlV----------~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~  223 (341)
T cd05281         158 L--AGDVSGKSVLI----------TG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EV  223 (341)
T ss_pred             H--hcCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HH
Confidence            4  45578999999          87 59999999999999999 79888888888888889999888887777777 88


Q ss_pred             HHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChh-HHhhcceEEEEeeccccchhhHHHHHHH
Q 019790          211 KEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSE  288 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (335)
                      .+.++++++|++|||+|+. .....+++|+++|+++.+|..... ..++.. .+..++..+.+......         .+
T Consensus       224 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~  293 (341)
T cd05281         224 KSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-VDIDLNNLVIFKGLTVQGITGRKM---------FE  293 (341)
T ss_pred             HHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-cccccchhhhccceEEEEEecCCc---------ch
Confidence            8888888999999999874 467889999999999999865432 222222 24556777766542211         11


Q ss_pred             HHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          289 VEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       289 ~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+..+.+++.++.+.  +.+.+.++++++++|++.+.+++ .||+|++|
T Consensus       294 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~  341 (341)
T cd05281         294 TWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP  341 (341)
T ss_pred             hHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence            233478889999876  45678899999999999999988 89999987

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-34  Score=263.41  Aligned_cols=300  Identities=24%  Similarity=0.321  Sum_probs=247.4

Q ss_pred             cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhh-cCCCCCC-CCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecC
Q 019790           13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPPP-KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG   90 (335)
Q Consensus        13 ~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~   90 (335)
                      +.+++++.+.|++.++||+||+.++++|++|++.+ .|..+.. ...|.++|+|++|+|+++|++++.+++||+|+++. 
T Consensus         5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-   83 (312)
T cd08269           5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-   83 (312)
T ss_pred             CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence            45999999999999999999999999999999887 6654221 22477899999999999999999999999999885 


Q ss_pred             CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHH
Q 019790           91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG  170 (335)
Q Consensus        91 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a  170 (335)
                      .|+|++|+.++.+.++++|+++  ..++....+++++++++. ..+++++++++|          +| .|.+|.+++++|
T Consensus        84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI----------~g-~g~vg~~~~~la  149 (312)
T cd08269          84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAV----------IG-AGFIGLLFLQLA  149 (312)
T ss_pred             CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEE----------EC-CCHHHHHHHHHH
Confidence            4889999999999999999988  233322378889999885 788999999999          96 799999999999


Q ss_pred             hhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEe
Q 019790          171 KCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       171 ~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g  248 (335)
                      +.+|++ |+++++++++.+.++++|++.++++....+...+.+.+.+.++|+++||+|+. ....++++|+++|+++.+|
T Consensus       150 ~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g  229 (312)
T cd08269         150 AAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFG  229 (312)
T ss_pred             HHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEc
Confidence            999998 99999998899988899998888877778888888888888999999999864 5788899999999999998


Q ss_pred             ccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC
Q 019790          249 TQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ  326 (335)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~  326 (335)
                      ........+++..+..+++++.+.......      ...+.++.+++++.++.+++  ++.+.|+++++++|++.+.+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~  303 (312)
T cd08269         230 YHQDGPRPVPFQTWNWKGIDLINAVERDPR------IGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRP  303 (312)
T ss_pred             cCCCCCcccCHHHHhhcCCEEEEecccCcc------chhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCC
Confidence            665333445555666777777765433221      11345566889999999886  3578899999999999998886


Q ss_pred             C-ceeEEE
Q 019790          327 H-IGKIML  333 (335)
Q Consensus       327 ~-~gkvvi  333 (335)
                      . -+|+++
T Consensus       304 ~~~~~~~~  311 (312)
T cd08269         304 DGFIKGVI  311 (312)
T ss_pred             CCceEEEe
Confidence            4 478876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.1e-35  Score=271.47  Aligned_cols=296  Identities=28%  Similarity=0.381  Sum_probs=242.4

Q ss_pred             eEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC------CCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEE-
Q 019790           15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY------PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-   87 (335)
Q Consensus        15 l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~-   87 (335)
                      +++++.+.|++.++||+||+.++++|++|++.+.+..      +....+|.++|||++|+|+++|++++.|++||+|++ 
T Consensus        39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~  118 (384)
T cd08265          39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE  118 (384)
T ss_pred             EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence            9999999999999999999999999999998876321      222345789999999999999999999999999985 


Q ss_pred             --------------------------ecCCcceeeEEEecCCceEeCCCCC-------ChhhhccCcchHHHHHHHHHHh
Q 019790           88 --------------------------LLGGGGYAEKVAVPAGQVLPVPSGV-------SLKDAAAFPEVACTVWSTVFMT  134 (335)
Q Consensus        88 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~~-------~~~~aa~~~~~~~~a~~~l~~~  134 (335)
                                                +..+|+|++|+.++.+.++++|+++       +.+ +++++.++++||+++...
T Consensus       119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~  197 (384)
T cd08265         119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR  197 (384)
T ss_pred             CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence                                      3336899999999999999999863       445 556888999999998666


Q ss_pred             -cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCc---cHHHH
Q 019790          135 -SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVAR  209 (335)
Q Consensus       135 -~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~  209 (335)
                       .++++|++|||          +| .|.+|++++++|+.+|+ +|+++++++++.+.++++|++.++++...   ++...
T Consensus       198 ~~~~~~g~~VlV----------~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~  266 (384)
T cd08265         198 GGGFRPGAYVVV----------YG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEK  266 (384)
T ss_pred             cCCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHH
Confidence             68999999999          95 79999999999999999 79999988888888899999998887643   67788


Q ss_pred             HHHHhCCCcccEEEeCCChh--hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790          210 VKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVS  287 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
                      +.+.+.++++|+++||+|+.  .+..++++|+++|+++.+|.... ...++...+..+..++.+......         .
T Consensus       267 v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~---------~  336 (384)
T cd08265         267 VMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHSG---------H  336 (384)
T ss_pred             HHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccCC---------c
Confidence            88889888999999999963  56788999999999999986543 234444555666777777643211         1


Q ss_pred             HHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          288 EVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       288 ~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ..++.+++++.++.+++.  +.+.|+++++++|++.+.+. ..+|+|+
T Consensus       337 ~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         337 GIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             chHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            123448889999998763  57889999999999997665 5688875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=9e-35  Score=262.15  Aligned_cols=299  Identities=29%  Similarity=0.484  Sum_probs=250.5

Q ss_pred             CCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEec--CCcceeeEEE
Q 019790           22 DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL--GGGGYAEKVA   99 (335)
Q Consensus        22 ~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~--~~g~~~~~~~   99 (335)
                      .|++.+++|+||+.++++|+.|+..+.+.++....+|.++|+|++|+|+++|+++++|++||+|+++.  ..|+|++|+.
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~   81 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT   81 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence            46788999999999999999999998887655445688999999999999999999999999999885  3489999999


Q ss_pred             ecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEE
Q 019790          100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV  179 (335)
Q Consensus       100 ~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~  179 (335)
                      ++.+.++++|+++++++++.++.++++||+++ +...+.++++++|          +++++.+|.+++++++++|++|++
T Consensus        82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli----------~~~~~~~g~~~~~~a~~~g~~v~~  150 (303)
T cd08251          82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILI----------QTATGGTGLMAVQLARLKGAEIYA  150 (303)
T ss_pred             ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEE----------ecCCcHHHHHHHHHHHHcCCEEEE
Confidence            99999999999999999999999999999998 5789999999999          999999999999999999999999


Q ss_pred             EecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCC-ccccC
Q 019790          180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELN  258 (335)
Q Consensus       180 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~  258 (335)
                      +++++++.+.++++|.+.+++....++...+.+.+.++++|+++||+++......+++++++|+++.+|..... ...++
T Consensus       151 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~  230 (303)
T cd08251         151 TASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVD  230 (303)
T ss_pred             EcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccC
Confidence            99999999999999999999888878888888888888999999999988888899999999999999865422 12233


Q ss_pred             hhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          259 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ... +.+++.+....+..... .......+.+..+.+++.+|.+++...+.|++++++++++.+.+++..+|+++
T Consensus       231 ~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         231 LSV-LSNNQSFHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             hhH-hhcCceEEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            332 33344444333322111 11122345566688999999988878899999999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.5e-34  Score=261.66  Aligned_cols=320  Identities=35%  Similarity=0.554  Sum_probs=263.6

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+++...+.+..+.+.+.+.|.+.+++|+||+.++++|++|+....|..+.....|.++|||++|+|+.+|+++.+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            57777777766678888888888999999999999999999999888765444445778999999999999999999999


Q ss_pred             CCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch
Q 019790           82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG  161 (335)
Q Consensus        82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~  161 (335)
                      ||+|+++...|+|++|+.++.+.++++|+++++.+++.++.+.+++|+++.+...+.++++++|          +|++|.
T Consensus        81 G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli----------~g~~g~  150 (337)
T cd08275          81 GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLV----------HSAAGG  150 (337)
T ss_pred             CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEE----------EcCcch
Confidence            9999999767899999999999999999999999999999999999999988889999999999          998899


Q ss_pred             HHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          162 IGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       162 ~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      +|++++++|+.+ +..++... .+++.+.++.+|.+.+++.....+...+++.++ +++|+++||+|+......++++++
T Consensus       151 ~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~l~~  228 (337)
T cd08275         151 VGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDLLKP  228 (337)
T ss_pred             HHHHHHHHHHHccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHhhcc
Confidence            999999999999 43333332 355777788899888888887788888888775 689999999999888889999999


Q ss_pred             CCEEEEEeccCCCc-c---------------ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc
Q 019790          241 DGRLFIIGTQGGAK-T---------------ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP  304 (335)
Q Consensus       241 ~G~~v~~g~~~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  304 (335)
                      +|+++.+|...... .               ......++.+++++.+..+..... ... .....++.+.+++.++.+++
T Consensus       229 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~  306 (337)
T cd08275         229 MGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKP  306 (337)
T ss_pred             CcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCC
Confidence            99999998665321 1               111234567788888876542211 111 22334566888899999888


Q ss_pred             ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          305 VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       305 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ...+.|++++++++++.+.+++..+|++++|
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         307 KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            7778999999999999999988889999876

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-34  Score=265.53  Aligned_cols=298  Identities=27%  Similarity=0.361  Sum_probs=244.9

Q ss_pred             CEEEEEcCCCCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++.+  ..+++++.+.|.+.++||+||+.++++|++|++...|..+. ..+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~   79 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR   79 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence            899999988852  45888888888899999999999999999999998887654 345889999999999999999999


Q ss_pred             CCCCCEEEEe-----------c-----------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790           79 WKVGDQVCAL-----------L-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        79 ~~~Gd~V~~~-----------~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~  130 (335)
                      |++||+|+..           +                 .+|+|++|+.++.+.++++|+++++.+++.+++++++||++
T Consensus        80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  159 (329)
T cd08298          80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA  159 (329)
T ss_pred             CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence            9999999752           1                 25889999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                      + ..+++++++++||          +| +|++|++++++++..|++|+++++++++++.++++|++.+++....      
T Consensus       160 ~-~~~~~~~~~~vlV----------~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------  221 (329)
T cd08298         160 L-KLAGLKPGQRLGL----------YG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL------  221 (329)
T ss_pred             H-HhhCCCCCCEEEE----------EC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc------
Confidence            9 8899999999999          86 7999999999999999999999999999999999998877765432      


Q ss_pred             HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790          211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV  289 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (335)
                          .++++|+++++.+. ..+..++++++++|+++.+|.........+... +.++..+.+.....          ...
T Consensus       222 ----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~----------~~~  286 (329)
T cd08298         222 ----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLT----------RQD  286 (329)
T ss_pred             ----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCC----------HHH
Confidence                23579999998654 557889999999999998874322211222222 33455555543221          112


Q ss_pred             HHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          290 EKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       290 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ++.+++++.++.+++. .+.|+++++++|++.+++++..||+|+
T Consensus       287 ~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         287 GEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence            3447888889988774 588999999999999999998888874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.3e-34  Score=264.61  Aligned_cols=302  Identities=31%  Similarity=0.401  Sum_probs=243.9

Q ss_pred             cCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCCCCCCCE
Q 019790            7 TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSRWKVGDQ   84 (335)
Q Consensus         7 ~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~   84 (335)
                      +.++.+  +++++.+.|.+.++||+||+.++++|++|+..+.+...  ....+|.++|+|++|+|+++|+++++|++||+
T Consensus         5 ~~~~~~--~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   82 (340)
T TIGR00692         5 TKPGYG--AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY   82 (340)
T ss_pred             ccCCCC--cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence            345554  89999999999999999999999999999988655421  11124668999999999999999999999999


Q ss_pred             EEE---------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC
Q 019790           85 VCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL  137 (335)
Q Consensus        85 V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~  137 (335)
                      |++                           +...|+|++|++++.+.++++|++++++++ +++.++.+|++++  ...+
T Consensus        83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~  159 (340)
T TIGR00692        83 VSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP  159 (340)
T ss_pred             EEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC
Confidence            987                           224589999999999999999999998655 5788889999876  3457


Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      .++++++|          .+ +|.+|.+++++|+.+|++ |+++.+++++.+.++++|.+.++++...++.+.+.+.+++
T Consensus       160 ~~g~~vlI----------~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~  228 (340)
T TIGR00692       160 ISGKSVLV----------TG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDG  228 (340)
T ss_pred             CCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCC
Confidence            89999999          87 699999999999999996 8888778888888899999888888778888888888888


Q ss_pred             CcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChh-HHhhcceEEEEeeccccchhhHHHHHHHHHHHHH
Q 019790          217 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW  294 (335)
Q Consensus       217 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (335)
                      +++|+++||+|+ ..+...+++|+++|+++.+|..... ..++.. .+..+++++.+......         .+.+..+.
T Consensus       229 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  298 (340)
T TIGR00692       229 EGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITGRHM---------FETWYTVS  298 (340)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEecCCc---------hhhHHHHH
Confidence            889999999886 4577889999999999999875322 222333 45567777766542111         11234488


Q ss_pred             HHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          295 PAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       295 ~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++.++.++  +.+.+.+++++++++++.+.+++. ||+|+.+
T Consensus       299 ~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       299 RLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             HHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence            899999986  456899999999999999988774 9999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.6e-34  Score=264.12  Aligned_cols=294  Identities=26%  Similarity=0.362  Sum_probs=238.0

Q ss_pred             cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhc-CCCC-CCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe--
Q 019790           13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYP-PPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL--   88 (335)
Q Consensus        13 ~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~-g~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~--   88 (335)
                      +.+++++.+.|++.++||+||+.++++|++|++.+. +... .....|.++|+|++|+|+++|+++++|++||+|++.  
T Consensus         7 ~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~   86 (339)
T cd08232           7 GDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPS   86 (339)
T ss_pred             CceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccC
Confidence            459999999999999999999999999999998764 3221 112347789999999999999999999999999862  


Q ss_pred             ------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCC
Q 019790           89 ------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS  138 (335)
Q Consensus        89 ------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~  138 (335)
                                                    ..+|+|++|+.++.+.++++|+++++++++. ..++++||+++.....+ 
T Consensus        87 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-  164 (339)
T cd08232          87 RPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-  164 (339)
T ss_pred             CcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-
Confidence                                          1358999999999999999999999999875 67888999998666666 


Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHh-CC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-GG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~  216 (335)
                      ++++|||          .| .|.+|.+++++|+.+|+ +|+++++++++.+.+++++.+.++++++..+    .+.. ..
T Consensus       165 ~~~~VLI----------~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~~~~~  229 (339)
T cd08232         165 AGKRVLV----------TG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAYAADK  229 (339)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhhhccC
Confidence            8999999          87 68999999999999999 8999998888888888899988888765442    2222 23


Q ss_pred             CcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHH
Q 019790          217 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP  295 (335)
Q Consensus       217 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (335)
                      .++|+++||+|+ ..+...+++|+++|+++.+|... .....+...++.+++++.+....           ...++.+++
T Consensus       230 ~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  297 (339)
T cd08232         230 GDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFRF-----------DDEFAEAVR  297 (339)
T ss_pred             CCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEecC-----------HHHHHHHHH
Confidence            469999999996 55788899999999999998654 22334455556677787765421           112344788


Q ss_pred             HHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          296 AIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       296 ~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++.+|.+++  .+.++|+++++++|++.+.+++..||+|+++
T Consensus       298 ~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         298 LLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            899998764  3678899999999999999888889999875

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=2e-34  Score=266.21  Aligned_cols=318  Identities=30%  Similarity=0.419  Sum_probs=240.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCC-CCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC-C
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-R   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~-~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-~   78 (335)
                      .|++++..++++..++..+.+.|. +.+++|+||+.++++|++|+..+.+........|.++|+|++|+|+++|++++ .
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (352)
T cd08247           1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE   80 (352)
T ss_pred             CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence            478999999888555555555543 48999999999999999999887543322222377899999999999999998 8


Q ss_pred             CCCCCEEEEec-----CCcceeeEEEecCC----ceEeCCCCCChhhhccCcchHHHHHHHHHHhc-CCCCCCEEEEeec
Q 019790           79 WKVGDQVCALL-----GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVDFC  148 (335)
Q Consensus        79 ~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~-~~~~~~~vli~~~  148 (335)
                      |++||+|+++.     ..|+|++|++++..    .++++|+++++++++.++...++||+++.... .+++|++++|   
T Consensus        81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI---  157 (352)
T cd08247          81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLV---  157 (352)
T ss_pred             CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEE---
Confidence            99999999875     25899999999987    78999999999999999999999999997777 7999999999   


Q ss_pred             cccccccccccchHHHHHHHHHhhC-CC-eEEEEecChhhHHHHHHcCCCEEEeCCCcc---HHHHHHHHhC-CCcccEE
Q 019790          149 SISYSDVHGGSSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEETG-GKGVDVI  222 (335)
Q Consensus       149 ~~~~~~~~g~~g~~G~~a~~~a~~~-g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~-~~~~d~v  222 (335)
                             +|+++.+|.+++++|+.+ |. .++++. ++++.+.++++|++.+++.....   +...+.+.+. ++++|++
T Consensus       158 -------~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~v  229 (352)
T cd08247         158 -------LGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLI  229 (352)
T ss_pred             -------ECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEE
Confidence                   999899999999999998 55 566665 55666677889998888876655   4444444443 6789999


Q ss_pred             EeCCCh-hhHHHhhcccc---CCCEEEEEeccCCCccc-----------cChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790          223 LDCMGA-SYFQRNLGSLN---IDGRLFIIGTQGGAKTE-----------LNITSLFAKRLTVQAAGLRSRSTENKALIVS  287 (335)
Q Consensus       223 id~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
                      |||+|+ .....++++++   ++|+++.++........           ..... +.+..++....+........    .
T Consensus       230 l~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~  304 (352)
T cd08247         230 LDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARK-LFGSLGLWSYNYQFFLLDPN----A  304 (352)
T ss_pred             EECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhh-hhhhhcCCCcceEEEEecCC----H
Confidence            999998 55677899999   99999987533211000           00011 11122111111110000000    1


Q ss_pred             HHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 019790          288 EVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       288 ~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ..++.+++++.++.+++.+.+.++++++++|++.+++++..||++++
T Consensus       305 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         305 DWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             HHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            33455888999999988788999999999999999998888999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=5.4e-34  Score=264.54  Aligned_cols=298  Identities=24%  Similarity=0.336  Sum_probs=237.7

Q ss_pred             cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEe--
Q 019790           13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL--   88 (335)
Q Consensus        13 ~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~--   88 (335)
                      ..+++++.+.|.+.++||+||+.++++|++|++.+.+....  ...+|.++|||++|+|+++|+++++|++||+|++.  
T Consensus        27 ~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  106 (364)
T PLN02702         27 NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPG  106 (364)
T ss_pred             CceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCC
Confidence            34888899888899999999999999999999988763211  11247789999999999999999999999999862  


Q ss_pred             -----------------------c---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCE
Q 019790           89 -----------------------L---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES  142 (335)
Q Consensus        89 -----------------------~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~  142 (335)
                                             .   ..|+|++|+.++.+.++++|+++++.+++. ..+..++++++ ...++.++++
T Consensus       107 ~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~  184 (364)
T PLN02702        107 ISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETN  184 (364)
T ss_pred             CCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCE
Confidence                                   1   148999999999999999999999998874 34555688887 7788999999


Q ss_pred             EEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCC--CccHHHHHHHH--hCCC
Q 019790          143 FLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEE--TGGK  217 (335)
Q Consensus       143 vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~~~  217 (335)
                      ++|          +| .|++|++++++|+.+|++ ++++++++++.+.++++|++.++++.  ..++.+.+.+.  +.+.
T Consensus       185 vlI----------~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (364)
T PLN02702        185 VLV----------MG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGG  253 (364)
T ss_pred             EEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCC
Confidence            999          96 799999999999999995 67777788888888999998877643  34566666554  3345


Q ss_pred             cccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHH
Q 019790          218 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA  296 (335)
Q Consensus       218 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (335)
                      ++|++|||+|+ ..+..++++++++|+++.+|.... ...+....+..+++++.+++...           ..++.++++
T Consensus       254 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~  321 (364)
T PLN02702        254 GIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRYR-----------NTWPLCLEF  321 (364)
T ss_pred             CCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccCh-----------HHHHHHHHH
Confidence            79999999994 667889999999999999986543 23445566677888888765431           122347888


Q ss_pred             HHCCccc--cccccccch--hhHHHHHHHHHhCCCceeEEEeC
Q 019790          297 IAVGKVK--PVIYKYLPL--CEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       297 ~~~g~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.++.+.  +.+.+.|++  +++++|++.+.+++..+|+|+.+
T Consensus       322 ~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~  364 (364)
T PLN02702        322 LRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL  364 (364)
T ss_pred             HHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence            9899875  456677554  89999999999888888999864

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=4e-34  Score=258.45  Aligned_cols=304  Identities=35%  Similarity=0.581  Sum_probs=253.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++.+..+++++.+.|.+.++||+|++.++++|++|+..+.|...  .....|.++|||++|+|+.+|++++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            8999999888776678888888889999999999999999999998877642  12234788999999999999999999


Q ss_pred             CCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      +++||+|+++.   ..|+|++|+.++...++++|+++++..++.++....++++++.....+.++++++|          
T Consensus        81 ~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv----------  150 (309)
T cd05289          81 FKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLI----------  150 (309)
T ss_pred             CCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEE----------
Confidence            99999999985   25899999999999999999999999999999999999999977777999999999          


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +|++|.+|++++++++..|++|+++++++ +.+.++++|.+.+++....++..    .+.++++|++++|+++.....++
T Consensus       151 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~  225 (309)
T cd05289         151 HGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSL  225 (309)
T ss_pred             ecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHH
Confidence            99889999999999999999999998777 77888888988888776655443    44556799999999998888899


Q ss_pred             ccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA  315 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~  315 (335)
                      ++++++|+++.+|...... .    ....+++++....+...         ...++.+.+++.++.+.+.+++.|+++++
T Consensus       226 ~~l~~~g~~v~~g~~~~~~-~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (309)
T cd05289         226 ALVKPGGRLVSIAGPPPAE-Q----AAKRRGVRAGFVFVEPD---------GEQLAELAELVEAGKLRPVVDRVFPLEDA  291 (309)
T ss_pred             HHHhcCcEEEEEcCCCcch-h----hhhhccceEEEEEeccc---------HHHHHHHHHHHHCCCEEEeeccEEcHHHH
Confidence            9999999999998654321 1    22345566555544211         23445588889999988878899999999


Q ss_pred             HHHHHHHHhCCCceeEEE
Q 019790          316 AEAHQLMESSQHIGKIML  333 (335)
Q Consensus       316 ~~a~~~~~~~~~~gkvvi  333 (335)
                      +++++.+..++..+|+++
T Consensus       292 ~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         292 AEAHERLESGHARGKVVL  309 (309)
T ss_pred             HHHHHHHHhCCCCCcEeC
Confidence            999999998888788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=3.5e-34  Score=262.25  Aligned_cols=301  Identities=30%  Similarity=0.408  Sum_probs=249.5

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      ||+++..+|.  .+++++.+.|.+.+++|+|++.++++|++|+..+.|..+. ..+|.++|+|++|+|+++|+++++|++
T Consensus         1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCccccc
Confidence            6888888854  3999999999999999999999999999999998887643 235789999999999999999999999


Q ss_pred             CCEEEE----------------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           82 GDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        82 Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      ||+|+.                            +...|+|++|+.++.+.++++|+++++.+++.+...+.+||+++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~  157 (330)
T cd08245          78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD  157 (330)
T ss_pred             CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence            999973                            2235899999999999999999999999999999999999999855


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                       .++.+++++||          +| .|.+|.+++++|+.+|++|+++++++++.+.++++|++.+++.........    
T Consensus       158 -~~~~~~~~vlI----------~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----  221 (330)
T cd08245         158 -AGPRPGERVAV----------LG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA----  221 (330)
T ss_pred             -hCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----
Confidence             78999999999          86 677999999999999999999999999999998899888887665443322    


Q ss_pred             hCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN  292 (335)
Q Consensus       214 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (335)
                      .. +++|+++||+++ .....++++++++|+++.++.............++.++.++.+......          ..++.
T Consensus       222 ~~-~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  290 (330)
T cd08245         222 AA-GGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR----------ADLQE  290 (330)
T ss_pred             cc-CCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH----------HHHHH
Confidence            22 479999999875 5578889999999999999865433223334556677888877765321          12344


Q ss_pred             HHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       293 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      +++++.++.+.+ ..+.+++++++++++.+.+++..||+|+
T Consensus       291 ~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         291 ALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence            778888998876 4578999999999999999988888874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-34  Score=259.33  Aligned_cols=262  Identities=37%  Similarity=0.571  Sum_probs=226.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||+++...++ +..+++++.+.|++.+++|+||+.++++|++|.+...|.... ...|.++|+|++|+|+.+|++++.|+
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~   78 (306)
T cd08258           1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWK   78 (306)
T ss_pred             CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCC
Confidence            8999987643 466999999999999999999999999999999988886522 23477899999999999999999999


Q ss_pred             CCCEEEEecC----------------------------CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+++..                            .|+|++|++++.+.++++|+++++++++ ++.+..+||+++.
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~  157 (306)
T cd08258          79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVA  157 (306)
T ss_pred             CCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHH
Confidence            9999998642                            4899999999999999999999999887 7888899999998


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe--cChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA--GSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                      ....+.+++++||          .| .+.+|.+++++|+.+|++|++++  +++++.+.++++|++.+ ++...++...+
T Consensus       158 ~~~~~~~g~~vlI----------~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l  225 (306)
T cd08258         158 ERSGIRPGDTVVV----------FG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELV  225 (306)
T ss_pred             HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHH
Confidence            8889999999999          87 79999999999999999988763  34556777788999887 88888888888


Q ss_pred             HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecccc
Q 019790          211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR  277 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (335)
                      .+.+.++++|+++||+|+ ..+...+++|+++|+++.+|........+++..++.+++++.|++++..
T Consensus       226 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  293 (306)
T cd08258         226 NEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTP  293 (306)
T ss_pred             HHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCch
Confidence            888877889999999975 5577889999999999999887644456778888889999999988654

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.5e-33  Score=252.58  Aligned_cols=306  Identities=34%  Similarity=0.502  Sum_probs=240.7

Q ss_pred             EEcCCCCCcce--EEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            5 VITQPGSPEVL--QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         5 ~~~~~~~~~~l--~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      +++..++++.+  ++++.+.|++.++||+|++.++++|++|++...|..+.  ....|..+|||++|+|+++|++++.+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~   81 (319)
T cd08267           2 VYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFK   81 (319)
T ss_pred             eeCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCC
Confidence            34556666555  88888999999999999999999999999988776532  122366899999999999999999999


Q ss_pred             CCCEEEEecC---CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790           81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      +||+|+++..   .|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++++|          +|
T Consensus        82 ~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli----------~g  151 (319)
T cd08267          82 VGDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI----------NG  151 (319)
T ss_pred             CCCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE----------Ec
Confidence            9999998863   5899999999999999999999999999999999999999988778999999999          99


Q ss_pred             ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh--hHHHhh
Q 019790          158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNL  235 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~  235 (335)
                      ++|.+|++++++|+.+|++|++++++ ++.+.++++|.+.+++....++.   ...+.++++|++++|+|+.  .....+
T Consensus       152 ~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~  227 (319)
T cd08267         152 ASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLYRAS  227 (319)
T ss_pred             CCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHHHhh
Confidence            88999999999999999999998865 77888888998888876655543   4455667899999999953  233444


Q ss_pred             ccccCCCEEEEEeccCCCccccC---hhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  312 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l  312 (335)
                      ..++++|+++.+|..........   ..........+........         .+.++.+++++.++.+.+.+.+.|++
T Consensus       228 ~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~~  298 (319)
T cd08267         228 LALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPN---------AEDLEQLAELVEEGKLKPVIDSVYPL  298 (319)
T ss_pred             hccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCC---------HHHHHHHHHHHHCCCeeeeeeeEEcH
Confidence            45999999999987553321111   0111111222222221110         23455588889999988888899999


Q ss_pred             hhHHHHHHHHHhCCCceeEEE
Q 019790          313 CEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       313 ~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      +++++|++.+.+++..+|+++
T Consensus       299 ~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         299 EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             HHHHHHHHHHhcCCCCCcEeC
Confidence            999999999998888788774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=100.00  E-value=1.1e-32  Score=246.42  Aligned_cols=290  Identities=33%  Similarity=0.545  Sum_probs=243.2

Q ss_pred             CcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEe
Q 019790           28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP  107 (335)
Q Consensus        28 ~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~  107 (335)
                      +||+||+.++++|++|++...|..+   .+|.++|+|++|+|+++|+++..|++||+|+++. .|+|++|+.++.+.+++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~   76 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK   76 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence            5899999999999999999887652   3478999999999999999999999999999985 48999999999999999


Q ss_pred             CCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH
Q 019790          108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL  187 (335)
Q Consensus       108 ~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~  187 (335)
                      +|+++++.+++.++++..++|.++.+..++++|++++|          +|+.|.+|++++++++.+|++|+++++++++.
T Consensus        77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv----------~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  146 (293)
T cd05195          77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLI----------HAAAGGVGQAAIQLAQHLGAEVFATVGSEEKR  146 (293)
T ss_pred             CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEE----------ecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            99999999999999999999999988889999999999          99899999999999999999999999999999


Q ss_pred             HHHHHcC--CCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCc-cccChhHHhh
Q 019790          188 AVCKDLG--ADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK-TELNITSLFA  264 (335)
Q Consensus       188 ~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~  264 (335)
                      +.+++.+  ++.+++.....+.+.+.+.+.++++|++++|+|+..+..++++++++|+++.+|...... ..+.... +.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~  225 (293)
T cd05195         147 EFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FL  225 (293)
T ss_pred             HHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhh-hc
Confidence            9988887  677788777778888888888888999999999988888999999999999998655321 1222222 34


Q ss_pred             cceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      +++++....+...... ......+.+..+.+++.++.+++.....+++++++++++.+..++..+|+++
T Consensus       226 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         226 RNVSFSSVDLDQLARE-RPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             cCCeEEEEeHHHHhhh-ChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence            5666666554332111 1112344566688999999998888888999999999999998888788764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=100.00  E-value=4.2e-32  Score=242.49  Aligned_cols=284  Identities=32%  Similarity=0.553  Sum_probs=237.3

Q ss_pred             EEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCC
Q 019790           32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        32 I~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      ||+.++++|++|++...|..+.    |.++|+|++|+|+++|++++.|++||+|++++. |+|++|+.++.+.++++|++
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~~----~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~~~~p~~   76 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-GSFATYVRTDARLVVPIPDG   76 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCCC----CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-CceeeEEEccHHHeEECCCC
Confidence            8999999999999998876542    578999999999999999999999999999864 89999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +++.+++.++++..++|+++.+...+.++++++|          +|+.+.+|++++++++.+|++|+++++++++.+.++
T Consensus        77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv----------~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~  146 (288)
T smart00829       77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLI----------HAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR  146 (288)
T ss_pred             CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEE----------ecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            9999999999999999999878889999999999          998999999999999999999999999999999999


Q ss_pred             HcCC--CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceE
Q 019790          192 DLGA--DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT  268 (335)
Q Consensus       192 ~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~  268 (335)
                      ++|.  +.++++...++.+.+.+.+.++++|+++|++++..+..++++++++|+++.+|..... ...++... +.++++
T Consensus       147 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~  225 (288)
T smart00829      147 ELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVS  225 (288)
T ss_pred             HcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCce
Confidence            9997  6778877777888888888877899999999987788899999999999999865421 12233333 456667


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      +.+..+.... .. .....+.++.+++++.++++.+...+.|++++++++++.+..++..+|+++
T Consensus       226 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv  288 (288)
T smart00829      226 YHAVDLDALE-EG-PDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL  288 (288)
T ss_pred             EEEEEHHHhh-cC-hHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence            6666543221 01 111233455688889999887766788999999999999998887778764

Enoylreductase in Polyketide synthases.

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.5e-31  Score=239.36  Aligned_cols=232  Identities=22%  Similarity=0.319  Sum_probs=191.3

Q ss_pred             CCCCceEEEEEEecCCCC------CCCCCCEEEEec----------------------------------CCcceeeEEE
Q 019790           60 YPGLECSGTILSVGKNVS------RWKVGDQVCALL----------------------------------GGGGYAEKVA   99 (335)
Q Consensus        60 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~~~~~~   99 (335)
                      ++|||++|+|+++|++++      +|++||||+...                                  .+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999998      899999996421                                  1489999999


Q ss_pred             ecCC-ceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-E
Q 019790          100 VPAG-QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-V  177 (335)
Q Consensus       100 ~~~~-~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V  177 (335)
                      ++++ .++++|+++++++++.+++...|+|+++.+ ....+++++||          +| .|++|++++|+|+.+|++ |
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV----------~G-~G~vG~~~~~~ak~~G~~~V  148 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEA-AGDLKGRRVLV----------VG-AGMLGLTAAAAAAAAGAARV  148 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHh-ccCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEE
Confidence            9997 699999999999999999999999999854 45569999999          97 599999999999999996 8


Q ss_pred             EEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCC-Ccc
Q 019790          178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKT  255 (335)
Q Consensus       178 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~  255 (335)
                      +++++++++++.++++|++.+++...  ..+.+.+.+.+.++|++|||+|+. .+..+++.++++|+++.+|.... ...
T Consensus       149 i~~~~~~~r~~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~  226 (280)
T TIGR03366       149 VAADPSPDRRELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPV  226 (280)
T ss_pred             EEECCCHHHHHHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCce
Confidence            88888999999999999998887643  245566777777899999999875 47889999999999999997543 334


Q ss_pred             ccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCC--c--cccccccccchhhH
Q 019790          256 ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG--K--VKPVIYKYLPLCEA  315 (335)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--~~~~~~~~~~l~~~  315 (335)
                      +++...++.+++++.++.....  .        .++++++++.++  .  ++++++++|+|+|+
T Consensus       227 ~i~~~~~~~~~~~i~g~~~~~~--~--------~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       227 ALDPEQVVRRWLTIRGVHNYEP--R--------HLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             eeCHHHHHhCCcEEEecCCCCH--H--------HHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            6778888899999999765321  1        133377788764  3  44678999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=100.00  E-value=3.7e-30  Score=219.41  Aligned_cols=301  Identities=21%  Similarity=0.278  Sum_probs=239.7

Q ss_pred             cceEEEeec---CCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCC----CceEEEEEEecCCCCCCCCCCEE
Q 019790           13 EVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG----LECSGTILSVGKNVSRWKVGDQV   85 (335)
Q Consensus        13 ~~l~~~~~~---~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G----~e~~G~V~~vG~~~~~~~~Gd~V   85 (335)
                      +++.++...   ..++.+++|+||.+|-+..|.-...+....+...-.|+.||    ...+|+|++.  +-+++++||.|
T Consensus        20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v   97 (343)
T KOG1196|consen   20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLV   97 (343)
T ss_pred             ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceE
Confidence            556555544   45678899999999999988765544433322222234444    2678999995  55679999999


Q ss_pred             EEecCCcceeeEEEecCCceE--eCC--CCCChhhh-ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           86 CALLGGGGYAEKVAVPAGQVL--PVP--SGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        86 ~~~~~~g~~~~~~~~~~~~~~--~~p--~~~~~~~a-a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +++.   +|.||.+++.....  +++  .+.++.-. ..+.++..|||..++++...++|++++|          .+++|
T Consensus        98 ~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~V----------SaAsG  164 (343)
T KOG1196|consen   98 WGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFV----------SAASG  164 (343)
T ss_pred             EEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEE----------eeccc
Confidence            9995   79999999775433  333  34443333 2488999999999999999999999999          99999


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChhhHHHhhccc
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSL  238 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (335)
                      ++|..+.|+|+.+||+|+.++.++++...++ ++|.+..+||.++ +..+.+++ ...+++|+.||++|+..+...+..|
T Consensus       165 AvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r-~~P~GIDiYfeNVGG~~lDavl~nM  243 (343)
T KOG1196|consen  165 AVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKR-CFPEGIDIYFENVGGKMLDAVLLNM  243 (343)
T ss_pred             hhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHH-hCCCcceEEEeccCcHHHHHHHHhh
Confidence            9999999999999999999999999999987 5899999999998 56666655 5556999999999999999999999


Q ss_pred             cCCCEEEEEeccCCCccc-----cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchh
Q 019790          239 NIDGRLFIIGTQGGAKTE-----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLC  313 (335)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~  313 (335)
                      +..||++.+|.....+.+     .+....+.|++++.++......+.     ....++++.+++++|+++-..+-.-+|+
T Consensus       244 ~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~-----~~k~ld~l~~~ikegKI~y~edi~~Gle  318 (343)
T KOG1196|consen  244 NLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDK-----YPKFLDFLLPYIKEGKITYVEDIADGLE  318 (343)
T ss_pred             hhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhh-----hHHHHHHHHHHHhcCceEEehhHHHHHh
Confidence            999999999988754322     234566889999999776655432     3456677999999999988877778899


Q ss_pred             hHHHHHHHHHhCCCceeEEEe
Q 019790          314 EAAEAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       314 ~~~~a~~~~~~~~~~gkvvi~  334 (335)
                      ..++||.-|.+++++||-++.
T Consensus       319 n~P~A~vglf~GkNvGKqiv~  339 (343)
T KOG1196|consen  319 NGPSALVGLFHGKNVGKQLVK  339 (343)
T ss_pred             ccHHHHHHHhccCcccceEEE
Confidence            999999999999999998875

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.8e-30  Score=229.11  Aligned_cols=237  Identities=39%  Similarity=0.645  Sum_probs=205.9

Q ss_pred             cEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEec-------------------
Q 019790           29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL-------------------   89 (335)
Q Consensus        29 eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------   89 (335)
                      ||+|+|.++++|+.|+..+.|..+.....|.++|+|++|+|+++|++++.|++||+|+++.                   
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~   80 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI   80 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence            6899999999999999999887653334578899999999999999999999999999875                   


Q ss_pred             ----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHH
Q 019790           90 ----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTF  165 (335)
Q Consensus        90 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~  165 (335)
                          ..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.+++++||          +|+.+ +|++
T Consensus        81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli----------~g~~~-~G~~  149 (271)
T cd05188          81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLV----------LGAGG-VGLL  149 (271)
T ss_pred             eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEE----------ECCCH-HHHH
Confidence                25899999999999999999999999999999999999999987777799999999          99766 9999


Q ss_pred             HHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEE
Q 019790          166 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRL  244 (335)
Q Consensus       166 a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~  244 (335)
                      ++++++..|.+|+++++++++.+.+++++.+.+++.....+...+. .+.++++|++++|+++ ......+++++++|++
T Consensus       150 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~  228 (271)
T cd05188         150 AAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRI  228 (271)
T ss_pred             HHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEE
Confidence            9999999999999999999999999999988888887777766666 6666789999999998 6678889999999999


Q ss_pred             EEEeccCCCccccChhHHhhcceEEEEeecccc
Q 019790          245 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR  277 (335)
Q Consensus       245 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (335)
                      +.+|..............+.+++++.++.....
T Consensus       229 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (271)
T cd05188         229 VVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR  261 (271)
T ss_pred             EEEccCCCCCCcccHHHHHhcceEEEEeecCCH
Confidence            999876654333335566788999998876644

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=7.8e-31  Score=253.99  Aligned_cols=304  Identities=26%  Similarity=0.346  Sum_probs=258.2

Q ss_pred             CCCcceEEEeecCC---CCCCCcEEEEEEEeecCcchhhhhcCCCCCCC------CCCCCCCCceEEEEEEecCCCCCCC
Q 019790           10 GSPEVLQLQEVEDP---QIKDDEVLIKVEATALNRADTLQRKGSYPPPK------GASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus        10 ~~~~~l~~~~~~~~---~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |+...++|.+.+..   +..++.=+.-|.|++||..|+....|+.+...      .....+|-||+|+          .+
T Consensus      1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred             ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence            55667888888754   44667788999999999999999999875421      1235678888886          56


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      .|.||+++.+--++++.+.++.+.+|.+|.+..+++|++.|+.+.|||++|..++..++|+++||          ++|+|
T Consensus      1494 ~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLI----------HaGsG 1563 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILI----------HAGSG 1563 (2376)
T ss_pred             CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEE----------ecCCC
Confidence            79999999988899999999999999999999999999999999999999999999999999999          99999


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhc
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG  236 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (335)
                      ++|++||.+|.++|++|+-++.+.++++++.+    +....+-|+++.+|...+..+|.|+|+|+|++....+.++..++
T Consensus      1564 GVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiR 1643 (2376)
T KOG1202|consen 1564 GVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIR 1643 (2376)
T ss_pred             chhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHH
Confidence            99999999999999999999999999999874    34556678888999999999999999999999999999999999


Q ss_pred             cccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790          237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA  316 (335)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~  316 (335)
                      ||+-+|||..+|...-+..+.-....+.++.+++|..+.....-+ .+.+++...-+.+-+++|.++|+.+++|+-.+++
T Consensus      1644 CLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege-~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE 1722 (2376)
T KOG1202|consen 1644 CLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGE-EEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVE 1722 (2376)
T ss_pred             HHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCc-HHHHHHHHHHHHhhhccCceeccccccccHHHHH
Confidence            999999999999776543333344567899999999988764322 2334443333445566667999999999999999


Q ss_pred             HHHHHHHhCCCceeEEEe
Q 019790          317 EAHQLMESSQHIGKIMLV  334 (335)
Q Consensus       317 ~a~~~~~~~~~~gkvvi~  334 (335)
                      +||++|.+++++||+|++
T Consensus      1723 ~AFRfMasGKHIGKVvik 1740 (2376)
T KOG1202|consen 1723 DAFRFMASGKHIGKVVIK 1740 (2376)
T ss_pred             HHHHHHhccCccceEEEE
Confidence            999999999999999985

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.96  E-value=1.2e-27  Score=213.69  Aligned_cols=251  Identities=27%  Similarity=0.405  Sum_probs=199.2

Q ss_pred             CCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcC
Q 019790           57 ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH  136 (335)
Q Consensus        57 ~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~  136 (335)
                      +|.++|+|++|+|+++|+++++|++||+|+++   +.|++|+.++.+.++++|++++..+++.+ .++++||+++ ...+
T Consensus        20 ~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~   94 (277)
T cd08255          20 LPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAE   94 (277)
T ss_pred             CCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcC
Confidence            68999999999999999999999999999998   46999999999999999999999999888 8899999998 4688


Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcC-CCEEEeCCCccHHHHHHHHh
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEET  214 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~  214 (335)
                      +.+++++||          +| .|.+|++++++|+++|++ |+++++++++.+.++++| ++.+++...        ..+
T Consensus        95 ~~~g~~vlI----------~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~  155 (277)
T cd08255          95 PRLGERVAV----------VG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA--------DEI  155 (277)
T ss_pred             CCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch--------hhh
Confidence            999999999          96 799999999999999998 999999999999888888 555443321        123


Q ss_pred             CCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH--HHHHHHHH
Q 019790          215 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA--LIVSEVEK  291 (335)
Q Consensus       215 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  291 (335)
                      .++++|++|||++. ......+++++++|+++.+|..... .......+..+.+++.+..+.........  ....+.++
T Consensus       156 ~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (277)
T cd08255         156 GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLE  234 (277)
T ss_pred             cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHH
Confidence            45689999999885 4577889999999999999876544 22222334446667777665432111100  01123455


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhC-CCceeEE
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-QHIGKIM  332 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvv  332 (335)
                      .+++++.++.+++.+.+.|+++++++|++.++++ ....|++
T Consensus       235 ~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~  276 (277)
T cd08255         235 EALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV  276 (277)
T ss_pred             HHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence            5889999999888888999999999999999876 3445665

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.75  E-value=2.5e-17  Score=130.10  Aligned_cols=116  Identities=41%  Similarity=0.738  Sum_probs=109.0

Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC-hhhHHHhhcccc
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLN  239 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g-~~~~~~~~~~l~  239 (335)
                      ++|++++|+|+++|++|+++++++++++.++++|++.++++++.++.+.+++.+++.++|++|||+| ...+..++++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~   80 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR   80 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999999999999999999889999999999 567899999999


Q ss_pred             CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccc
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS  276 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (335)
                      ++|+++.+|.......+++...++.+++++.++....
T Consensus        81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~  117 (130)
T PF00107_consen   81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS  117 (130)
T ss_dssp             EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred             cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence            9999999999886667889999999999999998876

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.72  E-value=1.9e-17  Score=126.60  Aligned_cols=82  Identities=40%  Similarity=0.618  Sum_probs=70.0

Q ss_pred             CCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEec-----------------
Q 019790           27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL-----------------   89 (335)
Q Consensus        27 ~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-----------------   89 (335)
                      |+||+|||.++|||++|++.+.|.......+|.++|||++|+|+++|+++++|++||+|+...                 
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            689999999999999999999996555566799999999999999999999999999998632                 


Q ss_pred             ----------CCcceeeEEEecCCceEeC
Q 019790           90 ----------GGGGYAEKVAVPAGQVLPV  108 (335)
Q Consensus        90 ----------~~g~~~~~~~~~~~~~~~~  108 (335)
                                .+|+|++|+.++++.++++
T Consensus        81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                      2589999999999998874

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.54  E-value=1.8e-14  Score=113.20  Aligned_cols=124  Identities=35%  Similarity=0.498  Sum_probs=81.3

Q ss_pred             cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC--hhhH-HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEE
Q 019790          193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV  269 (335)
Q Consensus       193 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  269 (335)
                      +|+++++||++.++       +..++||+||||+|  .+.+ ..++++| ++|+++.++.      .........+...+
T Consensus         1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~   66 (127)
T PF13602_consen    1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI   66 (127)
T ss_dssp             CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred             CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence            68999999997766       44568999999999  6554 6677888 9999999874      11111111222233


Q ss_pred             EEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          270 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ....+......   ...++.++.+.+++.+|+++|.+.++||++++++|++.+++++..||+|+
T Consensus        67 ~~~~~~~~~~~---~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   67 RYSFLFSVDPN---AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             EEECCC-H--H---HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             EEEEEEecCCC---chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            33333221111   12344567799999999999999999999999999999999999999986

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.29  E-value=1.9e-10  Score=106.69  Aligned_cols=176  Identities=14%  Similarity=0.126  Sum_probs=131.1

Q ss_pred             HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      .|.++.+..+ ..+|++|+|          .| .|++|+.+++.++.+|++|+++++++.+.+.++.+|+..+ +     
T Consensus       188 ~~~~i~r~t~~~l~GktVvV----------iG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----  250 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVV----------AG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----  250 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----
Confidence            3455545444 468999999          88 7999999999999999999999999999999999998443 1     


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChhh-HHHh-hccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          206 FVARVKEETGGKGVDVILDCMGASY-FQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~-~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      ..+    ..  +++|+||+|+|+.. +... +..++++|+++.+|..   ..+++...+..+++++.++....... ..+
T Consensus       251 ~~e----~v--~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~~~-~~~  320 (413)
T cd00401         251 MEE----AV--KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVDRY-ELP  320 (413)
T ss_pred             HHH----HH--cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcceE-EcC
Confidence            111    22  25899999999865 5554 9999999999999854   34688888888899998876653211 000


Q ss_pred             HHHHHHHHHHHHHHHCCcc---ccccccc-----cchh-hHHHHHHHHHhCCCc-eeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKV---KPVIYKY-----LPLC-EAAEAHQLMESSQHI-GKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~---~~~~~~~-----~~l~-~~~~a~~~~~~~~~~-gkvvi~~  335 (335)
                      .      ...+.++.+|.+   .+.+++.     ++|+ ++.++++.+.+.... -|+++.|
T Consensus       321 ~------g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         321 D------GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             C------cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            0      017789999986   4456777     8899 999999999876542 4676654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.17  E-value=7.2e-10  Score=105.46  Aligned_cols=127  Identities=17%  Similarity=0.192  Sum_probs=95.5

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCc-----------
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTE-----------  204 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~-----------  204 (335)
                      ..++++|+|          .| .|++|+++++.|+.+|++|++++.++++++.++++|++.+ +|..+.           
T Consensus       162 ~~pg~kVlV----------iG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~  230 (509)
T PRK09424        162 KVPPAKVLV----------IG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVM  230 (509)
T ss_pred             CcCCCEEEE----------EC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhc
Confidence            457899999          88 7999999999999999999999999999999999999854 554321           


Q ss_pred             --cHHHHHHHHhCC--CcccEEEeCCChh------h-HHHhhccccCCCEEEEEeccCCCc--cccChhHHhh-cceEEE
Q 019790          205 --DFVARVKEETGG--KGVDVILDCMGAS------Y-FQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFA-KRLTVQ  270 (335)
Q Consensus       205 --~~~~~~~~~~~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~  270 (335)
                        ++.+...+....  +++|++|+|++..      . .+.+++.++++|+++.+|...+..  .+.+...++. +++++.
T Consensus       231 s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~  310 (509)
T PRK09424        231 SEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTII  310 (509)
T ss_pred             chhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEE
Confidence              222222232221  4799999999852      2 488999999999999998754332  3444445555 789998


Q ss_pred             Eeec
Q 019790          271 AAGL  274 (335)
Q Consensus       271 ~~~~  274 (335)
                      |.+-
T Consensus       311 Gv~n  314 (509)
T PRK09424        311 GYTD  314 (509)
T ss_pred             EeCC
Confidence            8763

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.26  E-value=5.2e-06  Score=73.94  Aligned_cols=167  Identities=19%  Similarity=0.203  Sum_probs=97.9

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHc----CCCEEEeCCCccHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDL----GADVCINYKTEDFVA  208 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~  208 (335)
                      ..+.++++||.          +| +|. |..+.++++..|.  +|++++.+++..+.+++.    +...+. ....+   
T Consensus        73 ~~~~~g~~VLD----------iG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d---  136 (272)
T PRK11873         73 AELKPGETVLD----------LG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE---  136 (272)
T ss_pred             ccCCCCCEEEE----------eC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc---
Confidence            56789999999          87 566 8888888888765  699999999988888753    332211 11111   


Q ss_pred             HHHHHh-CCCcccEEEeCC------Ch-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh
Q 019790          209 RVKEET-GGKGVDVILDCM------GA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE  280 (335)
Q Consensus       209 ~~~~~~-~~~~~d~vid~~------g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (335)
                       +.+.. ....||+|+.+.      .. ..+..+++.|+++|+++..+.....  .++  ....+...+.+.........
T Consensus       137 -~~~l~~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~  211 (272)
T PRK11873        137 -IEALPVADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG--ELP--EEIRNDAELYAGCVAGALQE  211 (272)
T ss_pred             -hhhCCCCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC--CCC--HHHHHhHHHHhccccCCCCH
Confidence             12211 234799998543      11 3478899999999999987654322  121  11112222221111111111


Q ss_pred             hHHHHHHHHHHHHHHHHHCCccc---cccccccchhhHHHHHHHH--HhCCCceeEE
Q 019790          281 NKALIVSEVEKNVWPAIAVGKVK---PVIYKYLPLCEAAEAHQLM--ESSQHIGKIM  332 (335)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~a~~~~--~~~~~~gkvv  332 (335)
                                +.+.+++.+..+.   ......++++++.++++.+  .+++..++.+
T Consensus       212 ----------~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        212 ----------EEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             ----------HHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceE
Confidence                      1144555553333   3345678899999999988  5555445544

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.20  E-value=1.5e-05  Score=76.02  Aligned_cols=105  Identities=23%  Similarity=0.326  Sum_probs=78.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCC-------------
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT-------------  203 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~-------------  203 (335)
                      .++.+++|          .| .|.+|+++++.++.+|++|+++++++++++.++++|++.+ ++..+             
T Consensus       162 vp~akVlV----------iG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s  230 (511)
T TIGR00561       162 VPPAKVLV----------IG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMS  230 (511)
T ss_pred             CCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecC
Confidence            35688999          88 7999999999999999999999999999999999998763 22211             


Q ss_pred             ccHHHHHHHHhC--CCcccEEEeCC---Chh----hHHHhhccccCCCEEEEEeccCCC
Q 019790          204 EDFVARVKEETG--GKGVDVILDCM---GAS----YFQRNLGSLNIDGRLFIIGTQGGA  253 (335)
Q Consensus       204 ~~~~~~~~~~~~--~~~~d~vid~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~  253 (335)
                      .++.+...+.+.  .+++|++|+|+   |..    .....++.+++++.++.++...+.
T Consensus       231 ~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GG  289 (511)
T TIGR00561       231 EEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGG  289 (511)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCC
Confidence            122222222222  24699999999   542    247789999999999998766554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.19  E-value=0.00024  Score=63.89  Aligned_cols=110  Identities=20%  Similarity=0.294  Sum_probs=80.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+.+++|          .| .|.+|..+++.++.+|++|++.+++.++.+.++++|...+ ..      ..+.+...  .
T Consensus       151 ~g~kvlV----------iG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~------~~l~~~l~--~  210 (296)
T PRK08306        151 HGSNVLV----------LG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL------SELAEEVG--K  210 (296)
T ss_pred             CCCEEEE----------EC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH------HHHHHHhC--C
Confidence            5789999          88 7999999999999999999999999888888888886533 11      12333332  5


Q ss_pred             ccEEEeCCChhhH-HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEE
Q 019790          219 VDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA  271 (335)
Q Consensus       219 ~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
                      +|+||+|++...+ ...+..+++++.++.++...+. ..+.  ....++++..+
T Consensus       211 aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~~pgg-td~~--~a~~~Gv~~~~  261 (296)
T PRK08306        211 IDIIFNTIPALVLTKEVLSKMPPEALIIDLASKPGG-TDFE--YAEKRGIKALL  261 (296)
T ss_pred             CCEEEECCChhhhhHHHHHcCCCCcEEEEEccCCCC-cCee--ehhhCCeEEEE
Confidence            8999999987643 5677889999999998766644 2332  22334555553

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.96  E-value=0.00013  Score=68.43  Aligned_cols=104  Identities=16%  Similarity=0.166  Sum_probs=78.3

Q ss_pred             HHHHHHHHhcCCC-CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790          126 TVWSTVFMTSHLS-PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE  204 (335)
Q Consensus       126 ~a~~~l~~~~~~~-~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~  204 (335)
                      .+|.++.+..++. .|++++|          .| .|.+|..+++.++.+|++|+++++++.+...+...|+. +.+    
T Consensus       197 s~~~ai~rat~~~l~Gk~VlV----------iG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~----  260 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVV----------AG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT----  260 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC----
Confidence            3566665554544 8999999          88 79999999999999999999999888877666666654 221    


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhh-HH-HhhccccCCCEEEEEeccCC
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~~  252 (335)
                       ..    +..  +++|++|+|+|... +. ..+..+++++.++.+|....
T Consensus       261 -l~----eal--~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        261 -ME----EAA--ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             -HH----HHH--hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence             11    222  25899999999865 43 57889999999999887653

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.82  E-value=0.0002  Score=60.08  Aligned_cols=116  Identities=22%  Similarity=0.214  Sum_probs=80.6

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH---
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV---  189 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~---  189 (335)
                      +....-++..+...|.  +.....++++++||-          +|  ++.|..++-+++..| +|+.+.+.++-.+.   
T Consensus        48 pi~~gqtis~P~~vA~--m~~~L~~~~g~~VLE----------IG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~  112 (209)
T COG2518          48 PIGCGQTISAPHMVAR--MLQLLELKPGDRVLE----------IG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARR  112 (209)
T ss_pred             cCCCCceecCcHHHHH--HHHHhCCCCCCeEEE----------EC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHH
Confidence            3333444444444444  336678999999999          88  667999999999988 99999988774444   


Q ss_pred             -HHHcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEEe
Q 019790          190 -CKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       190 -~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  248 (335)
                       ++.+|...+ +...+..     +.+....+||.|+-+.+.... ...+++|+++|+++..-
T Consensus       113 ~L~~lg~~nV~v~~gDG~-----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         113 NLETLGYENVTVRHGDGS-----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             HHHHcCCCceEEEECCcc-----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence             445776433 3333321     223334699999998887765 66799999999998663

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.79  E-value=0.0004  Score=64.77  Aligned_cols=102  Identities=16%  Similarity=0.167  Sum_probs=76.5

Q ss_pred             HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      +|.++.+..+ ...|++++|          .| .|.+|..+++.++.+|++|+++..++.+...+...|+. +.+     
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvV----------iG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----  243 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVV----------AG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----  243 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEE----------EC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----
Confidence            4455545444 368999999          88 89999999999999999999998888777666666763 221     


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChhh-HH-HhhccccCCCEEEEEeccC
Q 019790          206 FVARVKEETGGKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~  251 (335)
                      ..+.+      ++.|++|+++|... +. ..+..+++++.++.+|...
T Consensus       244 leeal------~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       244 MEEAA------KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             HHHHH------hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            11111      25799999999866 43 4788999999999888654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.74  E-value=0.0013  Score=61.03  Aligned_cols=141  Identities=13%  Similarity=0.172  Sum_probs=84.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCC---Ch--h
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCM---GA--S  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~---g~--~  229 (335)
                      .| .|.+|+.+++.++.+|++|+++++++++.+.+.. ++.........   .+.+.+...  .+|++|+|+   +.  .
T Consensus       173 iG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~--~aDvVI~a~~~~g~~~p  246 (370)
T TIGR00518       173 IG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK--RADLLIGAVLIPGAKAP  246 (370)
T ss_pred             Ec-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc--cCCEEEEccccCCCCCC
Confidence            76 7999999999999999999999999888777654 44432222221   123344433  589999998   33  1


Q ss_pred             h--HHHhhccccCCCEEEEEeccCCCccccC-hh-----HHhhcceEEEEe-eccccchhhHHHH-HHHHHHHHHHHHHC
Q 019790          230 Y--FQRNLGSLNIDGRLFIIGTQGGAKTELN-IT-----SLFAKRLTVQAA-GLRSRSTENKALI-VSEVEKNVWPAIAV  299 (335)
Q Consensus       230 ~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~  299 (335)
                      .  ....+..+++++.++.++...+...... ..     .....+++..+. .+...-+.+.... -+..++.+..+..+
T Consensus       247 ~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l~~~l~~~~~~  326 (370)
T TIGR00518       247 KLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNATMPYVLELANH  326 (370)
T ss_pred             cCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            1  3667888999999999886655432211 11     112234555554 2333323333333 33344555566655


Q ss_pred             Ccc
Q 019790          300 GKV  302 (335)
Q Consensus       300 g~~  302 (335)
                      |.+
T Consensus       327 g~~  329 (370)
T TIGR00518       327 GWR  329 (370)
T ss_pred             ccc
Confidence            643

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02494 adenosylhomocysteinase

Probab=97.72  E-value=0.0004  Score=65.47  Aligned_cols=101  Identities=16%  Similarity=0.158  Sum_probs=77.4

Q ss_pred             HHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          128 WSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       128 ~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      +.++.+..++ -.|++++|          .| .|.+|..+++.++.+|++|+++.+++.+...+...|+..+ +     .
T Consensus       241 ~d~i~r~t~i~LaGKtVvV----------iG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----l  303 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVI----------CG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-T-----L  303 (477)
T ss_pred             HHHHHHhcCCccCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-c-----H
Confidence            5555555444 67899999          87 8999999999999999999999988877666666776432 1     1


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCCCEEEEEeccC
Q 019790          207 VARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      .+.+      ...|+++.|.|+..  ....+..|++++.++.+|...
T Consensus       304 eEal------~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        304 EDVV------SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             HHHH------hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence            1222      24799999999865  367899999999999998743

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.66  E-value=0.0012  Score=58.06  Aligned_cols=140  Identities=19%  Similarity=0.278  Sum_probs=89.2

Q ss_pred             CCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      .+.+||+++...   +|.+|.. +...++.+++++++..+. .+.... ....+..  .+.++.+||-          .|
T Consensus        66 p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~--~~~~~~~VLD----------iG  127 (250)
T PRK00517         66 PIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEK--LVLPGKTVLD----------VG  127 (250)
T ss_pred             CEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHh--hcCCCCEEEE----------eC
Confidence            467888877653   4666644 667788999888887665 222111 2222211  2467888888          77


Q ss_pred             ccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc----CC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-
Q 019790          158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL----GA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  230 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-  230 (335)
                       +|. |..++.+++ .|+ +|++++.++...+.+++.    +. +.+.- ..           +...||+|+.+..... 
T Consensus       128 -cGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~-~~-----------~~~~fD~Vvani~~~~~  192 (250)
T PRK00517        128 -CGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYL-PQ-----------GDLKADVIVANILANPL  192 (250)
T ss_pred             -CcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEE-cc-----------CCCCcCEEEEcCcHHHH
Confidence             555 877776555 576 599999999888777642    22 11110 00           1115999998776543 


Q ss_pred             ---HHHhhccccCCCEEEEEecc
Q 019790          231 ---FQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       231 ---~~~~~~~l~~~G~~v~~g~~  250 (335)
                         +..+.+.|+++|+++..|..
T Consensus       193 ~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        193 LELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHhcCCCcEEEEEECc
Confidence               35678889999999987654

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.61  E-value=0.014  Score=52.26  Aligned_cols=172  Identities=15%  Similarity=0.087  Sum_probs=102.6

Q ss_pred             CCCCCCCCCceEEEEEEecCCCCCCCCCCEEEEecCCc---------------------------ceeeEEEecCCceEe
Q 019790           55 KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG---------------------------GYAEKVAVPAGQVLP  107 (335)
Q Consensus        55 ~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g---------------------------~~~~~~~~~~~~~~~  107 (335)
                      ..+-.+|--.+ ++|++  +.++.+.+|.||+|+.+-+                           .|.+|.++..+..+.
T Consensus        28 ~~wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~  104 (314)
T PF11017_consen   28 DGWGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYD  104 (314)
T ss_pred             ccCcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccC
Confidence            33444554444 67777  7888999999999986321                           233343333332221


Q ss_pred             CCCCCChhhhccCcchHHHHHHHHHHhc---CCCCCCEEEEeeccccccccccccchHHHHHHHHHh-hC-CCeEEEEec
Q 019790          108 VPSGVSLKDAAAFPEVACTVWSTVFMTS---HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQ-GVRVFVTAG  182 (335)
Q Consensus       108 ~p~~~~~~~aa~~~~~~~~a~~~l~~~~---~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~-~~-g~~V~~~~~  182 (335)
                      -   -....-+.+...+.|.|..- +..   +.-....|++          ..+++-.++.++..++ .. +.+++.++ 
T Consensus       105 ~---~~e~~~~LlrPLf~Tsfll~-d~l~~~~~~ga~~vvl----------~SASSKTA~glA~~L~~~~~~~~~vglT-  169 (314)
T PF11017_consen  105 P---EREDWQMLLRPLFITSFLLD-DFLFDNDFFGAAQVVL----------SSASSKTAIGLAYCLKKQRGPPKVVGLT-  169 (314)
T ss_pred             c---chhHHHHHHHHHHHHHHHHH-HHhcccccCCccEEEE----------eccchHHHHHHHHHhhccCCCceEEEEe-
Confidence            1   11222344555666666432 222   1233456777          7889999999988888 33 45899988 


Q ss_pred             ChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCC-EEEEEeccC
Q 019790          183 SEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDG-RLFIIGTQG  251 (335)
Q Consensus       183 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G-~~v~~g~~~  251 (335)
                      |+......+.+|. +.++.|++      +..+.. ..--+++|..|+..+ ...-..++..= ..+.+|...
T Consensus       170 S~~N~~Fve~lg~Yd~V~~Yd~------i~~l~~-~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  170 SARNVAFVESLGCYDEVLTYDD------IDSLDA-PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             cCcchhhhhccCCceEEeehhh------hhhccC-CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            6677778888885 56776654      333322 245789999998653 44444454432 445566443

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.54  E-value=0.0081  Score=53.80  Aligned_cols=94  Identities=21%  Similarity=0.322  Sum_probs=69.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+++|          .| .|.+|.+++..++..|++|++..|++++.+.+.+.+...+ .      ...+.+..  ..
T Consensus       150 ~gk~v~I----------iG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~------~~~l~~~l--~~  209 (287)
T TIGR02853       150 HGSNVMV----------LG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P------LNKLEEKV--AE  209 (287)
T ss_pred             CCCEEEE----------Ec-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c------HHHHHHHh--cc
Confidence            4678888          88 7999999999999999999999999887777766664322 1      12233333  25


Q ss_pred             ccEEEeCCChhhH-HHhhccccCCCEEEEEeccCC
Q 019790          219 VDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       219 ~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      +|+||+|++...+ ...+..++++.-++.++..++
T Consensus       210 aDiVint~P~~ii~~~~l~~~k~~aliIDlas~Pg  244 (287)
T TIGR02853       210 IDIVINTIPALVLTADVLSKLPKHAVIIDLASKPG  244 (287)
T ss_pred             CCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCCC
Confidence            8999999987643 446777888887888876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.46  E-value=0.00076  Score=55.99  Aligned_cols=77  Identities=27%  Similarity=0.403  Sum_probs=59.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC---CEEEeCCCcc----HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTED----FVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~----~~~~~~  211 (335)
                      -|.+|||          .||++++|++.++-...+|-+|++..|+++++++++....   ..+.|-.+.+    +.+.++
T Consensus         4 tgnTiLI----------TGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLk   73 (245)
T COG3967           4 TGNTILI----------TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLK   73 (245)
T ss_pred             cCcEEEE----------eCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHH
Confidence            3689999          9999999999999999999999999999999999986432   2344444444    444444


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +...  -.+++++|+|
T Consensus        74 k~~P--~lNvliNNAG   87 (245)
T COG3967          74 KEYP--NLNVLINNAG   87 (245)
T ss_pred             hhCC--chheeeeccc
Confidence            4433  3699999887

>PRK08324 short chain dehydrogenase; Validated

Probab=97.42  E-value=0.00087  Score=67.54  Aligned_cols=115  Identities=21%  Similarity=0.246  Sum_probs=74.3

Q ss_pred             cceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHh
Q 019790           92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK  171 (335)
Q Consensus        92 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~  171 (335)
                      .++++|..+++..++.+ +..+.+++.....          ......+|+++||          +|++|.+|..+++.+.
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLV----------TGasggIG~~la~~L~  443 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALV----------TGAAGGIGKATAKRLA  443 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEE----------ecCCCHHHHHHHHHHH
Confidence            45677887877777766 5566666651100          0122346789999          9999999999999999


Q ss_pred             hCCCeEEEEecChhhHHHHHH-cCC--C---EEEeCCCcc-HHHHHHHHh-CCCcccEEEeCCC
Q 019790          172 CQGVRVFVTAGSEEKLAVCKD-LGA--D---VCINYKTED-FVARVKEET-GGKGVDVILDCMG  227 (335)
Q Consensus       172 ~~g~~V~~~~~~~~~~~~~~~-~g~--~---~~~~~~~~~-~~~~~~~~~-~~~~~d~vid~~g  227 (335)
                      ..|++|++++++.++.+.+.+ ++.  .   ...|-.+.. ..+.+.+.. ..+++|++|+++|
T Consensus       444 ~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        444 AEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             HCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            999999999999887665543 332  1   122333322 222222211 1136999999998

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.36  E-value=0.00022  Score=70.29  Aligned_cols=96  Identities=19%  Similarity=0.256  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC---------------------hhhHHHHHHcC
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------------------EEKLAVCKDLG  194 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~---------------------~~~~~~~~~~g  194 (335)
                      ...+|++|+|          .| .|++|+++++.++.+|++|+++++.                     +.+.+.++++|
T Consensus       133 ~~~~g~~V~V----------IG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~G  201 (564)
T PRK12771        133 APDTGKRVAV----------IG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLG  201 (564)
T ss_pred             CCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCC
Confidence            3578899999          88 6999999999999999999998742                     34566777899


Q ss_pred             CCEEEeCCC-ccH-HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790          195 ADVCINYKT-EDF-VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       195 ~~~~~~~~~-~~~-~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~  247 (335)
                      ++..++... .+. .+.+.     .+||.+|+++|... ....+......|.+..+
T Consensus       202 v~~~~~~~~~~~~~~~~~~-----~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        202 VEVRLGVRVGEDITLEQLE-----GEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             CEEEeCCEECCcCCHHHHH-----hhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence            877666433 221 11211     25999999999753 23334444445544433

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.25  E-value=0.0047  Score=58.54  Aligned_cols=100  Identities=17%  Similarity=0.196  Sum_probs=73.0

Q ss_pred             HHHHHhc-CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790          129 STVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV  207 (335)
Q Consensus       129 ~~l~~~~-~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  207 (335)
                      .++.+.. ..-.|.+++|          .| .|.+|..+++.++..|++|+++.+++.+...+...|+..+      .+.
T Consensus       242 d~~~R~~~~~LaGKtVgV----------IG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~le  304 (476)
T PTZ00075        242 DGIFRATDVMIAGKTVVV----------CG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------TLE  304 (476)
T ss_pred             HHHHHhcCCCcCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------cHH
Confidence            3443433 3457889999          87 7999999999999999999999877766645555565321      122


Q ss_pred             HHHHHHhCCCcccEEEeCCChhhH--HHhhccccCCCEEEEEeccC
Q 019790          208 ARVKEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~  251 (335)
                          +..  +..|+|+.|+|...+  ...+..|++++.++.+|...
T Consensus       305 ----ell--~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        305 ----DVV--ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             ----HHH--hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence                222  258999999987653  46899999999999998664

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.24  E-value=0.0016  Score=57.02  Aligned_cols=81  Identities=23%  Similarity=0.368  Sum_probs=60.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC----CC-EE--EeCCCccHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG----AD-VC--INYKTEDFVAR  209 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g----~~-~~--~~~~~~~~~~~  209 (335)
                      ..+.++||          +|+++++|...+..+-..|++++.+.|++++++.+.+ +.    .. .+  .|..+.+-.+.
T Consensus         4 ~~~~~~lI----------TGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~   73 (265)
T COG0300           4 MKGKTALI----------TGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALER   73 (265)
T ss_pred             CCCcEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHH
Confidence            45678999          9999999999999999999999999999999887753 32    11 12  34444444445


Q ss_pred             HHHHhCC--CcccEEEeCCCh
Q 019790          210 VKEETGG--KGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~--~~~d~vid~~g~  228 (335)
                      +.+.+..  ..+|+.++++|-
T Consensus        74 l~~~l~~~~~~IdvLVNNAG~   94 (265)
T COG0300          74 LEDELKERGGPIDVLVNNAGF   94 (265)
T ss_pred             HHHHHHhcCCcccEEEECCCc
Confidence            5544333  379999999983

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.24  E-value=0.0017  Score=57.29  Aligned_cols=106  Identities=25%  Similarity=0.348  Sum_probs=76.2

Q ss_pred             HHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---E
Q 019790          125 CTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---V  197 (335)
Q Consensus       125 ~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~  197 (335)
                      ..++..+.++.+++||++||=          +|  ++.|.+++.+|+..|++|+.++-|+++.+.+++    .|..   .
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLD----------iG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~  125 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLD----------IG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVE  125 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEE----------eC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccE
Confidence            456666778899999999999          87  778999999999999999999999998877754    4433   1


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEE-----eCCChh----hHHHhhccccCCCEEEEEeccC
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVIL-----DCMGAS----YFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vi-----d~~g~~----~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +.-.+-.+       ..  ..||-|+     +.+|.+    .+..+.+.|+++|++.+.....
T Consensus       126 v~l~d~rd-------~~--e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~  179 (283)
T COG2230         126 VRLQDYRD-------FE--EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG  179 (283)
T ss_pred             EEeccccc-------cc--cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence            21111111       11  1377775     456652    3577889999999997665433

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.15  E-value=0.0031  Score=57.24  Aligned_cols=107  Identities=19%  Similarity=0.325  Sum_probs=73.8

Q ss_pred             ceEeCCCCCChhhhccCcchHHHHHHHHHHhcCC---CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEE
Q 019790          104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFV  179 (335)
Q Consensus       104 ~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~---~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~  179 (335)
                      ..+++|+.+..+.++.. .+...+++++......   .++.+|+|          .| +|.+|..+++.++..|+ +|++
T Consensus       140 ~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~V----------iG-aG~iG~~~a~~L~~~g~~~V~v  207 (311)
T cd05213         140 KAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLV----------IG-AGEMGELAAKHLAAKGVAEITI  207 (311)
T ss_pred             HHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEE----------EC-cHHHHHHHHHHHHHcCCCEEEE
Confidence            45677888888877643 4566666666333221   46889999          88 69999999999998875 7999


Q ss_pred             EecChhhH-HHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          180 TAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       180 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                      +.++.++. +.++++|.. +.+.      +.+.+..  ..+|+||.|+++...
T Consensus       208 ~~r~~~ra~~la~~~g~~-~~~~------~~~~~~l--~~aDvVi~at~~~~~  251 (311)
T cd05213         208 ANRTYERAEELAKELGGN-AVPL------DELLELL--NEADVVISATGAPHY  251 (311)
T ss_pred             EeCCHHHHHHHHHHcCCe-EEeH------HHHHHHH--hcCCEEEECCCCCch
Confidence            99998765 455677763 2321      1222222  248999999998654

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.13  E-value=0.0066  Score=50.24  Aligned_cols=90  Identities=18%  Similarity=0.187  Sum_probs=63.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-----hh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-----SY  230 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-----~~  230 (335)
                      .|++|.+|..+++.+...|.+|++++|++++.+.  ..+.. ++..+-.+. +.+.+...  ++|.||.++|.     ..
T Consensus         4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~-~~~~~al~--~~d~vi~~~~~~~~~~~~   77 (183)
T PF13460_consen    4 FGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFDP-DSVKAALK--GADAVIHAAGPPPKDVDA   77 (183)
T ss_dssp             ETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTCH-HHHHHHHT--TSSEEEECCHSTTTHHHH
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehhh-hhhhhhhh--hcchhhhhhhhhcccccc
Confidence            8999999999999999999999999999998776  33333 333333332 44555554  69999999983     23


Q ss_pred             HHHhhccccCC--CEEEEEeccC
Q 019790          231 FQRNLGSLNID--GRLFIIGTQG  251 (335)
Q Consensus       231 ~~~~~~~l~~~--G~~v~~g~~~  251 (335)
                      ....++.++..  .+++.++...
T Consensus        78 ~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   78 AKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             HHHHHHHHHHTTSSEEEEEEETT
T ss_pred             cccccccccccccccceeeeccc
Confidence            44455555443  3788776554

...

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.12  E-value=0.0059  Score=52.78  Aligned_cols=103  Identities=17%  Similarity=0.264  Sum_probs=66.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc---CCCEEE--eCCCcc-HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCI--NYKTED-FVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~---g~~~~~--~~~~~~-~~~~~~  211 (335)
                      .+++++|          +|++|.+|..+++.+...|++|+++++++++.+.+. +.   +.-..+  |..+.. ..+.+.
T Consensus         4 ~~~~vlI----------tGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   73 (238)
T PRK05786          4 KGKKVAI----------IGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIE   73 (238)
T ss_pred             CCcEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHH
Confidence            4678999          999999999999999999999999999988776552 22   221222  222222 211111


Q ss_pred             HHhC-CCcccEEEeCCChhh------------------------HHHhhccccCCCEEEEEeccC
Q 019790          212 EETG-GKGVDVILDCMGASY------------------------FQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       212 ~~~~-~~~~d~vid~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +... ..++|.++.+.+...                        ++..++.++++|+++.++...
T Consensus        74 ~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~  138 (238)
T PRK05786         74 KAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS  138 (238)
T ss_pred             HHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            1110 135899998887311                        233445566788999887654

>PRK12742 oxidoreductase; Provisional

Probab=97.08  E-value=0.0091  Score=51.55  Aligned_cols=101  Identities=25%  Similarity=0.406  Sum_probs=63.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH-HHcCCCEE-EeCCCcc-HHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KDLGADVC-INYKTED-FVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~-~~~~~~~~~  214 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+.+.+ ++++.+.+ .+.+...+ .|..+.. +.+.+. ..
T Consensus         5 ~~k~vlI----------tGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~-~~   73 (237)
T PRK12742          5 TGKKVLV----------LGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVR-KS   73 (237)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHH-Hh
Confidence            4678999          999999999999999999999988765 44444444 34454332 2332322 222222 21


Q ss_pred             CCCcccEEEeCCChhh-----------H---------------HHhhccccCCCEEEEEeccCC
Q 019790          215 GGKGVDVILDCMGASY-----------F---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       215 ~~~~~d~vid~~g~~~-----------~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                        .++|++|+++|...           +               ......++..|+++.++....
T Consensus        74 --~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  135 (237)
T PRK12742         74 --GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG  135 (237)
T ss_pred             --CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence              36899999886410           0               123344566789998876543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.07  E-value=0.0039  Score=53.44  Aligned_cols=79  Identities=24%  Similarity=0.414  Sum_probs=57.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC----CEEEeCCCc-cHHHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA----DVCINYKTE-DFVARVKEE  213 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~----~~~~~~~~~-~~~~~~~~~  213 (335)
                      +..++|          +|+++++|.+.++.+...|++|+.+.|..++++.+. +++.    ...+|-.+. ...+.+...
T Consensus         6 ~kv~lI----------TGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           6 GKVALI----------TGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CcEEEE----------ecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHH
Confidence            467899          999999999999999999999999999999998886 4662    123344443 222223322


Q ss_pred             hCC-CcccEEEeCCCh
Q 019790          214 TGG-KGVDVILDCMGA  228 (335)
Q Consensus       214 ~~~-~~~d~vid~~g~  228 (335)
                      ... +.+|++++++|-
T Consensus        76 ~~~~g~iDiLvNNAGl   91 (246)
T COG4221          76 PEEFGRIDILVNNAGL   91 (246)
T ss_pred             HHhhCcccEEEecCCC
Confidence            221 369999999984

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.99  E-value=0.0059  Score=57.01  Aligned_cols=111  Identities=22%  Similarity=0.312  Sum_probs=75.4

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +..+....+..+.+..+++++++||.          +|  .+.|..+..+++..|++|++++.+++..+.+++......+
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLD----------IG--cG~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v  215 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLD----------IG--CGWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPV  215 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEE----------eC--CCccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeE
Confidence            33344555666667778899999999          87  4678888899998899999999999999888764322111


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEe-----CCCh----hhHHHhhccccCCCEEEEEe
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILD-----CMGA----SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .....++    .+.  ...||.|+.     .+|.    ..+..+.+.|+|+|+++...
T Consensus       216 ~~~~~D~----~~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        216 EIRLQDY----RDL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             EEEECch----hhc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            1111122    111  236999874     3343    23577888999999998653

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.054  Score=47.41  Aligned_cols=80  Identities=21%  Similarity=0.301  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHH----HHHcCCCE---EEeCCCccHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAV----CKDLGADV---CINYKTEDFVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~----~~~~g~~~---~~~~~~~~~~~~~  210 (335)
                      .+.+++|          .|+++.+|..+++.+...|++ |+++.++.+..+.    ++..+...   ..|..+.+...++
T Consensus         5 ~~k~vlI----------tGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (260)
T PRK06198          5 DGKVALV----------TGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRV   74 (260)
T ss_pred             CCcEEEE----------eCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            4578999          999999999999999999998 9999988665442    22334322   2244333222222


Q ss_pred             HHHhC--CCcccEEEeCCCh
Q 019790          211 KEETG--GKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~--~~~~d~vid~~g~  228 (335)
                      .+...  -.++|.+|.+.|.
T Consensus        75 ~~~~~~~~g~id~li~~ag~   94 (260)
T PRK06198         75 VAAADEAFGRLDALVNAAGL   94 (260)
T ss_pred             HHHHHHHhCCCCEEEECCCc
Confidence            22110  1268999999874

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.87  E-value=0.00076  Score=59.88  Aligned_cols=100  Identities=26%  Similarity=0.400  Sum_probs=63.1

Q ss_pred             HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--CEEEeC
Q 019790          128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DVCINY  201 (335)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~~~~~~  201 (335)
                      +..+.+..++++|++||-          +|  ++.|..+..+++..|++|+.++.++++.+.+++    .|.  ...+..
T Consensus        51 ~~~~~~~~~l~~G~~vLD----------iG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~  118 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLD----------IG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRL  118 (273)
T ss_dssp             HHHHHTTTT--TT-EEEE----------ES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE
T ss_pred             HHHHHHHhCCCCCCEEEE----------eC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence            344557889999999999          87  558999999999999999999999999888753    442  121211


Q ss_pred             CCccHHHHHHHHhCCCcccEEEe-----CCChh----hHHHhhccccCCCEEEEE
Q 019790          202 KTEDFVARVKEETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      .  ++    ++...  +||.|+.     .+|..    .+..+.+.|+|+|++++-
T Consensus       119 ~--D~----~~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  119 Q--DY----RDLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             S---G----GG-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             e--ec----cccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            1  11    22221  7998864     55543    257788999999999754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK06182 short chain dehydrogenase; Validated

Probab=96.84  E-value=0.015  Score=51.58  Aligned_cols=80  Identities=26%  Similarity=0.309  Sum_probs=55.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccH-HHHHHHHh-C
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDF-VARVKEET-G  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~~~~~-~  215 (335)
                      ++.+++|          +|++|.+|..+++.+...|++|+++++++++.+.+...+... ..|-.+... ...+.+.. .
T Consensus         2 ~~k~vlI----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   71 (273)
T PRK06182          2 QKKVALV----------TGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAE   71 (273)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHh
Confidence            3568899          999999999999999889999999999988777665544433 234444322 22222211 1


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                      ..++|++|+++|.
T Consensus        72 ~~~id~li~~ag~   84 (273)
T PRK06182         72 EGRIDVLVNNAGY   84 (273)
T ss_pred             cCCCCEEEECCCc
Confidence            2368999999873

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.01  Score=52.70  Aligned_cols=76  Identities=29%  Similarity=0.408  Sum_probs=54.0

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHh--CCCc
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKG  218 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~  218 (335)
                      ++||          +|++|.+|..+++.+...|++|++++++.++.+.+...+...+ .|..+....+.+.+..  ...+
T Consensus         3 ~vlI----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   72 (274)
T PRK05693          3 VVLI----------TGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGG   72 (274)
T ss_pred             EEEE----------ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            6888          9999999999999999999999999999887776665554332 3544433222222211  1236


Q ss_pred             ccEEEeCCC
Q 019790          219 VDVILDCMG  227 (335)
Q Consensus       219 ~d~vid~~g  227 (335)
                      +|++|+++|
T Consensus        73 id~vi~~ag   81 (274)
T PRK05693         73 LDVLINNAG   81 (274)
T ss_pred             CCEEEECCC
Confidence            899999998

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=96.81  E-value=0.0089  Score=53.64  Aligned_cols=145  Identities=11%  Similarity=0.063  Sum_probs=79.9

Q ss_pred             CCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHH--HHHHHhcCCCCCCEEEEeecccccccc
Q 019790           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~--~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      .+.+|++.+....   |.++..-+....+.+.+++.+..+.    ...|..  ..+..  ...++++||-          
T Consensus       105 p~~~g~~~~i~p~---w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l~l~~l~~--~~~~g~~VLD----------  165 (288)
T TIGR00406       105 PVQFGKRFWICPS---WRDVPSDEDALIIMLDPGLAFGTGT----HPTTSLCLEWLED--LDLKDKNVID----------  165 (288)
T ss_pred             CEEEcCeEEEECC---CcCCCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHh--hcCCCCEEEE----------
Confidence            3667776655532   3222111233445555554443322    222222  12211  2356788888          


Q ss_pred             ccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc----CCC-EEEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      .| +|. |..++.+++ +|+ +|++++.++...+.+++.    +.. .+.... .+    ..... ..+||+|+.+....
T Consensus       166 vG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~----~~~~~-~~~fDlVvan~~~~  236 (288)
T TIGR00406       166 VG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IY----LEQPI-EGKADVIVANILAE  236 (288)
T ss_pred             eC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-cc----ccccc-CCCceEEEEecCHH
Confidence            77 455 877777766 465 899999998877776542    211 111111 10    11111 24799999876544


Q ss_pred             h----HHHhhccccCCCEEEEEecc
Q 019790          230 Y----FQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       230 ~----~~~~~~~l~~~G~~v~~g~~  250 (335)
                      .    +..+.+.|+++|.++..|..
T Consensus       237 ~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       237 VIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            2    35678899999999887643

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.77  E-value=0.011  Score=52.55  Aligned_cols=78  Identities=29%  Similarity=0.464  Sum_probs=55.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHH-HHHH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFV-ARVK---EE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~-~~~~---~~  213 (335)
                      .+.++||          +|++|.+|.++++.+...|++|++++++++..+.+.+.+...+ .|..+.... ..+.   +.
T Consensus         3 ~~k~vlI----------tGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   72 (277)
T PRK05993          3 MKRSILI----------TGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLEL   72 (277)
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999          9999999999999998899999999999888877766554432 344443222 2222   22


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .+ ..+|++++++|
T Consensus        73 ~~-g~id~li~~Ag   85 (277)
T PRK05993         73 SG-GRLDALFNNGA   85 (277)
T ss_pred             cC-CCccEEEECCC
Confidence            22 36899999876

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.015  Score=50.48  Aligned_cols=78  Identities=24%  Similarity=0.368  Sum_probs=54.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE-EeCCCccHHHHHHHHhCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~  216 (335)
                      .+.+++|          .|++|.+|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+......+.+.  .
T Consensus         8 ~~~~~lI----------tGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~   75 (245)
T PRK07060          8 SGKSVLV----------TGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAA--A   75 (245)
T ss_pred             CCCEEEE----------eCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHH--h
Confidence            4578999          9999999999999999999999999998877665543 343322 233332222222222  2


Q ss_pred             CcccEEEeCCCh
Q 019790          217 KGVDVILDCMGA  228 (335)
Q Consensus       217 ~~~d~vid~~g~  228 (335)
                      .++|++|.+.|.
T Consensus        76 ~~~d~vi~~ag~   87 (245)
T PRK07060         76 GAFDGLVNCAGI   87 (245)
T ss_pred             CCCCEEEECCCC
Confidence            368999998873

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.73  E-value=0.0035  Score=60.01  Aligned_cols=96  Identities=18%  Similarity=0.183  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEE----EeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHH
Q 019790          133 MTSHLSPGESFL----VDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFV  207 (335)
Q Consensus       133 ~~~~~~~~~~vl----i~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~  207 (335)
                      ...++++|+++|    +          ++++|++|.+++++++..|++|+.+.+.+.+....+..+.+ .++|.+...+.
T Consensus        27 ~l~~~~~~~~~~~~~~l----------~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   96 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVL----------VGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDP   96 (450)
T ss_pred             cccCCCCCCCCCCCceE----------EccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCH
Confidence            445678899888    8          88899999999999999999999988665533333333333 35555544444


Q ss_pred             HHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCC
Q 019790          208 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      +.+....              ..+...++.|.++|+++.++....
T Consensus        97 ~~l~~~~--------------~~~~~~l~~l~~~griv~i~s~~~  127 (450)
T PRK08261         97 ADLKALY--------------EFFHPVLRSLAPCGRVVVLGRPPE  127 (450)
T ss_pred             HHHHHHH--------------HHHHHHHHhccCCCEEEEEccccc
Confidence            4443321              234566788888999998876543

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0096  Score=54.55  Aligned_cols=79  Identities=29%  Similarity=0.449  Sum_probs=54.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~  211 (335)
                      .+.++||          +|+++++|.++++.+...|++|+++.+++++.+.+    ++.+....   .|-.+.+..+.+.
T Consensus         6 ~~k~vlI----------TGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~   75 (330)
T PRK06139          6 HGAVVVI----------TGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALA   75 (330)
T ss_pred             CCCEEEE----------cCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            4678999          99999999999999999999999999998876544    33454332   2333322222222


Q ss_pred             HHh--CCCcccEEEeCCC
Q 019790          212 EET--GGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~--~~~~~d~vid~~g  227 (335)
                      +..  ...++|++|+|+|
T Consensus        76 ~~~~~~~g~iD~lVnnAG   93 (330)
T PRK06139         76 TQAASFGGRIDVWVNNVG   93 (330)
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            111  1136999999987

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.68  E-value=0.019  Score=55.90  Aligned_cols=83  Identities=17%  Similarity=0.251  Sum_probs=57.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--------CC-----CEE
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--------GA-----DVC  198 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--------g~-----~~~  198 (335)
                      ...+.+.|.++||          .||+|.+|..+++.+...|++|++++|+.++.+.+.+ +        |.     -.+
T Consensus        73 ~~~~~~~gKvVLV----------TGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~i  142 (576)
T PLN03209         73 KELDTKDEDLAFV----------AGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEI  142 (576)
T ss_pred             cccccCCCCEEEE----------ECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEE
Confidence            3456678899999          9999999999999999899999999999887654422 1        11     111


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +..+-.+ .+.+.+..+  ++|+||.|+|.
T Consensus       143 V~gDLtD-~esI~~aLg--giDiVVn~AG~  169 (576)
T PLN03209        143 VECDLEK-PDQIGPALG--NASVVICCIGA  169 (576)
T ss_pred             EEecCCC-HHHHHHHhc--CCCEEEEcccc
Confidence            2111122 233444443  58999999875

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.63  E-value=0.03  Score=45.25  Aligned_cols=110  Identities=16%  Similarity=0.188  Sum_probs=69.1

Q ss_pred             HHHHHHhc-CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          128 WSTVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       128 ~~~l~~~~-~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      +.++.+.. -.-.|.+++|          .| -|.+|.-.++.++.+|++|++++.++-+.-++..-|....        
T Consensus        10 ~d~i~r~t~~~l~Gk~vvV----------~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~--------   70 (162)
T PF00670_consen   10 VDGIMRATNLMLAGKRVVV----------IG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM--------   70 (162)
T ss_dssp             HHHHHHHH-S--TTSEEEE----------E---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE--------
T ss_pred             HHHHHhcCceeeCCCEEEE----------eC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec--------
Confidence            33443343 3457888888          77 8999999999999999999999999988777776676432        


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCCCEEEEEeccCCCccccChhHHh
Q 019790          207 VARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF  263 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  263 (335)
                        .+.+..  ...|++|.++|...  ..+-++.|+++--+..+|...   .+++...+.
T Consensus        71 --~~~~a~--~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d---~Eid~~~L~  122 (162)
T PF00670_consen   71 --TLEEAL--RDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFD---VEIDVDALE  122 (162)
T ss_dssp             ---HHHHT--TT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST---TSBTHHHHH
T ss_pred             --CHHHHH--hhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCc---eeEeecccc
Confidence              122333  25799999999865  356678888777666665433   345554443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.57  E-value=0.0097  Score=46.94  Aligned_cols=73  Identities=15%  Similarity=0.260  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCCC--EEEeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~  214 (335)
                      .+.+++|          .| +|.+|.+++..+...|+ +|+++.|+.++.+.+. .++..  ...+..+.  .    +..
T Consensus        11 ~~~~vlv----------iG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~--~----~~~   73 (135)
T PF01488_consen   11 KGKRVLV----------IG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL--E----EAL   73 (135)
T ss_dssp             TTSEEEE----------ES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH--C----HHH
T ss_pred             CCCEEEE----------EC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH--H----HHH
Confidence            4678888          88 69999999999999999 5999999998877765 45322  23333221  1    111


Q ss_pred             CCCcccEEEeCCChhh
Q 019790          215 GGKGVDVILDCMGASY  230 (335)
Q Consensus       215 ~~~~~d~vid~~g~~~  230 (335)
                        ..+|+||+|++...
T Consensus        74 --~~~DivI~aT~~~~   87 (135)
T PF01488_consen   74 --QEADIVINATPSGM   87 (135)
T ss_dssp             --HTESEEEE-SSTTS
T ss_pred             --hhCCeEEEecCCCC
Confidence              25999999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.028  Score=49.51  Aligned_cols=78  Identities=19%  Similarity=0.266  Sum_probs=52.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCcc-HHH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTED-FVA---RV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~-~~~---~~  210 (335)
                      .+.++||          .|+++.+|.+++..+...|++|++++++.++.+.+. +++... .  .|..+.. +.+   .+
T Consensus         5 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          5 AGKVAIV----------TGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHH
Confidence            3578999          999999999999999999999999999887655543 344321 1  2333322 222   22


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|+++.++|.
T Consensus        75 ~~~~--g~id~lv~~ag~   90 (261)
T PRK08265         75 VARF--GRVDILVNLACT   90 (261)
T ss_pred             HHHh--CCCCEEEECCCC
Confidence            2222  368999998873

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.028  Score=48.80  Aligned_cols=80  Identities=20%  Similarity=0.268  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~  211 (335)
                      ++.+++|          +|++|.+|..++..+...|++|+++.+++++.+...    ..+... .+  |-.+......+.
T Consensus         6 ~~~~vlI----------tGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (250)
T PRK12939          6 AGKRALV----------TGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFF   75 (250)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4678999          999999999999999999999999998877655442    223222 22  333322222222


Q ss_pred             HHh--CCCcccEEEeCCCh
Q 019790          212 EET--GGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~--~~~~~d~vid~~g~  228 (335)
                      +..  ...++|++|.++|.
T Consensus        76 ~~~~~~~~~id~vi~~ag~   94 (250)
T PRK12939         76 DAAAAALGGLDGLVNNAGI   94 (250)
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            211  11369999999874

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=96.52  E-value=0.048  Score=46.00  Aligned_cols=99  Identities=15%  Similarity=0.243  Sum_probs=65.4

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHH----HcC-CCEEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLG-ADVCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~  205 (335)
                      ...++.+++++|.          .| +|. |..++.+++..+  .+|++++.+++..+.++    .++ .+.+... ..+
T Consensus        34 ~~l~~~~~~~vlD----------lG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~-~~d  100 (198)
T PRK00377         34 SKLRLRKGDMILD----------IG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLI-KGE  100 (198)
T ss_pred             HHcCCCCcCEEEE----------eC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEE-Eec
Confidence            4567889999998          77 555 888888888764  58999999988877654    345 2222111 112


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790          206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (335)
                      ..+.+.. .. ..||.||...+.    ..+..+.+.|+++|+++.
T Consensus       101 ~~~~l~~-~~-~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        101 APEILFT-IN-EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             hhhhHhh-cC-CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            2222222 22 369999986553    235677889999999975

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.039  Score=47.93  Aligned_cols=101  Identities=19%  Similarity=0.289  Sum_probs=60.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHH----HHcCCCE-E--EeCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVC----KDLGADV-C--INYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~----~~~g~~~-~--~~~~~~~-~~~~  209 (335)
                      .+.++||          +|++|.+|..++..+...|++|+++.++.. +.+.+    +..+... .  .|..+.+ ....
T Consensus         5 ~~k~vlI----------tGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (248)
T PRK07806          5 PGKTALV----------TGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAAL   74 (248)
T ss_pred             CCcEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            3568999          999999999999999889999999888643 22222    2223222 1  2333322 2222


Q ss_pred             HHHHhC-CCcccEEEeCCChh--------------------hHHHhhccccCCCEEEEEec
Q 019790          210 VKEETG-GKGVDVILDCMGAS--------------------YFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       210 ~~~~~~-~~~~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~  249 (335)
                      +.+... ..++|+++.++|..                    .+..+.+.+..+|+++.++.
T Consensus        75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         75 MDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             HHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            222111 13589999877532                    12334455556789988865

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.017  Score=49.55  Aligned_cols=73  Identities=15%  Similarity=0.174  Sum_probs=50.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .|++|.+|...+..+...|++|+++++++++.+.+++++....  .|-.+....+.+.+...+.++|++|.++|.
T Consensus         7 tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          7 IGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             eCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            9999999999999888899999999998877666655432222  233333333344444444579999988753

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.46  E-value=0.015  Score=55.24  Aligned_cols=143  Identities=15%  Similarity=0.244  Sum_probs=90.0

Q ss_pred             CCCCCceEEEEEEecCCCCCCCCCCEE-EEec----------------CCcceeeEEEecCCceEeCCCCCChhhhccCc
Q 019790           59 PYPGLECSGTILSVGKNVSRWKVGDQV-CALL----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP  121 (335)
Q Consensus        59 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V-~~~~----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~  121 (335)
                      ..-|+|+++-+.+|+++.+..-+|+.= ++-+                .++.|++.        ++.|+.+..+.+ ...
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~  160 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGA  160 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCC
Confidence            346999999999999988765555542 1111                11223332        333443333322 233


Q ss_pred             chHHHHHHHHHHhcC---CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHH-HHHHcCCC
Q 019790          122 EVACTVWSTVFMTSH---LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGAD  196 (335)
Q Consensus       122 ~~~~~a~~~l~~~~~---~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~-~~~~~g~~  196 (335)
                      .+.+.+++++.....   -.++.+++|          .| +|.+|.++++.++..|+ +|+++.++.++.+ .++.+|..
T Consensus       161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlV----------iG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~  229 (423)
T PRK00045        161 GAVSVASAAVELAKQIFGDLSGKKVLV----------IG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE  229 (423)
T ss_pred             CCcCHHHHHHHHHHHhhCCccCCEEEE----------EC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc
Confidence            355566666633322   256789999          87 79999999999999998 8999999988765 45567753


Q ss_pred             EEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          197 VCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                       +++.      ..+.+..  .++|+||+|+|+..
T Consensus       230 -~~~~------~~~~~~l--~~aDvVI~aT~s~~  254 (423)
T PRK00045        230 -AIPL------DELPEAL--AEADIVISSTGAPH  254 (423)
T ss_pred             -EeeH------HHHHHHh--ccCCEEEECCCCCC
Confidence             2221      1222222  25899999999753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.42  E-value=0.04  Score=48.83  Aligned_cols=103  Identities=23%  Similarity=0.357  Sum_probs=68.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-EE----eCCCcc-HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI----NYKTED-FVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~~----~~~~~~-~~~  208 (335)
                      .+..|+|          +|+++++|.+++.-+-..|++++.+.+..++++.+    ++.+... ++    |-.+.+ ...
T Consensus        11 ~~kvVvI----------TGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~   80 (282)
T KOG1205|consen   11 AGKVVLI----------TGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKK   80 (282)
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHH
Confidence            4678999          99999999998888888899999998888877666    3333322 21    222222 221


Q ss_pred             ---HHHHHhCCCcccEEEeCCChh--------------------------hHHHhhccccCC--CEEEEEeccCCC
Q 019790          209 ---RVKEETGGKGVDVILDCMGAS--------------------------YFQRNLGSLNID--GRLFIIGTQGGA  253 (335)
Q Consensus       209 ---~~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~  253 (335)
                         .+....  +++|+.++++|-.                          ....+++.|++.  |+|+.+++..+.
T Consensus        81 ~~~~~~~~f--g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~  154 (282)
T KOG1205|consen   81 FVEWAIRHF--GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK  154 (282)
T ss_pred             HHHHHHHhc--CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence               222222  4799999988732                          013456666543  999999877764

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.39  E-value=0.0078  Score=51.43  Aligned_cols=97  Identities=21%  Similarity=0.125  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~  204 (335)
                      ....++++++||-          .|  ++.|..+..+++..+  .+|+.++.+++..+.+++    .+...  +...+..
T Consensus        70 ~~l~~~~g~~VLd----------IG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~  137 (212)
T PRK13942         70 ELLDLKEGMKVLE----------IG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT  137 (212)
T ss_pred             HHcCCCCcCEEEE----------EC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc
Confidence            5567889999999          77  556778888888765  589999999887776653    34322  2222211


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEE
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  247 (335)
                      .      ......+||.|+-..... .....++.|+++|+++..
T Consensus       138 ~------~~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        138 L------GYEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             c------CCCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            1      011235799997654433 346678899999998765

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.04  Score=50.59  Aligned_cols=78  Identities=19%  Similarity=0.272  Sum_probs=53.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccHHHHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV-  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~-  210 (335)
                      .+.+++|          +|+++.+|.++++.+...|++|+++++++++.+.+.    +.+....   .|..+....+.+ 
T Consensus         7 ~~k~vlI----------TGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~   76 (334)
T PRK07109          7 GRQVVVI----------TGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAA   76 (334)
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHH
Confidence            4568999          999999999999999999999999999887665442    3444332   233332222222 


Q ss_pred             ---HHHhCCCcccEEEeCCCh
Q 019790          211 ---KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ---~~~~~~~~~d~vid~~g~  228 (335)
                         .+..  .++|++|+++|.
T Consensus        77 ~~~~~~~--g~iD~lInnAg~   95 (334)
T PRK07109         77 DRAEEEL--GPIDTWVNNAMV   95 (334)
T ss_pred             HHHHHHC--CCCCEEEECCCc
Confidence               2222  368999999874

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.30  E-value=0.023  Score=42.77  Aligned_cols=92  Identities=24%  Similarity=0.300  Sum_probs=60.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHh-hCCCeEEEEecChhhHHHHHHc----C--CCEEEeCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDL----G--ADVCINYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~-~~g~~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~~~~~  211 (335)
                      |+.+||-          .|  .+.|..+..+++ ..+++|++++.+++..+.+++.    +  ....+-..  ++ .  .
T Consensus         1 p~~~vLD----------lG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~--d~-~--~   63 (112)
T PF12847_consen    1 PGGRVLD----------LG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG--DA-E--F   63 (112)
T ss_dssp             TTCEEEE----------ET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES--CC-H--G
T ss_pred             CCCEEEE----------Ec--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC--cc-c--c
Confidence            5677877          76  456888888888 4689999999999988877642    1  22222222  11 1  1


Q ss_pred             HHhCCCcccEEEeCC-Chh----------hHHHhhccccCCCEEEEE
Q 019790          212 EETGGKGVDVILDCM-GAS----------YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       212 ~~~~~~~~d~vid~~-g~~----------~~~~~~~~l~~~G~~v~~  247 (335)
                      ......+||+|+... ...          .+..+.+.|+|+|+++.-
T Consensus        64 ~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   64 DPDFLEPFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             GTTTSSCEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CcccCCCCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            122234699999877 221          156778899999998753

...

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.024  Score=49.69  Aligned_cols=81  Identities=30%  Similarity=0.333  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC--E--EEeCCCccHH---
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--V--CINYKTEDFV---  207 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~--~--~~~~~~~~~~---  207 (335)
                      ...++.++||          .|++|.+|..++..+...|++|+++.++++..+.+.+ ....  .  ..|..+....   
T Consensus         7 ~~~~~~~vlI----------tGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (264)
T PRK12829          7 KPLDGLRVLV----------TGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERV   76 (264)
T ss_pred             hccCCCEEEE----------eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHH
Confidence            3356789999          9999999999999999999999999998776665543 2211  1  1233332211   


Q ss_pred             -HHHHHHhCCCcccEEEeCCCh
Q 019790          208 -ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g~  228 (335)
                       +.+.+..  .++|.||.++|.
T Consensus        77 ~~~~~~~~--~~~d~vi~~ag~   96 (264)
T PRK12829         77 FDTAVERF--GGLDVLVNNAGI   96 (264)
T ss_pred             HHHHHHHh--CCCCEEEECCCC
Confidence             1222222  368999998874

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.025  Score=50.89  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=54.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--CEE---EeCCCcc-H---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC---INYKTED-F---VA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~~~---~~~~~~~-~---~~  208 (335)
                      ++.++||          +|+++++|.++++.+...|++|+++++++++.+.+. +++.  ...   .|-.+.. .   .+
T Consensus         8 ~gk~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~   77 (296)
T PRK05872          8 AGKVVVV----------TGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAE   77 (296)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHH
Confidence            4678999          999999999999999999999999999988766553 3432  111   2333322 1   12


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+..  .++|++|+++|.
T Consensus        78 ~~~~~~--g~id~vI~nAG~   95 (296)
T PRK05872         78 EAVERF--GGIDVVVANAGI   95 (296)
T ss_pred             HHHHHc--CCCCEEEECCCc
Confidence            222222  369999999984

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.041  Score=47.04  Aligned_cols=73  Identities=27%  Similarity=0.377  Sum_probs=50.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +|++|.+|..+++.+...|++|++++++.+..+.++..+... ..|-.+....+.+.+...+.++|+++.+.|.
T Consensus         7 tG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          7 VGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             EcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            999999999999988888999999999888777766555432 2333333322333333334479999998764

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.17  E-value=0.039  Score=49.01  Aligned_cols=92  Identities=18%  Similarity=0.257  Sum_probs=66.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCC---Chh--
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCM---GAS--  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~---g~~--  229 (335)
                      +| .|.+|.-++.+|..+|++|++.+.|..|++.+..+-..++ .-+.+.   ..+.+..  +..|++|.++   |.+  
T Consensus       174 iG-GGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v--~~aDlvIgaVLIpgakaP  247 (371)
T COG0686         174 LG-GGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAV--KKADLVIGAVLIPGAKAP  247 (371)
T ss_pred             EC-CccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHh--hhccEEEEEEEecCCCCc
Confidence            45 5999999999999999999999999999999986443332 222322   2333332  3589999865   222  


Q ss_pred             --hHHHhhccccCCCEEEEEeccCCC
Q 019790          230 --YFQRNLGSLNIDGRLFIIGTQGGA  253 (335)
Q Consensus       230 --~~~~~~~~l~~~G~~v~~g~~~~~  253 (335)
                        .+++.+..|++++.++.+....+.
T Consensus       248 kLvt~e~vk~MkpGsVivDVAiDqGG  273 (371)
T COG0686         248 KLVTREMVKQMKPGSVIVDVAIDQGG  273 (371)
T ss_pred             eehhHHHHHhcCCCcEEEEEEEcCCC
Confidence              257789999999999988665554

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.16  E-value=0.031  Score=50.95  Aligned_cols=79  Identities=25%  Similarity=0.371  Sum_probs=55.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCCCE----EEeCCC--ccHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADV----CINYKT--EDFV  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~~~----~~~~~~--~~~~  207 (335)
                      .|.+++|          +|+++++|.+.+..+...|++|++++|++++.+.+.+     .+...    ..|-.+  .+..
T Consensus        52 ~g~~~lI----------TGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~  121 (320)
T PLN02780         52 YGSWALV----------TGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGV  121 (320)
T ss_pred             cCCEEEE----------eCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHH
Confidence            5789999          9999999999999888889999999999887765432     11111    224332  2233


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..++..+|++++++|
T Consensus       122 ~~l~~~~~~~didilVnnAG  141 (320)
T PLN02780        122 KRIKETIEGLDVGVLINNVG  141 (320)
T ss_pred             HHHHHHhcCCCccEEEEecC
Confidence            45555555445679999876

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.16  E-value=0.032  Score=49.06  Aligned_cols=79  Identities=27%  Similarity=0.350  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-CCCE-EE--eCCCcc-HHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADV-CI--NYKTED-FVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-g~~~-~~--~~~~~~-~~~~~~~~  213 (335)
                      .+.+++|          .|+++.+|.++++.+...|++|+++.++.++.+.+.+. +... .+  |-.+.. ..+.+.+.
T Consensus         4 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (262)
T TIGR03325         4 KGEVVLV----------TGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARC   73 (262)
T ss_pred             CCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHH
Confidence            4678999          99999999999999999999999999988777666543 3221 12  332221 22222221


Q ss_pred             hC-CCcccEEEeCCC
Q 019790          214 TG-GKGVDVILDCMG  227 (335)
Q Consensus       214 ~~-~~~~d~vid~~g  227 (335)
                      .. -.++|+++.+.|
T Consensus        74 ~~~~g~id~li~~Ag   88 (262)
T TIGR03325        74 VAAFGKIDCLIPNAG   88 (262)
T ss_pred             HHHhCCCCEEEECCC
Confidence            11 136899999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.16  E-value=0.15  Score=42.52  Aligned_cols=99  Identities=18%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARV  210 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~  210 (335)
                      ...++++++||.          .| +|+-+. +..+++..  ..+|++++.++..    ...+...+ .|..+....+.+
T Consensus        27 ~~~i~~g~~VLD----------iG-~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l   90 (188)
T TIGR00438        27 FKLIKPGDTVLD----------LG-AAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKI   90 (188)
T ss_pred             hcccCCCCEEEE----------ec-CCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHH
Confidence            456689999999          87 444444 44444443  3489999988754    11233222 233333334455


Q ss_pred             HHHhCCCcccEEEe-CC----Ch-------------hhHHHhhccccCCCEEEEEe
Q 019790          211 KEETGGKGVDVILD-CM----GA-------------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       211 ~~~~~~~~~d~vid-~~----g~-------------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .+.....++|+|+. ..    |.             ..+..+.+.|+++|+++...
T Consensus        91 ~~~~~~~~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438        91 RERVGDDKVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             HHHhCCCCccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            56666668999995 21    21             23566788999999998754

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.12  E-value=0.043  Score=46.60  Aligned_cols=97  Identities=20%  Similarity=0.116  Sum_probs=63.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC---EEEeCCC
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD---VCINYKT  203 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~  203 (335)
                      ....+.++++||-          .|  ++.|..+..+++..+  .+|+.++.+++..+.+++    .+..   .++..+.
T Consensus        66 ~~l~~~~~~~VLD----------iG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~  133 (205)
T PRK13944         66 ELIEPRPGMKILE----------VG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG  133 (205)
T ss_pred             HhcCCCCCCEEEE----------EC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc
Confidence            5566788899888          77  456777777787764  589999999887666543    3422   2222221


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~  247 (335)
                      ..   .+   ....+||.|+-+..... .....+.|+++|+++..
T Consensus       134 ~~---~~---~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        134 KR---GL---EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             cc---CC---ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            11   11   11247999987766544 35678999999999764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.10  E-value=0.069  Score=51.12  Aligned_cols=79  Identities=25%  Similarity=0.416  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh--hhHHHH-HHcCCCE-EEeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGADV-CINYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~  214 (335)
                      ++.++||          +|+++.+|..+++.+...|++|+++.++.  +..+.+ .+++... ..|..+....+.+.+..
T Consensus       209 ~g~~vlI----------tGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        209 AGKVALV----------TGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHL  278 (450)
T ss_pred             CCCEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHH
Confidence            4678999          99999999999999999999999988743  233332 3445332 23544433223333222


Q ss_pred             C--CCcccEEEeCCC
Q 019790          215 G--GKGVDVILDCMG  227 (335)
Q Consensus       215 ~--~~~~d~vid~~g  227 (335)
                      .  ..++|++|.++|
T Consensus       279 ~~~~g~id~vi~~AG  293 (450)
T PRK08261        279 AERHGGLDIVVHNAG  293 (450)
T ss_pred             HHhCCCCCEEEECCC
Confidence            1  126899999987

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.046  Score=49.11  Aligned_cols=80  Identities=29%  Similarity=0.417  Sum_probs=52.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~~  211 (335)
                      .+.++||          +||+|.+|.++++.+...|++|++++++.++.+.+.+    .+... .  .|-.+......+.
T Consensus        39 ~~k~vlI----------tGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  108 (293)
T PRK05866         39 TGKRILL----------TGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALV  108 (293)
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            3568999          9999999999999998899999999999877655432    23221 2  2333322222222


Q ss_pred             HHh--CCCcccEEEeCCCh
Q 019790          212 EET--GGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~--~~~~~d~vid~~g~  228 (335)
                      +..  ...++|+++.|+|.
T Consensus       109 ~~~~~~~g~id~li~~AG~  127 (293)
T PRK05866        109 ADVEKRIGGVDILINNAGR  127 (293)
T ss_pred             HHHHHHcCCCCEEEECCCC
Confidence            211  11368999999874

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.038  Score=48.54  Aligned_cols=82  Identities=24%  Similarity=0.371  Sum_probs=53.1

Q ss_pred             CCCCCEEEEeeccccccccccccc-hHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCCCEE--E--eCCCccH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC--I--NYKTEDF  206 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g-~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~~~~--~--~~~~~~~  206 (335)
                      +.++.++||          +|++| ++|.++++.+...|++|+++++++++.+...+     .+...+  +  |..+.+.
T Consensus        14 ~~~~k~vlI----------tG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~   83 (262)
T PRK07831         14 LLAGKVVLV----------TAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQ   83 (262)
T ss_pred             ccCCCEEEE----------ECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHH
Confidence            345788999          99886 89999999999999999999988776544432     343222  2  3333222


Q ss_pred             HHHHHHHh--CCCcccEEEeCCCh
Q 019790          207 VARVKEET--GGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~--~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  ...++|++|.++|.
T Consensus        84 ~~~~~~~~~~~~g~id~li~~ag~  107 (262)
T PRK07831         84 VDALIDAAVERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            22222211  11368999999983

>PRK08017 oxidoreductase; Provisional

Probab=96.03  E-value=0.043  Score=47.92  Aligned_cols=76  Identities=25%  Similarity=0.301  Sum_probs=53.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCcc-H---HHHHHHHhC
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTED-F---VARVKEETG  215 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~-~---~~~~~~~~~  215 (335)
                      .++||          +|++|.+|.++++.+...|++|+++.++.++.+.+++.+...+ .|..+.. .   .+.+.+...
T Consensus         3 k~vlV----------tGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   72 (256)
T PRK08017          3 KSVLI----------TGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTD   72 (256)
T ss_pred             CEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcC
Confidence            46888          9999999999999999999999999999988877776665432 2333322 1   122222222


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                       .++|.++.+.|
T Consensus        73 -~~~~~ii~~ag   83 (256)
T PRK08017         73 -NRLYGLFNNAG   83 (256)
T ss_pred             -CCCeEEEECCC
Confidence             36788888876

>PRK06484 short chain dehydrogenase; Validated

Probab=96.02  E-value=0.061  Score=52.45  Aligned_cols=104  Identities=16%  Similarity=0.248  Sum_probs=67.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE---EEeCCCcc-HHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV---CINYKTED-FVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~-~~~~~~~~  213 (335)
                      .+.++||          +|+++++|.++++.+...|++|+++.+++++.+.+.+ .+...   ..|-.+.. ..+.+.+.
T Consensus       268 ~~k~~lI----------tGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  337 (520)
T PRK06484        268 SPRVVAI----------TGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQI  337 (520)
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHH
Confidence            4667899          9999999999999999999999999998887766653 44322   22333322 22222221


Q ss_pred             h-CCCcccEEEeCCChh------------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          214 T-GGKGVDVILDCMGAS------------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       214 ~-~~~~~d~vid~~g~~------------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      . ..+++|++|.|+|..            .+               +.++..++.+|+++.++....
T Consensus       338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~  404 (520)
T PRK06484        338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS  404 (520)
T ss_pred             HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence            1 113689999988731            01               223445566799998876543

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.01  E-value=0.0019  Score=54.95  Aligned_cols=99  Identities=23%  Similarity=0.252  Sum_probs=64.3

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHH----HcCCC-EEEeCCCc
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGAD-VCINYKTE  204 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~----~~g~~-~~~~~~~~  204 (335)
                      .....+++|++||.          .|  ++.|..++-+++..|.  +|+.+.+.++-.+.++    .++.+ ..+...+.
T Consensus        65 l~~L~l~pg~~VLe----------IG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg  132 (209)
T PF01135_consen   65 LEALDLKPGDRVLE----------IG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG  132 (209)
T ss_dssp             HHHTTC-TT-EEEE----------ES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G
T ss_pred             HHHHhcCCCCEEEE----------ec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch
Confidence            36677999999998          77  5568888888888775  6899998877555554    34543 22222221


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEE
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  247 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (335)
                      .     .-+....+||.|+-+.+-... ...+++|+++|+++..
T Consensus       133 ~-----~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  133 S-----EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             G-----GTTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             h-----hccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            1     111123589999998887655 5678999999999875

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06128 oxidoreductase; Provisional

Probab=96.01  E-value=0.098  Score=47.10  Aligned_cols=102  Identities=22%  Similarity=0.345  Sum_probs=62.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh--hH----HHHHHcCCCEE-E--eCCCccH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KL----AVCKDLGADVC-I--NYKTEDF---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~----~~~~~~g~~~~-~--~~~~~~~---  206 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++.++.+  ..    +.++..+.... +  |-.+...   
T Consensus        54 ~~k~vlI----------TGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~  123 (300)
T PRK06128         54 QGRKALI----------TGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQ  123 (300)
T ss_pred             CCCEEEE----------ecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHH
Confidence            4678999          999999999999999999999988775432  11    22233343222 2  3333221   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCChh---------------------------hHHHhhccccCCCEEEEEeccCC
Q 019790          207 -VARVKEETGGKGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                       .+.+.+..  .++|++|.++|..                           .++.+++.++.+|+++.++....
T Consensus       124 ~~~~~~~~~--g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~  195 (300)
T PRK06128        124 LVERAVKEL--GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS  195 (300)
T ss_pred             HHHHHHHHh--CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence             12222222  3689999988731                           01233455567789988866543

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.055  Score=47.72  Aligned_cols=80  Identities=23%  Similarity=0.310  Sum_probs=52.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCCE-EE--eCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADV-CI--NYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~~-~~--~~~~~~-~~~~  209 (335)
                      .+.++||          +|+++++|.++++.+...|++|+++++++++.+.+.+ +    +... .+  |-.+.. ..+.
T Consensus         7 ~~k~~lI----------tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~   76 (263)
T PRK08339          7 SGKLAFT----------TASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERT   76 (263)
T ss_pred             CCCEEEE----------eCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence            4678999          9999999999999999999999999998776655432 1    2221 22  333322 2222


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.....++|++++++|.
T Consensus        77 ~~~~~~~g~iD~lv~nag~   95 (263)
T PRK08339         77 VKELKNIGEPDIFFFSTGG   95 (263)
T ss_pred             HHHHHhhCCCcEEEECCCC
Confidence            2222222368999998873

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.95  E-value=0.04  Score=48.46  Aligned_cols=79  Identities=27%  Similarity=0.371  Sum_probs=52.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC-EEE--eCCCcc-HHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTED-FVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~-~~~~~~~~  213 (335)
                      ++.++||          +|+++.+|..+++.+...|++|+++.+++++.+.+.+ ++.. ..+  |-.+.. ....+.+.
T Consensus         5 ~~k~vlV----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          5 HGQVALI----------TGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence            4678999          9999999999999999999999999998887766653 3321 122  322221 22222221


Q ss_pred             h-CCCcccEEEeCCC
Q 019790          214 T-GGKGVDVILDCMG  227 (335)
Q Consensus       214 ~-~~~~~d~vid~~g  227 (335)
                      . ...++|++|+++|
T Consensus        75 ~~~~g~id~li~~ag   89 (263)
T PRK06200         75 VDAFGKLDCFVGNAG   89 (263)
T ss_pred             HHhcCCCCEEEECCC
Confidence            1 1136899999887

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.95  E-value=0.054  Score=47.03  Aligned_cols=79  Identities=19%  Similarity=0.311  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE---EEeCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV---CINYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~---~~~~~~~~-~~~~~  210 (335)
                      ++.++||          .|++|.+|..+++.+...|++|+++++++.+.+.+.    ..+...   ..|-.+.. +.+.+
T Consensus         4 ~~~~~lI----------tG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (253)
T PRK08217          4 KDKVIVI----------TGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATF   73 (253)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999998876654432    234332   22322222 22222


Q ss_pred             HHHhC-CCcccEEEeCCC
Q 019790          211 KEETG-GKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~-~~~~d~vid~~g  227 (335)
                      .+... ..++|.+|.++|
T Consensus        74 ~~~~~~~~~id~vi~~ag   91 (253)
T PRK08217         74 AQIAEDFGQLNGLINNAG   91 (253)
T ss_pred             HHHHHHcCCCCEEEECCC
Confidence            22211 136899999887

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.93  E-value=0.059  Score=44.64  Aligned_cols=89  Identities=15%  Similarity=0.125  Sum_probs=62.2

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -.|.+|.|          +| .|.+|..+++.++..|++|++.+++..........+..  ..    ++.+.+.      
T Consensus        34 l~g~tvgI----------iG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--~~----~l~ell~------   90 (178)
T PF02826_consen   34 LRGKTVGI----------IG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--YV----SLDELLA------   90 (178)
T ss_dssp             STTSEEEE----------ES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--ES----SHHHHHH------
T ss_pred             cCCCEEEE----------EE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce--ee----ehhhhcc------
Confidence            46889999          87 89999999999999999999999988776645555541  11    2222221      


Q ss_pred             cccEEEeCCChhh------HHHhhccccCCCEEEEEec
Q 019790          218 GVDVILDCMGASY------FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       218 ~~d~vid~~g~~~------~~~~~~~l~~~G~~v~~g~  249 (335)
                      ..|+|+.+.+...      -...+..|+++..+|-++.
T Consensus        91 ~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen   91 QADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             H-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             hhhhhhhhhccccccceeeeeeeeeccccceEEEeccc
Confidence            3799999887421      1566888888888877653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.043  Score=48.28  Aligned_cols=79  Identities=16%  Similarity=0.277  Sum_probs=52.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~~  211 (335)
                      ++.++||          +|++|.+|..+++.+...|++|+++.+++++.+.+.+    .+... .  .|..+......+.
T Consensus         9 ~~~~vlI----------tGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   78 (263)
T PRK07814          9 DDQVAVV----------TGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLA   78 (263)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999998876554432    22221 1  2333333222221


Q ss_pred             HHh--CCCcccEEEeCCC
Q 019790          212 EET--GGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~--~~~~~d~vid~~g  227 (335)
                      +..  ...++|++|.++|
T Consensus        79 ~~~~~~~~~id~vi~~Ag   96 (263)
T PRK07814         79 GQAVEAFGRLDIVVNNVG   96 (263)
T ss_pred             HHHHHHcCCCCEEEECCC
Confidence            211  1136899999887

>PRK06057 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.048  Score=47.71  Aligned_cols=80  Identities=23%  Similarity=0.287  Sum_probs=53.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EEeCCCccHHHHHHHHh--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CINYKTEDFVARVKEET--  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~~~~--  214 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+++++++.+.+... +++... ..|..+..-.+.+.+..  
T Consensus         6 ~~~~vlI----------tGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (255)
T PRK06057          6 AGRVAVI----------TGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAE   75 (255)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999887665543 344322 23444332222222211  


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                      ...++|+++.++|.
T Consensus        76 ~~~~id~vi~~ag~   89 (255)
T PRK06057         76 TYGSVDIAFNNAGI   89 (255)
T ss_pred             HcCCCCEEEECCCc
Confidence            11368999998863

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.065  Score=46.96  Aligned_cols=83  Identities=22%  Similarity=0.255  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhh-HHH----HHHcCC-C-EE--EeCCCcc
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEK-LAV----CKDLGA-D-VC--INYKTED  205 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~-~~~----~~~~g~-~-~~--~~~~~~~  205 (335)
                      .+.++.++||          +||++++|.++++-+... |++|++++|++++ .+.    ++..+. + ..  .|..+..
T Consensus         4 ~~~~~~~vlI----------tGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~   73 (253)
T PRK07904          4 AVGNPQTILL----------LGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD   73 (253)
T ss_pred             ccCCCcEEEE----------EcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH
Confidence            3456788999          999999999999877767 5899999988764 332    333332 1 22  2333322


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCCh
Q 019790          206 -FVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                       ..+.+.+.....++|+++.++|.
T Consensus        74 ~~~~~~~~~~~~g~id~li~~ag~   97 (253)
T PRK07904         74 SHPKVIDAAFAGGDVDVAIVAFGL   97 (253)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeeec
Confidence             22223333322479999987764

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.05  Score=47.55  Aligned_cols=80  Identities=24%  Similarity=0.333  Sum_probs=52.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEE--eCCCc-cHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTE-DFVAR  209 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~-~~~~~  209 (335)
                      ..+.+++|          +|++|.+|..++..+...|++|+++.+++++.+.+..    .+.. ..+  |..+. ++.+.
T Consensus         7 ~~~k~ilI----------tGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   76 (258)
T PRK06949          7 LEGKVALV----------TGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAA   76 (258)
T ss_pred             CCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            45688999          9999999999999999999999999998887655432    1211 222  32222 12222


Q ss_pred             HHHH-hCCCcccEEEeCCC
Q 019790          210 VKEE-TGGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~-~~~~~~d~vid~~g  227 (335)
                      +.+. ....++|++|.+.|
T Consensus        77 ~~~~~~~~~~~d~li~~ag   95 (258)
T PRK06949         77 VAHAETEAGTIDILVNNSG   95 (258)
T ss_pred             HHHHHHhcCCCCEEEECCC
Confidence            2211 01136899999988

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.18  Score=44.55  Aligned_cols=71  Identities=28%  Similarity=0.455  Sum_probs=46.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE----EEeCCCccHH----HHHHHHhCCCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV----CINYKTEDFV----ARVKEETGGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~----~~~~~~~~~~----~~~~~~~~~~~~d~vi  223 (335)
                      +||++.+|..+++.+...|++|+++.++++..+.+    +..+...    ..|..+....    +.+.+..  .++|++|
T Consensus         6 tGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~lv   83 (272)
T PRK07832          6 TGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH--GSMDVVM   83 (272)
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc--CCCCEEE
Confidence            99999999999999999999999999887665443    2233321    2344432222    2222222  3689999


Q ss_pred             eCCCh
Q 019790          224 DCMGA  228 (335)
Q Consensus       224 d~~g~  228 (335)
                      .++|.
T Consensus        84 ~~ag~   88 (272)
T PRK07832         84 NIAGI   88 (272)
T ss_pred             ECCCC
Confidence            99874

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=95.88  E-value=0.13  Score=43.98  Aligned_cols=102  Identities=22%  Similarity=0.244  Sum_probs=70.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCCEEEeCCC-cc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADVCINYKT-ED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~-~~  205 (335)
                      .........++|-          +|  +.+|..++.+|..+.  .+++.+.+++++.+.+++    .|.+..+.... .+
T Consensus        53 ~L~~~~~~k~iLE----------iG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd  120 (219)
T COG4122          53 LLARLSGPKRILE----------IG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD  120 (219)
T ss_pred             HHHHhcCCceEEE----------ee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc
Confidence            3455567778888          77  778999999999886  489999999998877764    55544222222 35


Q ss_pred             HHHHHHHHhCCCcccEEEe-CCCh---hhHHHhhccccCCCEEEEE
Q 019790          206 FVARVKEETGGKGVDVILD-CMGA---SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid-~~g~---~~~~~~~~~l~~~G~~v~~  247 (335)
                      ..+.+.+ ...+.||+||- +.-.   ..++.+++.|++||-++.=
T Consensus       121 al~~l~~-~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D  165 (219)
T COG4122         121 ALDVLSR-LLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD  165 (219)
T ss_pred             HHHHHHh-ccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence            5555555 33358999974 4433   3468889999999987653

>PRK06196 oxidoreductase; Provisional

Probab=95.87  E-value=0.049  Score=49.47  Aligned_cols=79  Identities=19%  Similarity=0.300  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCcc-HHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTED-FVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~-~~~~~~~~~  214 (335)
                      .+.++||          +|++|.+|.+++..+...|++|++++|+.++.+.+. ++..-..  .|-.+.. ..+.+.+..
T Consensus        25 ~~k~vlI----------TGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~   94 (315)
T PRK06196         25 SGKTAIV----------TGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFL   94 (315)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHH
Confidence            4678999          999999999999999889999999999887665443 2221122  2333322 222222221


Q ss_pred             C-CCcccEEEeCCC
Q 019790          215 G-GKGVDVILDCMG  227 (335)
Q Consensus       215 ~-~~~~d~vid~~g  227 (335)
                      . ..++|++|.++|
T Consensus        95 ~~~~~iD~li~nAg  108 (315)
T PRK06196         95 DSGRRIDILINNAG  108 (315)
T ss_pred             hcCCCCCEEEECCC
Confidence            1 236999999887

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.068  Score=46.64  Aligned_cols=73  Identities=18%  Similarity=0.275  Sum_probs=50.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCccHHHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTEDFVARVKEE  213 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~~~~~~~~~  213 (335)
                      .++||          +|++|.+|..+++.+...|++|+++++++...+.+.+    .+... +  .|..+.   ..+.+.
T Consensus         3 ~~vlV----------tGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~   69 (257)
T PRK09291          3 KTILI----------TGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA---IDRAQA   69 (257)
T ss_pred             CEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH---HHHHHH
Confidence            47899          9999999999999999999999999998766554432    23221 1  233332   233333


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .. .++|++|.|+|
T Consensus        70 ~~-~~id~vi~~ag   82 (257)
T PRK09291         70 AE-WDVDVLLNNAG   82 (257)
T ss_pred             hc-CCCCEEEECCC
Confidence            33 37999999987

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.83  E-value=0.047  Score=47.44  Aligned_cols=80  Identities=26%  Similarity=0.334  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC--CCE-EE--eCCCcc-HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--ADV-CI--NYKTED-FVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g--~~~-~~--~~~~~~-~~~~~~  211 (335)
                      ++.++||          +|++|.+|..+++.+...|++|++++|++++.+.+. .+.  ... .+  |..+.. +...+.
T Consensus         4 ~~~~vlI----------tGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (251)
T PRK07231          4 EGKVAIV----------TGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVA   73 (251)
T ss_pred             CCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            3568999          999999999999999999999999999987765543 222  111 12  222222 222222


Q ss_pred             HH-hCCCcccEEEeCCCh
Q 019790          212 EE-TGGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~-~~~~~~d~vid~~g~  228 (335)
                      +. ....++|++|.++|.
T Consensus        74 ~~~~~~~~~d~vi~~ag~   91 (251)
T PRK07231         74 AALERFGSVDILVNNAGT   91 (251)
T ss_pred             HHHHHhCCCCEEEECCCC
Confidence            11 112368999998874

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.82  E-value=0.15  Score=41.96  Aligned_cols=91  Identities=20%  Similarity=0.318  Sum_probs=60.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh------
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS------  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~------  229 (335)
                      +|++|-+|....+=|+.+|-+|++++|++++.......   .++..+-.+.. .+.+.+  .++|+||++.+..      
T Consensus         6 IgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd~~-~~a~~l--~g~DaVIsA~~~~~~~~~~   79 (211)
T COG2910           6 IGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFDLT-SLASDL--AGHDAVISAFGAGASDNDE   79 (211)
T ss_pred             EecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccChh-hhHhhh--cCCceEEEeccCCCCChhH
Confidence            89999999999999999999999999999887654221   11111111111 122222  4799999988753      


Q ss_pred             ----hHHHhhccccCC--CEEEEEeccCC
Q 019790          230 ----YFQRNLGSLNID--GRLFIIGTQGG  252 (335)
Q Consensus       230 ----~~~~~~~~l~~~--G~~v~~g~~~~  252 (335)
                          ..+..+..|+.-  -|+..+|+...
T Consensus        80 ~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          80 LHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             HHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence                123356666653  48888887653

>PRK04148 hypothetical protein; Provisional

Probab=95.82  E-value=0.091  Score=41.12  Aligned_cols=82  Identities=16%  Similarity=0.133  Sum_probs=56.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~  216 (335)
                      .++.++++          .| .| .|...+..+..+|.+|++++.+++..+.+++.+.+.+.+.-. .+.  .+   .  
T Consensus        15 ~~~~kile----------IG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~---y--   75 (134)
T PRK04148         15 GKNKKIVE----------LG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EI---Y--   75 (134)
T ss_pred             ccCCEEEE----------EE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HH---H--
Confidence            45577888          77 67 887666666678999999999999999998888766554322 211  11   1  


Q ss_pred             CcccEEEeCCChhhHHHhhccc
Q 019790          217 KGVDVILDCMGASYFQRNLGSL  238 (335)
Q Consensus       217 ~~~d~vid~~g~~~~~~~~~~l  238 (335)
                      +++|+++.+-....++..+..|
T Consensus        76 ~~a~liysirpp~el~~~~~~l   97 (134)
T PRK04148         76 KNAKLIYSIRPPRDLQPFILEL   97 (134)
T ss_pred             hcCCEEEEeCCCHHHHHHHHHH
Confidence            2688998888776665544333

>PRK06194 hypothetical protein; Provisional

Probab=95.82  E-value=0.06  Score=47.96  Aligned_cols=79  Identities=18%  Similarity=0.337  Sum_probs=50.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H---cCCCE-EE--eCCCc-cHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADV-CI--NYKTE-DFVARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~---~g~~~-~~--~~~~~-~~~~~~~  211 (335)
                      +.++||          +||+|.+|..++..+...|++|++++++.+..+... +   .+... .+  |-.+. .+.+.+.
T Consensus         6 ~k~vlV----------tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   75 (287)
T PRK06194          6 GKVAVI----------TGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALAD   75 (287)
T ss_pred             CCEEEE----------eCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            568999          999999999999999889999999998866554432 2   23322 12  22222 1111111


Q ss_pred             HHh-CCCcccEEEeCCCh
Q 019790          212 EET-GGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~-~~~~~d~vid~~g~  228 (335)
                      ... ...++|++|.++|.
T Consensus        76 ~~~~~~g~id~vi~~Ag~   93 (287)
T PRK06194         76 AALERFGAVHLLFNNAGV   93 (287)
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            110 11358999998874

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=95.76  E-value=0.14  Score=46.69  Aligned_cols=99  Identities=23%  Similarity=0.167  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHH----HcCCCEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~  206 (335)
                      ....++++++||.          .| +| .|..++.+++..+.  +|++++.+++..+.++    ..+.+.+... ..+.
T Consensus        74 ~~L~i~~g~~VLD----------IG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD~  140 (322)
T PRK13943         74 EWVGLDKGMRVLE----------IG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGDG  140 (322)
T ss_pred             HhcCCCCCCEEEE----------Ee-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCCh
Confidence            4456788999998          87 44 69999999998764  6999999988765554    3555433211 1222


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790          207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~  247 (335)
                      .+.+.   ...+||+|+.+.+... ....++.|+++|+++..
T Consensus       141 ~~~~~---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        141 YYGVP---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             hhccc---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            21111   1246999999887654 34578899999998764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.74  E-value=0.072  Score=46.28  Aligned_cols=80  Identities=19%  Similarity=0.226  Sum_probs=50.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHHHcCCCE-E--EeCCCcc-HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV-C--INYKTED-FVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~g~~~-~--~~~~~~~-~~~~~~~  212 (335)
                      .+.++||          .|+++.+|..++..+...|++|++++++...  .+.+++.+... .  .|..+.. +...+.+
T Consensus         4 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (248)
T TIGR01832         4 EGKVALV----------TGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDS   73 (248)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            4678999          9999999999999999999999999986532  23333444322 2  2333322 2222222


Q ss_pred             Hh-CCCcccEEEeCCCh
Q 019790          213 ET-GGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~-~~~~~d~vid~~g~  228 (335)
                      .. ...++|+++.++|.
T Consensus        74 ~~~~~~~~d~li~~ag~   90 (248)
T TIGR01832        74 AVEEFGHIDILVNNAGI   90 (248)
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            11 11368999998863

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.059  Score=47.87  Aligned_cols=79  Identities=27%  Similarity=0.249  Sum_probs=52.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC-CCE---EEeCCCccH-HHHHHHHh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-ADV---CINYKTEDF-VARVKEET  214 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g-~~~---~~~~~~~~~-~~~~~~~~  214 (335)
                      +.++||          +|++|.+|.++++.+...|++|+++++++++.+.+.+.. ...   ..|..+... ...+....
T Consensus         4 ~~~vlV----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~   73 (277)
T PRK06180          4 MKTWLI----------TGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAE   73 (277)
T ss_pred             CCEEEE----------ecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHH
Confidence            467999          999999999999999989999999999988776665432 111   123333221 22222111


Q ss_pred             -CCCcccEEEeCCCh
Q 019790          215 -GGKGVDVILDCMGA  228 (335)
Q Consensus       215 -~~~~~d~vid~~g~  228 (335)
                       .-.++|+++.++|.
T Consensus        74 ~~~~~~d~vv~~ag~   88 (277)
T PRK06180         74 ATFGPIDVLVNNAGY   88 (277)
T ss_pred             HHhCCCCEEEECCCc
Confidence             11258999999875

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.72  E-value=0.12  Score=48.95  Aligned_cols=142  Identities=17%  Similarity=0.265  Sum_probs=88.7

Q ss_pred             CCCCCceEEEEEEecCCCCCCCCCCEEE-----------------EecCCcceeeEEEecCCceEe---C-CCCCChhhh
Q 019790           59 PYPGLECSGTILSVGKNVSRWKVGDQVC-----------------ALLGGGGYAEKVAVPAGQVLP---V-PSGVSLKDA  117 (335)
Q Consensus        59 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~-----------------~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~a  117 (335)
                      ..-|.|+++-+.+|+++.+..-+|+.-+                 +...++.|++++.++. .+..   + +..++...+
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~  166 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSA  166 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH
Confidence            3468899999999999887665665532                 1112356777776654 2221   2 222222222


Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHH-HHHHcCC
Q 019790          118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGA  195 (335)
Q Consensus       118 a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~-~~~~~g~  195 (335)
                      |        .-.+. +..+..++.+++|          .| +|.+|..+++.++..| .+|+++.++.++.+ .++.++.
T Consensus       167 A--------v~la~-~~~~~l~~~~VlV----------iG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~  226 (417)
T TIGR01035       167 A--------VELAE-RIFGSLKGKKALL----------IG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG  226 (417)
T ss_pred             H--------HHHHH-HHhCCccCCEEEE----------EC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC
Confidence            1        11122 3333467789999          88 6999999999999999 58999999988755 4456665


Q ss_pred             CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          196 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                      .. ++.      +.+.+..  .++|+||.|+++..
T Consensus       227 ~~-i~~------~~l~~~l--~~aDvVi~aT~s~~  252 (417)
T TIGR01035       227 EA-VKF------EDLEEYL--AEADIVISSTGAPH  252 (417)
T ss_pred             eE-eeH------HHHHHHH--hhCCEEEECCCCCC
Confidence            32 221      1222332  25899999998753

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.69  E-value=0.075  Score=46.49  Aligned_cols=78  Identities=23%  Similarity=0.334  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCccHHH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDFVA---  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~---  208 (335)
                      .+.++||          +|++|.+|..++..+...|++|+++.+++++.+.+    ++.+....   .|..+....+   
T Consensus         6 ~~~~vlI----------tGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (262)
T PRK13394          6 NGKTAVV----------TGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGI   75 (262)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHH
Confidence            4678999          99999999999999999999999999988655433    23343322   1333322111   


Q ss_pred             -HHHHHhCCCcccEEEeCCCh
Q 019790          209 -RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+..  .++|++|.|+|.
T Consensus        76 ~~~~~~~--~~~d~vi~~ag~   94 (262)
T PRK13394         76 DKVAERF--GSVDILVSNAGI   94 (262)
T ss_pred             HHHHHHc--CCCCEEEECCcc
Confidence             222222  358999998874

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.063  Score=48.72  Aligned_cols=77  Identities=17%  Similarity=0.336  Sum_probs=51.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc-----CCCE-E--EeCCCcc----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GADV-C--INYKTED----  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~-----g~~~-~--~~~~~~~----  205 (335)
                      .+.+++|          +|+++++|.+++..+...|++|++++|+.++.+.+. ++     +... .  .|-.+..    
T Consensus        13 ~gk~~lI----------TGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~   82 (313)
T PRK05854         13 SGKRAVV----------TGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAA   82 (313)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHH
Confidence            3678999          999999999999999889999999999877654432 11     1111 1  2333322    


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+.+.  ..++|++|+++|
T Consensus        83 ~~~~~~~~--~~~iD~li~nAG  102 (313)
T PRK05854         83 LGEQLRAE--GRPIHLLINNAG  102 (313)
T ss_pred             HHHHHHHh--CCCccEEEECCc
Confidence            12222222  236899999887

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.087  Score=46.03  Aligned_cols=75  Identities=16%  Similarity=0.231  Sum_probs=49.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccHHHHHHHHhCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEETGG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~  216 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++.........+....  .|..+.   +.+.+..+ 
T Consensus        13 ~~k~~lI----------TGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~-   78 (245)
T PRK12367         13 QGKRIGI----------TGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKE---ESLDKQLA-   78 (245)
T ss_pred             CCCEEEE----------EcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCH---HHHHHhcC-
Confidence            3578999          9999999999999999999999999987622211111111122  233222   23333332 


Q ss_pred             CcccEEEeCCCh
Q 019790          217 KGVDVILDCMGA  228 (335)
Q Consensus       217 ~~~d~vid~~g~  228 (335)
                       ++|++|+|+|.
T Consensus        79 -~iDilVnnAG~   89 (245)
T PRK12367         79 -SLDVLILNHGI   89 (245)
T ss_pred             -CCCEEEECCcc
Confidence             59999999874

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.67  E-value=0.13  Score=44.61  Aligned_cols=103  Identities=15%  Similarity=0.131  Sum_probs=66.7

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCcc
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTED  205 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~  205 (335)
                      ....+..+..++|-          .|  +..|..++.+++.+  +.+|+.++.+++..+.+++    .|....+.....+
T Consensus        61 ~~l~~~~~~~~vLE----------iG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd  128 (234)
T PLN02781         61 SMLVKIMNAKNTLE----------IG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD  128 (234)
T ss_pred             HHHHHHhCCCEEEE----------ec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc
Confidence            34556667788988          77  56777777788776  3599999999887776653    4432222222333


Q ss_pred             HHHHHHHHhC---CCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790          206 FVARVKEETG---GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       206 ~~~~~~~~~~---~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (335)
                      ..+.+.+...   ...||+||--...    ..+..+++.+++||.++.
T Consensus       129 a~~~L~~l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        129 ALSALDQLLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             HHHHHHHHHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence            3444444321   2479999865543    235778899999998765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.67  E-value=0.13  Score=42.13  Aligned_cols=95  Identities=16%  Similarity=0.175  Sum_probs=60.9

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccch-HHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG-IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~-~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .|+...++...+.....--.+.+++|          .|+ |. +|..++..++..|++|+++.++.+             
T Consensus        24 ~p~~~~a~v~l~~~~~~~l~gk~vlV----------iG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~-------------   79 (168)
T cd01080          24 IPCTPAGILELLKRYGIDLAGKKVVV----------VGR-SNIVGKPLAALLLNRNATVTVCHSKTK-------------   79 (168)
T ss_pred             cCChHHHHHHHHHHcCCCCCCCEEEE----------ECC-cHHHHHHHHHHHhhCCCEEEEEECCch-------------
Confidence            44444444544444433457889999          885 65 699899999999999998887631             


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                                .+.+..  ..+|+||.|++...+ --.+.++++-.++.++.+.
T Consensus        80 ----------~l~~~l--~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr  119 (168)
T cd01080          80 ----------NLKEHT--KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR  119 (168)
T ss_pred             ----------hHHHHH--hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence                      122222  248999999998653 1122455555566776554

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.67  E-value=0.039  Score=46.13  Aligned_cols=96  Identities=23%  Similarity=0.246  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~  210 (335)
                      .++++.++|-          .|  ++.|..+..+++.. +++|+.++.+++..+.+++    .+.+.+ .....+..   
T Consensus        42 ~l~~g~~VLD----------iG--cGtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d~~---  105 (187)
T PRK00107         42 YLPGGERVLD----------VG--SGAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGRAE---  105 (187)
T ss_pred             hcCCCCeEEE----------Ec--CCCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEeccHh---
Confidence            3455778877          66  34455555666544 6799999999887766643    443221 11112211   


Q ss_pred             HHHhCCCcccEEEeCCCh---hhHHHhhccccCCCEEEEEe
Q 019790          211 KEETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  248 (335)
                       +....+.||+|+-....   ..+..+.+.|+++|+++.+-
T Consensus       106 -~~~~~~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        106 -EFGQEEKFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             -hCCCCCCccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence             11123479999964332   23567889999999998773

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=95.65  E-value=0.025  Score=48.42  Aligned_cols=97  Identities=21%  Similarity=0.122  Sum_probs=62.5

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LGADV--CINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~  204 (335)
                      ....+++++++|-          .|  ++.|..+..+++..+.  +|+.++.+++..+.+++    .+.+.  ++..+..
T Consensus        71 ~~l~~~~~~~VLD----------iG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~  138 (215)
T TIGR00080        71 ELLELKPGMKVLE----------IG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGT  138 (215)
T ss_pred             HHhCCCCcCEEEE----------EC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcc
Confidence            4557889999988          76  5567777788887653  69999998887766643    44322  2211111


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEE
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~  247 (335)
                         +.   .....+||+|+-+.... ......+.|+++|+++..
T Consensus       139 ---~~---~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       139 ---QG---WEPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ---cC---CcccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence               10   11124799988554333 345678899999998764

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.073  Score=46.46  Aligned_cols=77  Identities=25%  Similarity=0.328  Sum_probs=52.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~-~~---  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.++.++.+.+.+    .+... .  .|-.+.. ..   
T Consensus         8 ~~k~vlV----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   77 (253)
T PRK05867          8 HGKRALI----------TGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSML   77 (253)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999998776655432    23221 1  2333322 22   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|+++.+.|
T Consensus        78 ~~~~~~~--g~id~lv~~ag   95 (253)
T PRK05867         78 DQVTAEL--GGIDIAVCNAG   95 (253)
T ss_pred             HHHHHHh--CCCCEEEECCC
Confidence            2222222  36899999887

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.078  Score=46.00  Aligned_cols=78  Identities=24%  Similarity=0.366  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~---~~~~  210 (335)
                      ++.+++|          .|++|.+|..+++.+...|++|++++++++..+.+. +++.... +  |..+.. .   .+.+
T Consensus         5 ~~k~vlI----------tGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (249)
T PRK06500          5 QGKTALI----------TGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQAL   74 (249)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            4568999          999999999999999999999999998876655443 4454321 2  322222 1   1222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|++|.++|.
T Consensus        75 ~~~~--~~id~vi~~ag~   90 (249)
T PRK06500         75 AEAF--GRLDAVFINAGV   90 (249)
T ss_pred             HHHh--CCCCEEEECCCC
Confidence            2222  368999998873

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.082  Score=46.18  Aligned_cols=78  Identities=23%  Similarity=0.278  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCcc-HHH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTED-FVA--  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~-~~~--  208 (335)
                      .+.++||          .||++.+|..++..+...|++|+++.++++..+.+.+    .+..   ...|..+.. +..  
T Consensus         4 ~~k~vlI----------tGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (258)
T PRK07890          4 KGKVVVV----------SGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLV   73 (258)
T ss_pred             CCCEEEE----------ECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999998876655432    1222   122333322 222  


Q ss_pred             -HHHHHhCCCcccEEEeCCCh
Q 019790          209 -RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+..  .++|++|.+.|.
T Consensus        74 ~~~~~~~--g~~d~vi~~ag~   92 (258)
T PRK07890         74 ALALERF--GRVDALVNNAFR   92 (258)
T ss_pred             HHHHHHc--CCccEEEECCcc
Confidence             222222  368999998863

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.064  Score=46.80  Aligned_cols=78  Identities=24%  Similarity=0.344  Sum_probs=51.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE--E--EeCCCcc-HHH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--C--INYKTED-FVA---RV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~-~~~---~~  210 (335)
                      ++.++||          +|+++.+|..+++.+...|++|+++.++++..+...+.....  .  .|-.+.. +.+   .+
T Consensus        14 ~~k~vlI----------tGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   83 (255)
T PRK06841         14 SGKVAVV----------TGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAV   83 (255)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999889999999999876554444432211  2  2332221 111   22


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|+++.++|.
T Consensus        84 ~~~~--~~~d~vi~~ag~   99 (255)
T PRK06841         84 ISAF--GRIDILVNSAGV   99 (255)
T ss_pred             HHHh--CCCCEEEECCCC
Confidence            2222  368999998873

>PRK06720 hypothetical protein; Provisional

Probab=95.60  E-value=0.15  Score=41.90  Aligned_cols=40  Identities=33%  Similarity=0.407  Sum_probs=34.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      .+..++|          .|+++++|...+..+...|++|+++.++.+..+
T Consensus        15 ~gk~~lV----------TGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~   54 (169)
T PRK06720         15 AGKVAIV----------TGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQ   54 (169)
T ss_pred             CCCEEEE----------ecCCChHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4678999          999999999999988888999999998876553

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.092  Score=46.28  Aligned_cols=79  Identities=23%  Similarity=0.247  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~  210 (335)
                      ++.++||          .|+++.+|..+++.+...|++|+++.+++++.+...    ..+... .  .|-.+.. ....+
T Consensus         8 ~~k~ilI----------tGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~   77 (264)
T PRK07576          8 AGKNVVV----------VGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAF   77 (264)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHH
Confidence            5678999          999999999999999999999999999877654332    222221 1  2333322 22222


Q ss_pred             HHHh-CCCcccEEEeCCC
Q 019790          211 KEET-GGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~-~~~~~d~vid~~g  227 (335)
                      .+.. ...++|++|.+.|
T Consensus        78 ~~~~~~~~~iD~vi~~ag   95 (264)
T PRK07576         78 AQIADEFGPIDVLVSGAA   95 (264)
T ss_pred             HHHHHHcCCCCEEEECCC
Confidence            2221 1136899998875

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.085  Score=46.22  Aligned_cols=78  Identities=24%  Similarity=0.359  Sum_probs=52.4

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC-CC-E--EEeCCCcc-HHHHHHHHh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-AD-V--CINYKTED-FVARVKEET  214 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g-~~-~--~~~~~~~~-~~~~~~~~~  214 (335)
                      .++||          +||+|.+|..+++.+...|++|++++++.+..+.+.. .+ .. .  ..|-.+.. +.+.+.+..
T Consensus         2 k~vlI----------tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   71 (260)
T PRK08267          2 KSIFI----------TGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFA   71 (260)
T ss_pred             cEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            36888          9999999999999998899999999999887766643 22 11 1  22333322 222222221


Q ss_pred             C--CCcccEEEeCCCh
Q 019790          215 G--GKGVDVILDCMGA  228 (335)
Q Consensus       215 ~--~~~~d~vid~~g~  228 (335)
                      .  ..++|+++.|+|.
T Consensus        72 ~~~~~~id~vi~~ag~   87 (260)
T PRK08267         72 AATGGRLDVLFNNAGI   87 (260)
T ss_pred             HHcCCCCCEEEECCCC
Confidence            1  2468999998874

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.07  Score=47.16  Aligned_cols=77  Identities=22%  Similarity=0.336  Sum_probs=52.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC-CCE-EEeCCCcc-HH---HHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG-ADV-CINYKTED-FV---ARVKE  212 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g-~~~-~~~~~~~~-~~---~~~~~  212 (335)
                      +.++||          +|++|.+|..+++.+...|++|+++.+++++.+.+. .++ ... ..|-.+.+ +.   +.+.+
T Consensus         5 ~~~ilV----------tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (273)
T PRK07825          5 GKVVAI----------TGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEA   74 (273)
T ss_pred             CCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHH
Confidence            568999          999999999999988888999999999888776553 343 221 22333322 21   22222


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ..  .++|+++.++|.
T Consensus        75 ~~--~~id~li~~ag~   88 (273)
T PRK07825         75 DL--GPIDVLVNNAGV   88 (273)
T ss_pred             Hc--CCCCEEEECCCc
Confidence            22  368999999873

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.11  Score=45.72  Aligned_cols=80  Identities=21%  Similarity=0.303  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--CCC-EE--EeCCCccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VC--INYKTEDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--g~~-~~--~~~~~~~~~~~~~~  212 (335)
                      ++.++||          +||+|.+|..++..+...|++|++++++++..+.+.. +  +.. ..  .|-.+..-...+.+
T Consensus         4 ~~~~vlI----------tG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   73 (263)
T PRK09072          4 KDKRVLL----------TGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLA   73 (263)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            4568999          9999999999999999999999999999877665542 2  211 11  23333221111211


Q ss_pred             -HhCCCcccEEEeCCCh
Q 019790          213 -ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 -~~~~~~~d~vid~~g~  228 (335)
                       ....+++|.++.++|.
T Consensus        74 ~~~~~~~id~lv~~ag~   90 (263)
T PRK09072         74 RAREMGGINVLINNAGV   90 (263)
T ss_pred             HHHhcCCCCEEEECCCC
Confidence             1112468999998874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.55  E-value=0.08  Score=48.18  Aligned_cols=79  Identities=22%  Similarity=0.304  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~-~~~~~  210 (335)
                      .+.++||          +|+++.+|..+++.+...|++|++++|+.++.+.+. ++.   .. ..  .|-.+.. ..+.+
T Consensus         5 ~~k~vlV----------TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   74 (322)
T PRK07453          5 AKGTVII----------TGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFV   74 (322)
T ss_pred             CCCEEEE----------EcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHH
Confidence            3568999          999999999999999888999999999887665443 231   11 11  2333322 22222


Q ss_pred             HHHh-CCCcccEEEeCCC
Q 019790          211 KEET-GGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~-~~~~~d~vid~~g  227 (335)
                      .+.. ...++|++|+++|
T Consensus        75 ~~~~~~~~~iD~li~nAg   92 (322)
T PRK07453         75 DDFRALGKPLDALVCNAA   92 (322)
T ss_pred             HHHHHhCCCccEEEECCc
Confidence            2211 1236899999887

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=95.54  E-value=0.08  Score=47.26  Aligned_cols=148  Identities=18%  Similarity=0.250  Sum_probs=85.4

Q ss_pred             CCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh-cCCCCCCEEEEeecccccccccc
Q 019790           79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT-SHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~-~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      +++|++.+-..   +|.++..-....++++.+++-+-.+    ....|++ +|... .-++++.++|=          .|
T Consensus       109 ~rig~~f~I~P---sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlD----------vG  170 (300)
T COG2264         109 VRIGERFVIVP---SWREYPEPSDELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLD----------VG  170 (300)
T ss_pred             EEeeeeEEECC---CCccCCCCCCceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEE----------ec
Confidence            56777766543   3444322223556777766654333    3333433 33222 23357777776          66


Q ss_pred             ccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-
Q 019790          158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-  231 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-  231 (335)
                        ++.|.+++..++. |+ +|++++-.+...+.+++    .+... ... ...+  ...+...+++||+|+.++=...+ 
T Consensus       171 --cGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~-~~~~--~~~~~~~~~~~DvIVANILA~vl~  243 (300)
T COG2264         171 --CGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVEL-LVQ-AKGF--LLLEVPENGPFDVIVANILAEVLV  243 (300)
T ss_pred             --CChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCch-hhh-cccc--cchhhcccCcccEEEehhhHHHHH
Confidence              5567777776665 77 69999988776666653    23221 000 0101  11111223589999988855432 


Q ss_pred             ---HHhhccccCCCEEEEEeccC
Q 019790          232 ---QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       232 ---~~~~~~l~~~G~~v~~g~~~  251 (335)
                         ......++++|++++-|...
T Consensus       244 ~La~~~~~~lkpgg~lIlSGIl~  266 (300)
T COG2264         244 ELAPDIKRLLKPGGRLILSGILE  266 (300)
T ss_pred             HHHHHHHHHcCCCceEEEEeehH
Confidence               56788899999999988654

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.11  Score=45.41  Aligned_cols=78  Identities=27%  Similarity=0.409  Sum_probs=52.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~---~  207 (335)
                      .+.++||          .|+++.+|..++..+...|++|+++++++++.+.+.    +.+... .+  |..+.+ .   .
T Consensus         5 ~~k~~lI----------tGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (254)
T PRK07478          5 NGKVAII----------TGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALV   74 (254)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            3568999          999999999999999999999999999887765543    233222 22  322222 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|++|.++|.
T Consensus        75 ~~~~~~~--~~id~li~~ag~   93 (254)
T PRK07478         75 ALAVERF--GGLDIAFNNAGT   93 (254)
T ss_pred             HHHHHhc--CCCCEEEECCCC
Confidence            2222222  368999998873

>PLN02476 O-methyltransferase

Probab=95.53  E-value=0.16  Score=45.16  Aligned_cols=104  Identities=16%  Similarity=0.161  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCc
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTE  204 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~  204 (335)
                      +.......+..++|-          +|  +.+|..++.+|+.+  +.+|+.++.+++..+.++    +.|....+.....
T Consensus       110 L~~L~~~~~ak~VLE----------IG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G  177 (278)
T PLN02476        110 LAMLVQILGAERCIE----------VG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG  177 (278)
T ss_pred             HHHHHHhcCCCeEEE----------ec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc
Confidence            334556667788998          87  67788888898877  347999999988777764    3454322333334


Q ss_pred             cHHHHHHHHh---CCCcccEEEeCCChh----hHHHhhccccCCCEEEE
Q 019790          205 DFVARVKEET---GGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       205 ~~~~~~~~~~---~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~  246 (335)
                      +..+.+.+..   ....||.||--....    .+..+++.|+++|.++.
T Consensus       178 dA~e~L~~l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        178 LAAESLKSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             CHHHHHHHHHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence            4444444432   124799998655542    35778899999998764

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.077  Score=46.41  Aligned_cols=79  Identities=16%  Similarity=0.224  Sum_probs=51.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE-EE--eCCCcc-HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV-CI--NYKTED-FVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~-~~--~~~~~~-~~~~~~  211 (335)
                      .+.++||          +|++|.+|..+++.+...|++|++++++++..+..++   .+... .+  |..+.. ....+.
T Consensus         6 ~~~~ilI----------tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (258)
T PRK08628          6 KDKVVIV----------TGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVE   75 (258)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            4568999          9999999999999998899999999988776533332   33221 22  222221 222122


Q ss_pred             HHhC-CCcccEEEeCCC
Q 019790          212 EETG-GKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~-~~~~d~vid~~g  227 (335)
                      +... ..++|++|.++|
T Consensus        76 ~~~~~~~~id~vi~~ag   92 (258)
T PRK08628         76 QTVAKFGRIDGLVNNAG   92 (258)
T ss_pred             HHHHhcCCCCEEEECCc
Confidence            2111 136899999988

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.52  E-value=0.67  Score=38.78  Aligned_cols=77  Identities=26%  Similarity=0.354  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCCEE-EeCCCccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC-INYKTEDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~~~-~~~~~~~~~~~~~~  212 (335)
                      .+.+++|          .|++|.+|..++..+...|++|+++.|+.++.+.+.+ +    +.... .+..+   .+.+.+
T Consensus        27 ~~~~vlV----------lGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~   93 (194)
T cd01078          27 KGKTAVV----------LGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAA   93 (194)
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHH
Confidence            5678999          9989999999888888889999999999877665542 2    22211 11221   122233


Q ss_pred             HhCCCcccEEEeCCChhh
Q 019790          213 ETGGKGVDVILDCMGASY  230 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~~~  230 (335)
                      ..  .++|+||.+++...
T Consensus        94 ~~--~~~diVi~at~~g~  109 (194)
T cd01078          94 AI--KGADVVFAAGAAGV  109 (194)
T ss_pred             HH--hcCCEEEECCCCCc
Confidence            33  35899999887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.49  E-value=0.088  Score=46.02  Aligned_cols=79  Identities=15%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHHHcCCCE---EEeCCCcc-HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV---CINYKTED-FVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~g~~~---~~~~~~~~-~~~~~~~  212 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++..  .+.+++.+.+.   ..|-.+.. +.+.+.+
T Consensus         7 ~~k~~lI----------tGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12481          7 NGKVAII----------TGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQ   76 (251)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHH
Confidence            4678999          9999999999999999999999998875432  22333444332   12333322 2222222


Q ss_pred             Hh-CCCcccEEEeCCC
Q 019790          213 ET-GGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~-~~~~~d~vid~~g  227 (335)
                      .. ...++|+++.+.|
T Consensus        77 ~~~~~g~iD~lv~~ag   92 (251)
T PRK12481         77 AVEVMGHIDILINNAG   92 (251)
T ss_pred             HHHHcCCCCEEEECCC
Confidence            11 1136899999887

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.49  E-value=0.082  Score=46.37  Aligned_cols=78  Identities=19%  Similarity=0.341  Sum_probs=49.8

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-HHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-FVARVKE  212 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~~~~~~~  212 (335)
                      .++||          .|++|.+|..+++.+...|++|+++++++.+.+.+.    ..+.... +  |..+.. +...+.+
T Consensus         2 ~~vlV----------tGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   71 (263)
T PRK06181          2 KVVII----------TGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA   71 (263)
T ss_pred             CEEEE----------ecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            46889          999999999999999999999999999876654332    2333221 1  222221 2222222


Q ss_pred             Hh-CCCcccEEEeCCCh
Q 019790          213 ET-GGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~-~~~~~d~vid~~g~  228 (335)
                      .. ...++|++|.|+|.
T Consensus        72 ~~~~~~~id~vi~~ag~   88 (263)
T PRK06181         72 AVARFGGIDILVNNAGI   88 (263)
T ss_pred             HHHHcCCCCEEEECCCc
Confidence            11 11368999999864

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.49  E-value=0.098  Score=45.09  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=51.3

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-HHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-FVARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~~~~~~  211 (335)
                      +.++||          +|++|.+|..+++.+...|.+|+++.+++++.+...    +.+....   .|..+.. +...+.
T Consensus         5 ~~~ilI----------tGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T PRK05653          5 GKTALV----------TGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIE   74 (246)
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            468999          999999999999999999999999999877654432    2333222   2333322 222222


Q ss_pred             HHhC-CCcccEEEeCCCh
Q 019790          212 EETG-GKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~~-~~~~d~vid~~g~  228 (335)
                      +... -.++|.++.++|.
T Consensus        75 ~~~~~~~~id~vi~~ag~   92 (246)
T PRK05653         75 AAVEAFGALDILVNNAGI   92 (246)
T ss_pred             HHHHHhCCCCEEEECCCc
Confidence            2111 1358999998864

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.11  Score=45.61  Aligned_cols=77  Identities=22%  Similarity=0.309  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c-----CCCE-EE--eCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L-----GADV-CI--NYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~-----g~~~-~~--~~~~~~-~~-  207 (335)
                      .+.++||          .|+++.+|.+++..+...|++|+++.+++++.+.+.+ +     +... .+  |..+.. .. 
T Consensus         6 ~~k~vlV----------tGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (260)
T PRK07063          6 AGKVALV----------TGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAA   75 (260)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHH
Confidence            4678999          9999999999999999999999999998776654432 1     2211 12  333221 22 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  .++|++|.++|
T Consensus        76 ~~~~~~~~~--g~id~li~~ag   95 (260)
T PRK07063         76 AVAAAEEAF--GPLDVLVNNAG   95 (260)
T ss_pred             HHHHHHHHh--CCCcEEEECCC
Confidence              2222222  36899999887

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.41  E-value=0.14  Score=45.53  Aligned_cols=81  Identities=21%  Similarity=0.362  Sum_probs=61.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCC---CEEEeCCCcc-HHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGA---DVCINYKTED-FVA  208 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~---~~~~~~~~~~-~~~  208 (335)
                      +.|++.+|          .|++.++|.+-+.=+-.+|.+|+.+.|++++++..++     .+.   ..++|....+ ..+
T Consensus        47 ~~g~WAVV----------TGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye  116 (312)
T KOG1014|consen   47 KLGSWAVV----------TGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYE  116 (312)
T ss_pred             hcCCEEEE----------ECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHH
Confidence            34678888          9999999976554444489999999999999987752     232   2345776655 367


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+++.+.+-.+-+.++|+|.
T Consensus       117 ~i~~~l~~~~VgILVNNvG~  136 (312)
T KOG1014|consen  117 KLLEKLAGLDVGILVNNVGM  136 (312)
T ss_pred             HHHHHhcCCceEEEEecccc
Confidence            78888888888999999984

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.097  Score=45.63  Aligned_cols=78  Identities=19%  Similarity=0.275  Sum_probs=51.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~---~  207 (335)
                      .+.+++|          .|++|.+|..++..+...|++|+++++++++.+.+.    +.+... .  .|..+.. .   .
T Consensus         6 ~~k~ilI----------tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   75 (253)
T PRK06172          6 SGKVALV----------TGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALV   75 (253)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999998889999999999877654432    233222 2  2322221 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|+++.+.|.
T Consensus        76 ~~~~~~~--g~id~li~~ag~   94 (253)
T PRK06172         76 EQTIAAY--GRLDYAFNNAGI   94 (253)
T ss_pred             HHHHHHh--CCCCEEEECCCC
Confidence            2222222  268999998873

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.093  Score=46.14  Aligned_cols=78  Identities=31%  Similarity=0.440  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c--CCCE---EEeCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GADV---CINYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~--g~~~---~~~~~~~~-~~-  207 (335)
                      .+.++||          .|+++.+|.++++.+...|++|+++.+++++.+.+.+    .  +...   ..|-.+.+ .. 
T Consensus         7 ~~k~~lI----------tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   76 (265)
T PRK07062          7 EGRVAVV----------TGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAA   76 (265)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHH
Confidence            4678999          9999999999999999999999999998876654431    1  1111   12333322 21 


Q ss_pred             --HHHHHHhCCCcccEEEeCCCh
Q 019790          208 --ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g~  228 (335)
                        +.+.+..  .++|++++++|.
T Consensus        77 ~~~~~~~~~--g~id~li~~Ag~   97 (265)
T PRK07062         77 FAAAVEARF--GGVDMLVNNAGQ   97 (265)
T ss_pred             HHHHHHHhc--CCCCEEEECCCC
Confidence              2222222  368999999873

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.36  E-value=0.16  Score=45.15  Aligned_cols=96  Identities=14%  Similarity=0.135  Sum_probs=65.4

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +|+.....+..+....---.|.+++|          .|.+..+|..++.++...|++|++..+..               
T Consensus       138 ~PcTp~ai~~ll~~~~i~l~Gk~vvV----------IGrs~~VG~pla~lL~~~gatVtv~~s~t---------------  192 (286)
T PRK14175        138 VPCTPLGIMEILKHADIDLEGKNAVV----------IGRSHIVGQPVSKLLLQKNASVTILHSRS---------------  192 (286)
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEE----------ECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------
Confidence            45555555555533322346888999          89777799999999999999999887431               


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                          .    .+.+.+  +.+|+||.++|...+-.. +.++++-.++.+|...
T Consensus       193 ----~----~l~~~~--~~ADIVIsAvg~p~~i~~-~~vk~gavVIDvGi~~  233 (286)
T PRK14175        193 ----K----DMASYL--KDADVIVSAVGKPGLVTK-DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             ----h----hHHHHH--hhCCEEEECCCCCcccCH-HHcCCCcEEEEcCCCc
Confidence                1    122232  258999999998754222 4578887778888644

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.35  E-value=0.12  Score=45.28  Aligned_cols=78  Identities=29%  Similarity=0.415  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~---  207 (335)
                      .+.++||          .|++|.+|..+++.+...|++|++++++.++.+...    ..+... .  .|..+.. +.   
T Consensus        11 ~~k~ilI----------tGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~   80 (259)
T PRK08213         11 SGKTALV----------TGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLA   80 (259)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999877665443    222221 2  2333322 21   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|.+|.++|.
T Consensus        81 ~~~~~~~--~~id~vi~~ag~   99 (259)
T PRK08213         81 EETLERF--GHVDILVNNAGA   99 (259)
T ss_pred             HHHHHHh--CCCCEEEECCCC
Confidence            2222222  368999998873

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.33  E-value=0.23  Score=43.40  Aligned_cols=102  Identities=12%  Similarity=0.124  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHH----HcCCCEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~  206 (335)
                      ...+..+-.++|-          +|  ..+|..++.+|+.+  +.+|+.+..+++..+.++    ..|....+.....+.
T Consensus        73 ~l~~~~~ak~iLE----------iG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a  140 (247)
T PLN02589         73 MLLKLINAKNTME----------IG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPA  140 (247)
T ss_pred             HHHHHhCCCEEEE----------Ee--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccH
Confidence            3445555668888          77  68899999999987  568999999988776664    345333333344445


Q ss_pred             HHHHHHHhC----CCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790          207 VARVKEETG----GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       207 ~~~~~~~~~----~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (335)
                      .+.+.++..    ...||+||-=...    ..+..+++.|++||-++.
T Consensus       141 ~e~L~~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        141 LPVLDQMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             HHHHHHHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence            555555432    1479999854443    235777899999987664

>PRK06484 short chain dehydrogenase; Validated

Probab=95.31  E-value=0.087  Score=51.35  Aligned_cols=80  Identities=24%  Similarity=0.287  Sum_probs=54.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE---EEeCCCcc-HHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTED-FVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~-~~~~~~~~  213 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.++.++.+.+. +++...   ..|..+.. ..+.+.+.
T Consensus         4 ~~k~~lI----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (520)
T PRK06484          4 QSRVVLV----------TGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQL   73 (520)
T ss_pred             CCeEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHH
Confidence            5678999          999999999999999999999999999888766554 454332   23333322 22222221


Q ss_pred             h-CCCcccEEEeCCCh
Q 019790          214 T-GGKGVDVILDCMGA  228 (335)
Q Consensus       214 ~-~~~~~d~vid~~g~  228 (335)
                      . ...++|+++++.|.
T Consensus        74 ~~~~g~iD~li~nag~   89 (520)
T PRK06484         74 HREFGRIDVLVNNAGV   89 (520)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            1 11368999998863

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.30  E-value=0.11  Score=45.27  Aligned_cols=80  Identities=23%  Similarity=0.300  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCccHHHH-H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFVAR-V  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~~~-~  210 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+++.+++++.+.+.    +.+... .  .|..+...... +
T Consensus         9 ~~k~vlI----------tGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~   78 (255)
T PRK07523          9 TGRRALV----------TGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAI   78 (255)
T ss_pred             CCCEEEE----------ECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHH
Confidence            4678999          999999999999999889999999999877654432    223211 1  23333222111 1


Q ss_pred             HHH-hCCCcccEEEeCCCh
Q 019790          211 KEE-TGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~-~~~~~~d~vid~~g~  228 (335)
                      .+. ....++|++|.++|.
T Consensus        79 ~~~~~~~~~~d~li~~ag~   97 (255)
T PRK07523         79 DAFEAEIGPIDILVNNAGM   97 (255)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            111 112368999998873

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.29  E-value=0.11  Score=45.19  Aligned_cols=73  Identities=22%  Similarity=0.353  Sum_probs=47.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE-E--eCCCcc-HHHHHHHHh-CCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-I--NYKTED-FVARVKEET-GGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~-~--~~~~~~-~~~~~~~~~-~~~~~d~vid~~g~  228 (335)
                      .|++|.+|.+++..+...|++|+++++++++.+.+.. ++.... +  |-.+.. +.+.+.+.. ...++|.++.++|.
T Consensus         6 tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~   84 (248)
T PRK10538          6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGL   84 (248)
T ss_pred             ECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence            9999999999999999999999999999887666543 333221 2  222221 222222211 11368999998763

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.11  Score=45.09  Aligned_cols=78  Identities=23%  Similarity=0.313  Sum_probs=51.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--CCCE-EE--eCCCccH-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GADV-CI--NYKTEDF-VA---  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--g~~~-~~--~~~~~~~-~~---  208 (335)
                      ++.++||          .|++|.+|..+++.+...|++|+++.++.+..+...+ .  +... .+  |-.+... .+   
T Consensus         4 ~~k~~lI----------tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (252)
T PRK06138          4 AGRVAIV----------TGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVD   73 (252)
T ss_pred             CCcEEEE----------eCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            3568999          9999999999999888889999999998776544332 2  2221 22  3222221 11   


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+..  .++|+++.|+|.
T Consensus        74 ~i~~~~--~~id~vi~~ag~   91 (252)
T PRK06138         74 FVAARW--GRLDVLVNNAGF   91 (252)
T ss_pred             HHHHHc--CCCCEEEECCCC
Confidence            222222  368999998873

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.29  E-value=0.11  Score=45.07  Aligned_cols=40  Identities=28%  Similarity=0.323  Sum_probs=34.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      .+.++||          +|++|.+|..++..+...|++|++++|+.++..
T Consensus         5 ~~~~ilI----------tGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~   44 (251)
T PRK12826          5 EGRVALV----------TGAARGIGRAIAVRLAADGAEVIVVDICGDDAA   44 (251)
T ss_pred             CCCEEEE----------cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            3568999          999999999999998888999999999865543

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.28  Score=42.38  Aligned_cols=36  Identities=25%  Similarity=0.316  Sum_probs=31.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ++.++||          +|+++.+|..++..+...|++++++.++.
T Consensus         4 ~~~~vlI----------tG~~~~iG~~la~~l~~~g~~v~~~~~~~   39 (245)
T PRK12937          4 SNKVAIV----------TGASRGIGAAIARRLAADGFAVAVNYAGS   39 (245)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence            4568999          99999999999999999999988877643

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=95.27  E-value=0.35  Score=36.77  Aligned_cols=98  Identities=16%  Similarity=0.267  Sum_probs=62.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH----cCCC--EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGAD--VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~  205 (335)
                      ....+.++++++-          .| +|. |..+..+++..+ .+|++++.++...+.++.    .+..  .++..+...
T Consensus        13 ~~~~~~~~~~vld----------lG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~   80 (124)
T TIGR02469        13 SKLRLRPGDVLWD----------IG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPE   80 (124)
T ss_pred             HHcCCCCCCEEEE----------eC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccc
Confidence            3445667777777          77 444 888888888874 699999999887777643    3332  222221111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh----hHHHhhccccCCCEEEEE
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                         .....  ...||+|+-..+..    .+..+.+.|+++|+++..
T Consensus        81 ---~~~~~--~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        81 ---ALEDS--LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             ---cChhh--cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence               01111  13699999765432    357789999999999864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.27  E-value=0.11  Score=46.29  Aligned_cols=77  Identities=25%  Similarity=0.335  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~---  207 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++.+++++.+.+.    ..+... .+  |-.+.. +.   
T Consensus         5 ~~k~vlV----------TGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   74 (275)
T PRK05876          5 PGRGAVI----------TGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLA   74 (275)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999998876655432    233322 12  322221 11   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|+++|
T Consensus        75 ~~~~~~~--g~id~li~nAg   92 (275)
T PRK05876         75 DEAFRLL--GHVDVVFSNAG   92 (275)
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence            2222222  36899999887

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.25  E-value=0.071  Score=47.33  Aligned_cols=81  Identities=31%  Similarity=0.413  Sum_probs=54.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC------EEEeCCCccHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD------VCINYKTEDFV  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~------~~~~~~~~~~~  207 (335)
                      -.|..+||          +|++.++|.+++..+-..|++|+++.+++++.+....    .+..      ...|-.+....
T Consensus         6 l~gkvalV----------TG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   75 (270)
T KOG0725|consen    6 LAGKVALV----------TGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDV   75 (270)
T ss_pred             CCCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHH
Confidence            45778899          9999999999999999999999999999887655542    2221      12233322222


Q ss_pred             HHHHH-HhC--CCcccEEEeCCCh
Q 019790          208 ARVKE-ETG--GKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~-~~~--~~~~d~vid~~g~  228 (335)
                      +.+.+ ...  .+++|+.+++.|.
T Consensus        76 ~~l~~~~~~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   76 EKLVEFAVEKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHHHHHHHHHhCCCCCEEEEcCCc
Confidence            22222 111  2369999998874

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.23  E-value=0.21  Score=43.71  Aligned_cols=78  Identities=23%  Similarity=0.433  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCC-EEE--eCCCccHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GAD-VCI--NYKTEDFVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~-~~~--~~~~~~~~~~~  210 (335)
                      .+.++||          .|+++.+|..+++.+...|++|+++++++++.+.+.+ +    +.. ..+  |-.+..-...+
T Consensus         6 ~~k~vlI----------tG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   75 (259)
T PRK06125          6 AGKRVLI----------TGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQL   75 (259)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHH
Confidence            3678999          9999999999999999999999999998776655332 1    222 122  32222222222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|++|.|.|.
T Consensus        76 ~~~~--g~id~lv~~ag~   91 (259)
T PRK06125         76 AAEA--GDIDILVNNAGA   91 (259)
T ss_pred             HHHh--CCCCEEEECCCC
Confidence            2222  368999998873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.20  E-value=0.28  Score=42.56  Aligned_cols=101  Identities=19%  Similarity=0.265  Sum_probs=60.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhH----HHHHHcCCCE-EE--eCCCcc-H---H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADV-CI--NYKTED-F---V  207 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~----~~~~~~g~~~-~~--~~~~~~-~---~  207 (335)
                      +.++||          .|++|.+|..++..+...|++|+...++. ++.    ..+++.+... .+  |..+.. .   .
T Consensus         6 ~~~vli----------tGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (252)
T PRK06077          6 DKVVVV----------TGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLA   75 (252)
T ss_pred             CcEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHH
Confidence            568999          99999999999998888999988776532 222    1223333322 22  322221 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCCh----------h-h---------------HHHhhccccCCCEEEEEeccCC
Q 019790          208 ARVKEETGGKGVDVILDCMGA----------S-Y---------------FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~----------~-~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      +.+.+..  .++|.+|.++|.          . .               ...+.+.++..|+++.++....
T Consensus        76 ~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         76 KATIDRY--GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             HHHHHHc--CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            2222222  368999999873          0 0               1233455566789998876554

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.13  Score=44.79  Aligned_cols=78  Identities=19%  Similarity=0.312  Sum_probs=50.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEE--eCCCcc-HHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTED-FVARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~~~~~  211 (335)
                      +.++||          .|+++.+|..+++.+...|++|+++++++++.+.+.+    .+.. ..+  |-.+.. +.+.+.
T Consensus         1 ~k~~lI----------tG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   70 (252)
T PRK07677          1 EKVVII----------TGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVE   70 (252)
T ss_pred             CCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            357889          9999999999999999999999999998776654432    2222 122  333322 222222


Q ss_pred             HHh-CCCcccEEEeCCC
Q 019790          212 EET-GGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~-~~~~~d~vid~~g  227 (335)
                      +.. ...++|++++++|
T Consensus        71 ~~~~~~~~id~lI~~ag   87 (252)
T PRK07677         71 QIDEKFGRIDALINNAA   87 (252)
T ss_pred             HHHHHhCCccEEEECCC
Confidence            211 1136899999886

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.15  E-value=0.14  Score=44.77  Aligned_cols=76  Identities=20%  Similarity=0.360  Sum_probs=51.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE-EE--eCCCcc-HHH---HHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CI--NYKTED-FVA---RVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~-~~--~~~~~~-~~~---~~~  211 (335)
                      +.++||          +|+++.+|..++..+...|++|++++++.++.+.+.+ ++... .+  |-.+.. ...   .+.
T Consensus         6 ~~~vlI----------tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (257)
T PRK07067          6 GKVALL----------TGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAV   75 (257)
T ss_pred             CCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            568999          9999999999999999999999999998887665543 33221 12  322222 222   222


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +..  .++|+++.+.|
T Consensus        76 ~~~--~~id~li~~ag   89 (257)
T PRK07067         76 ERF--GGIDILFNNAA   89 (257)
T ss_pred             HHc--CCCCEEEECCC
Confidence            222  36899999876

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.13  Score=44.87  Aligned_cols=78  Identities=22%  Similarity=0.260  Sum_probs=49.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HH----HHHHcCCCE-EE--eCCCcc-HHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-CI--NYKTED-FVA-  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~----~~~~~g~~~-~~--~~~~~~-~~~-  208 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.++.+. .+    .++..+... .+  |-.+.. ..+ 
T Consensus         7 ~~k~~lV----------tG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~   76 (254)
T PRK06114          7 DGQVAFV----------TGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAA   76 (254)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4668999          9999999999999999999999999876432 22    222333222 12  222221 222 


Q ss_pred             --HHHHHhCCCcccEEEeCCCh
Q 019790          209 --RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 --~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+..  .++|++|.|.|.
T Consensus        77 ~~~~~~~~--g~id~li~~ag~   96 (254)
T PRK06114         77 VARTEAEL--GALTLAVNAAGI   96 (254)
T ss_pred             HHHHHHHc--CCCCEEEECCCC
Confidence              222222  368999999873

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.14  E-value=0.1  Score=45.64  Aligned_cols=77  Identities=21%  Similarity=0.251  Sum_probs=49.8

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC--EE--EeCCCcc-H---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VC--INYKTED-F---VA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~-~---~~  208 (335)
                      .+.++||          .|++  +++|.++++.+-..|++|+++.++++..+.++++...  ..  .|-.+.. .   .+
T Consensus         6 ~~k~~lI----------tGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   75 (252)
T PRK06079          6 SGKKIVV----------MGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFA   75 (252)
T ss_pred             CCCEEEE----------eCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHH
Confidence            4678999          9988  7999999999988999999998875434444443211  11  2332221 2   22


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++++++|
T Consensus        76 ~~~~~~--g~iD~lv~nAg   92 (252)
T PRK06079         76 TIKERV--GKIDGIVHAIA   92 (252)
T ss_pred             HHHHHh--CCCCEEEEccc
Confidence            222222  36999999887

>PRK09242 tropinone reductase; Provisional

Probab=95.14  E-value=0.14  Score=44.67  Aligned_cols=78  Identities=22%  Similarity=0.352  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c--CCCE-E--EeCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GADV-C--INYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~--g~~~-~--~~~~~~~-~~-  207 (335)
                      .+.++||          .|+++.+|..++..+...|++|++++++.+..+.+.+    .  +.+. .  .|..+.+ .. 
T Consensus         8 ~~k~~lI----------tGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~   77 (257)
T PRK09242          8 DGQTALI----------TGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRA   77 (257)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHH
Confidence            4678999          9999999999999999999999999998876654432    1  2221 1  1333322 11 


Q ss_pred             --HHHHHHhCCCcccEEEeCCCh
Q 019790          208 --ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g~  228 (335)
                        +.+.+..  .++|+++.+.|.
T Consensus        78 ~~~~~~~~~--g~id~li~~ag~   98 (257)
T PRK09242         78 ILDWVEDHW--DGLHILVNNAGG   98 (257)
T ss_pred             HHHHHHHHc--CCCCEEEECCCC
Confidence              2222222  369999999974

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.14  E-value=0.093  Score=43.00  Aligned_cols=94  Identities=20%  Similarity=0.233  Sum_probs=62.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC-----------------CccHHHHHHHHhCCCc
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-----------------TEDFVARVKEETGGKG  218 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~~~~~~~~~~~~~~~  218 (335)
                      +| +|.+|.-|+.+++.+|++|++.+...++.+.....+...+....                 .......+.+..  ..
T Consensus        26 ~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i--~~  102 (168)
T PF01262_consen   26 TG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAEFI--AP  102 (168)
T ss_dssp             ES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHHHH--HH
T ss_pred             EC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHHHH--hh
Confidence            66 89999999999999999999999999888888877765433210                 122233334433  25


Q ss_pred             ccEEEeCC---Chh--h--HHHhhccccCCCEEEEEeccCC
Q 019790          219 VDVILDCM---GAS--Y--FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       219 ~d~vid~~---g~~--~--~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      +|+++.+.   +..  .  ....++.|+++.-++.+....+
T Consensus       103 ~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g  143 (168)
T PF01262_consen  103 ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG  143 (168)
T ss_dssp             -SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred             CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence            89998533   211  1  2667888998888888754443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.14  Score=43.97  Aligned_cols=71  Identities=15%  Similarity=0.253  Sum_probs=47.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .|+++.+|.++++.+...|++|+++.+++++.+.+. +.+...+ .|-.+....+.+.+... ..+|+++++.|
T Consensus         6 tGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          6 TGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             EeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence            999999999999999889999999999887766553 3443322 23333322222333222 25899998865

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.15  Score=44.60  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=50.2

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCC--C-EE--EeCCCcc-HHHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VC--INYKTED-FVARVKEE  213 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~--~-~~--~~~~~~~-~~~~~~~~  213 (335)
                      .++||          +|+++.+|..++..+...|++|++++++.++.+.+.+ +..  + ..  .|-.+.. +.+.+.+.
T Consensus         3 ~~vlI----------tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~   72 (257)
T PRK07024          3 LKVFI----------TGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF   72 (257)
T ss_pred             CEEEE----------EcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHH
Confidence            57899          9999999999999999899999999998877655433 211  1 11  2333322 22222222


Q ss_pred             hC-CCcccEEEeCCC
Q 019790          214 TG-GKGVDVILDCMG  227 (335)
Q Consensus       214 ~~-~~~~d~vid~~g  227 (335)
                      .. ...+|+++.++|
T Consensus        73 ~~~~g~id~lv~~ag   87 (257)
T PRK07024         73 IAAHGLPDVVIANAG   87 (257)
T ss_pred             HHhCCCCCEEEECCC
Confidence            11 125899999886

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.11  E-value=0.18  Score=43.60  Aligned_cols=102  Identities=21%  Similarity=0.265  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHc----CCCE-E-EeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDL----GADV-C-INYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~----g~~~-~-~~~~~~~  205 (335)
                      ......+|+++|=          .+  ++.|-.+..+++..| ++|++++-|+..++.+++-    +... - +..+.. 
T Consensus        45 ~~~~~~~g~~vLD----------va--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe-  111 (238)
T COG2226          45 SLLGIKPGDKVLD----------VA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAE-  111 (238)
T ss_pred             HhhCCCCCCEEEE----------ec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechh-
Confidence            4445568999987          54  678888889999886 4899999999998888642    2211 1 111111 


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEeccCC
Q 019790          206 FVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                         .+-  ...+.||++.-+.|-       ..+.++.+.|+|+|+++.+.....
T Consensus       112 ---~LP--f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p  160 (238)
T COG2226         112 ---NLP--FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP  160 (238)
T ss_pred             ---hCC--CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence               111  233578888776663       346889999999999988866553

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.11  E-value=0.16  Score=44.10  Aligned_cols=77  Identities=17%  Similarity=0.231  Sum_probs=50.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~----~  207 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+++.++++..+.+.    +.+.. ..  .|..+..-    .
T Consensus         5 ~~k~vlI----------tGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (250)
T PRK07774          5 DDKVAIV----------TGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMA   74 (250)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            4568999          999999999999999889999999999876554332    22222 11  23332221    1


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|.++|
T Consensus        75 ~~~~~~~--~~id~vi~~ag   92 (250)
T PRK07774         75 DATVSAF--GGIDYLVNNAA   92 (250)
T ss_pred             HHHHHHh--CCCCEEEECCC
Confidence            2222222  25899999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.11  E-value=0.15  Score=46.07  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=35.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  189 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~  189 (335)
                      .+.++||          .|+++.+|..+++.+...|++|++++++.++.+.
T Consensus        15 ~~k~vlI----------tGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~   55 (306)
T PRK06197         15 SGRVAVV----------TGANTGLGYETAAALAAKGAHVVLAVRNLDKGKA   55 (306)
T ss_pred             CCCEEEE----------cCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            5678999          9999999999999888889999999998776543

>PRK08264 short chain dehydrogenase; Validated

Probab=95.09  E-value=0.18  Score=43.45  Aligned_cols=75  Identities=25%  Similarity=0.416  Sum_probs=50.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCE-E--EeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADV-C--INYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~--~~~~~~~~~~~~~~~~  214 (335)
                      .+.++||          +||+|.+|..+++.+...|+ +|+++.++.++.+.   .+... .  .|..+..-...+.+..
T Consensus         5 ~~~~vlI----------tGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~   71 (238)
T PRK08264          5 KGKVVLV----------TGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA   71 (238)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc
Confidence            4568999          99999999999999999999 99999988766543   22221 1  2333322222222222


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                        .++|++|.++|.
T Consensus        72 --~~id~vi~~ag~   83 (238)
T PRK08264         72 --SDVTILVNNAGI   83 (238)
T ss_pred             --CCCCEEEECCCc
Confidence              358999998876

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.09  E-value=0.07  Score=51.65  Aligned_cols=73  Identities=19%  Similarity=0.249  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhC
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      .+.++++++|          +| .|..|++++++++..|++|++.+..+.+.+.+++.|.... ....  ..+.+     
T Consensus         8 ~~~~~~~v~V----------~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~--~~~~l-----   68 (488)
T PRK03369          8 PLLPGAPVLV----------AG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD--AVQQI-----   68 (488)
T ss_pred             cccCCCeEEE----------Ec-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc--hHhHh-----
Confidence            3567889999          88 8999999999999999999999977666666667776433 2111  11122     


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                       ..+|+|+.+.|-
T Consensus        69 -~~~D~VV~SpGi   80 (488)
T PRK03369         69 -ADYALVVTSPGF   80 (488)
T ss_pred             -hcCCEEEECCCC
Confidence             247999998874

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.12  Score=44.67  Aligned_cols=71  Identities=15%  Similarity=0.075  Sum_probs=45.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-E--EEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V--CINYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~--~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .|++|.+|..++..+...|++|++++|++++.+.+.+.+.. .  ..|-.+.+-.+.+.+.... ..|.++.++|
T Consensus         7 tGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~d~~i~~ag   80 (240)
T PRK06101          7 TGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF-IPELWIFNAG   80 (240)
T ss_pred             EcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc-CCCEEEEcCc
Confidence            99999999998888888899999999998887766543311 1  2333333222223333222 3577666654

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.095  Score=45.18  Aligned_cols=78  Identities=12%  Similarity=0.143  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~---  207 (335)
                      .+.+++|          .|+++++|.+.+..+...|++|+++.+++++.+.+.    +.+... .+  |-.+.. ..   
T Consensus         4 ~~k~~lV----------tGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~   73 (227)
T PRK08862          4 KSSIILI----------TSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLF   73 (227)
T ss_pred             CCeEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999888765543    334332 22  222222 22   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+ .++|++|.++|
T Consensus        74 ~~~~~~~g-~~iD~li~nag   92 (227)
T PRK08862         74 DAIEQQFN-RAPDVLVNNWT   92 (227)
T ss_pred             HHHHHHhC-CCCCEEEECCc
Confidence            22222222 26999999986

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.08  E-value=0.15  Score=45.20  Aligned_cols=79  Identities=14%  Similarity=0.221  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~  210 (335)
                      .+.+++|          .|+++.+|.+++..+...|++|+++.++++..+.+.    ..+... .  .|..+.. ....+
T Consensus         9 ~~k~vlV----------tGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   78 (278)
T PRK08277          9 KGKVAVI----------TGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQAR   78 (278)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999876554432    223221 1  2332222 22212


Q ss_pred             HHHhC-CCcccEEEeCCC
Q 019790          211 KEETG-GKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~-~~~~d~vid~~g  227 (335)
                      .+... ..++|++|.++|
T Consensus        79 ~~~~~~~g~id~li~~ag   96 (278)
T PRK08277         79 QQILEDFGPCDILINGAG   96 (278)
T ss_pred             HHHHHHcCCCCEEEECCC
Confidence            21111 136899999887

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.08  E-value=0.12  Score=44.80  Aligned_cols=101  Identities=18%  Similarity=0.285  Sum_probs=71.2

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHH----HcCCCEEEeCCCcc
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTED  205 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~  205 (335)
                      ....++.+|++|+-          .|  .+.|.++..+|+..|.  +|+.....++..+.++    +++....+.....+
T Consensus        87 ~~~~gi~pg~rVlE----------AG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D  154 (256)
T COG2519          87 VARLGISPGSRVLE----------AG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD  154 (256)
T ss_pred             HHHcCCCCCCEEEE----------cc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc
Confidence            35689999999999          55  5578889999998875  8999998887766664    34433222223333


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .    .+...+..+|.+|-=...  ..++.+.+.|+++|.++.+-
T Consensus       155 v----~~~~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~  195 (256)
T COG2519         155 V----REGIDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS  195 (256)
T ss_pred             c----cccccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence            3    333333479988765555  45789999999999998874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.08  E-value=0.12  Score=45.29  Aligned_cols=79  Identities=23%  Similarity=0.320  Sum_probs=50.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH---HcCCCE---EEeCCCcc-HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV---CINYKTED-FVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~g~~~---~~~~~~~~-~~~~~~  211 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++...+...   ..+.+.   ..|..+.. ..+.+.
T Consensus         7 ~~k~vlV----------tGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK12823          7 AGKVVVV----------TGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMA   76 (260)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHH
Confidence            4578999          999999999999999999999999998754332222   233322   22433322 222222


Q ss_pred             HHhC-CCcccEEEeCCC
Q 019790          212 EETG-GKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~-~~~~d~vid~~g  227 (335)
                      +... ..++|+++.++|
T Consensus        77 ~~~~~~~~id~lv~nAg   93 (260)
T PRK12823         77 AAVEAFGRIDVLINNVG   93 (260)
T ss_pred             HHHHHcCCCeEEEECCc
Confidence            2111 136899999886

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.05  E-value=0.08  Score=44.62  Aligned_cols=96  Identities=16%  Similarity=0.088  Sum_probs=58.7

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~  210 (335)
                      ....++.++|-          .|  ++.|..+..+++. |.+|++++.+++..+.+++    .+...+ .....++    
T Consensus        26 l~~~~~~~vLD----------iG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~----   87 (197)
T PRK11207         26 VKVVKPGKTLD----------LG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDL----   87 (197)
T ss_pred             cccCCCCcEEE----------EC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecCh----
Confidence            34456678888          66  4457788888875 8899999999887776653    222111 1111111    


Q ss_pred             HHHhCCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEe
Q 019790          211 KEETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .+..-...||+|+.+..-         ..+..+.+.|+++|.++.+.
T Consensus        88 ~~~~~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         88 NNLTFDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             hhCCcCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            111112369999875431         22466788899999975543

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.04  E-value=0.26  Score=43.21  Aligned_cols=79  Identities=14%  Similarity=0.225  Sum_probs=48.0

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecCh---hhHHHHH-Hc-CCCE-E--EeCCCcc-HH
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DL-GADV-C--INYKTED-FV  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~-~~-g~~~-~--~~~~~~~-~~  207 (335)
                      .+.+++|          +|++  +++|.++++.+-..|++|+++.++.   ++.+.+. ++ +... .  .|-.+.. ..
T Consensus         6 ~~k~~lI----------tGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   75 (257)
T PRK08594          6 EGKTYVV----------MGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEIT   75 (257)
T ss_pred             CCCEEEE----------ECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHH
Confidence            4678899          9986  7999999999988999999987643   3333333 23 2211 1  2333322 22


Q ss_pred             HHHHHHhC-CCcccEEEeCCC
Q 019790          208 ARVKEETG-GKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~-~~~~d~vid~~g  227 (335)
                      +.+.+... -.++|++++|+|
T Consensus        76 ~~~~~~~~~~g~ld~lv~nag   96 (257)
T PRK08594         76 ACFETIKEEVGVIHGVAHCIA   96 (257)
T ss_pred             HHHHHHHHhCCCccEEEECcc
Confidence            22222211 136999999876

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.13  Score=45.51  Aligned_cols=41  Identities=32%  Similarity=0.474  Sum_probs=35.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  189 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~  189 (335)
                      ++.++||          .|++|.+|..+++.+...|++|+++.+++++.+.
T Consensus         6 ~~k~vlI----------tGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~   46 (276)
T PRK05875          6 QDRTYLV----------TGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA   46 (276)
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            3578999          9999999999999999999999999988766543

>PRK08589 short chain dehydrogenase; Validated

Probab=95.03  E-value=0.12  Score=45.76  Aligned_cols=77  Identities=21%  Similarity=0.313  Sum_probs=49.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE---EEeCCCcc-H---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV---CINYKTED-F---VA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~-~---~~  208 (335)
                      .+.++||          .|+++.+|.+++..+...|++|+++.++++..+.+.+   .+...   ..|-.+.. .   .+
T Consensus         5 ~~k~vlI----------tGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   74 (272)
T PRK08589          5 ENKVAVI----------TGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFAS   74 (272)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHH
Confidence            4678999          9999999999999988899999999988332222222   23221   22333322 2   22


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++|+++|
T Consensus        75 ~~~~~~--g~id~li~~Ag   91 (272)
T PRK08589         75 EIKEQF--GRVDVLFNNAG   91 (272)
T ss_pred             HHHHHc--CCcCEEEECCC
Confidence            222222  36899999886

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.02  E-value=0.16  Score=44.89  Aligned_cols=78  Identities=22%  Similarity=0.271  Sum_probs=51.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE---EEeCCCcc-HHHHHHHHh-
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV---CINYKTED-FVARVKEET-  214 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~-~~~~~~~~~-  214 (335)
                      .++||          +|++|.+|..+++.+...|++|+++.+++++.+.+++ .+...   ..|..+.. ..+.+.+.. 
T Consensus         3 k~vlV----------tGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (276)
T PRK06482          3 KTWFI----------TGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA   72 (276)
T ss_pred             CEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46889          9999999999999988899999999999887766654 22221   12333322 222222211 


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                      ...++|++|.++|.
T Consensus        73 ~~~~id~vi~~ag~   86 (276)
T PRK06482         73 ALGRIDVVVSNAGY   86 (276)
T ss_pred             HcCCCCEEEECCCC
Confidence            12368999998863

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.00  E-value=0.16  Score=44.51  Aligned_cols=77  Identities=19%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE---EEeCCCcc-HH---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV---CINYKTED-FV---A  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~---~~~~~~~~-~~---~  208 (335)
                      .+.++||          +|+++.+|..++..+...|++|+++.++++..+..++   .+...   ..|..+.. ..   +
T Consensus         5 ~~~~~lI----------tG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   74 (263)
T PRK08226          5 TGKTALI----------TGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIK   74 (263)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHH
Confidence            4578999          9999999999999999999999999988754333322   23221   12333322 11   1


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++|.++|
T Consensus        75 ~~~~~~--~~id~vi~~ag   91 (263)
T PRK08226         75 RAKEKE--GRIDILVNNAG   91 (263)
T ss_pred             HHHHHc--CCCCEEEECCC
Confidence            222222  36899999887

>PRK08643 acetoin reductase; Validated

Probab=94.99  E-value=0.16  Score=44.32  Aligned_cols=77  Identities=19%  Similarity=0.280  Sum_probs=50.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCccH-H---H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF-V---A  208 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~-~---~  208 (335)
                      +.++||          +|+++.+|..+++.+...|++|+++.++.++.+.+.    ..+... .+  |-.+... .   +
T Consensus         2 ~k~~lI----------tGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   71 (256)
T PRK08643          2 SKVALV----------TGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVR   71 (256)
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            457889          999999999999999999999999999876654443    223222 12  3333221 1   2


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+..  .++|++|.|+|.
T Consensus        72 ~~~~~~--~~id~vi~~ag~   89 (256)
T PRK08643         72 QVVDTF--GDLNVVVNNAGV   89 (256)
T ss_pred             HHHHHc--CCCCEEEECCCC
Confidence            222222  368999998863

>PRK07326 short chain dehydrogenase; Provisional

Probab=94.98  E-value=0.12  Score=44.42  Aligned_cols=80  Identities=26%  Similarity=0.395  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC---CCEEE--eCCCc-cHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTE-DFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~-~~~~~~~  211 (335)
                      .+.+++|          +|++|.+|..+++.+...|++|+++++++++.+.+. ++.   .-..+  |..+. .+.+.+.
T Consensus         5 ~~~~ilI----------tGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~   74 (237)
T PRK07326          5 KGKVALI----------TGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVD   74 (237)
T ss_pred             CCCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHH
Confidence            3578999          999999999999988888999999999887665443 332   11122  32322 2222222


Q ss_pred             HHhC-CCcccEEEeCCCh
Q 019790          212 EETG-GKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~~-~~~~d~vid~~g~  228 (335)
                      +... ..++|++|.+.|.
T Consensus        75 ~~~~~~~~~d~vi~~ag~   92 (237)
T PRK07326         75 AIVAAFGGLDVLIANAGV   92 (237)
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            2211 1368999998763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.98  E-value=0.17  Score=44.17  Aligned_cols=78  Identities=18%  Similarity=0.350  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVA--  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~--  208 (335)
                      .+.++||          +||++.+|.+++..+...|++|+++.+++++.+.+.    ..+... .+  |-.+.+ +.+  
T Consensus         8 ~~k~~lI----------tGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~   77 (254)
T PRK08085          8 AGKNILI----------TGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAI   77 (254)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999876654432    223221 22  322222 111  


Q ss_pred             -HHHHHhCCCcccEEEeCCCh
Q 019790          209 -RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+..  .++|+++.+.|.
T Consensus        78 ~~~~~~~--~~id~vi~~ag~   96 (254)
T PRK08085         78 EHIEKDI--GPIDVLINNAGI   96 (254)
T ss_pred             HHHHHhc--CCCCEEEECCCc
Confidence             222222  368999998873

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.19  Score=43.34  Aligned_cols=80  Identities=20%  Similarity=0.219  Sum_probs=51.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-EE--eCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~-~~~~~  210 (335)
                      ...++||          .|++|.+|..++..+...|++|+++++++++.+.+.+    .+... .+  |-.+.+ ....+
T Consensus         5 ~~k~vlI----------tG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   74 (241)
T PRK07454          5 SMPRALI----------TGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGI   74 (241)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH
Confidence            4567899          9999999999999999999999999998876554432    22222 22  222222 11222


Q ss_pred             HHHh-CCCcccEEEeCCCh
Q 019790          211 KEET-GGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~-~~~~~d~vid~~g~  228 (335)
                      .+.. ...+.|+++.++|.
T Consensus        75 ~~~~~~~~~id~lv~~ag~   93 (241)
T PRK07454         75 AELLEQFGCPDVLINNAGM   93 (241)
T ss_pred             HHHHHHcCCCCEEEECCCc
Confidence            2211 11358999999873

>PRK05717 oxidoreductase; Validated

Probab=94.95  E-value=0.18  Score=44.06  Aligned_cols=80  Identities=24%  Similarity=0.258  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCE-E--EeCCCcc-HHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADV-C--INYKTED-FVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~-~--~~~~~~~-~~~~~~~~  213 (335)
                      .+.++||          +|++|.+|..++..+...|++|+++.++..+.+.. +.++... .  .|..+.. ..+.+.+.
T Consensus         9 ~~k~vlI----------tG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          9 NGRVALV----------TGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCCEEEE----------eCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            4678999          99999999999999988999999998876655443 3344221 1  2333322 11112222


Q ss_pred             hC-CCcccEEEeCCCh
Q 019790          214 TG-GKGVDVILDCMGA  228 (335)
Q Consensus       214 ~~-~~~~d~vid~~g~  228 (335)
                      .. ..++|++|.++|.
T Consensus        79 ~~~~g~id~li~~ag~   94 (255)
T PRK05717         79 LGQFGRLDALVCNAAI   94 (255)
T ss_pred             HHHhCCCCEEEECCCc
Confidence            11 1258999998873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.92  E-value=0.18  Score=44.40  Aligned_cols=78  Identities=22%  Similarity=0.323  Sum_probs=51.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~----~  207 (335)
                      .+.++||          .|+++.+|..++..+...|++|+++.+++++.+.+.    ..+... .  .|-.+..-    .
T Consensus         9 ~~k~~lI----------tGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   78 (265)
T PRK07097          9 KGKIALI----------TGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMV   78 (265)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999988889999999998877654432    234322 1  23332221    1


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      ..+.+..  .++|.++.++|.
T Consensus        79 ~~~~~~~--~~id~li~~ag~   97 (265)
T PRK07097         79 SQIEKEV--GVIDILVNNAGI   97 (265)
T ss_pred             HHHHHhC--CCCCEEEECCCC
Confidence            2222222  368999998873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.90  E-value=0.18  Score=44.05  Aligned_cols=78  Identities=17%  Similarity=0.227  Sum_probs=49.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh--hHHHHHHcCCCE-E--EeCCCc-cH---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADV-C--INYKTE-DF---VAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~g~~~-~--~~~~~~-~~---~~~  209 (335)
                      .+.++||          .|+++.+|.++++.+...|++|+.+.++..  ..+.+++.+... .  .|-.+. ..   .+.
T Consensus         9 ~~k~~lI----------tG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   78 (253)
T PRK08993          9 EGKVAVV----------TGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLER   78 (253)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            3678999          999999999999999999999998765432  223333444222 1  232221 12   222


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+..  .++|+++.|+|.
T Consensus        79 ~~~~~--~~~D~li~~Ag~   95 (253)
T PRK08993         79 AVAEF--GHIDILVNNAGL   95 (253)
T ss_pred             HHHHh--CCCCEEEECCCC
Confidence            22222  368999998873

>PRK12828 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.13  Score=44.23  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=50.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH----HHHcCCCEE-EeCCCcc-HH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVC-INYKTED-FV---AR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~----~~~~g~~~~-~~~~~~~-~~---~~  209 (335)
                      ++.++||          +|++|.+|..+++.+...|++|++++++.++...    +...+...+ .|-.+.. +.   +.
T Consensus         6 ~~k~vlI----------tGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (239)
T PRK12828          6 QGKVVAI----------TGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDE   75 (239)
T ss_pred             CCCEEEE----------ECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHH
Confidence            3678999          9999999999999998889999999997665332    222333221 2322222 11   12


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+..  .++|+++.++|.
T Consensus        76 ~~~~~--~~~d~vi~~ag~   92 (239)
T PRK12828         76 VNRQF--GRLDALVNIAGA   92 (239)
T ss_pred             HHHHh--CCcCEEEECCcc
Confidence            22222  268999998763

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.17  Score=44.61  Aligned_cols=73  Identities=21%  Similarity=0.246  Sum_probs=46.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCccHHHHHHHHh--CCCcccEEEeCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTEDFVARVKEET--GGKGVDVILDCM  226 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~~~~~~~~~~--~~~~~d~vid~~  226 (335)
                      +|++|.+|..++..+...|++|++++++.++.+.+.    ..+.+.. +  |-.+..-...+.+..  ...++|++|.++
T Consensus         6 tGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~a   85 (270)
T PRK05650          6 TGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNA   85 (270)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            999999999999998889999999999877655432    2333321 2  222221111111111  113699999988


Q ss_pred             Ch
Q 019790          227 GA  228 (335)
Q Consensus       227 g~  228 (335)
                      |.
T Consensus        86 g~   87 (270)
T PRK05650         86 GV   87 (270)
T ss_pred             CC
Confidence            74

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.88  E-value=0.21  Score=43.12  Aligned_cols=79  Identities=23%  Similarity=0.339  Sum_probs=50.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~~  211 (335)
                      +.+++|          .|++|.+|..++..+...|++|+++++++++.+...    ..+... .+  |..+.. +.+.+.
T Consensus         7 ~~~vlV----------tG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   76 (239)
T PRK07666          7 GKNALI----------TGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIE   76 (239)
T ss_pred             CCEEEE----------EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHH
Confidence            567999          999999999999998889999999999877654432    223222 12  222221 222222


Q ss_pred             HHh-CCCcccEEEeCCCh
Q 019790          212 EET-GGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~-~~~~~d~vid~~g~  228 (335)
                      +.. ...++|.+|.+.|.
T Consensus        77 ~~~~~~~~id~vi~~ag~   94 (239)
T PRK07666         77 QLKNELGSIDILINNAGI   94 (239)
T ss_pred             HHHHHcCCccEEEEcCcc
Confidence            211 11368999998864

>PRK08703 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.13  Score=44.51  Aligned_cols=79  Identities=27%  Similarity=0.465  Sum_probs=52.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC-C---EEEeCCC---ccH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D---VCINYKT---EDF-  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~-~---~~~~~~~---~~~-  206 (335)
                      ++.+++|          +|++|.+|..+++.+...|++|++++|++++.+.+.+    .+. .   ...|..+   ..+ 
T Consensus         5 ~~k~vlI----------tG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   74 (239)
T PRK08703          5 SDKTILV----------TGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFE   74 (239)
T ss_pred             CCCEEEE----------ECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHH
Confidence            3568999          9999999999999999999999999998876654421    221 1   1123221   122 


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 --VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+.+... ..+|.+|.++|.
T Consensus        75 ~~~~~i~~~~~-~~id~vi~~ag~   97 (239)
T PRK08703         75 QFAATIAEATQ-GKLDGIVHCAGY   97 (239)
T ss_pred             HHHHHHHHHhC-CCCCEEEEeccc
Confidence              223333332 268999998873

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.19  Score=45.39  Aligned_cols=35  Identities=31%  Similarity=0.362  Sum_probs=32.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      .+.++||          +||++++|.++++.+...|++|+++.++
T Consensus         7 ~~k~~lI----------TGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALV----------AGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            4678999          9999999999999999999999999886

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.84  E-value=0.23  Score=44.03  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=49.4

Q ss_pred             CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHH---HH-HHcCCCEEE--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLA---VC-KDLGADVCI--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~---~~-~~~g~~~~~--~~~~~~-~~--  207 (335)
                      .+..+||          +|+++  ++|.++++.+...|++|+++.++++..+   .+ ++.+....+  |-.+.. ..  
T Consensus         6 ~~k~~lV----------TGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~   75 (271)
T PRK06505          6 QGKRGLI----------MGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAV   75 (271)
T ss_pred             CCCEEEE----------eCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHH
Confidence            4678999          99875  9999999999999999999887653222   22 234433222  333322 22  


Q ss_pred             -HHHHHHhCCCcccEEEeCCC
Q 019790          208 -ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+..  .++|++++++|
T Consensus        76 ~~~~~~~~--g~iD~lVnnAG   94 (271)
T PRK06505         76 FEALEKKW--GKLDFVVHAIG   94 (271)
T ss_pred             HHHHHHHh--CCCCEEEECCc
Confidence             2222222  36999999887

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.83  E-value=0.16  Score=46.16  Aligned_cols=72  Identities=21%  Similarity=0.298  Sum_probs=51.2

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCCccc
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      +|+|          +||+|-+|..++..+...|.+|++++|+.++...+...+...+. |..+   .+.+.+...  ++|
T Consensus         2 kIlV----------tGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~~~l~~al~--g~d   66 (317)
T CHL00194          2 SLLV----------IGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSL---PETLPPSFK--GVT   66 (317)
T ss_pred             EEEE----------ECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCC---HHHHHHHHC--CCC
Confidence            6889          99999999999999999999999999987665555545554332 2222   223444443  589


Q ss_pred             EEEeCCCh
Q 019790          221 VILDCMGA  228 (335)
Q Consensus       221 ~vid~~g~  228 (335)
                      +||.+++.
T Consensus        67 ~Vi~~~~~   74 (317)
T CHL00194         67 AIIDASTS   74 (317)
T ss_pred             EEEECCCC
Confidence            99998753

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.14  Score=44.73  Aligned_cols=38  Identities=29%  Similarity=0.400  Sum_probs=33.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      .+.++||          +|+++.+|..+++.+...|++|++++++++.
T Consensus         5 ~~k~~lI----------tGas~gIG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856          5 TGRVVLV----------TGGTRGIGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            4678999          9999999999999999999999999988654

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.80  E-value=0.18  Score=44.06  Aligned_cols=77  Identities=19%  Similarity=0.331  Sum_probs=49.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-EE--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~-~---~  207 (335)
                      .+.++||          +|+++.+|.+.++.+...|++|+++.++ ++.+.+    .+.+... .+  |-.+.. .   .
T Consensus        14 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   82 (258)
T PRK06935         14 DGKVAIV----------TGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVV   82 (258)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999887 332222    2333322 22  333222 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|+++.+.|.
T Consensus        83 ~~~~~~~--g~id~li~~ag~  101 (258)
T PRK06935         83 KEALEEF--GKIDILVNNAGT  101 (258)
T ss_pred             HHHHHHc--CCCCEEEECCCC
Confidence            2222222  368999998873

>PRK06179 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.077  Score=46.81  Aligned_cols=77  Identities=27%  Similarity=0.368  Sum_probs=49.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHh-CC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVARVKEET-GG  216 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~-~~  216 (335)
                      +.+++|          +|++|.+|..+++.+...|++|++++++.++.+...  +... ..|..+.. +.+.+.... ..
T Consensus         4 ~~~vlV----------tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~   71 (270)
T PRK06179          4 SKVALV----------TGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP--GVELLELDVTDDASVQAAVDEVIARA   71 (270)
T ss_pred             CCEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccC--CCeeEEeecCCHHHHHHHHHHHHHhC
Confidence            457899          999999999999999899999999998866543221  2221 23433322 222222211 11


Q ss_pred             CcccEEEeCCCh
Q 019790          217 KGVDVILDCMGA  228 (335)
Q Consensus       217 ~~~d~vid~~g~  228 (335)
                      .++|++|.|+|.
T Consensus        72 g~~d~li~~ag~   83 (270)
T PRK06179         72 GRIDVLVNNAGV   83 (270)
T ss_pred             CCCCEEEECCCC
Confidence            368999999984

>PRK09186 flagellin modification protein A; Provisional

Probab=94.79  E-value=0.2  Score=43.63  Aligned_cols=79  Identities=15%  Similarity=0.203  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc----CCC---E-EEeCCCcc-HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD---V-CINYKTED-FVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~----g~~---~-~~~~~~~~-~~~  208 (335)
                      .+.++||          .|+++.+|..++..+...|++|+++.+++++.+.+. ++    +..   . ..|-.+.. +.+
T Consensus         3 ~~k~vlI----------tGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~   72 (256)
T PRK09186          3 KGKTILI----------TGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEE   72 (256)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHH
Confidence            4678999          999999999999999999999999998877665442 22    221   1 22333322 222


Q ss_pred             HHHHHh-CCCcccEEEeCCC
Q 019790          209 RVKEET-GGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~-~~~~~d~vid~~g  227 (335)
                      .+.+.. ...++|+++.+++
T Consensus        73 ~~~~~~~~~~~id~vi~~A~   92 (256)
T PRK09186         73 FLSKSAEKYGKIDGAVNCAY   92 (256)
T ss_pred             HHHHHHHHcCCccEEEECCc
Confidence            222211 1135899999885

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.79  E-value=0.21  Score=43.52  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=51.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCccHH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----  207 (335)
                      .+.++||          +|++|.+|..+++.+...|++|++++++++..+.+.    ..+... .+  |..+....    
T Consensus         3 ~~~~vlI----------tG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   72 (258)
T PRK12429          3 KGKVALV----------TGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGI   72 (258)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            3568999          999999999999999889999999999877655442    223221 12  33332211    


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|.+++
T Consensus        73 ~~~~~~~--~~~d~vi~~a~   90 (258)
T PRK12429         73 DYAVETF--GGVDILVNNAG   90 (258)
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence            1222222  36899999886

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.22  Score=43.53  Aligned_cols=79  Identities=27%  Similarity=0.312  Sum_probs=50.3

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCC-C-EE--EeCCCcc-HHHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA-D-VC--INYKTED-FVARVKEE  213 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~-~-~~--~~~~~~~-~~~~~~~~  213 (335)
                      +.++||          +|++|.+|...+..+...|++|++++++.++.+.+.+ +.. . ..  .|-.+.. +...+.+.
T Consensus         2 ~k~ilI----------tGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   71 (257)
T PRK07074          2 KRTALV----------TGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANA   71 (257)
T ss_pred             CCEEEE----------ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            357899          9999999999999888889999999998776655432 221 1 11  2322222 11222221


Q ss_pred             h-CCCcccEEEeCCCh
Q 019790          214 T-GGKGVDVILDCMGA  228 (335)
Q Consensus       214 ~-~~~~~d~vid~~g~  228 (335)
                      . ...++|+++.+.|.
T Consensus        72 ~~~~~~~d~vi~~ag~   87 (257)
T PRK07074         72 AAERGPVDVLVANAGA   87 (257)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1 11258999998873

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.77  E-value=0.16  Score=44.58  Aligned_cols=73  Identities=25%  Similarity=0.294  Sum_probs=46.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCcc-HHHHHHHHh-CCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTED-FVARVKEET-GGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~-~~~~~~~~~-~~~~~d~vid~~g  227 (335)
                      +|+++++|.++++.+...|++|+++.+++++.+.+.    +.+....+  |-.+.. ..+.+.+.. ...++|++|.++|
T Consensus         6 tGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG   85 (259)
T PRK08340          6 TASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAG   85 (259)
T ss_pred             EcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            999999999999999989999999999877654442    22322222  322222 222222211 1136899999887


Q ss_pred             h
Q 019790          228 A  228 (335)
Q Consensus       228 ~  228 (335)
                      .
T Consensus        86 ~   86 (259)
T PRK08340         86 N   86 (259)
T ss_pred             C
Confidence            3

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.76  E-value=0.21  Score=43.50  Aligned_cols=76  Identities=22%  Similarity=0.361  Sum_probs=50.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEE--eCCCcc-HH---H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTED-FV---A  208 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~---~  208 (335)
                      +.++||          .|+++.+|.++++.+...|++|+.+.++.++.+.+.+    .+.. ..+  |..+.. ..   +
T Consensus         8 ~k~vlI----------tGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (252)
T PRK07035          8 GKIALV----------TGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFA   77 (252)
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            467999          9999999999999999999999999998776544432    2322 122  322222 11   1


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|+++.+.|
T Consensus        78 ~~~~~~--~~id~li~~ag   94 (252)
T PRK07035         78 HIRERH--GRLDILVNNAA   94 (252)
T ss_pred             HHHHHc--CCCCEEEECCC
Confidence            222222  25899998887

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.76  E-value=0.25  Score=44.71  Aligned_cols=84  Identities=19%  Similarity=0.224  Sum_probs=57.0

Q ss_pred             ccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH--
Q 019790          156 HGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF--  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~--  231 (335)
                      +| .|.+|.+.+..++..|.  +|++.++++++.+.+++.|......   .+..    +..  ...|+||.|+.....  
T Consensus        12 IG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~----~~~--~~aDvViiavp~~~~~~   81 (307)
T PRK07502         12 IG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAA----EAV--KGADLVILCVPVGASGA   81 (307)
T ss_pred             Ee-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHH----HHh--cCCCEEEECCCHHHHHH
Confidence            77 89999999999988885  8999999998888887777532111   1111    111  258999999987543  


Q ss_pred             --HHhhccccCCCEEEEEec
Q 019790          232 --QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       232 --~~~~~~l~~~G~~v~~g~  249 (335)
                        ......++++..++.+|.
T Consensus        82 v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCcc
Confidence              333345666666666654

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.74  E-value=0.12  Score=45.70  Aligned_cols=101  Identities=19%  Similarity=0.228  Sum_probs=64.7

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC--CE-EEeCCCccHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DV-CINYKTEDFVA  208 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~--~~-~~~~~~~~~~~  208 (335)
                      ....++.++.+||-          .|  ++.|..+..+++..+++|++++.++...+.+++...  +. .+..  .++. 
T Consensus        45 l~~l~l~~~~~VLD----------iG--cG~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~-  109 (263)
T PTZ00098         45 LSDIELNENSKVLD----------IG--SGLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL-  109 (263)
T ss_pred             HHhCCCCCCCEEEE----------Ec--CCCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc-
Confidence            35567889999888          76  335666777777778999999999988887775321  11 1111  1110 


Q ss_pred             HHHHHhCCCcccEEEeC-----CC--h--hhHHHhhccccCCCEEEEEec
Q 019790          209 RVKEETGGKGVDVILDC-----MG--A--SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~-----~g--~--~~~~~~~~~l~~~G~~v~~g~  249 (335)
                        ........||+|+..     .+  .  ..+..+.+.|+|+|+++....
T Consensus       110 --~~~~~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        110 --KKDFPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             --cCCCCCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence              001123469999862     12  1  235678899999999987654

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.69  E-value=0.39  Score=42.13  Aligned_cols=95  Identities=14%  Similarity=0.161  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      ......++.+||-          .|  ++.|..+..+++.. +.+|++++.++...+.+++.+..... .+   .    .
T Consensus        23 ~~l~~~~~~~vLD----------lG--cG~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~d---~----~   82 (255)
T PRK14103         23 ARVGAERARRVVD----------LG--CGPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-GD---V----R   82 (255)
T ss_pred             HhCCCCCCCEEEE----------Ec--CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-cC---h----h
Confidence            4445667788877          76  34477777887775 67999999999988888776544322 11   1    1


Q ss_pred             HHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEE
Q 019790          212 EETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~  247 (335)
                      +......||+|+-...     .  ..+..+.+.|+++|+++..
T Consensus        83 ~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         83 DWKPKPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             hCCCCCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            2222347999987443     1  2356788999999999764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=94.67  E-value=0.17  Score=47.01  Aligned_cols=87  Identities=14%  Similarity=0.112  Sum_probs=58.0

Q ss_pred             ccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcC---C-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          156 HGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---A-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g---~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                      +| +|.+|..+++.+-+.| .+|++.+|+.++.+.+.+..   . ...+|-.+.   +.+.+...  ++|+||+|.+...
T Consensus         7 iG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~---~al~~li~--~~d~VIn~~p~~~   80 (389)
T COG1748           7 IG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV---DALVALIK--DFDLVINAAPPFV   80 (389)
T ss_pred             EC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh---HHHHHHHh--cCCEEEEeCCchh
Confidence            77 5999999999977777 79999999999888886553   2 123343332   34445544  4699999999866


Q ss_pred             HHHhh-ccccCCCEEEEEe
Q 019790          231 FQRNL-GSLNIDGRLFIIG  248 (335)
Q Consensus       231 ~~~~~-~~l~~~G~~v~~g  248 (335)
                      ...++ .+++.+=.++...
T Consensus        81 ~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          81 DLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             hHHHHHHHHHhCCCEEEcc
Confidence            44444 3334343444443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.66  E-value=0.25  Score=46.52  Aligned_cols=76  Identities=18%  Similarity=0.274  Sum_probs=50.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEEeCCCccHHHHHHHHhCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~  216 (335)
                      .+.+++|          .||+|.+|.+++..+...|++|+++++++++.+... ..... ..+..+-.+ .+.+.+..+ 
T Consensus       177 ~gK~VLI----------TGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~-  244 (406)
T PRK07424        177 KGKTVAV----------TGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLE-  244 (406)
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhC-
Confidence            4678999          999999999999998889999999998876554322 11111 122111112 223444433 


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                       ++|++|.++|
T Consensus       245 -~IDiLInnAG  254 (406)
T PRK07424        245 -KVDILIINHG  254 (406)
T ss_pred             -CCCEEEECCC
Confidence             6999999876

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.64  E-value=0.23  Score=43.95  Aligned_cols=79  Identities=20%  Similarity=0.289  Sum_probs=51.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC-EEE--eCCCc-cHHHHHHHHh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTE-DFVARVKEET  214 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~-~~~~~~~~~~  214 (335)
                      +.++||          +|++|.+|..+++.+...|++|++++++.+..+.+.+ .+.. ..+  |..+. .+...+....
T Consensus         3 ~k~vlI----------tGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (275)
T PRK08263          3 EKVWFI----------TGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAV   72 (275)
T ss_pred             CCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHH
Confidence            357899          9999999999999888889999999998877665543 2221 122  22221 1211122111


Q ss_pred             -CCCcccEEEeCCCh
Q 019790          215 -GGKGVDVILDCMGA  228 (335)
Q Consensus       215 -~~~~~d~vid~~g~  228 (335)
                       .-.++|.+|.|+|.
T Consensus        73 ~~~~~~d~vi~~ag~   87 (275)
T PRK08263         73 EHFGRLDIVVNNAGY   87 (275)
T ss_pred             HHcCCCCEEEECCCC
Confidence             11368999999873

>PLN02253 xanthoxin dehydrogenase

Probab=94.64  E-value=0.2  Score=44.41  Aligned_cols=78  Identities=21%  Similarity=0.334  Sum_probs=50.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--C-EE--EeCCCcc-HH---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VC--INYKTED-FV---A  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~-~~--~~~~~~~-~~---~  208 (335)
                      .+.++||          .|+++.+|.++++.+...|++|++++++++..+.+. +++.  . ..  .|-.+.+ +.   +
T Consensus        17 ~~k~~lI----------tGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   86 (280)
T PLN02253         17 LGKVALV----------TGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVD   86 (280)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHH
Confidence            3678999          999999999999988888999999998766544433 2321  1 11  2333322 11   2


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+..  .++|+++.++|.
T Consensus        87 ~~~~~~--g~id~li~~Ag~  104 (280)
T PLN02253         87 FTVDKF--GTLDIMVNNAGL  104 (280)
T ss_pred             HHHHHh--CCCCEEEECCCc
Confidence            222222  368999998863

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.63  E-value=0.61  Score=40.52  Aligned_cols=104  Identities=24%  Similarity=0.384  Sum_probs=62.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCc-cH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTE-DF---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~-~~---  206 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++.. +++++.+..    +..+... .+  |-.+. ..   
T Consensus         3 ~~k~~lI----------tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (252)
T PRK12747          3 KGKVALV----------TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEAL   72 (252)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHH
Confidence            3578999          99999999999999999999998875 444443322    2223221 11  22221 11   


Q ss_pred             HHHHHHH----hCCCcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          207 VARVKEE----TGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 ~~~~~~~----~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      .+.+.+.    .+..++|+++.++|..           .+               ..+++.++..|+++.++....
T Consensus        73 ~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         73 YSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             HHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            1222221    1223799999988721           01               124455666799998876654

>PLN00016 RNA-binding protein; Provisional

Probab=94.63  E-value=0.19  Score=46.84  Aligned_cols=96  Identities=19%  Similarity=0.209  Sum_probs=61.2

Q ss_pred             CCEEEEeeccccccccc----cccchHHHHHHHHHhhCCCeEEEEecChhhHHH-----------HHHcCCCEEEeCCCc
Q 019790          140 GESFLVDFCSISYSDVH----GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-----------CKDLGADVCINYKTE  204 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~----g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~  204 (335)
                      ..+|||          +    ||+|-+|..++..+...|.+|++++|+......           +...+...+. .   
T Consensus        52 ~~~VLV----------t~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~---  117 (378)
T PLN00016         52 KKKVLI----------VNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G---  117 (378)
T ss_pred             cceEEE----------EeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e---
Confidence            367999          9    999999999999999899999999987654221           1122333322 1   


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCC--CEEEEEecc
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASY--FQRNLGSLNID--GRLFIIGTQ  250 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~--G~~v~~g~~  250 (335)
                      +..+ +.+.....++|+|+++.+...  ....++.++..  .+++.++..
T Consensus       118 D~~d-~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        118 DPAD-VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             cHHH-HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            1211 333333457999999987532  34445555433  378776543

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.61  E-value=0.053  Score=46.00  Aligned_cols=101  Identities=17%  Similarity=0.201  Sum_probs=65.3

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFV  207 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~  207 (335)
                      ..+..+-.+||.          +|  +.+|..++.+|+.+  +.+|+.+..+++..+.+++    .|....+.....+..
T Consensus        40 l~~~~~~k~vLE----------IG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~  107 (205)
T PF01596_consen   40 LVRLTRPKRVLE----------IG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDAL  107 (205)
T ss_dssp             HHHHHT-SEEEE----------ES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HH
T ss_pred             HHHhcCCceEEE----------ec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccH
Confidence            334455568888          87  77899999999987  5799999999988777753    443221222223344


Q ss_pred             HHHHHHhC---CCcccEEEe-CCChh---hHHHhhccccCCCEEEE
Q 019790          208 ARVKEETG---GKGVDVILD-CMGAS---YFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       208 ~~~~~~~~---~~~~d~vid-~~g~~---~~~~~~~~l~~~G~~v~  246 (335)
                      +.+.+...   .+.||.||- +--..   .+..+++.|+++|-++.
T Consensus       108 ~~l~~l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~  153 (205)
T PF01596_consen  108 EVLPELANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIA  153 (205)
T ss_dssp             HHHHHHHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhHHHHHhccCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEE
Confidence            44444332   237999974 44332   35678899999998775

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=94.60  E-value=0.12  Score=42.62  Aligned_cols=100  Identities=21%  Similarity=0.258  Sum_probs=62.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHH----HcCCCEEEeCCCccHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFV  207 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~  207 (335)
                      ....+++|+.++=          .|  .+.|...+++++.. ..+|+++++++++.+..+    ++|.+.+..- ..+..
T Consensus        28 s~L~~~~g~~l~D----------IG--aGtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv-~g~Ap   94 (187)
T COG2242          28 SKLRPRPGDRLWD----------IG--AGTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVV-EGDAP   94 (187)
T ss_pred             HhhCCCCCCEEEE----------eC--CCccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEE-eccch
Confidence            3456788885544          55  23455566666433 469999999998877664    5776543211 12222


Q ss_pred             HHHHHHhCCCcccEEEeCCCh---hhHHHhhccccCCCEEEEEe
Q 019790          208 ARVKEETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +.+.+.   ..+|.+|---|.   ..++.++..|+++||++.-.
T Consensus        95 ~~L~~~---~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na  135 (187)
T COG2242          95 EALPDL---PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA  135 (187)
T ss_pred             HhhcCC---CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence            333222   258999875553   23678899999999998754

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.60  E-value=0.27  Score=43.96  Aligned_cols=37  Identities=27%  Similarity=0.335  Sum_probs=32.2

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ..+.++||          +|+++++|.++++.+...|++|+++.++.
T Consensus         4 l~~k~~lI----------TGas~GIG~aia~~la~~G~~vii~~~~~   40 (286)
T PRK07791          4 LDGRVVIV----------TGAGGGIGRAHALAFAAEGARVVVNDIGV   40 (286)
T ss_pred             cCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence            35678999          99999999999998888999999987654

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.60  E-value=0.26  Score=43.94  Aligned_cols=83  Identities=31%  Similarity=0.382  Sum_probs=55.8

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE--------EeCCCccHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC--------INYKTEDFV  207 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~--------~~~~~~~~~  207 (335)
                      .++...++|          .||+.++|++.+.-++..|++|+++.|+.+++..+.. ++....        .|..+-+-.
T Consensus        30 ~k~~~hi~i----------tggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v   99 (331)
T KOG1210|consen   30 PKPRRHILI----------TGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSV   99 (331)
T ss_pred             cCccceEEE----------ecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHH
Confidence            345578999          9999999999999999999999999999999887753 331111        111111112


Q ss_pred             HHHHHHhC--CCcccEEEeCCChh
Q 019790          208 ARVKEETG--GKGVDVILDCMGAS  229 (335)
Q Consensus       208 ~~~~~~~~--~~~~d~vid~~g~~  229 (335)
                      +.+.+.+.  ..++|.+|.|+|..
T Consensus       100 ~~~~~~l~~~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  100 SKVIEELRDLEGPIDNLFCCAGVA  123 (331)
T ss_pred             HHHHhhhhhccCCcceEEEecCcc
Confidence            22222221  13789999999853

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.59  E-value=0.24  Score=42.86  Aligned_cols=79  Identities=22%  Similarity=0.271  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~  210 (335)
                      ++.++||          +|++|.+|..++..+...|++|++++++.+..+.+.    ..+... .+  |..+.. ..+.+
T Consensus         2 ~~~~ilI----------tGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~   71 (250)
T TIGR03206         2 KDKTAIV----------TGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAV   71 (250)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            3678999          999999999999999999999999998877655443    222222 22  222222 22222


Q ss_pred             HHHhC-CCcccEEEeCCC
Q 019790          211 KEETG-GKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~-~~~~d~vid~~g  227 (335)
                      .+... ..++|++|.+.|
T Consensus        72 ~~~~~~~~~~d~vi~~ag   89 (250)
T TIGR03206        72 AAAEQALGPVDVLVNNAG   89 (250)
T ss_pred             HHHHHHcCCCCEEEECCC
Confidence            22211 136899999887

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06398 aldose dehydrogenase; Validated

Probab=94.54  E-value=0.03  Score=49.24  Aligned_cols=74  Identities=19%  Similarity=0.287  Sum_probs=48.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCcc-HHHHHHHHh-C
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTED-FVARVKEET-G  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~-~  215 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++.+++....     ... ...|-.+.. +.+.+.+.. .
T Consensus         5 ~gk~vlI----------tGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          5 KDKVAIV----------TGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3678999          999999999999999999999999998764422     111 112333322 222222211 1


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                      ..++|++|.++|
T Consensus        70 ~~~id~li~~Ag   81 (258)
T PRK06398         70 YGRIDILVNNAG   81 (258)
T ss_pred             cCCCCEEEECCC
Confidence            135899999887

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.53  E-value=0.19  Score=43.91  Aligned_cols=80  Identities=20%  Similarity=0.328  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~  210 (335)
                      ++.+++|          .|+++.+|..++..+...|++|+++.+++++.+.+.    +.+... .  .|..+.. +...+
T Consensus        10 ~~k~ilI----------tGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124         10 AGQVALV----------TGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            4778999          999999999999988888999999999876654432    233221 2  2333322 22222


Q ss_pred             HHHhC-CCcccEEEeCCCh
Q 019790          211 KEETG-GKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~-~~~~d~vid~~g~  228 (335)
                      .+... ..++|.+|.++|.
T Consensus        80 ~~~~~~~~~id~vi~~ag~   98 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGA   98 (256)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence            22111 1368999998874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.52  E-value=0.27  Score=42.44  Aligned_cols=78  Identities=31%  Similarity=0.463  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EE--eCCCcc-HHH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED-FVA---RV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~-~~~---~~  210 (335)
                      ++.++||          .|++|.+|..++..+...|++|+...++.++.+.+. ..+... .+  |-.+.. +.+   .+
T Consensus         5 ~~~~vlI----------tGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          5 SGRKALV----------TGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            3568999          999999999999999889999988888776665543 333222 22  222221 111   22


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|.+|.++|.
T Consensus        75 ~~~~--~~id~vi~~ag~   90 (245)
T PRK12936         75 EADL--EGVDILVNNAGI   90 (245)
T ss_pred             HHHc--CCCCEEEECCCC
Confidence            2222  368999999873

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.47  E-value=0.25  Score=43.18  Aligned_cols=41  Identities=29%  Similarity=0.312  Sum_probs=34.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      +.++||          .|+++.+|..++..+...|++|+.++++....+.+
T Consensus         2 ~k~ilI----------tG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~   42 (259)
T PRK12384          2 NQVAVV----------IGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANV   42 (259)
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            357899          99999999999999988999999999887655443

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.46  E-value=0.46  Score=42.45  Aligned_cols=78  Identities=17%  Similarity=0.157  Sum_probs=54.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -.|.+++|          .|..+.+|..++.++...|++|++..+...                       .+.+.+  +
T Consensus       157 l~Gk~vvV----------iG~gg~vGkpia~~L~~~gatVtv~~~~t~-----------------------~L~~~~--~  201 (283)
T PRK14192        157 LAGKHAVV----------VGRSAILGKPMAMMLLNANATVTICHSRTQ-----------------------NLPELV--K  201 (283)
T ss_pred             CCCCEEEE----------ECCcHHHHHHHHHHHHhCCCEEEEEeCCch-----------------------hHHHHh--c
Confidence            56788999          886556999999999999998887764211                       122222  3


Q ss_pred             cccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      .+|++++|+|...+ --.+.++++-.++.+|...
T Consensus       202 ~aDIvI~AtG~~~~-v~~~~lk~gavViDvg~n~  234 (283)
T PRK14192        202 QADIIVGAVGKPEL-IKKDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             cCCEEEEccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence            68999999986542 1235578888888887544

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=94.45  E-value=0.27  Score=42.96  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=51.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVAR-  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~-  209 (335)
                      .+.++||          .|+++.+|..++..+...|++|++++++.+..+.+.    ..+.+. .  .|..+.+ ..+. 
T Consensus        10 ~~k~vlV----------tG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   79 (255)
T PRK06113         10 DGKCAII----------TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4678999          999999999999999899999999998877654442    223222 2  2333322 1121 


Q ss_pred             --HHHHhCCCcccEEEeCCC
Q 019790          210 --VKEETGGKGVDVILDCMG  227 (335)
Q Consensus       210 --~~~~~~~~~~d~vid~~g  227 (335)
                        +.+..  .++|+++.++|
T Consensus        80 ~~~~~~~--~~~d~li~~ag   97 (255)
T PRK06113         80 DFALSKL--GKVDILVNNAG   97 (255)
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence              22222  36899999887

>PRK07985 oxidoreductase; Provisional

Probab=94.45  E-value=0.53  Score=42.24  Aligned_cols=35  Identities=31%  Similarity=0.339  Sum_probs=30.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.++
T Consensus        48 ~~k~vlI----------TGas~gIG~aia~~L~~~G~~Vi~~~~~   82 (294)
T PRK07985         48 KDRKALV----------TGGDSGIGRAAAIAYAREGADVAISYLP   82 (294)
T ss_pred             CCCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence            4568999          9999999999999999999999987654

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.42  E-value=0.22  Score=44.12  Aligned_cols=37  Identities=24%  Similarity=0.482  Sum_probs=32.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  185 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~  185 (335)
                      .+.++||          +|+++.+|..++..+...|++|+++.++.+
T Consensus         5 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFI----------TGASRGIGLAIALRAARDGANIVIAAKTAE   41 (273)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence            4568999          999999999999998889999999998653

>PRK12743 oxidoreductase; Provisional

Probab=94.40  E-value=0.26  Score=43.04  Aligned_cols=76  Identities=18%  Similarity=0.246  Sum_probs=48.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHH----HHHcCCCE-E--EeCCCcc-H---H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAV----CKDLGADV-C--INYKTED-F---V  207 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~----~~~~g~~~-~--~~~~~~~-~---~  207 (335)
                      +.++||          .|+++.+|..+++.+...|++|+++.+ +.++.+.    ++..+... .  .|..+.. .   .
T Consensus         2 ~k~vlI----------tGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   71 (256)
T PRK12743          2 AQVAIV----------TASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQAL   71 (256)
T ss_pred             CCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            357899          999999999999999999999988864 3333322    22344322 2  2333322 1   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|.+.|
T Consensus        72 ~~~~~~~--~~id~li~~ag   89 (256)
T PRK12743         72 DKLIQRL--GRIDVLVNNAG   89 (256)
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence            2233322  36899999887

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=94.37  E-value=0.2  Score=44.91  Aligned_cols=145  Identities=21%  Similarity=0.276  Sum_probs=79.1

Q ss_pred             CCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHH--HHHHHhcCCCCCCEEEEeeccccccccc
Q 019790           79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVDFCSISYSDVH  156 (335)
Q Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~--~~l~~~~~~~~~~~vli~~~~~~~~~~~  156 (335)
                      +++|++.+...   .|.++-.-+...++.+.+++.+-.+.    ...|..  .+|.+.  ..+|++||=          .
T Consensus       108 ~~vg~~~~I~P---~w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLD----------v  168 (295)
T PF06325_consen  108 IRVGDRLVIVP---SWEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLD----------V  168 (295)
T ss_dssp             EEECTTEEEEE---TT----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEE----------E
T ss_pred             EEECCcEEEEC---CCcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEE----------e
Confidence            56677655552   34444222344566676665544442    222222  223222  467788877          6


Q ss_pred             cccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          157 GGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       157 g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                      |  ++.|.+++..++. |+ +|++++.++...+.+++    .+. +.+......+..        ..+||+|+-++-...
T Consensus       169 G--~GSGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~--------~~~~dlvvANI~~~v  237 (295)
T PF06325_consen  169 G--CGSGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV--------EGKFDLVVANILADV  237 (295)
T ss_dssp             S---TTSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC--------CS-EEEEEEES-HHH
T ss_pred             C--CcHHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc--------cccCCEEEECCCHHH
Confidence            6  4456666655554 87 79999988776665543    221 122111111111        157999999988765


Q ss_pred             H----HHhhccccCCCEEEEEeccCCC
Q 019790          231 F----QRNLGSLNIDGRLFIIGTQGGA  253 (335)
Q Consensus       231 ~----~~~~~~l~~~G~~v~~g~~~~~  253 (335)
                      +    ....+.|+++|.+++-|.....
T Consensus       238 L~~l~~~~~~~l~~~G~lIlSGIl~~~  264 (295)
T PF06325_consen  238 LLELAPDIASLLKPGGYLILSGILEEQ  264 (295)
T ss_dssp             HHHHHHHCHHHEEEEEEEEEEEEEGGG
T ss_pred             HHHHHHHHHHhhCCCCEEEEccccHHH
Confidence            4    3456778999999998876643

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK14967 putative methyltransferase; Provisional

Probab=94.35  E-value=1  Score=38.57  Aligned_cols=95  Identities=19%  Similarity=0.253  Sum_probs=60.4

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCCCEEEeCCCccHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVA  208 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~  208 (335)
                      ...+.+++++|-          .| +|. |..+..+++. ++ +|++++.+++..+.+++    .+....+..  .++.+
T Consensus        31 ~~~~~~~~~vLD----------lG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d~~~   95 (223)
T PRK14967         31 AEGLGPGRRVLD----------LC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GDWAR   95 (223)
T ss_pred             hcccCCCCeEEE----------ec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cchhh
Confidence            345678888888          76 454 8888888875 65 99999999887776543    333222211  22222


Q ss_pred             HHHHHhCCCcccEEEeCCCh----------------------------hhHHHhhccccCCCEEEEE
Q 019790          209 RVKEETGGKGVDVILDCMGA----------------------------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~----------------------------~~~~~~~~~l~~~G~~v~~  247 (335)
                          ......||+|+.+.+-                            ..+..+.+.|+++|+++.+
T Consensus        96 ----~~~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         96 ----AVEFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             ----hccCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence                1223479999975210                            0134577899999999876

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.35  E-value=0.34  Score=41.94  Aligned_cols=78  Identities=22%  Similarity=0.290  Sum_probs=50.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c--CCCE-E--EeCCCcc-HHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GADV-C--INYKTED-FVAR  209 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~--g~~~-~--~~~~~~~-~~~~  209 (335)
                      +.++||          +|+++.+|..+++.+...|++|+++++++++.+.+..    .  +... .  .|..+.. +.+.
T Consensus         2 ~k~vlI----------tGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   71 (248)
T PRK08251          2 RQKILI----------TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEV   71 (248)
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHH
Confidence            457899          9999999999998888889999999998877655432    1  2111 1  2333322 2222


Q ss_pred             HHHHh-CCCcccEEEeCCC
Q 019790          210 VKEET-GGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~-~~~~~d~vid~~g  227 (335)
                      +.+.. ...++|++|.++|
T Consensus        72 ~~~~~~~~~~id~vi~~ag   90 (248)
T PRK08251         72 FAEFRDELGGLDRVIVNAG   90 (248)
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            22211 1136899999886

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.34  E-value=0.41  Score=42.49  Aligned_cols=91  Identities=14%  Similarity=0.099  Sum_probs=57.4

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc---CCCEEEeCCCccHHHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCINYKTEDFVARVKE  212 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~  212 (335)
                      ...+.+++|          .| +|++|.+++..+...|++|++..|+.++.+.+. .+   +.......     .+    
T Consensus       114 ~~~~k~vli----------iG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~----  173 (270)
T TIGR00507       114 LRPNQRVLI----------IG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DE----  173 (270)
T ss_pred             CccCCEEEE----------Ec-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hh----
Confidence            345678899          88 589999999888888999999999987765543 22   21111111     11    


Q ss_pred             HhCCCcccEEEeCCChhhHH------HhhccccCCCEEEEEe
Q 019790          213 ETGGKGVDVILDCMGASYFQ------RNLGSLNIDGRLFIIG  248 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~~~~~------~~~~~l~~~G~~v~~g  248 (335)
                      . ....+|+||+|++.....      .....++++..++.+.
T Consensus       174 ~-~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~  214 (270)
T TIGR00507       174 L-PLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMV  214 (270)
T ss_pred             h-cccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence            1 113589999999864211      0123456666666663

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.32  E-value=0.44  Score=40.69  Aligned_cols=100  Identities=20%  Similarity=0.148  Sum_probs=60.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---------eCCCcc-H
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---------NYKTED-F  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---------~~~~~~-~  206 (335)
                      .++.++|+          .|  .+.|.-++.+|. +|.+|++++.++...+.+. +.+.....         ...... .
T Consensus        33 ~~~~rvLd----------~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   99 (213)
T TIGR03840        33 PAGARVFV----------PL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIF   99 (213)
T ss_pred             CCCCeEEE----------eC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEE
Confidence            56778999          65  667888888886 5999999999999888753 23221000         000000 0


Q ss_pred             HHHHHHHh--CCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEecc
Q 019790          207 VARVKEET--GGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       207 ~~~~~~~~--~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ...+.+..  ....||.++|+..-         ..+..+.+.|+|+|+++..+..
T Consensus       100 ~~D~~~~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~  154 (213)
T TIGR03840       100 CGDFFALTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD  154 (213)
T ss_pred             EccCCCCCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence            00111111  01369999996541         2356788999999997666543

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.31  E-value=0.18  Score=43.21  Aligned_cols=74  Identities=22%  Similarity=0.233  Sum_probs=49.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCcc-HHHHHHHHhCCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTED-FVARVKEETGGK  217 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~~~~  217 (335)
                      +.++||          .|++|.+|..+++.+...|++|+++.++.+.     ..... ...|..+.. +.+.+.+.....
T Consensus         3 ~k~vlI----------tG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   67 (234)
T PRK07577          3 SRTVLV----------TGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIH   67 (234)
T ss_pred             CCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            567899          9999999999999999999999999987654     11111 123433322 222333333333


Q ss_pred             cccEEEeCCCh
Q 019790          218 GVDVILDCMGA  228 (335)
Q Consensus       218 ~~d~vid~~g~  228 (335)
                      ++|++|.++|.
T Consensus        68 ~~d~vi~~ag~   78 (234)
T PRK07577         68 PVDAIVNNVGI   78 (234)
T ss_pred             CCcEEEECCCC
Confidence            68999998874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.31  E-value=0.33  Score=42.40  Aligned_cols=77  Identities=13%  Similarity=0.189  Sum_probs=50.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc--CCCEE-EeCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL--GADVC-INYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~  215 (335)
                      .+.++||          +|++|.+|..++..+...|++|+++.|+.++.......  +...+ .|..+.  ...+.+...
T Consensus        16 ~~~~ilI----------tGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~l~~~~~   83 (251)
T PLN00141         16 KTKTVFV----------AGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--SDKLVEAIG   83 (251)
T ss_pred             cCCeEEE----------ECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--HHHHHHHhh
Confidence            3578999          99999999999998888899999999887765433221  12211 233321  123333331


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                       .++|++|.+.|.
T Consensus        84 -~~~d~vi~~~g~   95 (251)
T PLN00141         84 -DDSDAVICATGF   95 (251)
T ss_pred             -cCCCEEEECCCC
Confidence             268999988764

>PLN03075 nicotianamine synthase; Provisional

Probab=94.28  E-value=0.25  Score=44.16  Aligned_cols=96  Identities=13%  Similarity=0.054  Sum_probs=62.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcC-C----CEEEeCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLG-A----DVCINYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g-~----~~~~~~~~~~~~~~~~  211 (335)
                      +.++|+-          .| +|+.++.++.++..+  +.+++.++.+++..+.+++.- .    ..-+.....+..+.  
T Consensus       123 ~p~~Vld----------IG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~--  189 (296)
T PLN03075        123 VPTKVAF----------VG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDV--  189 (296)
T ss_pred             CCCEEEE----------EC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhc--
Confidence            6677877          77 899999888888665  458999999999888776532 1    11111111222111  


Q ss_pred             HHhCCCcccEEEeCC------Ch--hhHHHhhccccCCCEEEEEe
Q 019790          212 EETGGKGVDVILDCM------GA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       212 ~~~~~~~~d~vid~~------g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                       ....++||+||-.+      ..  ..+....+.|++||.++.-.
T Consensus       190 -~~~l~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        190 -TESLKEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             -ccccCCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence             11124799999764      12  23678889999999887654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.26  E-value=0.37  Score=42.99  Aligned_cols=92  Identities=17%  Similarity=0.189  Sum_probs=57.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      ..+.+++|          +| +|.+|.+++..+...| .+|+++.|+.++.+.+.+ ++....+.. ..+.    .+.. 
T Consensus       121 ~~~k~vlV----------lG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~~~~-  183 (278)
T PRK00258        121 LKGKRILI----------LG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----QEEL-  183 (278)
T ss_pred             CCCCEEEE----------Ec-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----hhcc-
Confidence            34568888          88 6999999999999999 599999999888766643 332110111 0011    1111 


Q ss_pred             CCcccEEEeCCChhhH------HHhhccccCCCEEEEE
Q 019790          216 GKGVDVILDCMGASYF------QRNLGSLNIDGRLFII  247 (335)
Q Consensus       216 ~~~~d~vid~~g~~~~------~~~~~~l~~~G~~v~~  247 (335)
                       ..+|+||+|++....      ......++++..++.+
T Consensus       184 -~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~Di  220 (278)
T PRK00258        184 -ADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDM  220 (278)
T ss_pred             -ccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence             368999999875431      1123455665555555

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.25  E-value=0.3  Score=35.58  Aligned_cols=81  Identities=17%  Similarity=0.181  Sum_probs=53.5

Q ss_pred             ccccchHHHHHHHHHhhCC---CeEEEE-ecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          156 HGGSSGIGTFAIQMGKCQG---VRVFVT-AGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g---~~V~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                      +| .|.+|.+.+.-+...|   .+|+.. .+++++.+.+. +++..... .   +..+.+.      ..|+||-|+....
T Consensus         5 IG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~---~~~~~~~------~advvilav~p~~   73 (96)
T PF03807_consen    5 IG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-D---DNEEAAQ------EADVVILAVKPQQ   73 (96)
T ss_dssp             ES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-E---EHHHHHH------HTSEEEE-S-GGG
T ss_pred             EC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-C---ChHHhhc------cCCEEEEEECHHH
Confidence            65 8999999999999999   789955 89999888875 45543322 1   1222222      3799999999877


Q ss_pred             HHHhhccc---cCCCEEEEE
Q 019790          231 FQRNLGSL---NIDGRLFII  247 (335)
Q Consensus       231 ~~~~~~~l---~~~G~~v~~  247 (335)
                      +...+..+   .++.-++++
T Consensus        74 ~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   74 LPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHHhhccCCCEEEEe
Confidence            65554443   445555554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.24  E-value=0.32  Score=42.70  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=48.8

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhhH---HHH-HHcCCCEEE--eCCCc-cH---
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVC-KDLGADVCI--NYKTE-DF---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~---~~~-~~~g~~~~~--~~~~~-~~---  206 (335)
                      .+..+||          +|++  +++|.++++.+...|++|+++.++++..   +.+ ++++....+  |-.+. +.   
T Consensus         9 ~~k~~lI----------tGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   78 (258)
T PRK07533          9 AGKRGLV----------VGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAV   78 (258)
T ss_pred             CCCEEEE----------ECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHH
Confidence            4678999          9987  4899999999988999999998875432   222 233332223  22222 12   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  +++|++++|+|
T Consensus        79 ~~~~~~~~--g~ld~lv~nAg   97 (258)
T PRK07533         79 FARIAEEW--GRLDFLLHSIA   97 (258)
T ss_pred             HHHHHHHc--CCCCEEEEcCc
Confidence            22222222  36899999886

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.24  E-value=0.24  Score=44.07  Aligned_cols=43  Identities=21%  Similarity=0.275  Sum_probs=37.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD  192 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~  192 (335)
                      ++.+++|          .| +|+.+.+++..+...|+ +++++.|+.++.+.+.+
T Consensus       125 ~~~~vli----------lG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         125 TGKRVLI----------LG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             CCCEEEE----------EC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            5788999          88 79999999999999996 89999999998877764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.22  E-value=0.23  Score=45.07  Aligned_cols=103  Identities=21%  Similarity=0.307  Sum_probs=66.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCCEE----EeCCC----c
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC----INYKT----E  204 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~~~----~~~~~----~  204 (335)
                      ..+..++|          +|+++++|..++.-+-..|++|+.++|+.++.+.+.+ +    ....+    +|-.+    .
T Consensus        33 ~~~~~~vV----------TGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~  102 (314)
T KOG1208|consen   33 LSGKVALV----------TGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVR  102 (314)
T ss_pred             CCCcEEEE----------ECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHH
Confidence            34568899          9999999999999999999999999999876655542 2    22222    22222    1


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-----------------------h-HHHhhccccCC--CEEEEEeccCC
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-----------------------Y-FQRNLGSLNID--GRLFIIGTQGG  252 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-----------------------~-~~~~~~~l~~~--G~~v~~g~~~~  252 (335)
                      .+.+.+++  ...+.|+.++++|--                       . ....++.|+..  +|+|.+.+...
T Consensus       103 ~fa~~~~~--~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~  174 (314)
T KOG1208|consen  103 KFAEEFKK--KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG  174 (314)
T ss_pred             HHHHHHHh--cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence            12333332  234789999988720                       0 13345555544  89998876443

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.21  E-value=0.21  Score=46.84  Aligned_cols=80  Identities=24%  Similarity=0.367  Sum_probs=51.5

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH-------HHHHc-CCCEE-EeCCCccH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-------VCKDL-GADVC-INYKTEDF  206 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~-------~~~~~-g~~~~-~~~~~~~~  206 (335)
                      +-..+.++||          .||+|.+|..++..+...|.+|++++|+.....       ..... +...+ .|..+.+ 
T Consensus        56 ~~~~~~kVLV----------tGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-  124 (390)
T PLN02657         56 KEPKDVTVLV----------VGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-  124 (390)
T ss_pred             cCCCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-
Confidence            3356778999          999999999999999989999999998765321       11111 22222 2333332 


Q ss_pred             HHHHHHHhCC--CcccEEEeCCCh
Q 019790          207 VARVKEETGG--KGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~--~~~d~vid~~g~  228 (335)
                        .+.+...+  .++|+||.|++.
T Consensus       125 --~l~~~~~~~~~~~D~Vi~~aa~  146 (390)
T PLN02657        125 --SLRKVLFSEGDPVDVVVSCLAS  146 (390)
T ss_pred             --HHHHHHHHhCCCCcEEEECCcc
Confidence              22222211  169999998864

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.20  E-value=0.33  Score=42.66  Aligned_cols=78  Identities=21%  Similarity=0.274  Sum_probs=48.3

Q ss_pred             CCCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhH---HHHH-HcCCCEE--EeCCCcc-HH-
Q 019790          138 SPGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCK-DLGADVC--INYKTED-FV-  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~---~~~~-~~g~~~~--~~~~~~~-~~-  207 (335)
                      ..+..+||          +|+++  ++|.++++.+...|++|++..+++...   +.+. +.+....  .|-.+.. .. 
T Consensus         6 ~~~k~~lI----------TGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~   75 (260)
T PRK06603          6 LQGKKGLI----------TGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISN   75 (260)
T ss_pred             cCCcEEEE----------ECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHH
Confidence            35678899          99876  799999988888899999988774322   2222 2343222  2333322 22 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  +++|++++++|
T Consensus        76 ~~~~~~~~~--g~iDilVnnag   95 (260)
T PRK06603         76 LFDDIKEKW--GSFDFLLHGMA   95 (260)
T ss_pred             HHHHHHHHc--CCccEEEEccc
Confidence              2222222  36999999876

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.19  E-value=0.49  Score=44.72  Aligned_cols=74  Identities=9%  Similarity=0.152  Sum_probs=52.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      -.+.++||          .| +|.+|.+++..+...|+ +++++.|+.++.+.+. .++...+..     + +.+.+...
T Consensus       179 l~~kkvlv----------iG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-----~-~~l~~~l~  241 (414)
T PRK13940        179 ISSKNVLI----------IG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-----L-SELPQLIK  241 (414)
T ss_pred             ccCCEEEE----------Ec-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-----H-HHHHHHhc
Confidence            45678888          88 79999999999999997 7999999988766655 454222221     1 23333332


Q ss_pred             CCcccEEEeCCChhh
Q 019790          216 GKGVDVILDCMGASY  230 (335)
Q Consensus       216 ~~~~d~vid~~g~~~  230 (335)
                        .+|+||.|+++..
T Consensus       242 --~aDiVI~aT~a~~  254 (414)
T PRK13940        242 --KADIIIAAVNVLE  254 (414)
T ss_pred             --cCCEEEECcCCCC
Confidence              5899999999865

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.17  E-value=0.34  Score=43.78  Aligned_cols=80  Identities=18%  Similarity=0.253  Sum_probs=48.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhH----HHHHHcCCCEEE---eCCCccHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGADVCI---NYKTEDFVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~----~~~~~~g~~~~~---~~~~~~~~~~~  210 (335)
                      .+.++||          +|+++.+|...+..+...|++|++.+++. ...    +.++..+.....   |-.+.+-...+
T Consensus        11 ~~k~~lV----------TGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~   80 (306)
T PRK07792         11 SGKVAVV----------TGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADEL   80 (306)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence            4678999          99999999999999988999999987642 222    222333433222   22222111121


Q ss_pred             HH-HhCCCcccEEEeCCCh
Q 019790          211 KE-ETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~-~~~~~~~d~vid~~g~  228 (335)
                      .+ .....++|++|.++|.
T Consensus        81 ~~~~~~~g~iD~li~nAG~   99 (306)
T PRK07792         81 VATAVGLGGLDIVVNNAGI   99 (306)
T ss_pred             HHHHHHhCCCCEEEECCCC
Confidence            11 1112369999998873

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.17  E-value=0.29  Score=43.49  Aligned_cols=103  Identities=18%  Similarity=0.212  Sum_probs=63.6

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHH-HHcCCCEE--EeCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVC--INYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~-~~~g~~~~--~~~~~~~-~~~~  209 (335)
                      .+..+||          +|++  +++|.++++.+-..|++|+++.++++   +.+.+ .+++....  .|-.+.+ ..+.
T Consensus         4 ~~k~~lI----------tGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   73 (274)
T PRK08415          4 KGKKGLI----------VGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSL   73 (274)
T ss_pred             CCcEEEE----------ECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHH
Confidence            3678899          9986  79999999999889999999988753   23333 23443322  3333322 2222


Q ss_pred             HHHHhC-CCcccEEEeCCChh---------------hH---------------HHhhccccCCCEEEEEeccC
Q 019790          210 VKEETG-GKGVDVILDCMGAS---------------YF---------------QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       210 ~~~~~~-~~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +.+... ..++|++++++|..               .+               +..++.+..+|+++.++...
T Consensus        74 ~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~  146 (274)
T PRK08415         74 AESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG  146 (274)
T ss_pred             HHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence            222111 13689999998731               01               23455666789998886654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.17  E-value=0.24  Score=45.56  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=49.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHc--CCCE-EEeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL--GADV-CINYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~--g~~~-~~~~~~~~~~~~~~~~~  214 (335)
                      .+.++||          +||+|.+|..+++.+...|.+|+++.++....... ..+  +... .+..+-.+ .+.+.+..
T Consensus         3 ~~k~ilI----------tGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~   71 (349)
T TIGR02622         3 QGKKVLV----------TGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAI   71 (349)
T ss_pred             CCCEEEE----------ECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHH
Confidence            3578999          99999999999999999999999998765543222 111  1111 12111111 22344443


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                      ...++|+||.+++
T Consensus        72 ~~~~~d~vih~A~   84 (349)
T TIGR02622        72 AEFKPEIVFHLAA   84 (349)
T ss_pred             hhcCCCEEEECCc
Confidence            3336899999887

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=94.16  E-value=0.76  Score=41.45  Aligned_cols=58  Identities=26%  Similarity=0.398  Sum_probs=48.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEEe
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCIN  200 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~  200 (335)
                      ....+.||.+.||          -.-+|.+|...+.++..+|++++++..   +.++...++++|+..+..
T Consensus        96 ~~G~i~pg~stli----------EpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t  156 (362)
T KOG1252|consen   96 KKGLITPGKSTLI----------EPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILT  156 (362)
T ss_pred             HcCCccCCceEEE----------ecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence            4467899999999          677899999999999999999998874   667888888999877653

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.15  E-value=1.3  Score=39.46  Aligned_cols=147  Identities=18%  Similarity=0.156  Sum_probs=89.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-----------ccH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-----------EDF  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~  206 (335)
                      -+..++++          .| .|..|+.++..++.+|+-|........+.+..+++|+...-..+.           .+|
T Consensus       162 v~pA~vlv----------~G-~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~  230 (356)
T COG3288         162 VSPAKVLV----------IG-AGVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEF  230 (356)
T ss_pred             ccchhhhh----------hh-HHHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHH
Confidence            34456677          66 799999999999999999999887777777777777654321111           122


Q ss_pred             HH----HHHHHhCCCcccEEEeCC--Chh-----hHHHhhccccCCCEEEEEeccCCCccc--cChhHHhhcceEEEEee
Q 019790          207 VA----RVKEETGGKGVDVILDCM--GAS-----YFQRNLGSLNIDGRLFIIGTQGGAKTE--LNITSLFAKRLTVQAAG  273 (335)
Q Consensus       207 ~~----~~~~~~~~~~~d~vid~~--g~~-----~~~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~  273 (335)
                      ..    .+.+..  +++|+||-+.  .+.     ....+...|+|++.++.+....+.+-+  -+......++.++.|..
T Consensus       231 ~~~q~~~~a~~~--~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         231 IAKQAELVAEQA--KEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHHHHHHHHh--cCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            21    122222  4799999865  222     246789999999999988555443222  22233345577777643


Q ss_pred             -ccccchhhHHHHHHHHHHHHHHHH
Q 019790          274 -LRSRSTENKALIVSEVEKNVWPAI  297 (335)
Q Consensus       274 -~~~~~~~~~~~~~~~~~~~~~~~~  297 (335)
                       +..+...+...++...+-.+++++
T Consensus       309 nlp~r~a~~aS~LYa~Nl~~~l~ll  333 (356)
T COG3288         309 NLPGRLAAQASQLYATNLVNLLKLL  333 (356)
T ss_pred             CcchhhhhhHHHHHHHHHHHHHHHH
Confidence             333333333334444333344443

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.14  E-value=0.15  Score=44.73  Aligned_cols=74  Identities=18%  Similarity=0.187  Sum_probs=53.9

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  221 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (335)
                      +|||          .||+|- |..++..+...|.+|+++++++...+.+...+...+..... + .+.+.+.....++|+
T Consensus         2 ~ILv----------lGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l-~-~~~l~~~l~~~~i~~   68 (256)
T TIGR00715         2 TVLL----------MGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGAL-D-PQELREFLKRHSIDI   68 (256)
T ss_pred             eEEE----------EechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCC-C-HHHHHHHHHhcCCCE
Confidence            6888          998886 99888888888999999999988777777665544442221 1 233556666668999


Q ss_pred             EEeCCCh
Q 019790          222 ILDCMGA  228 (335)
Q Consensus       222 vid~~g~  228 (335)
                      |+|++-.
T Consensus        69 VIDAtHP   75 (256)
T TIGR00715        69 LVDATHP   75 (256)
T ss_pred             EEEcCCH
Confidence            9998864

This enzyme was found to be a monomer by gel filtration.

>PLN02244 tocopherol O-methyltransferase

Probab=94.13  E-value=0.091  Score=48.35  Aligned_cols=94  Identities=15%  Similarity=0.101  Sum_probs=61.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCccHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARV  210 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~  210 (335)
                      .++++||-          .|  ++.|..+..+++..|++|++++.++...+.+++    .+..   .....+....    
T Consensus       117 ~~~~~VLD----------iG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~----  180 (340)
T PLN02244        117 KRPKRIVD----------VG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ----  180 (340)
T ss_pred             CCCCeEEE----------ec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC----
Confidence            67788877          66  556778888888889999999999887776654    2321   1111111110    


Q ss_pred             HHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEec
Q 019790          211 KEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (335)
                        -...+.||+|+-.-..       ..+..+.+.|+++|+++....
T Consensus       181 --~~~~~~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        181 --PFEDGQFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             --CCCCCCccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence              0123479999864332       235678899999999987643

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.11  E-value=0.33  Score=43.01  Aligned_cols=79  Identities=18%  Similarity=0.174  Sum_probs=50.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--C-EEE--eCCCccHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCI--NYKTEDFVARV  210 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~-~~~--~~~~~~~~~~~  210 (335)
                      +.++||          +|++|.+|..++..+...|++|++++++.+..+...+    .+.  . ..+  |..+....+.+
T Consensus         3 ~k~~lI----------tGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~   72 (280)
T PRK06914          3 KKIAIV----------TGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNF   72 (280)
T ss_pred             CCEEEE----------ECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHH
Confidence            457899          9999999999999998899999999988776544432    221  1 122  33332211113


Q ss_pred             HHHh-CCCcccEEEeCCCh
Q 019790          211 KEET-GGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~-~~~~~d~vid~~g~  228 (335)
                      .+.. ...++|+++.|+|.
T Consensus        73 ~~~~~~~~~id~vv~~ag~   91 (280)
T PRK06914         73 QLVLKEIGRIDLLVNNAGY   91 (280)
T ss_pred             HHHHHhcCCeeEEEECCcc
Confidence            2221 11368999998863

>PRK08618 ornithine cyclodeaminase; Validated

Probab=94.07  E-value=0.89  Score=41.54  Aligned_cols=101  Identities=14%  Similarity=0.130  Sum_probs=66.2

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHH-hhCCC-eEEEEecChhhHHHHHH-----cCCCEEEeCCCccHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVCKD-----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a-~~~g~-~V~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~  210 (335)
                      ....+++|          .| +|..|...+..+ ...++ +|.+..+++++.+.+.+     ++.... ...  ++.+.+
T Consensus       125 ~~~~~v~i----------iG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~--~~~~~~  190 (325)
T PRK08618        125 EDAKTLCL----------IG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVN--SADEAI  190 (325)
T ss_pred             CCCcEEEE----------EC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC--CHHHHH
Confidence            34567888          77 899998776554 44576 78888999887765542     233221 121  122222


Q ss_pred             HHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccCh
Q 019790          211 KEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI  259 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  259 (335)
                            ...|+|+.|+++..-... .+++++-.+..+|.......+++.
T Consensus       191 ------~~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~  232 (325)
T PRK08618        191 ------EEADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS  232 (325)
T ss_pred             ------hcCCEEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence                  258999999998653334 888998898999887655555665

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.05  E-value=0.46  Score=42.28  Aligned_cols=96  Identities=17%  Similarity=0.175  Sum_probs=65.3

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +|+........|....---.|.+++|          .|.+..+|.-++.++...|++|++...                 
T Consensus       138 ~PcTp~aii~lL~~~~i~l~Gk~vvV----------iGrs~iVGkPla~lL~~~~atVt~~hs-----------------  190 (285)
T PRK14189        138 RPCTPYGVMKMLESIGIPLRGAHAVV----------IGRSNIVGKPMAMLLLQAGATVTICHS-----------------  190 (285)
T ss_pred             cCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEecC-----------------
Confidence            44444444444533322247889999          998888899999999999999987431                 


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                        .+.++.    +.+  +..|+++-++|...+-. -+.++++-.++.+|...
T Consensus       191 --~t~~l~----~~~--~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~  233 (285)
T PRK14189        191 --KTRDLA----AHT--RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR  233 (285)
T ss_pred             --CCCCHH----HHh--hhCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence              122222    222  24899999999876422 27889998889988643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.01  E-value=0.46  Score=41.77  Aligned_cols=78  Identities=17%  Similarity=0.282  Sum_probs=48.0

Q ss_pred             CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~-~---  206 (335)
                      .+..+||          +||  ++++|.++++.+...|++|+++.+++...+.++    +.+....+  |-.+.+ .   
T Consensus         5 ~~k~~lI----------TGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   74 (261)
T PRK08690          5 QGKKILI----------TGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQV   74 (261)
T ss_pred             CCcEEEE----------ECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHH
Confidence            4678999          996  669999999999889999998866543333332    22322222  322222 2   


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  .++|++++|+|-
T Consensus        75 ~~~~~~~~--g~iD~lVnnAG~   94 (261)
T PRK08690         75 FADLGKHW--DGLDGLVHSIGF   94 (261)
T ss_pred             HHHHHHHh--CCCcEEEECCcc
Confidence            22222222  369999998863

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=94.01  E-value=0.54  Score=37.56  Aligned_cols=93  Identities=16%  Similarity=0.137  Sum_probs=57.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      .++.+++|          .| .|.+|...++.+...| .+|++.+++.++.+.+. +++... +.....+..    +.  
T Consensus        17 ~~~~~i~i----------iG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~----~~--   78 (155)
T cd01065          17 LKGKKVLI----------LG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLE----EL--   78 (155)
T ss_pred             CCCCEEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchh----hc--
Confidence            44678888          87 5999999999988886 68999999887766543 444321 000111111    11  


Q ss_pred             CCcccEEEeCCChhhH-----HHhhccccCCCEEEEEe
Q 019790          216 GKGVDVILDCMGASYF-----QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       216 ~~~~d~vid~~g~~~~-----~~~~~~l~~~G~~v~~g  248 (335)
                      -..+|+|+.|++....     ......++++..++.++
T Consensus        79 ~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~  116 (155)
T cd01065          79 LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVV  116 (155)
T ss_pred             cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence            1368999999987542     11122345555555554

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=93.95  E-value=0.36  Score=38.89  Aligned_cols=73  Identities=26%  Similarity=0.312  Sum_probs=43.8

Q ss_pred             ccccchHHHHHHHHHhhCCC-eEEEEecC--hhhHHHH----HHcCCCE-EE--eCCCc-cHHHHHHHHh-CCCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQGV-RVFVTAGS--EEKLAVC----KDLGADV-CI--NYKTE-DFVARVKEET-GGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~-~V~~~~~~--~~~~~~~----~~~g~~~-~~--~~~~~-~~~~~~~~~~-~~~~~d~vi  223 (335)
                      +|+++++|.++++.+-..|+ +|+++.++  .++.+.+    +..+... .+  |..+. +....+.+.. ...++|++|
T Consensus         6 tGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li   85 (167)
T PF00106_consen    6 TGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILI   85 (167)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEE
T ss_pred             ECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999988888876 77888888  3443333    3344322 22  22222 1222222221 124799999


Q ss_pred             eCCCh
Q 019790          224 DCMGA  228 (335)
Q Consensus       224 d~~g~  228 (335)
                      .|.|.
T Consensus        86 ~~ag~   90 (167)
T PF00106_consen   86 NNAGI   90 (167)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            98873

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08219 short chain dehydrogenase; Provisional

Probab=93.94  E-value=0.33  Score=41.32  Aligned_cols=76  Identities=17%  Similarity=0.204  Sum_probs=49.2

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCC-Cc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG-KG  218 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~  218 (335)
                      .++||          .||+|.+|..++..+... ++|+++.++.++.+.+.+ .....++..+-.+ .+.+.+.... .+
T Consensus         4 ~~vlV----------tG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   71 (227)
T PRK08219          4 PTALI----------TGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTD-PEAIAAAVEQLGR   71 (227)
T ss_pred             CEEEE----------ecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCC-HHHHHHHHHhcCC
Confidence            46889          999999999998887777 999999998877655543 2111222222222 1233333221 26


Q ss_pred             ccEEEeCCCh
Q 019790          219 VDVILDCMGA  228 (335)
Q Consensus       219 ~d~vid~~g~  228 (335)
                      .|.+|.++|.
T Consensus        72 id~vi~~ag~   81 (227)
T PRK08219         72 LDVLVHNAGV   81 (227)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=93.93  E-value=0.83  Score=36.95  Aligned_cols=87  Identities=16%  Similarity=0.031  Sum_probs=53.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|||          .| .|.+|..-++.+...|++|+++.  ++..+.+.+++.-. +...  .+.+     ..-.+
T Consensus        12 ~~~~vlV----------vG-GG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~~~~--~~~~-----~dl~~   70 (157)
T PRK06719         12 HNKVVVI----------IG-GGKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-WKQK--TFSN-----DDIKD   70 (157)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-EEec--ccCh-----hcCCC
Confidence            4677888          77 59999988888888899999885  33334444444211 2111  1111     11246


Q ss_pred             ccEEEeCCChhhHHHhhccccCCCEEEE
Q 019790          219 VDVILDCMGASYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       219 ~d~vid~~g~~~~~~~~~~l~~~G~~v~  246 (335)
                      +|+|+-+++.+..+..+......+.++-
T Consensus        71 a~lViaaT~d~e~N~~i~~~a~~~~~vn   98 (157)
T PRK06719         71 AHLIYAATNQHAVNMMVKQAAHDFQWVN   98 (157)
T ss_pred             ceEEEECCCCHHHHHHHHHHHHHCCcEE
Confidence            8999999998776655444433333433

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.92  E-value=0.63  Score=41.42  Aligned_cols=95  Identities=17%  Similarity=0.166  Sum_probs=64.7

Q ss_pred             CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      +|+........|.. -++ -.|.+++|          .|.+..+|.-++.++...|++|++.-..               
T Consensus       137 ~PcTp~avi~lL~~-~~i~l~Gk~vvV----------vGrs~~VG~Pla~lL~~~gAtVtv~hs~---------------  190 (285)
T PRK14191        137 VPATPMGVMRLLKH-YHIEIKGKDVVI----------IGASNIVGKPLAMLMLNAGASVSVCHIL---------------  190 (285)
T ss_pred             CCCcHHHHHHHHHH-hCCCCCCCEEEE----------ECCCchhHHHHHHHHHHCCCEEEEEeCC---------------
Confidence            45555555554533 333 36889999          9987899999999999999998876321               


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                          +.    .+.+.+  +..|+++-++|...+.. -+.++++..++.+|...
T Consensus       191 ----t~----~l~~~~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        191 ----TK----DLSFYT--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR  232 (285)
T ss_pred             ----cH----HHHHHH--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence                11    122222  25899999999876522 34668888888988643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=93.92  E-value=1.2  Score=37.65  Aligned_cols=91  Identities=9%  Similarity=0.035  Sum_probs=54.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .+.++||          .| .|.+|...+..+...|++|+++.+... +...+...+. ..+...... ...      -.
T Consensus         9 ~~k~vLV----------IG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~------l~   69 (202)
T PRK06718          9 SNKRVVI----------VG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSD------IV   69 (202)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhh------cC
Confidence            4567888          78 599999988888888999999975432 2222222221 122211111 111      13


Q ss_pred             cccEEEeCCChhhHHHhhccccCCCEEEEEe
Q 019790          218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ++|+||-|++....+..+......+.++...
T Consensus        70 ~adlViaaT~d~elN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         70 DAFLVIAATNDPRVNEQVKEDLPENALFNVI  100 (202)
T ss_pred             CceEEEEcCCCHHHHHHHHHHHHhCCcEEEC
Confidence            6899999999877655444443445555543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.91  E-value=0.39  Score=41.64  Aligned_cols=80  Identities=21%  Similarity=0.234  Sum_probs=48.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH----HHcCCCE-EE--eCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-CI--NYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~----~~~g~~~-~~--~~~~~~-~~~~  209 (335)
                      ++.++||          .|++|.+|..++..+...|++|++. .++.++.+.+    +..+... .+  |-.+.. ....
T Consensus         3 ~~~~vlI----------tGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (250)
T PRK08063          3 SGKVALV----------TGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEM   72 (250)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            3568999          9999999999999999999998764 5665544332    2233322 22  322222 1222


Q ss_pred             HHHHh-CCCcccEEEeCCCh
Q 019790          210 VKEET-GGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~-~~~~~d~vid~~g~  228 (335)
                      +.+.. ...++|++|.++|.
T Consensus        73 ~~~~~~~~~~id~vi~~ag~   92 (250)
T PRK08063         73 FAQIDEEFGRLDVFVNNAAS   92 (250)
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            22211 11268999998873

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.89  E-value=0.4  Score=41.26  Aligned_cols=37  Identities=35%  Similarity=0.452  Sum_probs=31.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  185 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~  185 (335)
                      .+.++||          .|++|.+|..++..+...|++|+++.++..
T Consensus         4 ~~~~vlI----------tG~sg~iG~~l~~~l~~~G~~v~~~~~~~~   40 (248)
T PRK05557          4 EGKVALV----------TGASRGIGRAIAERLAAQGANVVINYASSE   40 (248)
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence            3468999          999999999999999999999988776544

>PRK07775 short chain dehydrogenase; Provisional

Probab=93.88  E-value=0.43  Score=42.26  Aligned_cols=79  Identities=23%  Similarity=0.239  Sum_probs=49.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccHHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARVKE  212 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~~~  212 (335)
                      ..+++|          +|++|.+|..+++.+...|++|+++.++.++.+...    ..+....   .|..+......+.+
T Consensus        10 ~~~vlV----------tGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (274)
T PRK07775         10 RRPALV----------AGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVA   79 (274)
T ss_pred             CCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            457899          999999999999999889999999998776554332    2333222   13333221111111


Q ss_pred             Hh--CCCcccEEEeCCCh
Q 019790          213 ET--GGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~--~~~~~d~vid~~g~  228 (335)
                      ..  .-.++|.+|.++|.
T Consensus        80 ~~~~~~~~id~vi~~Ag~   97 (274)
T PRK07775         80 QAEEALGEIEVLVSGAGD   97 (274)
T ss_pred             HHHHhcCCCCEEEECCCc
Confidence            11  11368999998864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.88  E-value=0.3  Score=43.27  Aligned_cols=81  Identities=19%  Similarity=0.196  Sum_probs=49.4

Q ss_pred             CCCCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHH-HHcCCCEEE--eCCCcc-HH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVCI--NYKTED-FV  207 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~-~~~g~~~~~--~~~~~~-~~  207 (335)
                      +..+.++||          +|++  +++|.+++..+...|++|+++.+++.   +.+.+ ++++....+  |-.+.. ..
T Consensus         7 ~~~~k~~lI----------tGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~   76 (272)
T PRK08159          7 LMAGKRGLI----------LGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASID   76 (272)
T ss_pred             cccCCEEEE----------ECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHH
Confidence            345678999          9986  79999999999999999998877642   33333 234432222  332222 22


Q ss_pred             HHHHHHhC-CCcccEEEeCCC
Q 019790          208 ARVKEETG-GKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~-~~~~d~vid~~g  227 (335)
                      +.+.+... ..++|++++++|
T Consensus        77 ~~~~~~~~~~g~iD~lv~nAG   97 (272)
T PRK08159         77 AVFETLEKKWGKLDFVVHAIG   97 (272)
T ss_pred             HHHHHHHHhcCCCcEEEECCc
Confidence            22222111 136899999886

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=93.84  E-value=0.18  Score=42.95  Aligned_cols=97  Identities=23%  Similarity=0.110  Sum_probs=59.2

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE--EEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~  206 (335)
                      ...++.++++||-          .|  ++.|..+..+++.. .+|+.++.+++..+.+++    .+...  +...+..  
T Consensus        72 ~~l~~~~~~~VLe----------iG--~GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~--  136 (212)
T PRK00312         72 ELLELKPGDRVLE----------IG--TGSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGW--  136 (212)
T ss_pred             HhcCCCCCCEEEE----------EC--CCccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcc--
Confidence            4567788999988          76  33455555566553 489999988887666643    33322  1111111  


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                       +.   ....+.||+|+-...... .....+.|+++|+++..-
T Consensus       137 -~~---~~~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        137 -KG---WPAYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             -cC---CCcCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence             10   111247999886544333 456788999999987653

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.79  E-value=0.36  Score=41.63  Aligned_cols=41  Identities=27%  Similarity=0.379  Sum_probs=34.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC  190 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~  190 (335)
                      +.++||          .|++|.+|..++..+...|++|+++ .++.++.+.+
T Consensus         5 ~~~ilI----------~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~   46 (247)
T PRK05565          5 GKVAIV----------TGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQEL   46 (247)
T ss_pred             CCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            458999          9999999999998888889999998 8876655443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.77  E-value=0.33  Score=42.77  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=47.5

Q ss_pred             CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChh---hHHHHHH-cCCCEEE--eCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~-~~~~  209 (335)
                      .+.++||          +|+++  ++|.+++..+-..|++|+++.+++.   ..+.+.. .+....+  |-.+.+ +.+.
T Consensus         5 ~~k~~lI----------TGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   74 (262)
T PRK07984          5 SGKRILV----------TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAM   74 (262)
T ss_pred             CCCEEEE----------eCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHH
Confidence            4678999          99875  8999999888888999998887642   2222222 2222222  333322 2222


Q ss_pred             HHHHhC-CCcccEEEeCCC
Q 019790          210 VKEETG-GKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~-~~~~d~vid~~g  227 (335)
                      +.+... ..++|++|+++|
T Consensus        75 ~~~~~~~~g~iD~linnAg   93 (262)
T PRK07984         75 FAELGKVWPKFDGFVHSIG   93 (262)
T ss_pred             HHHHHhhcCCCCEEEECCc
Confidence            222211 136899999987

>PRK06523 short chain dehydrogenase; Provisional

Probab=93.77  E-value=0.16  Score=44.44  Aligned_cols=74  Identities=31%  Similarity=0.436  Sum_probs=48.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHH----HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFV----ARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~----~~~~~~  213 (335)
                      .+.++||          .|+++.+|..+++.+...|++|+++.+++....   ..... ...|-.+.+..    +.+.+.
T Consensus         8 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          8 AGKRALV----------TGGTKGIGAATVARLLEAGARVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CCCEEEE----------ECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            4678999          999999999999999999999999998764321   11111 11233332211    122222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .  .++|++++++|
T Consensus        75 ~--~~id~vi~~ag   86 (260)
T PRK06523         75 L--GGVDILVHVLG   86 (260)
T ss_pred             c--CCCCEEEECCc
Confidence            2  36899999887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=93.75  E-value=0.56  Score=40.33  Aligned_cols=79  Identities=19%  Similarity=0.235  Sum_probs=50.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HHHHHHcCCCE-EEeCCCc-cHHHHHHHHhC-
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADV-CINYKTE-DFVARVKEETG-  215 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~~~g~~~-~~~~~~~-~~~~~~~~~~~-  215 (335)
                      +.++||          .|+++.+|.++++.+...|++|+++.++++. .+.++..+... ..|-.+. ...+.+.+... 
T Consensus         2 ~k~vlI----------tGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   71 (236)
T PRK06483          2 PAPILI----------TGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQH   71 (236)
T ss_pred             CceEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence            357899          9999999999999998899999999987653 23344444322 1232222 22222222211 


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                      -.++|+++.++|.
T Consensus        72 ~~~id~lv~~ag~   84 (236)
T PRK06483         72 TDGLRAIIHNASD   84 (236)
T ss_pred             CCCccEEEECCcc
Confidence            1258999998873

>PRK07102 short chain dehydrogenase; Provisional

Probab=93.74  E-value=0.39  Score=41.54  Aligned_cols=40  Identities=23%  Similarity=0.360  Sum_probs=34.5

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      .+++|          .||+|.+|...++.+...|++|+++++++++.+..
T Consensus         2 ~~vlI----------tGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~   41 (243)
T PRK07102          2 KKILI----------IGATSDIARACARRYAAAGARLYLAARDVERLERL   41 (243)
T ss_pred             cEEEE----------EcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            36888          99999999999999999999999999988765443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.73  E-value=0.35  Score=42.00  Aligned_cols=36  Identities=22%  Similarity=0.230  Sum_probs=32.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ++.++||          .|+++.+|..++..+...|++|+++.++.
T Consensus         7 ~~k~vlI----------tGas~~iG~~la~~l~~~G~~v~~~~~~~   42 (252)
T PRK08220          7 SGKTVWV----------TGAAQGIGYAVALAFVEAGAKVIGFDQAF   42 (252)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence            4578999          99999999999999988999999999876

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=93.70  E-value=0.35  Score=48.90  Aligned_cols=115  Identities=19%  Similarity=0.263  Sum_probs=69.5

Q ss_pred             ceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhh
Q 019790           93 GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC  172 (335)
Q Consensus        93 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~  172 (335)
                      +..+|..+++...+.+ +..+.+++=.-..+          ...--.+.++||          +|++|.+|.++++.+..
T Consensus       378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLV----------TGasggIG~aiA~~La~  436 (676)
T TIGR02632       378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFV----------TGGAGGIGRETARRLAA  436 (676)
T ss_pred             cccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEE----------eCCCcHHHHHHHHHHHh
Confidence            3466777777777766 55666665310000          011124678999          99999999999999999


Q ss_pred             CCCeEEEEecChhhHHHHH-H----cCCCE----EEeCCCcc-HHHHHHHHh-CCCcccEEEeCCCh
Q 019790          173 QGVRVFVTAGSEEKLAVCK-D----LGADV----CINYKTED-FVARVKEET-GGKGVDVILDCMGA  228 (335)
Q Consensus       173 ~g~~V~~~~~~~~~~~~~~-~----~g~~~----~~~~~~~~-~~~~~~~~~-~~~~~d~vid~~g~  228 (335)
                      .|++|++++++.+..+.+. .    .+...    ..|-.+.. +.+.+.+.. ...++|++|.++|.
T Consensus       437 ~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       437 EGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            9999999999877655443 1    12211    12333322 222222211 11369999998873

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.69  E-value=0.32  Score=43.19  Aligned_cols=77  Identities=23%  Similarity=0.456  Sum_probs=53.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh----HHHHHHcCCC--EEEeCCC-cc---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGAD--VCINYKT-ED---FVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~----~~~~~~~g~~--~~~~~~~-~~---~~~  208 (335)
                      .|+.+||          +||.+++|.+.++=+-.+|+++++.+.+.+.    .+.+++.|..  .+.|-.+ ++   ..+
T Consensus        37 ~g~~vLI----------TGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~  106 (300)
T KOG1201|consen   37 SGEIVLI----------TGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAK  106 (300)
T ss_pred             cCCEEEE----------eCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHH
Confidence            6889999          9999999998888777889988888766543    3444444422  2233333 22   345


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      ++++..+  .+|++++++|
T Consensus       107 ~Vk~e~G--~V~ILVNNAG  123 (300)
T KOG1201|consen  107 KVKKEVG--DVDILVNNAG  123 (300)
T ss_pred             HHHHhcC--CceEEEeccc
Confidence            6666654  6999999887

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=93.68  E-value=0.45  Score=44.55  Aligned_cols=88  Identities=18%  Similarity=0.219  Sum_probs=54.2

Q ss_pred             ccccchHHHHHHHHHhhCC-C-eEEEEecChhhHHHHHH--cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          156 HGGSSGIGTFAIQMGKCQG-V-RVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g-~-~V~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                      +|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+  .+.....-.-+..-.+.+.+...  +.|+|++|+|....
T Consensus         4 lG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin~~gp~~~   80 (386)
T PF03435_consen    4 LGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR--GCDVVINCAGPFFG   80 (386)
T ss_dssp             E---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE-SSGGGH
T ss_pred             EcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh--cCCEEEECCccchh
Confidence            887 999999999988886 4 89999999999877754  22222111111111234666654  46999999997643


Q ss_pred             HH-hhccccCCCEEEE
Q 019790          232 QR-NLGSLNIDGRLFI  246 (335)
Q Consensus       232 ~~-~~~~l~~~G~~v~  246 (335)
                      .. +-.++..+-.++.
T Consensus        81 ~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   81 EPVARACIEAGVHYVD   96 (386)
T ss_dssp             HHHHHHHHHHT-EEEE
T ss_pred             HHHHHHHHHhCCCeec
Confidence            33 3445555666666

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=93.67  E-value=0.07  Score=27.88  Aligned_cols=22  Identities=45%  Similarity=0.795  Sum_probs=14.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI   25 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~   25 (335)
                      |||+++..+++   +++++++.|.+
T Consensus         1 MkAv~y~G~~~---v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD---VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE---EEEEEE----S
T ss_pred             CcceEEeCCCc---eEEEECCCccc
Confidence            99999998765   89999998865

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=93.67  E-value=1.9  Score=32.42  Aligned_cols=88  Identities=22%  Similarity=0.166  Sum_probs=60.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF----  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~----  231 (335)
                      .| .|.+|...++.++..+.+|++++.++++.+.+++.+.. ++..+..+.  ...+..+-..++.++-+++.+..    
T Consensus         4 ~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~--~~l~~a~i~~a~~vv~~~~~d~~n~~~   79 (116)
T PF02254_consen    4 IG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP--EVLERAGIEKADAVVILTDDDEENLLI   79 (116)
T ss_dssp             ES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH--HHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred             Ec-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh--hHHhhcCccccCEEEEccCCHHHHHHH
Confidence            55 79999999999999777999999999999999988854 443433332  22333344578999988877542    


Q ss_pred             HHhhccccCCCEEEEE
Q 019790          232 QRNLGSLNIDGRLFII  247 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~  247 (335)
                      ...++.+.+..+++..
T Consensus        80 ~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   80 ALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHCCCCeEEEE
Confidence            2334555666777655

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK06701 short chain dehydrogenase; Provisional

Probab=93.64  E-value=0.45  Score=42.61  Aligned_cols=36  Identities=28%  Similarity=0.399  Sum_probs=32.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .+.++||          .|+++.+|..++..+...|++|+++.++.
T Consensus        45 ~~k~iLI----------tGasggIG~~la~~l~~~G~~V~l~~r~~   80 (290)
T PRK06701         45 KGKVALI----------TGGDSGIGRAVAVLFAKEGADIAIVYLDE   80 (290)
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            4678999          99999999999999888999999998764

>PRK05855 short chain dehydrogenase; Validated

Probab=93.61  E-value=0.37  Score=47.39  Aligned_cols=78  Identities=22%  Similarity=0.282  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCccHH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDFV----  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~~----  207 (335)
                      .+.++||          +||+|.+|.++++.+...|++|+++.++.++.+.+.    ..|... .  .|-.+....    
T Consensus       314 ~~~~~lv----------~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  383 (582)
T PRK05855        314 SGKLVVV----------TGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFA  383 (582)
T ss_pred             CCCEEEE----------ECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            4568999          999999999999999999999999999887665443    233322 1  233332211    


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|++|+++|.
T Consensus       384 ~~~~~~~--g~id~lv~~Ag~  402 (582)
T PRK05855        384 EWVRAEH--GVPDIVVNNAGI  402 (582)
T ss_pred             HHHHHhc--CCCcEEEECCcc
Confidence            2222222  368999999874

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.60  E-value=0.42  Score=40.99  Aligned_cols=99  Identities=19%  Similarity=0.137  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE---------EeCCCcc
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---------INYKTED  205 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~---------~~~~~~~  205 (335)
                      .+.++.+||+          .|  .+.|.-+..+|. .|++|++++.++...+.+. +.+....         .....-.
T Consensus        34 ~~~~~~rvL~----------~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~  100 (218)
T PRK13255         34 ALPAGSRVLV----------PL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEIT  100 (218)
T ss_pred             CCCCCCeEEE----------eC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceE
Confidence            3456778999          55  667888888876 5999999999999887653 3322110         0000000


Q ss_pred             -HHHHHHHHh--CCCcccEEEeCCC-----h----hhHHHhhccccCCCEEEEE
Q 019790          206 -FVARVKEET--GGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       206 -~~~~~~~~~--~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~  247 (335)
                       +...+.+..  ....||.|+|...     .    ..+..+.+.|+++|++.++
T Consensus       101 ~~~~D~~~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        101 IYCGDFFALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             EEECcccCCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence             001111111  1136899999553     1    2256778899999975543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.56  E-value=0.5  Score=40.90  Aligned_cols=80  Identities=25%  Similarity=0.333  Sum_probs=47.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCc-cHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTE-DFVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~-~~~~~  209 (335)
                      .+.++||          .|+++.+|..++..+...|++|+++.+ +++..+..    ++.+... .+  |..+. .+.+.
T Consensus         5 ~~~~~lI----------tG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   74 (247)
T PRK12935          5 NGKVAIV----------TGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRL   74 (247)
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence            3678999          999999999999988889999887654 33433332    2233222 12  22221 12222


Q ss_pred             HHHHhC-CCcccEEEeCCCh
Q 019790          210 VKEETG-GKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~-~~~~d~vid~~g~  228 (335)
                      +.+... -..+|++|.|+|.
T Consensus        75 ~~~~~~~~~~id~vi~~ag~   94 (247)
T PRK12935         75 VEEAVNHFGKVDILVNNAGI   94 (247)
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            222111 1358999998874

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.56  E-value=0.52  Score=40.54  Aligned_cols=36  Identities=31%  Similarity=0.358  Sum_probs=30.6

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  185 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~  185 (335)
                      ..++||          .|++|.+|..++..+...|++|+++.++..
T Consensus         6 ~~~vlI----------tGasg~iG~~l~~~l~~~g~~v~~~~~~~~   41 (249)
T PRK12825          6 GRVALV----------TGAARGLGRAIALRLARAGADVVVHYRSDE   41 (249)
T ss_pred             CCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence            458999          999999999999999999999887665543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.54  E-value=0.46  Score=41.43  Aligned_cols=80  Identities=23%  Similarity=0.249  Sum_probs=49.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHh-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKDLGADV-CINYKTED-FVARVKEET-  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~-  214 (335)
                      .+.+++|          .|+++.+|.++++.+...|++|+++.++ ++..+.++..+... ..|-.+.. ..+.+.+.. 
T Consensus         6 ~~k~~lI----------tGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          6 KGKVALI----------TGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHH
Confidence            3578999          9999999999999999999999887654 33344444333322 12333322 222222211 


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                      ...++|++|.|+|.
T Consensus        76 ~~~~id~li~~ag~   89 (255)
T PRK06463         76 EFGRVDVLVNNAGI   89 (255)
T ss_pred             HcCCCCEEEECCCc
Confidence            11368999998863

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.53  E-value=0.34  Score=41.88  Aligned_cols=77  Identities=30%  Similarity=0.335  Sum_probs=47.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhH-HHH---HHcCCCEE---EeCCCcc-HH---
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL-AVC---KDLGADVC---INYKTED-FV---  207 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~-~~~---~~~g~~~~---~~~~~~~-~~---  207 (335)
                      +..+||          +|+++.+|..+++.+...|++|++..+ +..+. +.+   +..+....   .|..+.. ..   
T Consensus         3 ~k~~lV----------tG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   72 (246)
T PRK12938          3 QRIAYV----------TGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAF   72 (246)
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            567899          999999999999999999999888653 22222 222   23344332   2322221 11   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|+++.++|.
T Consensus        73 ~~~~~~~--~~id~li~~ag~   91 (246)
T PRK12938         73 DKVKAEV--GEIDVLVNNAGI   91 (246)
T ss_pred             HHHHHHh--CCCCEEEECCCC
Confidence            2222222  368999999874

>PRK07402 precorrin-6B methylase; Provisional

Probab=93.52  E-value=1.6  Score=36.54  Aligned_cols=100  Identities=19%  Similarity=0.214  Sum_probs=58.5

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADV--CINYKTE  204 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~  204 (335)
                      .....+.++++||-          .|  ++.|..++.+++.. +.+|++++.+++..+.+++    ++...  ++..   
T Consensus        33 ~~~l~~~~~~~VLD----------iG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---   97 (196)
T PRK07402         33 ISQLRLEPDSVLWD----------IG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---   97 (196)
T ss_pred             HHhcCCCCCCEEEE----------eC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---
Confidence            35556778888776          55  34455556666554 5799999999888776653    44332  2222   


Q ss_pred             cHHHHHHHHhCCCcccE-EEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          205 DFVARVKEETGGKGVDV-ILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~-vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +..+.+... .. .+|. .++....  ..+..+.+.|+++|+++...
T Consensus        98 d~~~~~~~~-~~-~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402         98 SAPECLAQL-AP-APDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             chHHHHhhC-CC-CCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            222222221 11 2344 4443222  33677888999999998764

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.51  E-value=0.4  Score=42.03  Aligned_cols=80  Identities=19%  Similarity=0.256  Sum_probs=48.9

Q ss_pred             CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecCh--hhHHHHH-HcCCC---EEEeCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCK-DLGAD---VCINYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~-~~g~~---~~~~~~~~~-~~~~  209 (335)
                      .+.+++|          +|+  ++++|.++++.+...|++|++++++.  +..+.+. +++..   ...|-.+.. ..+.
T Consensus         6 ~~k~~lI----------tGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~   75 (256)
T PRK07889          6 EGKRILV----------TGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASL   75 (256)
T ss_pred             cCCEEEE----------eCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHH
Confidence            4678999          998  79999999999888999999988653  3333332 33321   112333322 2222


Q ss_pred             HHHHh-CCCcccEEEeCCCh
Q 019790          210 VKEET-GGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~-~~~~~d~vid~~g~  228 (335)
                      +.+.. ...++|++++++|.
T Consensus        76 ~~~~~~~~g~iD~li~nAG~   95 (256)
T PRK07889         76 ADRVREHVDGLDGVVHSIGF   95 (256)
T ss_pred             HHHHHHHcCCCcEEEEcccc
Confidence            22111 11369999998863

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.50  E-value=0.81  Score=41.82  Aligned_cols=87  Identities=20%  Similarity=0.158  Sum_probs=60.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE------Ee---CCCccHHHHHHHHhCCCcccEEEeCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC------IN---YKTEDFVARVKEETGGKGVDVILDCM  226 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~------~~---~~~~~~~~~~~~~~~~~~~d~vid~~  226 (335)
                      +| .|.+|.+.+..+...|.+|++..+++++.+.++..+.+..      +.   ....+.    .+..  +..|+||-|+
T Consensus        10 IG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~----~e~~--~~aD~Vi~~v   82 (328)
T PRK14618         10 LG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADP----EEAL--AGADFAVVAV   82 (328)
T ss_pred             EC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCH----HHHH--cCCCEEEEEC
Confidence            77 8999999999988889999999998887777765421110      00   001122    2222  2589999999


Q ss_pred             ChhhHHHhhccccCCCEEEEEec
Q 019790          227 GASYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       227 g~~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .+..+...++.++++-.++.+..
T Consensus        83 ~~~~~~~v~~~l~~~~~vi~~~~  105 (328)
T PRK14618         83 PSKALRETLAGLPRALGYVSCAK  105 (328)
T ss_pred             chHHHHHHHHhcCcCCEEEEEee
Confidence            99888778888887766666643

>TIGR00477 tehB tellurite resistance protein TehB

Probab=93.47  E-value=0.24  Score=41.65  Aligned_cols=94  Identities=16%  Similarity=0.122  Sum_probs=55.8

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVK  211 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~  211 (335)
                      ...++.++|-          .|  .+.|..+..+++ .|++|++++.++...+.+++    .+.....  ...+... . 
T Consensus        27 ~~~~~~~vLD----------iG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~--~~~d~~~-~-   89 (195)
T TIGR00477        27 KTVAPCKTLD----------LG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRT--DAYDINA-A-   89 (195)
T ss_pred             ccCCCCcEEE----------eC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCcee--Eeccchh-c-
Confidence            3444567777          66  456777777776 48899999999887776643    2322111  1111110 0 


Q ss_pred             HHhCCCcccEEEeCC-----Ch----hhHHHhhccccCCCEEEEEe
Q 019790          212 EETGGKGVDVILDCM-----GA----SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       212 ~~~~~~~~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g  248 (335)
                      . .. ..||+|+.+.     ..    ..+..+.+.|+++|.++.+.
T Consensus        90 ~-~~-~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477        90 A-LN-EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             c-cc-CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            0 12 3699998642     21    23567788899999965553

Part of a tellurite-reducing operon tehA and tehB

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.47  E-value=0.84  Score=40.64  Aligned_cols=94  Identities=15%  Similarity=0.124  Sum_probs=65.7

Q ss_pred             CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .|+.....+..|.. .++ -.|.+++|          .|.+..+|.-+..++...|+.|++.-+.               
T Consensus       139 ~PcTp~av~~ll~~-~~i~l~Gk~vvV----------iGrs~iVG~Pla~lL~~~~atVtv~hs~---------------  192 (285)
T PRK10792        139 RPCTPRGIMTLLER-YGIDTYGLNAVV----------VGASNIVGRPMSLELLLAGCTVTVCHRF---------------  192 (285)
T ss_pred             CCCCHHHHHHHHHH-cCCCCCCCEEEE----------ECCCcccHHHHHHHHHHCCCeEEEEECC---------------
Confidence            45555555555533 333 36889999          9988889999999999999998887632               


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                          +.+    +.+.+  +.+|+++.++|...+-. -+.++++-.++.+|..
T Consensus       193 ----T~~----l~~~~--~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin  233 (285)
T PRK10792        193 ----TKN----LRHHV--RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN  233 (285)
T ss_pred             ----CCC----HHHHH--hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence                112    23333  25899999999876422 2678888888888854

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=93.46  E-value=0.51  Score=40.59  Aligned_cols=93  Identities=23%  Similarity=0.305  Sum_probs=60.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC--CCEEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--ADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      -+|-+||=          .|  .+.|+++.-+|+. |++|++++.+++..+.++...  ...-+||.....    .++..
T Consensus        58 l~g~~vLD----------vG--CGgG~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~----edl~~  120 (243)
T COG2227          58 LPGLRVLD----------VG--CGGGILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVNIDYRQATV----EDLAS  120 (243)
T ss_pred             CCCCeEEE----------ec--CCccHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhccccccchhhhH----HHHHh
Confidence            35556666          55  4457777777766 899999999999988887322  112244544322    22222


Q ss_pred             -CCcccEEEe-----CCChhh--HHHhhccccCCCEEEEE
Q 019790          216 -GKGVDVILD-----CMGASY--FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       216 -~~~~d~vid-----~~g~~~--~~~~~~~l~~~G~~v~~  247 (335)
                       ++.||+|+.     .+....  +..+.+.++|+|.++.-
T Consensus       121 ~~~~FDvV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         121 AGGQFDVVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             cCCCccEEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence             258999974     444432  46678899999988764

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=93.41  E-value=0.38  Score=42.25  Aligned_cols=92  Identities=24%  Similarity=0.235  Sum_probs=59.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCC---EEEeCCCccHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD---VCINYKTEDFVARV  210 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~  210 (335)
                      .++.+||-          .|  ++.|..+..+++. |.+|++++.+++..+.+++.    +..   .++.   .+.. .+
T Consensus        43 ~~~~~vLD----------iG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~-~l  105 (255)
T PRK11036         43 PRPLRVLD----------AG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQ-DI  105 (255)
T ss_pred             CCCCEEEE----------eC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHH-HH
Confidence            44567777          66  5667788888875 89999999999988777642    221   1221   1111 12


Q ss_pred             HHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEE
Q 019790          211 KEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~  247 (335)
                      .... ...||+|+-...     .  ..+..+.+.|+|+|+++.+
T Consensus       106 ~~~~-~~~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        106 AQHL-ETPVDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             hhhc-CCCCCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence            2222 347999985432     1  2357788999999999765

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.38  E-value=0.94  Score=40.54  Aligned_cols=42  Identities=19%  Similarity=0.173  Sum_probs=35.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      .+.+++|          .| +|+.|.+++..+...|+ +|++++|+.++.+.+.
T Consensus       126 ~~k~vlI----------lG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        126 SLERVVQ----------LG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             cCCEEEE----------EC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            4567888          77 79999999999999998 8999999988776664

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.31  E-value=0.78  Score=39.75  Aligned_cols=75  Identities=25%  Similarity=0.360  Sum_probs=49.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-E--EeCCCcc-HHH---H
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-C--INYKTED-FVA---R  209 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~--~~~~~~~-~~~---~  209 (335)
                      .++||          .|++|.+|..++..+...|++|++++++.+..+.+.+    .+... .  .|..+.. +..   .
T Consensus         2 ~~vlI----------tGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   71 (255)
T TIGR01963         2 KTALV----------TGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAA   71 (255)
T ss_pred             CEEEE----------cCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            46899          9999999999999998899999999998876655533    22221 1  2333322 222   2


Q ss_pred             HHHHhCCCcccEEEeCCC
Q 019790          210 VKEETGGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g  227 (335)
                      +.+..  .+.|++|-+.+
T Consensus        72 ~~~~~--~~~d~vi~~a~   87 (255)
T TIGR01963        72 AAAEF--GGLDILVNNAG   87 (255)
T ss_pred             HHHhc--CCCCEEEECCC
Confidence            22222  35899998775

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=93.30  E-value=0.35  Score=43.24  Aligned_cols=75  Identities=20%  Similarity=0.098  Sum_probs=49.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCE-EEeCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~  215 (335)
                      .+.+++|          +| +|+.+.+++..+..+|+ +|+++.|+.++.+.+.+ ++... +....   ..+.+.... 
T Consensus       124 ~~k~vlv----------lG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~~-  188 (282)
T TIGR01809       124 AGFRGLV----------IG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAIE-  188 (282)
T ss_pred             CCceEEE----------Ec-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhcc-
Confidence            4678888          87 79999999999999998 79999999887776643 32211 11100   001111211 


Q ss_pred             CCcccEEEeCCChh
Q 019790          216 GKGVDVILDCMGAS  229 (335)
Q Consensus       216 ~~~~d~vid~~g~~  229 (335)
                       ..+|+||+|++..
T Consensus       189 -~~~DiVInaTp~g  201 (282)
T TIGR01809       189 -KAAEVLVSTVPAD  201 (282)
T ss_pred             -cCCCEEEECCCCC
Confidence             3589999998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.27  E-value=0.54  Score=42.65  Aligned_cols=78  Identities=19%  Similarity=0.296  Sum_probs=50.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH-HcC---CC-EE--EeCCCcc-HHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---AD-VC--INYKTED-FVARV  210 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~-~~g---~~-~~--~~~~~~~-~~~~~  210 (335)
                      +.++||          .|+++++|.+++..+...| ++|+++++++++.+.+. ++.   .. ..  .|-.+.. ....+
T Consensus         3 ~k~vlI----------TGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   72 (314)
T TIGR01289         3 KPTVII----------TGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFV   72 (314)
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHH
Confidence            457899          9999999999998888889 89999999887665443 332   11 11  2333322 22222


Q ss_pred             HHHh-CCCcccEEEeCCC
Q 019790          211 KEET-GGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~-~~~~~d~vid~~g  227 (335)
                      .+.. ...++|++|.++|
T Consensus        73 ~~~~~~~~~iD~lI~nAG   90 (314)
T TIGR01289        73 QQFRESGRPLDALVCNAA   90 (314)
T ss_pred             HHHHHhCCCCCEEEECCC
Confidence            2211 1236899999876

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=93.27  E-value=0.67  Score=41.17  Aligned_cols=69  Identities=16%  Similarity=0.283  Sum_probs=48.3

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~  213 (335)
                      +...+.+++|          .| +|+.+.+++..+..+|+ +|+++.|+.++.+.+.+ ++..         +...+   
T Consensus       118 ~~~~~~~vli----------lG-aGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---------~~~~~---  174 (272)
T PRK12550        118 QVPPDLVVAL----------RG-SGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---------WRPDL---  174 (272)
T ss_pred             CCCCCCeEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---------chhhc---
Confidence            3344567888          77 79999999999999998 69999999987776653 3211         10111   


Q ss_pred             hCCCcccEEEeCCCh
Q 019790          214 TGGKGVDVILDCMGA  228 (335)
Q Consensus       214 ~~~~~~d~vid~~g~  228 (335)
                       ....+|+|++|++.
T Consensus       175 -~~~~~dlvINaTp~  188 (272)
T PRK12550        175 -GGIEADILVNVTPI  188 (272)
T ss_pred             -ccccCCEEEECCcc
Confidence             11358999999863

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.25  E-value=0.12  Score=41.22  Aligned_cols=89  Identities=15%  Similarity=0.129  Sum_probs=55.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeC------CCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY------KTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      .| .|++|...+..++..|.+|..+.+++ +.+.+++.|.......      ........   ......+|++|-|+-+.
T Consensus         4 ~G-~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~vKa~   78 (151)
T PF02558_consen    4 IG-AGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAVKAY   78 (151)
T ss_dssp             ES-TSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-SSGG
T ss_pred             EC-cCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEeccc
Confidence            66 79999999999988999999999888 7777776553221111      00000000   01124799999999775


Q ss_pred             hHHH----hhccccCCCEEEEEec
Q 019790          230 YFQR----NLGSLNIDGRLFIIGT  249 (335)
Q Consensus       230 ~~~~----~~~~l~~~G~~v~~g~  249 (335)
                      ....    +...+.++..++.+.+
T Consensus        79 ~~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   79 QLEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             GHHHHHHHHCTGEETTEEEEEESS
T ss_pred             chHHHHHHHhhccCCCcEEEEEeC
Confidence            5443    4445555667776643

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.15  E-value=3.4  Score=34.84  Aligned_cols=80  Identities=19%  Similarity=0.264  Sum_probs=54.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      -.|.+++|          .| .|.+|..+++.+...|++|+++++++++.+.+.+ +++. .++..      .+.    .
T Consensus        26 l~gk~v~I----------~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~------~l~----~   83 (200)
T cd01075          26 LEGKTVAV----------QG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE------EIY----S   83 (200)
T ss_pred             CCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch------hhc----c
Confidence            35678888          87 7999999999999999999999988887776654 4543 23221      111    1


Q ss_pred             CcccEEEeCCChhh-HHHhhcccc
Q 019790          217 KGVDVILDCMGASY-FQRNLGSLN  239 (335)
Q Consensus       217 ~~~d~vid~~g~~~-~~~~~~~l~  239 (335)
                      ..+|+++-|..... ....++.|+
T Consensus        84 ~~~Dv~vp~A~~~~I~~~~~~~l~  107 (200)
T cd01075          84 VDADVFAPCALGGVINDDTIPQLK  107 (200)
T ss_pred             ccCCEEEecccccccCHHHHHHcC
Confidence            25899997655433 344455554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=93.13  E-value=0.65  Score=40.65  Aligned_cols=36  Identities=22%  Similarity=0.370  Sum_probs=31.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .+.++||          .|+++.+|..+++.+...|++|+++.++.
T Consensus         6 ~~k~~lI----------tGa~~gIG~~ia~~l~~~G~~vvi~~~~~   41 (261)
T PRK08936          6 EGKVVVI----------TGGSTGLGRAMAVRFGKEKAKVVINYRSD   41 (261)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4678999          99999999999999999999998887743

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=93.13  E-value=0.4  Score=42.05  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=46.7

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecC------hhhHHHHHHcCCC-EE--EeCCCcc-H
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGS------EEKLAVCKDLGAD-VC--INYKTED-F  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~------~~~~~~~~~~g~~-~~--~~~~~~~-~  206 (335)
                      .+..++|          +|++  +++|.+++..+...|++|+++.++      ++..+.+.+.+.. ..  .|-.+.. .
T Consensus         5 ~~k~~lI----------tGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v   74 (258)
T PRK07370          5 TGKKALV----------TGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQI   74 (258)
T ss_pred             CCcEEEE----------eCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHH
Confidence            4678899          9975  799999999999999999887543      2223333322211 12  2333322 1


Q ss_pred             ---HHHHHHHhCCCcccEEEeCCC
Q 019790          207 ---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ---~~~~~~~~~~~~~d~vid~~g  227 (335)
                         .+.+.+..  .++|++++|+|
T Consensus        75 ~~~~~~~~~~~--g~iD~lv~nag   96 (258)
T PRK07370         75 EETFETIKQKW--GKLDILVHCLA   96 (258)
T ss_pred             HHHHHHHHHHc--CCCCEEEEccc
Confidence               22222222  36999999887

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=93.12  E-value=0.39  Score=46.24  Aligned_cols=77  Identities=16%  Similarity=0.228  Sum_probs=53.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh---------------------hhHHHHHHcCCCE
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------------------EKLAVCKDLGADV  197 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~---------------------~~~~~~~~~g~~~  197 (335)
                      .+.+|+|          .| .|+.|+.++..++..|.+|++..+.+                     ...+.++++|.+.
T Consensus       140 ~~~~V~I----------IG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~  208 (467)
T TIGR01318       140 TGKRVAV----------IG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEF  208 (467)
T ss_pred             CCCeEEE----------EC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEE
Confidence            5678998          88 69999999999999999999987653                     2456667788766


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      .++...... -.+.+..  ..||.||.++|..
T Consensus       209 ~~~~~v~~~-~~~~~~~--~~~D~vilAtGa~  237 (467)
T TIGR01318       209 HLNCEVGRD-ISLDDLL--EDYDAVFLGVGTY  237 (467)
T ss_pred             ECCCEeCCc-cCHHHHH--hcCCEEEEEeCCC
Confidence            554422110 0111222  2599999999974

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>TIGR02415 23BDH acetoin reductases

Probab=93.11  E-value=0.56  Score=40.73  Aligned_cols=73  Identities=22%  Similarity=0.330  Sum_probs=45.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-E--EeCCCcc-HHHHHHHHh-CCCcccEEEeCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTED-FVARVKEET-GGKGVDVILDCM  226 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~-~~~~~~~~~-~~~~~d~vid~~  226 (335)
                      .|++|.+|..+++.+...|++|+++.+++++.+.+    +..+... .  .|-.+.. ..+.+.+.. ...++|++|.++
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~a   85 (254)
T TIGR02415         6 TGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNA   85 (254)
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            99999999999999999999999999887655433    2233221 1  2333322 222222211 112589999988


Q ss_pred             Ch
Q 019790          227 GA  228 (335)
Q Consensus       227 g~  228 (335)
                      |.
T Consensus        86 g~   87 (254)
T TIGR02415        86 GV   87 (254)
T ss_pred             Cc
Confidence            63

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08317 hypothetical protein; Provisional

Probab=93.07  E-value=1.1  Score=38.27  Aligned_cols=98  Identities=19%  Similarity=0.220  Sum_probs=64.3

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHc----CCCE-EEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL----GADV-CINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~  205 (335)
                      +...+.++.+||.          .| +|. |..+..+++..  +.++++++.++...+.+++.    .... ....+...
T Consensus        13 ~~~~~~~~~~vLd----------iG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~   80 (241)
T PRK08317         13 ELLAVQPGDRVLD----------VG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG   80 (241)
T ss_pred             HHcCCCCCCEEEE----------eC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc
Confidence            5567788899988          77 444 88888998887  36899999998888777654    1111 11111111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +     . .....||+|+-...     .  ..+..+.+.|+++|.++...
T Consensus        81 ~-----~-~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         81 L-----P-FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             C-----C-CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            0     0 11246899885322     2  23577889999999998765

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=93.04  E-value=0.29  Score=44.82  Aligned_cols=36  Identities=17%  Similarity=0.222  Sum_probs=32.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ++.++||          +||+|.+|..+++.+...|++|+++.++.
T Consensus         5 ~~~~vlV----------TGatGfiG~~l~~~L~~~G~~V~~~~r~~   40 (340)
T PLN02653          5 PRKVALI----------TGITGQDGSYLTEFLLSKGYEVHGIIRRS   40 (340)
T ss_pred             CCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEEeccc
Confidence            3578999          99999999999999999999999998754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=93.04  E-value=1.7  Score=38.88  Aligned_cols=105  Identities=21%  Similarity=0.270  Sum_probs=72.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c--C-C-CEEEeCCC----ccHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--G-A-DVCINYKT----EDFVA  208 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~--g-~-~~~~~~~~----~~~~~  208 (335)
                      ..+.-|+|          +|..++.|..++.-+..+|.+|++.+.+++..+.++. .  + . ...+|-..    ....+
T Consensus        27 ~~~k~VlI----------TGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~   96 (322)
T KOG1610|consen   27 LSDKAVLI----------TGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQ   96 (322)
T ss_pred             cCCcEEEE----------ecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHH
Confidence            34556999          9999999999999999999999999987776665542 1  1 1 12233333    22355


Q ss_pred             HHHHHhCCCcccEEEeCCChh---------------------------hHHHhhccccC-CCEEEEEeccCC
Q 019790          209 RVKEETGGKGVDVILDCMGAS---------------------------YFQRNLGSLNI-DGRLFIIGTQGG  252 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~  252 (335)
                      .++++++..+.--+++++|-.                           .....+..+++ .||++.+++..+
T Consensus        97 ~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G  168 (322)
T KOG1610|consen   97 WVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG  168 (322)
T ss_pred             HHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence            677778888899999999811                           11234455544 699998877665

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=93.01  E-value=2.8  Score=35.48  Aligned_cols=91  Identities=15%  Similarity=0.145  Sum_probs=57.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .|.+|||          .| .|.+|..-++.+...|++|+++..... ....+.+.+. ..+-..... ...    .  .
T Consensus         8 ~gk~vlV----------vG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~-i~~~~~~~~-~~d----l--~   68 (205)
T TIGR01470         8 EGRAVLV----------VG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGG-ITWLARCFD-ADI----L--E   68 (205)
T ss_pred             CCCeEEE----------EC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCC-EEEEeCCCC-HHH----h--C
Confidence            3567888          87 599999999999999999999986432 3333333332 222111111 111    1  3


Q ss_pred             cccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          218 GVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       218 ~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                      ++++||-+++... ........+..|.++...
T Consensus        69 ~~~lVi~at~d~~ln~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        69 GAFLVIAATDDEELNRRVAHAARARGVPVNVV  100 (205)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHHHcCCEEEEC
Confidence            6899999999874 444555555667666543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=92.95  E-value=0.26  Score=42.22  Aligned_cols=70  Identities=16%  Similarity=0.218  Sum_probs=47.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE-EEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +||+|-+|..++..+...|.+|+.+.++......... ..... ..|..+......+.+   ...+|.||.+++.
T Consensus         4 ~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~---~~~~d~vi~~a~~   75 (236)
T PF01370_consen    4 TGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLE---KANIDVVIHLAAF   75 (236)
T ss_dssp             ETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHH---HHTESEEEEEBSS
T ss_pred             EccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccc---ccCceEEEEeecc
Confidence            9999999999999999999999988877665554432 22222 234444333333322   2368999998874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK00811 spermidine synthase; Provisional

Probab=92.94  E-value=0.73  Score=41.21  Aligned_cols=95  Identities=20%  Similarity=0.242  Sum_probs=59.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCC--------CEEEeCCCccHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA--------DVCINYKTEDFVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~  209 (335)
                      +.++||+          .|  ++.|..+..+++..+. +|++++.+++..+.+++.-.        +.-+.....+..+.
T Consensus        76 ~p~~VL~----------iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~  143 (283)
T PRK00811         76 NPKRVLI----------IG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKF  143 (283)
T ss_pred             CCCEEEE----------Ee--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHH
Confidence            4568999          87  4457778888887664 89999999988887765211        10011111222233


Q ss_pred             HHHHhCCCcccEEEeCCCh-----------hhHHHhhccccCCCEEEEE
Q 019790          210 VKEETGGKGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~~  247 (335)
                      +.+  ..+.||+|+--...           +.+..+.+.|+++|.++..
T Consensus       144 l~~--~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        144 VAE--TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             Hhh--CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            332  23479999863311           1235678899999998865

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=92.93  E-value=0.18  Score=44.02  Aligned_cols=104  Identities=18%  Similarity=0.334  Sum_probs=63.5

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHH----HcCCC--EEEeCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGAD--VCINYK  202 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~----~~g~~--~~~~~~  202 (335)
                      +....++.||++|+-          -|  .+.|.+...+++..|  -+|+.....+++.+.++    ..|..  ..+...
T Consensus        32 I~~~l~i~pG~~VlE----------aG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~   99 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLE----------AG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR   99 (247)
T ss_dssp             HHHHTT--TT-EEEE----------E----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES
T ss_pred             HHHHcCCCCCCEEEE----------ec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec
Confidence            445689999999999          54  455777777787776  38999999998887765    34432  222222


Q ss_pred             CccHH-HHHHHHhCCCcccEEEeCCCh--hhHHHhhccc-cCCCEEEEEec
Q 019790          203 TEDFV-ARVKEETGGKGVDVILDCMGA--SYFQRNLGSL-NIDGRLFIIGT  249 (335)
Q Consensus       203 ~~~~~-~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l-~~~G~~v~~g~  249 (335)
                      +  +. +-..+.. ...+|.||-=...  ..+..+.+.| +++|+++.+..
T Consensus       100 D--v~~~g~~~~~-~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP  147 (247)
T PF08704_consen  100 D--VCEEGFDEEL-ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP  147 (247)
T ss_dssp             ---GGCG--STT--TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred             c--eecccccccc-cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence            2  11 0111111 2368888754444  4678899999 89999998853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=92.93  E-value=1.2  Score=39.03  Aligned_cols=96  Identities=17%  Similarity=0.115  Sum_probs=63.5

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARV  210 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~  210 (335)
                      ....+.++++||-          +|  ++.|..+..+++.. +.+|++++.++...+.+++.... .....+.       
T Consensus        25 ~~~~~~~~~~vLD----------iG--cG~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~-------   85 (258)
T PRK01683         25 ARVPLENPRYVVD----------LG--CGPGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADI-------   85 (258)
T ss_pred             hhCCCcCCCEEEE----------Ec--ccCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECch-------
Confidence            4445677888887          76  44677777888776 57999999999888887754322 2222211       


Q ss_pred             HHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEE
Q 019790          211 KEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~  247 (335)
                      .++.....||+|+-...-       ..+..+.+.|+++|.++..
T Consensus        86 ~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~  129 (258)
T PRK01683         86 ASWQPPQALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ  129 (258)
T ss_pred             hccCCCCCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence            112223479999865431       2357788999999998775

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=92.93  E-value=0.49  Score=42.95  Aligned_cols=40  Identities=20%  Similarity=0.200  Sum_probs=34.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      .|.+|||          +|++|-+|..++..+...|++|+++.++....+
T Consensus         4 ~~~~vlV----------TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   43 (322)
T PLN02986          4 GGKLVCV----------TGASGYIASWIVKLLLLRGYTVKATVRDLTDRK   43 (322)
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence            4678999          999999999999988888999999988765433

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=92.89  E-value=0.7  Score=40.48  Aligned_cols=39  Identities=26%  Similarity=0.430  Sum_probs=32.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL  187 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~  187 (335)
                      ++.++||          .|+++++|.+++..+...|++|+++.+ ++++.
T Consensus         7 ~~k~vlI----------tGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~   46 (260)
T PRK08416          7 KGKTLVI----------SGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEA   46 (260)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence            4678999          999999999999999999999988764 44433

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=92.89  E-value=0.62  Score=40.07  Aligned_cols=68  Identities=18%  Similarity=0.206  Sum_probs=50.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChh--hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .|++|.+|...++.+...+.+|.+.+|+..  ..+.+++.|+..+ .- +.+-.+.+.+...  ++|.||-+++
T Consensus         4 ~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~-d~~~~~~l~~al~--g~d~v~~~~~   73 (233)
T PF05368_consen    4 TGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EA-DYDDPESLVAALK--GVDAVFSVTP   73 (233)
T ss_dssp             ETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES--TT-HHHHHHHHT--TCSEEEEESS
T ss_pred             ECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ec-ccCCHHHHHHHHc--CCceEEeecC
Confidence            999999999999999999999999999764  3556677888544 22 2222345555554  6999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07041 short chain dehydrogenase; Provisional

Probab=92.88  E-value=0.88  Score=38.85  Aligned_cols=71  Identities=28%  Similarity=0.333  Sum_probs=46.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc--CCC-EEE--eCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCI--NYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~--g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +|+++.+|..++..+...|++|++++++.++.+... .+  +.. ..+  |..+......+.+..  +++|.+|.++|.
T Consensus         3 tGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag~   79 (230)
T PRK07041          3 VGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAAD   79 (230)
T ss_pred             ecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCCC
Confidence            899999999999999899999999999876655443 22  221 122  333322222233332  368999998873

>PRK12746 short chain dehydrogenase; Provisional

Probab=92.82  E-value=0.76  Score=39.91  Aligned_cols=39  Identities=26%  Similarity=0.302  Sum_probs=32.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLA  188 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~  188 (335)
                      +.+++|          +|++|.+|..+++.+...|++|++. .++.++.+
T Consensus         6 ~~~ilI----------tGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~   45 (254)
T PRK12746          6 GKVALV----------TGASRGIGRAIAMRLANDGALVAIHYGRNKQAAD   45 (254)
T ss_pred             CCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH
Confidence            568999          9999999999999998889998775 56665543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=92.80  E-value=0.96  Score=41.66  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=50.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc--CCC-EEEeCCCccHHHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCINYKTEDFVARVKEE  213 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~~~~~~~~~  213 (335)
                      ..+.+|||          +||+|-+|..+++.+...|++|+++.++.+..+.+. .+  +.. ..+..+-.+ .+.+.+.
T Consensus         8 ~~~~~vLV----------tG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~   76 (353)
T PLN02896          8 SATGTYCV----------TGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEA   76 (353)
T ss_pred             cCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHH
Confidence            45678999          999999999999999999999999988766544332 21  111 122221111 1233343


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      ..  ++|.||.+++
T Consensus        77 ~~--~~d~Vih~A~   88 (353)
T PLN02896         77 VK--GCDGVFHVAA   88 (353)
T ss_pred             Hc--CCCEEEECCc
Confidence            32  4899998775

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=92.78  E-value=2.8  Score=36.22  Aligned_cols=95  Identities=14%  Similarity=0.197  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHhhCCC-eEEEEecC------hhh--HHH---------------HHHcCCCEEEeCCCccH-HHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGV-RVFVTAGS------EEK--LAV---------------CKDLGADVCINYKTEDF-VARV  210 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~-~V~~~~~~------~~~--~~~---------------~~~~g~~~~~~~~~~~~-~~~~  210 (335)
                      .| .|++|..++..+-+.|. +++.++..      -.+  +..               .++.....-+...+..+ .+.+
T Consensus        36 vG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t~en~  114 (263)
T COG1179          36 VG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFITEENL  114 (263)
T ss_pred             Ee-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhCHhHH
Confidence            66 89999999999999998 67665531      111  111               12222221122222222 3444


Q ss_pred             HHHhCCCcccEEEeCCChhhH--HHhhccccCCCEEEEEeccCC
Q 019790          211 KEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      .++... +||+|+||+.+-..  ..+.-|.+.+=.++..++.++
T Consensus       115 ~~~~~~-~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         115 EDLLSK-GFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             HHHhcC-CCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence            555554 89999999987443  333345555556676655544

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=92.76  E-value=1.2  Score=39.24  Aligned_cols=100  Identities=22%  Similarity=0.152  Sum_probs=63.4

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHHcC-------C-C-EEEeC
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDLG-------A-D-VCINY  201 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~g-------~-~-~~~~~  201 (335)
                      ....+.++++||-          .|  .+.|..+..+++..+  .+|++++.+++..+.+++..       . . ..+..
T Consensus        67 ~~~~~~~~~~VLD----------lG--cGtG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~  134 (261)
T PLN02233         67 SWSGAKMGDRVLD----------LC--CGSGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG  134 (261)
T ss_pred             HHhCCCCCCEEEE----------EC--CcCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc
Confidence            3456778888887          66  444667777777765  58999999999888775421       1 1 11111


Q ss_pred             CCccHHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEecc
Q 019790          202 KTEDFVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      +...+      -.....||.|+-+.+     .  ..+.++.+.|+|+|+++.....
T Consensus       135 d~~~l------p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        135 DATDL------PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             ccccC------CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            11111      012346999976432     1  2367889999999999877543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=92.75  E-value=1.4  Score=35.79  Aligned_cols=82  Identities=22%  Similarity=0.239  Sum_probs=53.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHH-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQR-  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~-  233 (335)
                      +| .|.+|...+.-+...|.+|++.++++++.+.+.+.|+... +    +..+.+ +     ..|+||-|+.+.. ... 
T Consensus         7 IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~----s~~e~~-~-----~~dvvi~~v~~~~~v~~v   74 (163)
T PF03446_consen    7 IG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-D----SPAEAA-E-----QADVVILCVPDDDAVEAV   74 (163)
T ss_dssp             E---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-S----SHHHHH-H-----HBSEEEE-SSSHHHHHHH
T ss_pred             Ec-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-h----hhhhHh-h-----cccceEeecccchhhhhh
Confidence            66 8999999999988899999999999999998888774322 1    112222 1     3699999988733 333 


Q ss_pred             -----hhccccCCCEEEEEec
Q 019790          234 -----NLGSLNIDGRLFIIGT  249 (335)
Q Consensus       234 -----~~~~l~~~G~~v~~g~  249 (335)
                           .+..+.++..++.++.
T Consensus        75 ~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   75 LFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhHHhhccccceEEEecCC
Confidence                 3444555555666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=92.64  E-value=0.39  Score=41.33  Aligned_cols=98  Identities=14%  Similarity=0.177  Sum_probs=62.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCE--EEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADV--CINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~  204 (335)
                      ....++++++||-          .|  ++.|..+..+++..  +.+|+.++.+++..+.+++    .+.+.  ++..+..
T Consensus        39 ~~l~~~~~~~vLD----------iG--cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~  106 (231)
T TIGR02752        39 KRMNVQAGTSALD----------VC--CGTADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAM  106 (231)
T ss_pred             HhcCCCCCCEEEE----------eC--CCcCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechh
Confidence            4456778888888          66  55677777888775  3599999999888776653    22221  1211111


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790          205 DFVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .+      ......||+|+-+..     .  ..+..+.+.|+++|+++.+.
T Consensus       107 ~~------~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~  151 (231)
T TIGR02752       107 EL------PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLE  151 (231)
T ss_pred             cC------CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEE
Confidence            10      012347999975432     1  23566788999999998764

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=92.64  E-value=1.4  Score=39.44  Aligned_cols=35  Identities=17%  Similarity=0.232  Sum_probs=29.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecCh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE  184 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~  184 (335)
                      .+.+++|          +|+ |++|.+++..+...|++ |+++.|+.
T Consensus       125 ~~k~vlI----------~GA-GGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTV----------IGA-GGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEE----------ECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            4678899          885 89999999888888995 99999985

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.57  E-value=1.4  Score=39.33  Aligned_cols=94  Identities=18%  Similarity=0.178  Sum_probs=65.0

Q ss_pred             CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .|+.....+..|.. -++ -.|.+++|          .|.+..+|.-+..++...|+.|++....               
T Consensus       144 ~PcTp~av~~ll~~-~~i~l~Gk~vvV----------iGrs~iVGkPla~lL~~~~atVtv~hs~---------------  197 (287)
T PRK14176        144 VPCTPHGVIRALEE-YGVDIEGKNAVI----------VGHSNVVGKPMAAMLLNRNATVSVCHVF---------------  197 (287)
T ss_pred             CCCcHHHHHHHHHH-cCCCCCCCEEEE----------ECCCcccHHHHHHHHHHCCCEEEEEecc---------------
Confidence            45544445555533 333 47889999          9988889999999999999998777621               


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                          +.+    +.+.+  +.+|+++.++|...+- --+.++++-.++.+|..
T Consensus       198 ----T~~----l~~~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin  238 (287)
T PRK14176        198 ----TDD----LKKYT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             ----CCC----HHHHH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEeccc
Confidence                111    22222  2589999999987643 24578888888888864

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=92.57  E-value=1.3  Score=39.66  Aligned_cols=59  Identities=22%  Similarity=0.364  Sum_probs=47.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEEeCC
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYK  202 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~~~  202 (335)
                      ....++||.+|+-           ..+|..|++++.+++.+|++++++..   +.++++.++.+|+..++...
T Consensus        55 ~~G~l~pG~tIVE-----------~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          55 KRGLLKPGGTIVE-----------ATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HcCCCCCCCEEEE-----------cCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            4567899997766           45789999999999999999888764   77888889999998776554

>PLN02214 cinnamoyl-CoA reductase

Probab=92.56  E-value=0.91  Score=41.70  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=48.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH--HHHHcC---CCE-EEeCCCccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLG---ADV-CINYKTEDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~--~~~~~g---~~~-~~~~~~~~~~~~~~~  212 (335)
                      ++.++||          +|++|-+|..++..+...|.+|++++++.+...  .+..+.   ... .+..+-.+ ...+.+
T Consensus         9 ~~~~vlV----------TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~   77 (342)
T PLN02214          9 AGKTVCV----------TGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKA   77 (342)
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHH
Confidence            4678999          999999999999999999999999998765321  122221   111 12111111 223333


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ...  ++|+||.+++.
T Consensus        78 ~~~--~~d~Vih~A~~   91 (342)
T PLN02214         78 AID--GCDGVFHTASP   91 (342)
T ss_pred             HHh--cCCEEEEecCC
Confidence            332  58999998863

>PRK12827 short chain dehydrogenase; Provisional

Probab=92.54  E-value=0.91  Score=39.14  Aligned_cols=34  Identities=26%  Similarity=0.354  Sum_probs=29.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG  182 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~  182 (335)
                      .+.++||          .|++|.+|..++..+...|++|+++.+
T Consensus         5 ~~~~ilI----------tGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          5 DSRRVLI----------TGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            3568999          999999999999988889999988654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=92.52  E-value=0.37  Score=42.79  Aligned_cols=56  Identities=13%  Similarity=0.155  Sum_probs=39.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .||+|-+|..+++.+...|.+|+++.++.              .|..+   .+.+.+...+..+|+|+++++.
T Consensus         5 ~G~tG~iG~~l~~~l~~~g~~v~~~~r~~--------------~d~~~---~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         5 TGANGQLGRELVQQLSPEGRVVVALTSSQ--------------LDLTD---PEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             EcCCCHHHHHHHHHHHhcCCEEEEeCCcc--------------cCCCC---HHHHHHHHHhCCCCEEEECCcc
Confidence            99999999999999999999999998751              12222   1233333333457888888763

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=92.48  E-value=0.67  Score=44.20  Aligned_cols=83  Identities=22%  Similarity=0.339  Sum_probs=50.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHH--
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ--  232 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~--  232 (335)
                      +||.|.+|.+.+..++..|.+|++.++++++. +.+.++|... .    .+..+.    .  ...|+||-|+......  
T Consensus         6 IGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-~----~~~~e~----~--~~aDvVIlavp~~~~~~v   74 (437)
T PRK08655          6 IGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-A----NDNIDA----A--KDADIVIISVPINVTEDV   74 (437)
T ss_pred             EecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-c----cCHHHH----h--ccCCEEEEecCHHHHHHH
Confidence            88789999999999999999999999887764 4445566421 1    111111    1  2357777777654332  


Q ss_pred             --HhhccccCCCEEEEEec
Q 019790          233 --RNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       233 --~~~~~l~~~G~~v~~g~  249 (335)
                        .....++++..++.++.
T Consensus        75 l~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         75 IKEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHHhhCCCCCEEEEccc
Confidence              22333444555555543

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=92.46  E-value=1.3  Score=35.11  Aligned_cols=96  Identities=15%  Similarity=0.058  Sum_probs=65.4

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      .++........+....---.|.+++|          +|.+..+|.-++.++...|++|+...+...              
T Consensus         8 ~p~t~~a~~~ll~~~~~~~~gk~v~V----------vGrs~~vG~pla~lL~~~gatV~~~~~~t~--------------   63 (140)
T cd05212           8 VSPVAKAVKELLNKEGVRLDGKKVLV----------VGRSGIVGAPLQCLLQRDGATVYSCDWKTI--------------   63 (140)
T ss_pred             cccHHHHHHHHHHHcCCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEeCCCCc--------------
Confidence            44444444444533322347889999          999999999999999999999988874321              


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                           +..+.+      +..|+|+-++|...+ ---++++++-.++.+|...
T Consensus        64 -----~l~~~v------~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          64 -----QLQSKV------HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK  103 (140)
T ss_pred             -----CHHHHH------hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence                 111111      258999999998753 2246788888888776543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK12744 short chain dehydrogenase; Provisional

Probab=92.42  E-value=0.88  Score=39.69  Aligned_cols=34  Identities=21%  Similarity=0.367  Sum_probs=29.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG  182 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~  182 (335)
                      .+.++||          .|+++.+|.+++..+...|++|+++++
T Consensus         7 ~~k~vlI----------tGa~~gIG~~~a~~l~~~G~~vv~i~~   40 (257)
T PRK12744          7 KGKVVLI----------AGGAKNLGGLIARDLAAQGAKAVAIHY   40 (257)
T ss_pred             CCcEEEE----------ECCCchHHHHHHHHHHHCCCcEEEEec
Confidence            3568999          999999999999999989999777654

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=92.41  E-value=1.8  Score=38.68  Aligned_cols=42  Identities=17%  Similarity=0.190  Sum_probs=34.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      .+.+++|          .| +|+.+.+++..+..+|+ +++++.|+.++.+.+.
T Consensus       126 ~~k~vli----------lG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        126 KLDSVVQ----------VG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             CCCeEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            4677888          87 79999999988888997 7999999988776664

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=92.41  E-value=1.1  Score=38.64  Aligned_cols=75  Identities=19%  Similarity=0.217  Sum_probs=54.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH--cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  233 (335)
                      .| .|.+|...++.+...|.+|+++.+++++.+...+  ... +++..+..+  ....+..+-..+|+++-++|.+..+.
T Consensus         6 iG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~--~~~L~~agi~~aD~vva~t~~d~~N~   81 (225)
T COG0569           6 IG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD--EDVLEEAGIDDADAVVAATGNDEVNS   81 (225)
T ss_pred             EC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC--HHHHHhcCCCcCCEEEEeeCCCHHHH
Confidence            56 8999999999999999999999999998877433  444 333333322  23344445567999999999866544


Q ss_pred             h
Q 019790          234 N  234 (335)
Q Consensus       234 ~  234 (335)
                      .
T Consensus        82 i   82 (225)
T COG0569          82 V   82 (225)
T ss_pred             H
Confidence            3

>PRK09135 pteridine reductase; Provisional

Probab=92.41  E-value=0.92  Score=39.08  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=31.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      .+.++||          +|++|.+|..++..+...|++|++++++
T Consensus         5 ~~~~vlI----------tGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          5 SAKVALI----------TGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            3568999          9999999999999998899999999975

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=92.37  E-value=0.31  Score=37.90  Aligned_cols=80  Identities=15%  Similarity=0.172  Sum_probs=49.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  233 (335)
                      +| +|.+|..+...++..|.+|..+. ++.+..+.+.. ++...+.+..         +..  ...|++|-++..+.+..
T Consensus        16 IG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~---------~~~--~~aDlv~iavpDdaI~~   83 (127)
T PF10727_consen   16 IG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLE---------EIL--RDADLVFIAVPDDAIAE   83 (127)
T ss_dssp             EC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TT---------GGG--CC-SEEEE-S-CCHHHH
T ss_pred             EC-CCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccc---------ccc--ccCCEEEEEechHHHHH
Confidence            77 79999999999999999988874 55555566554 3433333221         111  36899999999988877


Q ss_pred             hhccccCC-----CEEEEE
Q 019790          234 NLGSLNID-----GRLFII  247 (335)
Q Consensus       234 ~~~~l~~~-----G~~v~~  247 (335)
                      ..+.|...     |+++.-
T Consensus        84 va~~La~~~~~~~g~iVvH  102 (127)
T PF10727_consen   84 VAEQLAQYGAWRPGQIVVH  102 (127)
T ss_dssp             HHHHHHCC--S-TT-EEEE
T ss_pred             HHHHHHHhccCCCCcEEEE
Confidence            77766544     666544

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=92.36  E-value=1.5  Score=41.17  Aligned_cols=94  Identities=20%  Similarity=0.288  Sum_probs=62.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH-HHcCCCEEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      -.+.++|+          +| +|-+|..++..+...|. +|++..|+.++...+ +++++..+ .      .+.+.+.+.
T Consensus       176 L~~~~vlv----------IG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~------l~el~~~l~  237 (414)
T COG0373         176 LKDKKVLV----------IG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A------LEELLEALA  237 (414)
T ss_pred             cccCeEEE----------Ec-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c------HHHHHHhhh
Confidence            35667888          77 79999999999999996 899999999887655 46884432 1      123333333


Q ss_pred             CCcccEEEeCCChhh--H--HHhhccccCCCE--EEEEeccC
Q 019790          216 GKGVDVILDCMGASY--F--QRNLGSLNIDGR--LFIIGTQG  251 (335)
Q Consensus       216 ~~~~d~vid~~g~~~--~--~~~~~~l~~~G~--~v~~g~~~  251 (335)
                        .+|+||-++|+..  +  ......++..-+  ++.++.+.
T Consensus       238 --~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         238 --EADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             --hCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence              5899999998864  1  233444444333  45666554

>PRK05599 hypothetical protein; Provisional

Probab=92.34  E-value=0.64  Score=40.43  Aligned_cols=70  Identities=20%  Similarity=0.221  Sum_probs=45.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC--EEE--eCCCcc-H---HHHHHHHhCCCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCI--NYKTED-F---VARVKEETGGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~--~~~--~~~~~~-~---~~~~~~~~~~~~~d~vi  223 (335)
                      .|+++++|.+.+..+. .|++|+++.+++++.+.+.    +.+..  ..+  |-.+.+ .   .+.+.+..  +++|+++
T Consensus         6 tGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~--g~id~lv   82 (246)
T PRK05599          6 LGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA--GEISLAV   82 (246)
T ss_pred             EeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc--CCCCEEE
Confidence            9999999999988776 4999999999887765542    23322  122  333322 2   22333322  3689999


Q ss_pred             eCCCh
Q 019790          224 DCMGA  228 (335)
Q Consensus       224 d~~g~  228 (335)
                      .+.|.
T Consensus        83 ~nag~   87 (246)
T PRK05599         83 VAFGI   87 (246)
T ss_pred             EecCc
Confidence            88874

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=92.33  E-value=0.48  Score=47.59  Aligned_cols=77  Identities=19%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh---------------------hHHHHHHcCCCE
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---------------------KLAVCKDLGADV  197 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~  197 (335)
                      .+.+|+|          +| .|+.|+.++..++..|.+|++..+.+.                     +.+.++++|.+.
T Consensus       309 ~~kkVaI----------IG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~  377 (639)
T PRK12809        309 RSEKVAV----------IG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDF  377 (639)
T ss_pred             CCCEEEE----------EC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEE
Confidence            4788999          88 699999999999999999999986652                     456667788776


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      .++...... -.+.+..  ..||.||.++|..
T Consensus       378 ~~~~~v~~~-~~~~~l~--~~~DaV~latGa~  406 (639)
T PRK12809        378 HLNCEIGRD-ITFSDLT--SEYDAVFIGVGTY  406 (639)
T ss_pred             EcCCccCCc-CCHHHHH--hcCCEEEEeCCCC
Confidence            665432110 0112222  3699999999874

>PRK07023 short chain dehydrogenase; Provisional

Probab=92.30  E-value=0.56  Score=40.54  Aligned_cols=35  Identities=26%  Similarity=0.283  Sum_probs=30.9

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      ++||          .|++|.+|..+++.+...|++|++++++.+.
T Consensus         3 ~vlI----------tGasggiG~~ia~~l~~~G~~v~~~~r~~~~   37 (243)
T PRK07023          3 RAIV----------TGHSRGLGAALAEQLLQPGIAVLGVARSRHP   37 (243)
T ss_pred             eEEE----------ecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence            5888          9999999999999998889999999987553

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.27  E-value=1  Score=39.03  Aligned_cols=77  Identities=25%  Similarity=0.379  Sum_probs=47.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHHH-HcCCCE-EE--eCCCcc-HH---HHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DLGADV-CI--NYKTED-FV---ARV  210 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~-~~g~~~-~~--~~~~~~-~~---~~~  210 (335)
                      +.++||          +|++|.+|..++..+...|++|+++.+ ++.+.+.+. .++... .+  |..+.. +.   +.+
T Consensus         5 ~k~ilI----------tGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (253)
T PRK08642          5 EQTVLV----------TGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATA   74 (253)
T ss_pred             CCEEEE----------eCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            467999          999999999999999889999988754 444443332 333221 12  332221 22   222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+.. +.++|++|.+.|
T Consensus        75 ~~~~-g~~id~li~~ag   90 (253)
T PRK08642         75 TEHF-GKPITTVVNNAL   90 (253)
T ss_pred             HHHh-CCCCeEEEECCC
Confidence            2222 234899999875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.25  E-value=0.56  Score=41.23  Aligned_cols=79  Identities=16%  Similarity=0.282  Sum_probs=47.3

Q ss_pred             CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecC---hhhHHHHH-HcCCCEE--EeCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS---EEKLAVCK-DLGADVC--INYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~---~~~~~~~~-~~g~~~~--~~~~~~~-~~~~  209 (335)
                      .+.++||          .|+  ++++|.++++.+...|++|+++.+.   +++.+.+. +++....  .|-.+.+ ..+.
T Consensus         5 ~~k~vlI----------tGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          5 AGKRILI----------TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             CCcEEEE----------eCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHH
Confidence            4678999          995  5799999999888899999987543   33333332 3343222  2333322 2222


Q ss_pred             HHHHhC-CCcccEEEeCCC
Q 019790          210 VKEETG-GKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~-~~~~d~vid~~g  227 (335)
                      +.+... .+++|++++++|
T Consensus        75 ~~~~~~~~g~iD~lvnnAG   93 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIG   93 (260)
T ss_pred             HHHHHHHhCCCcEEEEccc
Confidence            222111 136999999886

>PRK07069 short chain dehydrogenase; Validated

Probab=92.21  E-value=0.81  Score=39.59  Aligned_cols=34  Identities=26%  Similarity=0.381  Sum_probs=29.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV  189 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~  189 (335)
                      +|+++.+|..+++.+...|++|+++.++ .++.+.
T Consensus         5 tG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~   39 (251)
T PRK07069          5 TGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDA   39 (251)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHH
Confidence            9999999999999998899999999987 544443

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.21  E-value=0.72  Score=40.07  Aligned_cols=34  Identities=24%  Similarity=0.323  Sum_probs=30.1

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .++||          .|++|.+|..++..+...|++|++++++.
T Consensus         3 k~vlI----------tG~sg~iG~~la~~L~~~g~~vi~~~r~~   36 (256)
T PRK12745          3 PVALV----------TGGRRGIGLGIARALAAAGFDLAINDRPD   36 (256)
T ss_pred             cEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence            46888          99999999999999999999999998753

>PRK07574 formate dehydrogenase; Provisional

Probab=92.18  E-value=0.89  Score=42.48  Aligned_cols=89  Identities=17%  Similarity=0.098  Sum_probs=58.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|..+++.++..|++|++.+++....+..+..+... .    .+    +.+..  +.
T Consensus       191 ~gktVGI----------vG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~-~----~~----l~ell--~~  248 (385)
T PRK07574        191 EGMTVGI----------VG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY-H----VS----FDSLV--SV  248 (385)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee-c----CC----HHHHh--hc
Confidence            4567877          77 899999999999999999999998753333333444321 1    11    22222  24


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+.+.+...     + ...+..|+++..+|.++.
T Consensus       249 aDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  285 (385)
T PRK07574        249 CDVVTIHCPLHPETEHLFDADVLSRMKRGSYLVNTAR  285 (385)
T ss_pred             CCEEEEcCCCCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence            788888887422     1 345777888877776654

>PRK06940 short chain dehydrogenase; Provisional

Probab=92.16  E-value=0.83  Score=40.49  Aligned_cols=71  Identities=21%  Similarity=0.288  Sum_probs=43.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .|+ +.+|.+++..+. .|++|+++++++++.+.+.    ..+... .  .|-.+.. ....+.+.....++|++|.++|
T Consensus         8 tGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG   85 (275)
T PRK06940          8 IGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAG   85 (275)
T ss_pred             ECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            775 899999998885 7999999999876654432    223222 2  2333322 2222222211236999999987


Q ss_pred             h
Q 019790          228 A  228 (335)
Q Consensus       228 ~  228 (335)
                      .
T Consensus        86 ~   86 (275)
T PRK06940         86 V   86 (275)
T ss_pred             c
Confidence            3

>PRK07201 short chain dehydrogenase; Provisional

Probab=92.14  E-value=0.65  Score=46.71  Aligned_cols=78  Identities=26%  Similarity=0.312  Sum_probs=51.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc-HHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED-FVARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~~~~  211 (335)
                      +.+++|          +||++.+|..++..+...|++|++++++++..+.+.    ..+... .  .|-.+.. ..+.+.
T Consensus       371 ~k~vlI----------tGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~  440 (657)
T PRK07201        371 GKVVLI----------TGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVK  440 (657)
T ss_pred             CCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            567999          999999999999998888999999999887765543    223222 1  2322222 222222


Q ss_pred             HHh-CCCcccEEEeCCC
Q 019790          212 EET-GGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~-~~~~~d~vid~~g  227 (335)
                      +.. ...++|+++.++|
T Consensus       441 ~~~~~~g~id~li~~Ag  457 (657)
T PRK07201        441 DILAEHGHVDYLVNNAG  457 (657)
T ss_pred             HHHHhcCCCCEEEECCC
Confidence            211 1125899999887

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=92.10  E-value=1.6  Score=39.16  Aligned_cols=95  Identities=12%  Similarity=0.134  Sum_probs=65.2

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHHHHcCCCEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKDLGADVC  198 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~~~~g~~~~  198 (335)
                      +|+.....+..|....---.|.++.|          +|.++.+|.-++.++...|+.|++.. ++..             
T Consensus       138 ~PcTp~ai~~ll~~~~i~~~Gk~V~v----------iGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------  194 (296)
T PRK14188        138 VPCTPLGCMMLLRRVHGDLSGLNAVV----------IGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------  194 (296)
T ss_pred             cCCCHHHHHHHHHHhCCCCCCCEEEE----------EcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------
Confidence            45555555555533322357889999          99999999999999999999999884 4431             


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                             .    .+.+  +..|+|+-|+|...+... ..++++..++.+|...
T Consensus       195 -------l----~e~~--~~ADIVIsavg~~~~v~~-~~lk~GavVIDvGin~  233 (296)
T PRK14188        195 -------L----PAVC--RRADILVAAVGRPEMVKG-DWIKPGATVIDVGINR  233 (296)
T ss_pred             -------H----HHHH--hcCCEEEEecCChhhcch-heecCCCEEEEcCCcc
Confidence                   1    2222  247999999998763221 2388888888888643

>PRK07340 ornithine cyclodeaminase; Validated

Probab=92.07  E-value=1.6  Score=39.47  Aligned_cols=101  Identities=15%  Similarity=0.115  Sum_probs=67.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhh-CCC-eEEEEecChhhHHHHH-HcC---CCEEEeCCCccHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLG---ADVCINYKTEDFVARVK  211 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~-~V~~~~~~~~~~~~~~-~~g---~~~~~~~~~~~~~~~~~  211 (335)
                      ....+++|          .| +|..|.+.+..+.. .+. +|.+..+++++.+.+. ++.   ....    ..+..+.+ 
T Consensus       123 ~~~~~v~I----------iG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~----~~~~~~av-  186 (304)
T PRK07340        123 APPGDLLL----------IG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE----PLDGEAIP-  186 (304)
T ss_pred             CCCCEEEE----------EC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE----ECCHHHHh-
Confidence            35567888          77 89999998888865 465 7999999988766554 332   2211    12222222 


Q ss_pred             HHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhH
Q 019790          212 EETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITS  261 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  261 (335)
                           ..+|+|+.|+++.. +...  .++++-.+..+|.......+++..-
T Consensus       187 -----~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~~  230 (304)
T PRK07340        187 -----EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTPDMAELAPRT  230 (304)
T ss_pred             -----hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCCCcccCCHHH
Confidence                 26899999998854 3232  4788888899998776656666553

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=92.06  E-value=0.95  Score=41.06  Aligned_cols=39  Identities=18%  Similarity=0.254  Sum_probs=33.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL  187 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~  187 (335)
                      .+.++||          +||+|.+|..++..+...|++|+++.++....
T Consensus         4 ~~k~vlV----------tG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~   42 (325)
T PLN02989          4 GGKVVCV----------TGASGYIASWIVKLLLFRGYTINATVRDPKDR   42 (325)
T ss_pred             CCCEEEE----------ECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence            4678999          99999999999999999999999888775543

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=92.04  E-value=3.3  Score=35.67  Aligned_cols=90  Identities=13%  Similarity=0.261  Sum_probs=56.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC---eEEEEecC----hhh--------HHHHHHcCCCEEEeCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV---RVFVTAGS----EEK--------LAVCKDLGADVCINYK  202 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~---~V~~~~~~----~~~--------~~~~~~~g~~~~~~~~  202 (335)
                      -.+.+++|          .| +|..|..++..+...|+   ++++++++    .++        .+.++.++... .+  
T Consensus        23 l~~~rvlv----------lG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~--   88 (226)
T cd05311          23 IEEVKIVI----------NG-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG--   88 (226)
T ss_pred             ccCCEEEE----------EC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc--
Confidence            45678988          88 69999999998888897   49999987    333        22333433211 11  


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEEe
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g  248 (335)
                       .++.+.+      +.+|++|++++...+ ...++.+.++..++.+.
T Consensus        89 -~~l~~~l------~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          89 -GTLKEAL------KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             -CCHHHHH------hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence             1222222      248999999974333 45566677766555444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=92.00  E-value=1.2  Score=40.63  Aligned_cols=75  Identities=17%  Similarity=0.225  Sum_probs=48.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHH-HcCC-CE-EE--eCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGA-DV-CI--NYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~-~~g~-~~-~~--~~~~~~~~~~~~  211 (335)
                      .+.++||          +||+|.+|..++..+...|  .+|++++++......+. .+.. .. .+  |-.+   .+.+.
T Consensus         3 ~~k~vLV----------TGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d---~~~l~   69 (324)
T TIGR03589         3 NNKSILI----------TGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD---KERLT   69 (324)
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC---HHHHH
Confidence            3578999          9999999999998887775  68998887765543332 2221 11 22  2222   22334


Q ss_pred             HHhCCCcccEEEeCCCh
Q 019790          212 EETGGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~  228 (335)
                      +...  ++|+||.+++.
T Consensus        70 ~~~~--~iD~Vih~Ag~   84 (324)
T TIGR03589        70 RALR--GVDYVVHAAAL   84 (324)
T ss_pred             HHHh--cCCEEEECccc
Confidence            4332  48999998863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=91.95  E-value=0.72  Score=38.99  Aligned_cols=78  Identities=22%  Similarity=0.321  Sum_probs=55.0

Q ss_pred             CCEEEEeecccccccccc-ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEEeCCC-cc---HHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKT-ED---FVARVKE  212 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g-~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~---~~~~~~~  212 (335)
                      ...|||          .| +.|++|.+++.=....|+.|+++.|+-+....+. ++|.. .-+|-.. ..   +...+++
T Consensus         7 ~k~VlI----------tgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~   76 (289)
T KOG1209|consen    7 PKKVLI----------TGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA   76 (289)
T ss_pred             CCeEEE----------eecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence            456888          54 5899999999988889999999999999888876 66642 2234333 22   2334444


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ... +..|+.++++|.
T Consensus        77 ~~~-Gkld~L~NNAG~   91 (289)
T KOG1209|consen   77 NPD-GKLDLLYNNAGQ   91 (289)
T ss_pred             CCC-CceEEEEcCCCC
Confidence            444 479999997764

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=91.92  E-value=1.4  Score=39.35  Aligned_cols=65  Identities=15%  Similarity=0.089  Sum_probs=46.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                      +| .|.+|...+..++..|.+|++.+++++..+.+.+.|.....   ..+. +.    .  ...|+||-|+.....
T Consensus         6 IG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-~~----~--~~aDlVilavp~~~~   70 (279)
T PRK07417          6 VG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STDL-SL----L--KDCDLVILALPIGLL   70 (279)
T ss_pred             Ee-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCCH-hH----h--cCCCEEEEcCCHHHH
Confidence            66 89999999888888899999999999888888776642111   1111 11    1  257999999887554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=91.91  E-value=0.57  Score=41.12  Aligned_cols=76  Identities=20%  Similarity=0.186  Sum_probs=48.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHh-C
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVARVKEET-G  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~-~  215 (335)
                      .+.++||          .|+++.+|.++++.+...|++|+++.+++++.+.   ..... ..|-.+.. +.+.+.+.. .
T Consensus         8 ~~k~vlI----------tG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          8 QGKIIIV----------TGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3568999          9999999999999999999999999877654321   11111 12333322 222122111 1


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                      ..++|+++.++|
T Consensus        75 ~g~id~li~~Ag   86 (266)
T PRK06171         75 FGRIDGLVNNAG   86 (266)
T ss_pred             cCCCCEEEECCc
Confidence            136899999887

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=91.90  E-value=0.7  Score=42.36  Aligned_cols=33  Identities=15%  Similarity=0.115  Sum_probs=30.2

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ++||          +||+|-+|..+++.+...|.+|++++++.
T Consensus         2 ~vlV----------TGatGfIG~~l~~~L~~~G~~V~~~~r~~   34 (343)
T TIGR01472         2 IALI----------TGITGQDGSYLAEFLLEKGYEVHGLIRRS   34 (343)
T ss_pred             eEEE----------EcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence            6888          99999999999999999999999998764

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=91.87  E-value=0.8  Score=39.21  Aligned_cols=73  Identities=23%  Similarity=0.263  Sum_probs=43.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecCh-hhHH----HHHHcCCCE-E--EeCCCccHHHH-HHHHh-CCCcccEEEeC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGADV-C--INYKTEDFVAR-VKEET-GGKGVDVILDC  225 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~----~~~~~g~~~-~--~~~~~~~~~~~-~~~~~-~~~~~d~vid~  225 (335)
                      .|++|.+|..++..+...|++|+++.++. ++.+    .+...+... .  .|-.+....+. +.+.. .-.++|.++.+
T Consensus         4 tG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   83 (239)
T TIGR01830         4 TGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNN   83 (239)
T ss_pred             ECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            89999999999999998999999998764 2222    223334321 1  23333222111 11110 01368999998


Q ss_pred             CCh
Q 019790          226 MGA  228 (335)
Q Consensus       226 ~g~  228 (335)
                      .|.
T Consensus        84 ag~   86 (239)
T TIGR01830        84 AGI   86 (239)
T ss_pred             CCC
Confidence            874

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=91.87  E-value=1.8  Score=39.50  Aligned_cols=88  Identities=19%  Similarity=0.163  Sum_probs=61.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          .| .|.+|.+.++.++..|++|....++.. .+..+..++.++ +     +    .+..  +.
T Consensus       145 ~gktvGI----------iG-~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~-~-----l----~ell--~~  200 (324)
T COG1052         145 RGKTLGI----------IG-LGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV-D-----L----DELL--AE  200 (324)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec-c-----H----HHHH--Hh
Confidence            4678888          77 899999999999999999999998865 333334444332 1     2    2222  14


Q ss_pred             ccEEEeCCCh-hhH-----HHhhccccCCCEEEEEecc
Q 019790          219 VDVILDCMGA-SYF-----QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       219 ~d~vid~~g~-~~~-----~~~~~~l~~~G~~v~~g~~  250 (335)
                      .|++.-+.+. ...     ...+..|++++.+|-.+.-
T Consensus       201 sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG  238 (324)
T COG1052         201 SDIISLHCPLTPETRHLINAEELAKMKPGAILVNTARG  238 (324)
T ss_pred             CCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence            7888876664 221     4568889999999877643

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=91.87  E-value=1.6  Score=35.44  Aligned_cols=98  Identities=13%  Similarity=0.157  Sum_probs=58.0

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       119 ~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .+|+.....+..|....---+|.+++|          .|.+..+|.-+..++...|+.|+..-..-              
T Consensus        15 ~~PcTp~aii~lL~~~~~~l~Gk~v~V----------vGrs~~VG~Pla~lL~~~~atVt~~h~~T--------------   70 (160)
T PF02882_consen   15 FVPCTPLAIIELLEYYGIDLEGKKVVV----------VGRSNIVGKPLAMLLLNKGATVTICHSKT--------------   70 (160)
T ss_dssp             S--HHHHHHHHHHHHTT-STTT-EEEE----------E-TTTTTHHHHHHHHHHTT-EEEEE-TTS--------------
T ss_pred             CcCCCHHHHHHHHHhcCCCCCCCEEEE----------ECCcCCCChHHHHHHHhCCCeEEeccCCC--------------
Confidence            344544555555544333357889999          99889999999999999999988865321              


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCC
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                           .+    +.+.+  +..|+|+.++|...+-. -+.++++..++.+|....
T Consensus        71 -----~~----l~~~~--~~ADIVVsa~G~~~~i~-~~~ik~gavVIDvG~~~~  112 (160)
T PF02882_consen   71 -----KN----LQEIT--RRADIVVSAVGKPNLIK-ADWIKPGAVVIDVGINYV  112 (160)
T ss_dssp             -----SS----HHHHH--TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEEE
T ss_pred             -----Cc----cccee--eeccEEeeeeccccccc-cccccCCcEEEecCCccc
Confidence                 11    12222  25899999999866422 457788888888876543

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK04457 spermidine synthase; Provisional

Probab=91.85  E-value=2.8  Score=36.97  Aligned_cols=95  Identities=18%  Similarity=0.188  Sum_probs=60.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHc-CC----CEEEeCCCccHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL-GA----DVCINYKTEDFVARVK  211 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~~~~~  211 (335)
                      .+..+||+          +|  ++.|..+..+++.. +.++++++.+++-.+.+++. +.    ..+ .....+..+.+.
T Consensus        65 ~~~~~vL~----------IG--~G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv-~v~~~Da~~~l~  131 (262)
T PRK04457         65 PRPQHILQ----------IG--LGGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERF-EVIEADGAEYIA  131 (262)
T ss_pred             CCCCEEEE----------EC--CCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCce-EEEECCHHHHHH
Confidence            45567888          77  34577888888777 56999999999988888753 21    111 111133333333


Q ss_pred             HHhCCCcccEEEe-CCC----------hhhHHHhhccccCCCEEEEE
Q 019790          212 EETGGKGVDVILD-CMG----------ASYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       212 ~~~~~~~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~  247 (335)
                      ..  ...||+|+- +..          .+.+..+.+.|+++|.++.-
T Consensus       132 ~~--~~~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        132 VH--RHSTDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             hC--CCCCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            22  247999973 221          12356778899999999763

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=91.83  E-value=1.4  Score=41.93  Aligned_cols=99  Identities=15%  Similarity=0.088  Sum_probs=58.5

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH----HcCCCE-E--EeCCCcc
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGADV-C--INYKTED  205 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~  205 (335)
                      ..+.++|++||=          .+  .+.|..+..+++..+ .+|++++.++++.+.++    ..|... +  .+.+...
T Consensus       233 ~L~~~~g~~VLD----------lc--ag~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~  300 (426)
T TIGR00563       233 WLAPQNEETILD----------AC--AAPGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG  300 (426)
T ss_pred             HhCCCCCCeEEE----------eC--CCccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc
Confidence            346678888776          54  333444445555554 69999999999887664    355442 2  2211111


Q ss_pred             HHHHHHHHhCCCcccEEEe---CCChh--------------------------hHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILD---CMGAS--------------------------YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid---~~g~~--------------------------~~~~~~~~l~~~G~~v~~g  248 (335)
                      .    ........||.|+-   |+|..                          .+..+++.|++||+++...
T Consensus       301 ~----~~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst  368 (426)
T TIGR00563       301 P----SQWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT  368 (426)
T ss_pred             c----cccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            1    01112346999874   55421                          2356788899999998664

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=91.82  E-value=0.85  Score=39.17  Aligned_cols=70  Identities=31%  Similarity=0.428  Sum_probs=43.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH-HH---cCCCE---EEeCCCcc-HHH---HHHHHhCCCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KD---LGADV---CINYKTED-FVA---RVKEETGGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~-~~---~g~~~---~~~~~~~~-~~~---~~~~~~~~~~~d~vi  223 (335)
                      +|++|.+|..++..+...|++|+++.+ ++++.+.. .+   .+...   ..|..+.. +.+   .+.+..  .++|.+|
T Consensus         6 tG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~vi   83 (242)
T TIGR01829         6 TGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL--GPIDVLV   83 (242)
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc--CCCcEEE
Confidence            999999999999999999999999887 44433322 11   22211   12333322 222   222222  3689999


Q ss_pred             eCCC
Q 019790          224 DCMG  227 (335)
Q Consensus       224 d~~g  227 (335)
                      .+.|
T Consensus        84 ~~ag   87 (242)
T TIGR01829        84 NNAG   87 (242)
T ss_pred             ECCC
Confidence            9987

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK09134 short chain dehydrogenase; Provisional

Probab=91.81  E-value=1.2  Score=38.75  Aligned_cols=77  Identities=17%  Similarity=0.230  Sum_probs=47.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHH----HHcCCCE-EE--eCCCcc-HHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADV-CI--NYKTED-FVA-  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~----~~~g~~~-~~--~~~~~~-~~~-  208 (335)
                      .+.++||          .|+++.+|..++..+...|++|+++.+. .+..+.+    +..+... .+  |..+.. ..+ 
T Consensus         8 ~~k~vlI----------tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   77 (258)
T PRK09134          8 APRAALV----------TGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRAL   77 (258)
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            3568999          9999999999999888899999887653 3333322    1223322 12  333322 222 


Q ss_pred             --HHHHHhCCCcccEEEeCCC
Q 019790          209 --RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 --~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+..  .++|++|.|+|
T Consensus        78 ~~~~~~~~--~~iD~vi~~ag   96 (258)
T PRK09134         78 VARASAAL--GPITLLVNNAS   96 (258)
T ss_pred             HHHHHHHc--CCCCEEEECCc
Confidence              222222  36899999987

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=91.71  E-value=4  Score=38.13  Aligned_cols=60  Identities=15%  Similarity=0.169  Sum_probs=43.7

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  185 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~  185 (335)
                      ..++|.+.....++- .++.. .+. -+|.+|.|          .| .|.+|..+++.+...|++|+++..+..
T Consensus       181 ~r~~aTg~Gv~~~~~-~a~~~-~g~~l~G~rVaV----------QG-~GNVg~~aa~~l~~~GAkvva~sds~g  241 (411)
T COG0334         181 GRSEATGYGVFYAIR-EALKA-LGDDLEGARVAV----------QG-FGNVGQYAAEKLHELGAKVVAVSDSKG  241 (411)
T ss_pred             CCCcccceehHHHHH-HHHHH-cCCCcCCCEEEE----------EC-ccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            344555555555554 44433 333 48889999          77 899999999999999999999987655

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=91.64  E-value=1.7  Score=43.39  Aligned_cols=89  Identities=9%  Similarity=0.037  Sum_probs=65.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHH---
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ---  232 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~---  232 (335)
                      .| .|.+|...++.++..|.++++++.++++.+.+++.|...++ .+..+  .++.+..+-..+|.++-+++++..+   
T Consensus       406 ~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~--~~~L~~agi~~A~~vv~~~~d~~~n~~i  481 (601)
T PRK03659        406 VG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY-GDATQ--LELLRAAGAEKAEAIVITCNEPEDTMKI  481 (601)
T ss_pred             ec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEE-eeCCC--HHHHHhcCCccCCEEEEEeCCHHHHHHH
Confidence            56 89999999999999999999999999999999988875543 22222  2344444556799999999985432   


Q ss_pred             -HhhccccCCCEEEEEe
Q 019790          233 -RNLGSLNIDGRLFIIG  248 (335)
Q Consensus       233 -~~~~~l~~~G~~v~~g  248 (335)
                       ...+.+.|+-+++.-.
T Consensus       482 ~~~~r~~~p~~~IiaRa  498 (601)
T PRK03659        482 VELCQQHFPHLHILARA  498 (601)
T ss_pred             HHHHHHHCCCCeEEEEe
Confidence             3345566777777654

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=91.61  E-value=0.9  Score=41.09  Aligned_cols=90  Identities=13%  Similarity=0.133  Sum_probs=54.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-CCCEEEeCCCccHHHHHHHH--hCCCcccEEEeCCChhhH-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEE--TGGKGVDVILDCMGASYF-  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~d~vid~~g~~~~-  231 (335)
                      +| .|++|......+...|.+|+.+.|++++.+.+++. |. .+..... ...-.....  .....+|++|-|+=+... 
T Consensus         8 iG-aGaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK~~~~~   84 (305)
T PRK05708          8 LG-AGSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQ-ASLYAIPAETADAAEPIHRLLLACKAYDAE   84 (305)
T ss_pred             EC-CCHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCc-ceeeccCCCCcccccccCEEEEECCHHhHH
Confidence            77 79999888877777899999999988777777643 32 2211111 000000000  011378999999876543 


Q ss_pred             ---HHhhccccCCCEEEEEe
Q 019790          232 ---QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       232 ---~~~~~~l~~~G~~v~~g  248 (335)
                         ......+.++..++.+.
T Consensus        85 ~al~~l~~~l~~~t~vv~lQ  104 (305)
T PRK05708         85 PAVASLAHRLAPGAELLLLQ  104 (305)
T ss_pred             HHHHHHHhhCCCCCEEEEEe
Confidence               33445566677776663

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=91.57  E-value=2  Score=33.44  Aligned_cols=91  Identities=13%  Similarity=0.240  Sum_probs=54.5

Q ss_pred             ccccchHHHHHHHHHhhCC--CeEEEEecCh--hh-HHHHHHcCCCEEEeCCCccH-------------------HHHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQG--VRVFVTAGSE--EK-LAVCKDLGADVCINYKTEDF-------------------VARVK  211 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~--~~-~~~~~~~g~~~~~~~~~~~~-------------------~~~~~  211 (335)
                      .|++|.+|..+..+.+...  ++|+......  +. .+.++++....+.-.+....                   .+.+.
T Consensus         4 LGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~~l~   83 (129)
T PF02670_consen    4 LGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPEGLE   83 (129)
T ss_dssp             ESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHHHHH
T ss_pred             EcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChHHHH
Confidence            8999999999999999996  6888876432  22 24456788777664443221                   11222


Q ss_pred             HHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEE
Q 019790          212 EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~  246 (335)
                      +......+|+++.++.+. -+...+..++.+-++.+
T Consensus        84 ~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   84 ELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence            333334688888876553 36666666665544443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PLN02928 oxidoreductase family protein

Probab=91.55  E-value=2.2  Score=39.32  Aligned_cols=96  Identities=20%  Similarity=0.202  Sum_probs=59.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC----C-CEEEeCCCccHHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----A-DVCINYKTEDFVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g----~-~~~~~~~~~~~~~~~~~~  213 (335)
                      .|.++.|          +| .|.+|..+++.++..|++|++..++...... ..++    . ....+... . ...+.+.
T Consensus       158 ~gktvGI----------iG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~~~L~el  223 (347)
T PLN02928        158 FGKTVFI----------LG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-G-HEDIYEF  223 (347)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hhhccccccccccccccC-c-ccCHHHH
Confidence            4678888          87 8999999999999999999999876322111 1110    0 00000000 0 1123333


Q ss_pred             hCCCcccEEEeCCChhh-----H-HHhhccccCCCEEEEEecc
Q 019790          214 TGGKGVDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~~  250 (335)
                      ..  ..|+|+.+.+...     + ...+..|+++..+|-++..
T Consensus       224 l~--~aDiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        224 AG--EADIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             Hh--hCCEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence            32  4799999887421     1 4678889999888887643

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=91.54  E-value=3.6  Score=34.09  Aligned_cols=95  Identities=19%  Similarity=0.236  Sum_probs=58.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~  205 (335)
                      ....+.++.++|-          .|  ++.|..++.+++.. +.+|++++.+++..+.+++    .+..  .++..+   
T Consensus        25 ~~l~~~~~~~vLD----------iG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d---   89 (187)
T PRK08287         25 SKLELHRAKHLID----------VG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE---   89 (187)
T ss_pred             HhcCCCCCCEEEE----------EC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC---
Confidence            4446677888777          66  33466666667665 4699999999887766643    3322  122211   


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790          206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (335)
                      ...    .. ...||+|+.....    ..+..+.+.|+++|+++..
T Consensus        90 ~~~----~~-~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         90 API----EL-PGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             chh----hc-CcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence            111    11 1369999864322    2356678999999998764

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.52  E-value=1.5  Score=39.38  Aligned_cols=94  Identities=16%  Similarity=0.140  Sum_probs=63.9

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +|+........|....---.|.+|.+          .|.++.+|.-.+.++...|++|++..+...              
T Consensus       139 ~PcTp~aii~lL~~~~i~l~Gk~V~v----------IG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------  194 (301)
T PRK14194        139 TPCTPSGCLRLLEDTCGDLTGKHAVV----------IGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------  194 (301)
T ss_pred             CCCcHHHHHHHHHHhCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------
Confidence            45555555555533322346888988          886679999999999999999999864321              


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEEecc
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~  250 (335)
                           +    +.+.+  +..|+|+-++|...+ ...  .++++..++.+|..
T Consensus       195 -----~----l~e~~--~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin  233 (301)
T PRK14194        195 -----D----AKALC--RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN  233 (301)
T ss_pred             -----C----HHHHH--hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence                 1    12222  247999999998653 322  38888888888754

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.50  E-value=2.2  Score=37.97  Aligned_cols=96  Identities=15%  Similarity=0.184  Sum_probs=65.2

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +|+.....+..|....---.|.+++|          .|.+..+|.-+..++...|+.|++.-.                 
T Consensus       136 ~PcTp~avi~lL~~~~i~l~Gk~vvV----------iGrS~iVGkPla~lL~~~~atVtichs-----------------  188 (282)
T PRK14169        136 VASTPYGIMALLDAYDIDVAGKRVVI----------VGRSNIVGRPLAGLMVNHDATVTIAHS-----------------  188 (282)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEECC-----------------
Confidence            44444445544533322247889999          999999999999999999998886631                 


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                        .+.++    .+.+  +..|+++-++|...+-. -+.++++-.++.+|...
T Consensus       189 --~T~~l----~~~~--~~ADIvI~AvG~p~~i~-~~~vk~GavVIDvGin~  231 (282)
T PRK14169        189 --KTRNL----KQLT--KEADILVVAVGVPHFIG-ADAVKPGAVVIDVGISR  231 (282)
T ss_pred             --CCCCH----HHHH--hhCCEEEEccCCcCccC-HHHcCCCcEEEEeeccc
Confidence              11222    2222  24799999999876522 45788888888988654

>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes

Probab=91.48  E-value=0.54  Score=40.31  Aligned_cols=100  Identities=21%  Similarity=0.178  Sum_probs=59.4

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCc---------
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTE---------  204 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~---------  204 (335)
                      ....++.++||          -|  .+-|.-+..+|.. |.+|++++-++...+.+. +.+..........         
T Consensus        33 l~~~~~~rvLv----------Pg--CG~g~D~~~La~~-G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i   99 (218)
T PF05724_consen   33 LALKPGGRVLV----------PG--CGKGYDMLWLAEQ-GHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRI   99 (218)
T ss_dssp             HTTSTSEEEEE----------TT--TTTSCHHHHHHHT-TEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSE
T ss_pred             cCCCCCCeEEE----------eC--CCChHHHHHHHHC-CCeEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCce
Confidence            45678889999          44  5556777777765 999999999999888873 3332111100000         


Q ss_pred             -cHHHHHHHHhCC--CcccEEEeCCCh---------hhHHHhhccccCCCEEEEE
Q 019790          205 -DFVARVKEETGG--KGVDVILDCMGA---------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       205 -~~~~~~~~~~~~--~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~  247 (335)
                       -+...+-+....  +.||.|+|+..-         ....++.+.|+++|++.++
T Consensus       100 ~~~~gDfF~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~lLi  154 (218)
T PF05724_consen  100 TIYCGDFFELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGLLI  154 (218)
T ss_dssp             EEEES-TTTGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEEEE
T ss_pred             EEEEcccccCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence             000011111111  269999997642         2246778899999995444

Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.42  E-value=3.4  Score=36.83  Aligned_cols=96  Identities=16%  Similarity=0.142  Sum_probs=66.5

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +|+.....+..|....---.|.+++|          .|.+..+|.-+..++...|+.|++.-.                 
T Consensus       139 ~PcTp~avi~ll~~y~i~l~Gk~vvV----------iGrS~iVGkPla~lL~~~~atVt~chs-----------------  191 (284)
T PRK14177        139 LPCTPYGMVLLLKEYGIDVTGKNAVV----------VGRSPILGKPMAMLLTEMNATVTLCHS-----------------  191 (284)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCCcchHHHHHHHHHCCCEEEEeCC-----------------
Confidence            45544444544533322356889999          999999999999999999998887652                 


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                        ++.+.    .+.+  +..|+++-++|...+-. -+.++++-.++.+|...
T Consensus       192 --~T~~l----~~~~--~~ADIvIsAvGk~~~i~-~~~ik~gavVIDvGin~  234 (284)
T PRK14177        192 --KTQNL----PSIV--RQADIIVGAVGKPEFIK-ADWISEGAVLLDAGYNP  234 (284)
T ss_pred             --CCCCH----HHHH--hhCCEEEEeCCCcCccC-HHHcCCCCEEEEecCcc
Confidence              12222    2222  25899999999877522 56788898889998643

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=91.38  E-value=1.9  Score=42.50  Aligned_cols=88  Identities=10%  Similarity=0.089  Sum_probs=61.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF----  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~----  231 (335)
                      .| .|.+|..+++.++..|.++++++.++++.+.+++.+...+. .+..+  ++..+..+-+.+|.++-+++++..    
T Consensus       423 ~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~--~~~L~~a~i~~a~~viv~~~~~~~~~~i  498 (558)
T PRK10669        423 VG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVL-GNAAN--EEIMQLAHLDCARWLLLTIPNGYEAGEI  498 (558)
T ss_pred             EC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEE-cCCCC--HHHHHhcCccccCEEEEEcCChHHHHHH
Confidence            56 89999999999999999999999999999999988766544 22222  233333444578988877766431    


Q ss_pred             HHhhccccCCCEEEEE
Q 019790          232 QRNLGSLNIDGRLFII  247 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~  247 (335)
                      ....+...++-+++..
T Consensus       499 v~~~~~~~~~~~iiar  514 (558)
T PRK10669        499 VASAREKRPDIEIIAR  514 (558)
T ss_pred             HHHHHHHCCCCeEEEE
Confidence            2233444555666654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=91.38  E-value=0.45  Score=42.79  Aligned_cols=88  Identities=17%  Similarity=0.109  Sum_probs=54.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC---CccHHHHHHHHhCCCcccEEEeCCChhhHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK---TEDFVARVKEETGGKGVDVILDCMGASYFQ  232 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~d~vid~~g~~~~~  232 (335)
                      +| +|.+|.+.+..+...|.+|+++++++++.+.+++.|.... +..   .........+.   .++|++|-|+....+.
T Consensus         6 iG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~---~~~d~vila~k~~~~~   80 (304)
T PRK06522          6 LG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLE-DGEITVPVLAADDPAEL---GPQDLVILAVKAYQLP   80 (304)
T ss_pred             EC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCccc-CCceeecccCCCChhHc---CCCCEEEEecccccHH
Confidence            77 7999999988888889999999998887777766554210 000   00000011111   4799999999876554


Q ss_pred             Hhhccc----cCCCEEEEEe
Q 019790          233 RNLGSL----NIDGRLFIIG  248 (335)
Q Consensus       233 ~~~~~l----~~~G~~v~~g  248 (335)
                      .++..+    .++..++.+.
T Consensus        81 ~~~~~l~~~l~~~~~iv~~~  100 (304)
T PRK06522         81 AALPSLAPLLGPDTPVLFLQ  100 (304)
T ss_pred             HHHHHHhhhcCCCCEEEEec
Confidence            444444    3445566553

>PLN02240 UDP-glucose 4-epimerase

Probab=91.35  E-value=1.1  Score=41.22  Aligned_cols=34  Identities=29%  Similarity=0.439  Sum_probs=30.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      +.++||          .|++|.+|..+++.+...|.+|+++++.
T Consensus         5 ~~~vlI----------tGatG~iG~~l~~~L~~~g~~V~~~~~~   38 (352)
T PLN02240          5 GRTILV----------TGGAGYIGSHTVLQLLLAGYKVVVIDNL   38 (352)
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            468999          9999999999999998889999998753

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=91.30  E-value=0.74  Score=40.92  Aligned_cols=91  Identities=12%  Similarity=0.185  Sum_probs=54.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHHHHHHHhCCCc-ccEEEeCCChh---
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVARVKEETGGKG-VDVILDCMGAS---  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~~~~~-~d~vid~~g~~---  229 (335)
                      +|++|.+|..+++.+...|.+|.+++|++++..   ..+... ..|..+.+ +.+.++....-.+ +|.+|-+.+..   
T Consensus         5 tGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~~   81 (285)
T TIGR03649         5 TGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPDL   81 (285)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCCh
Confidence            999999999999999999999999999876432   122222 23444432 2222211111135 89998777631   


Q ss_pred             --hHHHhhccccCCC--EEEEEec
Q 019790          230 --YFQRNLGSLNIDG--RLFIIGT  249 (335)
Q Consensus       230 --~~~~~~~~l~~~G--~~v~~g~  249 (335)
                        .....++.++..|  +++.++.
T Consensus        82 ~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        82 APPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             hHHHHHHHHHHHHcCCCEEEEeec
Confidence              1233444444443  6777654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.29  E-value=2.3  Score=37.92  Aligned_cols=96  Identities=17%  Similarity=0.163  Sum_probs=64.9

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      .||........|....---.|.+++|          .|.+..+|.-+..++...++.|++.-.                 
T Consensus       138 ~PcTp~av~~lL~~~~i~l~Gk~vvV----------iGrS~iVG~Pla~lL~~~~atVt~chs-----------------  190 (284)
T PRK14190        138 LPCTPHGILELLKEYNIDISGKHVVV----------VGRSNIVGKPVGQLLLNENATVTYCHS-----------------  190 (284)
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEEeC-----------------
Confidence            44444444444433222247889999          999999999999999999999887631                 


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                        .+.+    +.+.+  +..|+++-++|...+ ---+.++++..++.+|...
T Consensus       191 --~t~~----l~~~~--~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        191 --KTKN----LAELT--KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             --Cchh----HHHHH--HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence              1111    22222  248999999998764 2245678888888988654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=91.28  E-value=2  Score=43.00  Aligned_cols=88  Identities=11%  Similarity=0.158  Sum_probs=63.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF----  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~----  231 (335)
                      .| .|.+|...++.++..|.++++++.++++.+.+++.|...++ .+..+  .++.+..+-..+|.++-+++++..    
T Consensus       406 ~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~--~~~L~~agi~~A~~vvv~~~d~~~n~~i  481 (621)
T PRK03562        406 AG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFY-GDATR--MDLLESAGAAKAEVLINAIDDPQTSLQL  481 (621)
T ss_pred             Ee-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEE-EeCCC--HHHHHhcCCCcCCEEEEEeCCHHHHHHH
Confidence            66 89999999999999999999999999999999988875443 23222  233444455678999999987542    


Q ss_pred             HHhhccccCCCEEEEE
Q 019790          232 QRNLGSLNIDGRLFII  247 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~  247 (335)
                      ....+.+.|+-+++.-
T Consensus       482 ~~~ar~~~p~~~iiaR  497 (621)
T PRK03562        482 VELVKEHFPHLQIIAR  497 (621)
T ss_pred             HHHHHHhCCCCeEEEE
Confidence            2334555566666554

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=91.27  E-value=2.2  Score=38.24  Aligned_cols=97  Identities=14%  Similarity=0.116  Sum_probs=66.7

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       119 ~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .+|+.....+..|....---.|.+++|          .|.+..+|.-+..++...|+.|++.-..               
T Consensus       146 ~~PcTp~avi~lL~~~~i~l~Gk~vvV----------IGRS~iVGkPla~lL~~~~ATVtvchs~---------------  200 (299)
T PLN02516        146 FLPCTPKGCLELLSRSGIPIKGKKAVV----------VGRSNIVGLPVSLLLLKADATVTVVHSR---------------  200 (299)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEeCCC---------------
Confidence            345555555555543332346889999          9999999999999999999988887421               


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                          +.+.    .+.+  +..|+++-++|...+- --++++++-.++.+|...
T Consensus       201 ----T~nl----~~~~--~~ADIvv~AvGk~~~i-~~~~vk~gavVIDvGin~  242 (299)
T PLN02516        201 ----TPDP----ESIV--READIVIAAAGQAMMI-KGDWIKPGAAVIDVGTNA  242 (299)
T ss_pred             ----CCCH----HHHH--hhCCEEEEcCCCcCcc-CHHHcCCCCEEEEeeccc
Confidence                1222    2222  2579999999986432 246788898888988654

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=91.27  E-value=0.58  Score=47.12  Aligned_cols=75  Identities=16%  Similarity=0.258  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh---------------------hHHHHHHcCCCE
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---------------------KLAVCKDLGADV  197 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~  197 (335)
                      .+.+|+|          +| +|+.|++++..+...|++|+++.+.+.                     +.+.++++|.+.
T Consensus       326 ~~~~VaI----------IG-aGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~  394 (654)
T PRK12769        326 SDKRVAI----------IG-AGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEF  394 (654)
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEE
Confidence            5778999          88 799999999999999999999986532                     344556677655


Q ss_pred             EEeCCC-ccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          198 CINYKT-EDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       198 ~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .++..- .+.  .+.+..  ..||.+|.++|.
T Consensus       395 ~~~~~v~~~i--~~~~~~--~~~DavilAtGa  422 (654)
T PRK12769        395 ELNCEVGKDI--SLESLL--EDYDAVFVGVGT  422 (654)
T ss_pred             ECCCEeCCcC--CHHHHH--hcCCEEEEeCCC
Confidence            443321 111  111111  269999999886

>PRK04266 fibrillarin; Provisional

Probab=91.25  E-value=4.3  Score=34.97  Aligned_cols=100  Identities=15%  Similarity=0.075  Sum_probs=58.4

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH----cCCCEEEeCCCccHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFV  207 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~  207 (335)
                      +..++++|++||=          .|  .+.|..+..+++..+ .+|++++.+++..+.+.+    ...-..+..+.... 
T Consensus        66 ~~l~i~~g~~VlD----------~G--~G~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~-  132 (226)
T PRK04266         66 KNFPIKKGSKVLY----------LG--AASGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKP-  132 (226)
T ss_pred             hhCCCCCCCEEEE----------Ec--cCCCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCc-
Confidence            3468889998887          66  334555566666653 489999999876664432    21112222222111 


Q ss_pred             HHHHHHhCCCcccEEEeCCChh-----hHHHhhccccCCCEEEEE
Q 019790          208 ARVKEETGGKGVDVILDCMGAS-----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~-----~~~~~~~~l~~~G~~v~~  247 (335)
                      ...... . ..+|+++-.....     .+..+.+.|+++|+++..
T Consensus       133 ~~~~~l-~-~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        133 ERYAHV-V-EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             chhhhc-c-ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            000111 1 2599998544321     246778899999999874

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.23  E-value=1.1  Score=38.38  Aligned_cols=72  Identities=18%  Similarity=0.266  Sum_probs=46.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .+.+++|          .|+++.+|..++..+...|++|+++.++.....     ... ..+..+-.+..+.+.+..  .
T Consensus         4 ~~k~~lV----------tGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~--~   66 (235)
T PRK06550          4 MTKTVLI----------TGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----SGNFHFLQLDLSDDLEPLFDWV--P   66 (235)
T ss_pred             CCCEEEE----------cCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----CCcEEEEECChHHHHHHHHHhh--C
Confidence            3568999          999999999999988888999999987653321     111 112111111123333333  3


Q ss_pred             cccEEEeCCC
Q 019790          218 GVDVILDCMG  227 (335)
Q Consensus       218 ~~d~vid~~g  227 (335)
                      ++|+++.++|
T Consensus        67 ~id~lv~~ag   76 (235)
T PRK06550         67 SVDILCNTAG   76 (235)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK13243 glyoxylate reductase; Reviewed

Probab=91.21  E-value=2  Score=39.41  Aligned_cols=87  Identities=16%  Similarity=0.163  Sum_probs=57.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|...++.++..|++|++.+++.... .....+..  .    .++.+    ...  .
T Consensus       149 ~gktvgI----------iG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~--~----~~l~e----ll~--~  204 (333)
T PRK13243        149 YGKTIGI----------IG-FGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAE--Y----RPLEE----LLR--E  204 (333)
T ss_pred             CCCEEEE----------EC-cCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCE--e----cCHHH----HHh--h
Confidence            4678888          77 89999999999999999999998865432 22233331  1    12222    221  3


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+-|+....     + ...+..++++..++.++.
T Consensus       205 aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR  241 (333)
T PRK13243        205 SDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTAR  241 (333)
T ss_pred             CCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence            688888886422     1 345677888877776654

>PLN03139 formate dehydrogenase; Provisional

Probab=91.18  E-value=1.1  Score=41.89  Aligned_cols=89  Identities=16%  Similarity=0.147  Sum_probs=58.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|...++.++..|++|++.+++....+...+.+....     .++    .+...  .
T Consensus       198 ~gktVGI----------VG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l----~ell~--~  255 (386)
T PLN03139        198 EGKTVGT----------VG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----EDL----DAMLP--K  255 (386)
T ss_pred             CCCEEEE----------Ee-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CCH----HHHHh--h
Confidence            4667888          77 8999999999999999999998876543343444443221     122    22221  3


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+.+.+...     + ...+..|+++..+|.++.
T Consensus       256 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        256 CDVVVINTPLTEKTRGMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             CCEEEEeCCCCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence            688888776421     1 345777888777776654

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.11  E-value=2.1  Score=38.19  Aligned_cols=95  Identities=17%  Similarity=0.174  Sum_probs=64.9

Q ss_pred             CcchHHHHHHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          120 FPEVACTVWSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .|+........| +.-++ -.|.+++|          .|.+..+|.-+..++...++.|++.-.                
T Consensus       135 ~PcTp~avi~lL-~~~~i~l~Gk~vvV----------iGrS~iVGkPla~lL~~~~aTVtichs----------------  187 (287)
T PRK14173        135 EPCTPAGVVRLL-KHYGIPLAGKEVVV----------VGRSNIVGKPLAALLLREDATVTLAHS----------------  187 (287)
T ss_pred             CCCCHHHHHHHH-HHcCCCCCCCEEEE----------ECCCCccHHHHHHHHHHCCCEEEEeCC----------------
Confidence            444444444444 33333 46889999          999999999999999999998886542                


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                         ++.+.    .+.+  +..|+++-++|...+- --+.++++-.++.+|...
T Consensus       188 ---~T~~l----~~~~--~~ADIvIsAvGkp~~i-~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        188 ---KTQDL----PAVT--RRADVLVVAVGRPHLI-TPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             ---CCCCH----HHHH--hhCCEEEEecCCcCcc-CHHHcCCCCEEEEccCcc
Confidence               12222    2222  2489999999987643 356678888888888654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=91.09  E-value=0.63  Score=40.32  Aligned_cols=44  Identities=32%  Similarity=0.381  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      ..++.++||          .|++|.+|..+++.+...|++|++++++.+..+.+
T Consensus         9 ~~~~k~vlI----------tG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~   52 (247)
T PRK08945          9 LLKDRIILV----------TGAGDGIGREAALTYARHGATVILLGRTEEKLEAV   52 (247)
T ss_pred             ccCCCEEEE----------eCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence            457789999          99999999999998888899999999987654433

>PLN02686 cinnamoyl-CoA reductase

Probab=91.09  E-value=1.7  Score=40.47  Aligned_cols=45  Identities=18%  Similarity=0.152  Sum_probs=37.4

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      ...+.+|||          +||+|.+|..++..+...|++|+++.++.+..+.++
T Consensus        50 ~~~~k~VLV----------TGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~   94 (367)
T PLN02686         50 DAEARLVCV----------TGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR   94 (367)
T ss_pred             CCCCCEEEE----------ECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            355789999          999999999999999999999999888766554443

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=91.08  E-value=2.2  Score=37.93  Aligned_cols=96  Identities=17%  Similarity=0.215  Sum_probs=65.3

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +|+........|....---.|.+++|          .|.+..+|.-+..++...++.|++.-.                 
T Consensus       137 ~PcTp~avi~lL~~~~i~l~Gk~vvV----------vGrS~iVGkPla~lL~~~~atVtichs-----------------  189 (284)
T PRK14170        137 VPCTPAGIIELIKSTGTQIEGKRAVV----------IGRSNIVGKPVAQLLLNENATVTIAHS-----------------  189 (284)
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCCcchHHHHHHHHHCCCEEEEeCC-----------------
Confidence            45555555555533322346888999          999999999999999999998886542                 


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                        .+.++    .+.+  +..|+++-++|...+ ---+.++++..++.+|...
T Consensus       190 --~T~~l----~~~~--~~ADIvI~AvG~~~~-i~~~~vk~GavVIDvGin~  232 (284)
T PRK14170        190 --RTKDL----PQVA--KEADILVVATGLAKF-VKKDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             --CCCCH----HHHH--hhCCEEEEecCCcCc-cCHHHcCCCCEEEEccCcc
Confidence              12222    2222  247999999998764 2246678888888888653

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=91.02  E-value=2  Score=35.86  Aligned_cols=113  Identities=12%  Similarity=0.078  Sum_probs=71.6

Q ss_pred             CcchHHHHHHHHHHhcCC----------CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH
Q 019790          120 FPEVACTVWSTVFMTSHL----------SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV  189 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~----------~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~  189 (335)
                      +||........|.. -++          -.|.+++|          .|.+..+|.-+..++...|+.|++...+.-..  
T Consensus        33 ~PCTp~avi~lL~~-~~i~~~~~~~~~~l~GK~vvV----------IGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--   99 (197)
T cd01079          33 LPCTPLAIVKILEF-LGIYNKILPYGNRLYGKTITI----------INRSEVVGRPLAALLANDGARVYSVDINGIQV--   99 (197)
T ss_pred             cCCCHHHHHHHHHH-hCCcccccccCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEEecCcccc--
Confidence            45555555555533 333          56889999          99999999999999999999999875332111  


Q ss_pred             HHHcCCCEEEeC-CC--ccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          190 CKDLGADVCINY-KT--EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       190 ~~~~g~~~~~~~-~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ....+.   +.+ .+  .+....+.+.+  +..|+|+-++|...+.---+.++++-.++.+|..
T Consensus       100 ~~~~~~---~~hs~t~~~~~~~~l~~~~--~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         100 FTRGES---IRHEKHHVTDEEAMTLDCL--SQSDVVITGVPSPNYKVPTELLKDGAICINFASI  158 (197)
T ss_pred             cccccc---cccccccccchhhHHHHHh--hhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCC
Confidence            000000   111 11  12122244444  3589999999998753335778899888998854

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK14968 putative methyltransferase; Provisional

Probab=91.01  E-value=0.62  Score=38.44  Aligned_cols=41  Identities=27%  Similarity=0.324  Sum_probs=31.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      .++.++|.          .|  ++.|..+..+++. +.++++++.+++..+.++
T Consensus        22 ~~~~~vLd----------~G--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~   62 (188)
T PRK14968         22 KKGDRVLE----------VG--TGSGIVAIVAAKN-GKKVVGVDINPYAVECAK   62 (188)
T ss_pred             cCCCEEEE----------Ec--cccCHHHHHHHhh-cceEEEEECCHHHHHHHH
Confidence            67778888          66  5556677777776 899999999988776664

>PLN00015 protochlorophyllide reductase

Probab=90.99  E-value=1  Score=40.68  Aligned_cols=72  Identities=19%  Similarity=0.208  Sum_probs=46.3

Q ss_pred             ccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHH-HcC---CCE---EEeCCCcc-HHHHHHHHh-CCCcccEEEeC
Q 019790          156 HGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---ADV---CINYKTED-FVARVKEET-GGKGVDVILDC  225 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~-~~g---~~~---~~~~~~~~-~~~~~~~~~-~~~~~d~vid~  225 (335)
                      +|+++++|.++++.+...| ++|+++++++++.+.+. +++   ...   ..|-.+.. ....+.+.. ...++|++|++
T Consensus         3 TGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInn   82 (308)
T PLN00015          3 TGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCN   82 (308)
T ss_pred             eCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEEC
Confidence            8999999999998888889 89999999887665443 332   111   22433322 222222221 12368999998


Q ss_pred             CC
Q 019790          226 MG  227 (335)
Q Consensus       226 ~g  227 (335)
                      +|
T Consensus        83 AG   84 (308)
T PLN00015         83 AA   84 (308)
T ss_pred             CC
Confidence            86

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=90.99  E-value=0.92  Score=36.60  Aligned_cols=85  Identities=18%  Similarity=0.217  Sum_probs=53.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC------CEEEeCC---CccHHHHHHHHhCCCcccEEEeCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA------DVCINYK---TEDFVARVKEETGGKGVDVILDCM  226 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~------~~~~~~~---~~~~~~~~~~~~~~~~~d~vid~~  226 (335)
                      .| +|.+|.+++..+...|.+|....++++..+.+++...      +..+..+   +.+..+.    .  ++.|+++-++
T Consensus         5 iG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a----~--~~ad~Iiiav   77 (157)
T PF01210_consen    5 IG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEA----L--EDADIIIIAV   77 (157)
T ss_dssp             ES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHH----H--TT-SEEEE-S
T ss_pred             EC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHH----h--CcccEEEecc
Confidence            77 7999999999999999999999999988887765321      1111110   1223222    2  3589999999


Q ss_pred             ChhhHHHhhccccC---CCEEEEE
Q 019790          227 GASYFQRNLGSLNI---DGRLFII  247 (335)
Q Consensus       227 g~~~~~~~~~~l~~---~G~~v~~  247 (335)
                      .+......++.+++   .+..+..
T Consensus        78 Ps~~~~~~~~~l~~~l~~~~~ii~  101 (157)
T PF01210_consen   78 PSQAHREVLEQLAPYLKKGQIIIS  101 (157)
T ss_dssp             -GGGHHHHHHHHTTTSHTT-EEEE
T ss_pred             cHHHHHHHHHHHhhccCCCCEEEE
Confidence            98766555555444   3444443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=90.91  E-value=1.3  Score=40.12  Aligned_cols=38  Identities=18%  Similarity=0.245  Sum_probs=31.8

Q ss_pred             CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecChhhH
Q 019790          139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKL  187 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~~~~  187 (335)
                      .|.++||          +|+  +.++|.++++.+...|++|++ .++..++
T Consensus         8 ~gk~alI----------TGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFI----------AGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEE----------eCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            5788999          998  699999999999999999988 5554443

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=90.91  E-value=0.65  Score=40.26  Aligned_cols=101  Identities=21%  Similarity=0.273  Sum_probs=59.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC-E-EEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD-V-CINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~-~-~~~~~~~  204 (335)
                      +.....+|++||=          .+  ++.|..+..+++..+  .+|++++-++..++.+++    .+.. . .+..+..
T Consensus        41 ~~~~~~~g~~vLD----------v~--~GtG~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~  108 (233)
T PF01209_consen   41 KLLGLRPGDRVLD----------VA--CGTGDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAE  108 (233)
T ss_dssp             HHHT--S--EEEE----------ET---TTSHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTT
T ss_pred             hccCCCCCCEEEE----------eC--CChHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHH
Confidence            4456788888887          54  667788888888875  589999999998888764    2221 1 1222222


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEeccC
Q 019790          205 DFVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      ...      .....||.|.-+.|-       ..+.++.+.|+|||+++.+....
T Consensus       109 ~lp------~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~  156 (233)
T PF01209_consen  109 DLP------FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK  156 (233)
T ss_dssp             B--------S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred             Hhc------CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence            211      112469999876653       23578899999999998775544

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK01581 speE spermidine synthase; Validated

Probab=90.84  E-value=3  Score=38.53  Aligned_cols=96  Identities=17%  Similarity=0.136  Sum_probs=60.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcC-----------CCEEEeCCCcc
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG-----------ADVCINYKTED  205 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~  205 (335)
                      ....+||+          .|  |+.|.++..+++..+ .+|++++.+++..+.++.+.           ..++ .....+
T Consensus       149 ~~PkrVLI----------IG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi~D  215 (374)
T PRK01581        149 IDPKRVLI----------LG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHVCD  215 (374)
T ss_pred             CCCCEEEE----------EC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEECc
Confidence            33458999          87  456777788887654 58999999999888888521           0111 011122


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh------------hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMGA------------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~------------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ..+.+.+ . ...||+||--...            +.+..+.+.|+++|.++.-.
T Consensus       216 a~~fL~~-~-~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        216 AKEFLSS-P-SSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             HHHHHHh-c-CCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            2333333 2 3469999854321            12456788999999987764

>PRK06141 ornithine cyclodeaminase; Validated

Probab=90.83  E-value=3.1  Score=37.77  Aligned_cols=102  Identities=18%  Similarity=0.108  Sum_probs=61.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhh-CC-CeEEEEecChhhHHHHHH-c---CCCEEEeCCCccHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKD-L---GADVCINYKTEDFVARVK  211 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g-~~V~~~~~~~~~~~~~~~-~---g~~~~~~~~~~~~~~~~~  211 (335)
                      ....++++          +| +|.+|...+..+.. .+ .+|.+..|++++.+.+.+ +   +..... .  .+..+.+ 
T Consensus       123 ~~~~~v~i----------iG-~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~--~~~~~av-  187 (314)
T PRK06141        123 KDASRLLV----------VG-TGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V--TDLEAAV-  187 (314)
T ss_pred             CCCceEEE----------EC-CcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e--CCHHHHH-
Confidence            45667888          77 89999998864444 45 489999999888666543 3   322211 1  1122222 


Q ss_pred             HHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccCh
Q 019790          212 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI  259 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~  259 (335)
                           ...|+|+.|+++..--.-.+.++++-.+..+|.......+++.
T Consensus       188 -----~~aDIVi~aT~s~~pvl~~~~l~~g~~i~~ig~~~~~~~El~~  230 (314)
T PRK06141        188 -----RQADIISCATLSTEPLVRGEWLKPGTHLDLVGNFTPDMRECDD  230 (314)
T ss_pred             -----hcCCEEEEeeCCCCCEecHHHcCCCCEEEeeCCCCcccccCCH
Confidence                 2589999988875210112567777766667654443334444

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=90.80  E-value=3.1  Score=36.27  Aligned_cols=95  Identities=14%  Similarity=0.075  Sum_probs=59.2

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHh
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEET  214 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~  214 (335)
                      ...++.+||-          .| +|. |..+..+++ .|.+|++++.+++..+.+++... ...+..+...+      ..
T Consensus        39 ~~~~~~~vLD----------iG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~------~~   99 (251)
T PRK10258         39 PQRKFTHVLD----------AG-CGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESL------PL   99 (251)
T ss_pred             CccCCCeEEE----------ee-CCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccC------cC
Confidence            3345667777          76 343 665555554 58899999999998888876432 11221111110      01


Q ss_pred             CCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEec
Q 019790          215 GGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       215 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      ....||+|+....-       ..+.++.+.|+++|.++....
T Consensus       100 ~~~~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~  141 (251)
T PRK10258        100 ATATFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTL  141 (251)
T ss_pred             CCCcEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence            23469999875431       235678889999999987643

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=90.75  E-value=2.3  Score=41.11  Aligned_cols=70  Identities=11%  Similarity=0.241  Sum_probs=48.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .+.+++|          .| +|++|.+++..+...|++|++..++.++.+.+.+ ++.. .++..      .+.+   -.
T Consensus       331 ~~k~vlI----------iG-aGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~------~~~~---l~  389 (477)
T PRK09310        331 NNQHVAI----------VG-AGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE------SLPE---LH  389 (477)
T ss_pred             CCCEEEE----------Ec-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh------Hhcc---cC
Confidence            4667888          88 6999999999999999999999998877665543 3321 12111      1111   13


Q ss_pred             cccEEEeCCChh
Q 019790          218 GVDVILDCMGAS  229 (335)
Q Consensus       218 ~~d~vid~~g~~  229 (335)
                      .+|++++|++..
T Consensus       390 ~~DiVInatP~g  401 (477)
T PRK09310        390 RIDIIINCLPPS  401 (477)
T ss_pred             CCCEEEEcCCCC
Confidence            689999999764

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=90.70  E-value=3  Score=37.91  Aligned_cols=86  Identities=17%  Similarity=0.190  Sum_probs=59.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -.+.+|.|          +| .|.+|.+.++.++..|.+|++..+.....+.+...|.. +.     ++.+    ..  +
T Consensus        14 LkgKtVGI----------IG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~E----aa--k   70 (335)
T PRK13403         14 LQGKTVAV----------IG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----SVSE----AV--R   70 (335)
T ss_pred             hCcCEEEE----------Ee-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----CHHH----HH--h
Confidence            35678888          77 89999999999999999999987665555556666653 21     2222    22  2


Q ss_pred             cccEEEeCCChhh----H-HHhhccccCCCEEEE
Q 019790          218 GVDVILDCMGASY----F-QRNLGSLNIDGRLFI  246 (335)
Q Consensus       218 ~~d~vid~~g~~~----~-~~~~~~l~~~G~~v~  246 (335)
                      ..|+|+-+++.+.    + ...+..|+++..++.
T Consensus        71 ~ADVV~llLPd~~t~~V~~~eil~~MK~GaiL~f  104 (335)
T PRK13403         71 TAQVVQMLLPDEQQAHVYKAEVEENLREGQMLLF  104 (335)
T ss_pred             cCCEEEEeCCChHHHHHHHHHHHhcCCCCCEEEE
Confidence            4799999887532    2 345777887765543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=90.68  E-value=1.9  Score=40.12  Aligned_cols=79  Identities=19%  Similarity=0.173  Sum_probs=48.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHH--HHHHHhhCCCeEEEEecCh--hh--------------HHHHHHcCCC-EE
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSE--EK--------------LAVCKDLGAD-VC  198 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~--a~~~a~~~g~~V~~~~~~~--~~--------------~~~~~~~g~~-~~  198 (335)
                      ..+.++||          +|+++++|++  .++.+ ..|++++++....  .+              .+.+++.|.. ..
T Consensus        39 ~ggK~aLV----------TGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~  107 (398)
T PRK13656         39 NGPKKVLV----------IGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKS  107 (398)
T ss_pred             CCCCEEEE----------ECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEE
Confidence            34578999          9999999999  56666 7899988887322  11              2234455643 23


Q ss_pred             EeCCCcc------HHHHHHHHhCCCcccEEEeCCChh
Q 019790          199 INYKTED------FVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       199 ~~~~~~~------~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      ++.+-.+      +.+.+.+..  +++|+++.+++..
T Consensus       108 i~~DVss~E~v~~lie~I~e~~--G~IDiLVnSaA~~  142 (398)
T PRK13656        108 INGDAFSDEIKQKVIELIKQDL--GQVDLVVYSLASP  142 (398)
T ss_pred             EEcCCCCHHHHHHHHHHHHHhc--CCCCEEEECCccC
Confidence            3333221      233344433  3699999998865

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=90.65  E-value=1.5  Score=37.88  Aligned_cols=77  Identities=17%  Similarity=0.276  Sum_probs=45.8

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCE-EE--eCCC-ccHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKT-EDFVARVK  211 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~-~~~~~~~~  211 (335)
                      .++||          .|+++.+|..+++.+...|++|+++. +++++.+..    +..+... .+  |-.+ .++.+.+.
T Consensus         3 k~ilI----------tGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   72 (248)
T PRK06947          3 KVVLI----------TGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFD   72 (248)
T ss_pred             cEEEE----------eCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHH
Confidence            36889          99999999999999998999988765 444443322    2233222 22  2222 12222222


Q ss_pred             HHh-CCCcccEEEeCCC
Q 019790          212 EET-GGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~-~~~~~d~vid~~g  227 (335)
                      +.. ...++|++|.++|
T Consensus        73 ~~~~~~~~id~li~~ag   89 (248)
T PRK06947         73 AVQSAFGRLDALVNNAG   89 (248)
T ss_pred             HHHHhcCCCCEEEECCc
Confidence            211 1136899998886

>PLN02427 UDP-apiose/xylose synthase

Probab=90.65  E-value=1.6  Score=40.81  Aligned_cols=76  Identities=9%  Similarity=0.042  Sum_probs=48.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCC-----C-EEEeCCCccHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA-----D-VCINYKTEDFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~-----~-~~~~~~~~~~~~~~~  211 (335)
                      +..+|||          +||+|-+|..+++.+... |.+|++++++.++...+...+.     . ..+..+-.+ ...+.
T Consensus        13 ~~~~VlV----------TGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~   81 (386)
T PLN02427         13 KPLTICM----------IGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLE   81 (386)
T ss_pred             cCcEEEE----------ECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHH
Confidence            4457999          999999999999988887 5899999987655544432221     1 112111111 12344


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +...  ++|+||.+++
T Consensus        82 ~~~~--~~d~ViHlAa   95 (386)
T PLN02427         82 GLIK--MADLTINLAA   95 (386)
T ss_pred             HHhh--cCCEEEEccc
Confidence            4433  4899999885

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=90.62  E-value=0.37  Score=43.11  Aligned_cols=59  Identities=22%  Similarity=0.321  Sum_probs=38.0

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  221 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (335)
                      +|||          +|++|.+|.++...++..|.+|+.+.++              -+|-.+..   .+.+......+|+
T Consensus         2 riLI----------~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------~~dl~d~~---~~~~~~~~~~pd~   54 (286)
T PF04321_consen    2 RILI----------TGASGFLGSALARALKERGYEVIATSRS--------------DLDLTDPE---AVAKLLEAFKPDV   54 (286)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHTTTSEEEEEESTT--------------CS-TTSHH---HHHHHHHHH--SE
T ss_pred             EEEE----------ECCCCHHHHHHHHHHhhCCCEEEEeCch--------------hcCCCCHH---HHHHHHHHhCCCe
Confidence            6899          9999999999999999999999999765              12222222   2222222235899


Q ss_pred             EEeCCC
Q 019790          222 ILDCMG  227 (335)
Q Consensus       222 vid~~g  227 (335)
                      ||+|++
T Consensus        55 Vin~aa   60 (286)
T PF04321_consen   55 VINCAA   60 (286)
T ss_dssp             EEE---
T ss_pred             Eeccce
Confidence            999886

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.62  E-value=2.5  Score=37.52  Aligned_cols=96  Identities=14%  Similarity=0.159  Sum_probs=64.1

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      .|+.....+..|....---.|.+++|          .|.+..+|..+..++...|++|++..+..               
T Consensus       132 ~PcTp~av~~ll~~~~i~l~Gk~V~V----------iGrs~~vGrpla~lL~~~~atVtv~hs~t---------------  186 (279)
T PRK14178        132 APCTPNGIMTLLHEYKISIAGKRAVV----------VGRSIDVGRPMAALLLNADATVTICHSKT---------------  186 (279)
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCccccHHHHHHHHhCCCeeEEEecCh---------------
Confidence            44544445544533322246888988          89888999999999999999988876432               


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                              ..+.+.+  +.+|+++.++|...+-. -+.++++..++.+|...
T Consensus       187 --------~~L~~~~--~~ADIvI~Avgk~~lv~-~~~vk~GavVIDVgi~~  227 (279)
T PRK14178        187 --------ENLKAEL--RQADILVSAAGKAGFIT-PDMVKPGATVIDVGINQ  227 (279)
T ss_pred             --------hHHHHHH--hhCCEEEECCCcccccC-HHHcCCCcEEEEeeccc
Confidence                    1233333  25899999999654311 23368888889998653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=90.59  E-value=1.2  Score=36.44  Aligned_cols=79  Identities=19%  Similarity=0.176  Sum_probs=53.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccHHHHHHHHh-C
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVARVKEET-G  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~-~  215 (335)
                      .|..|++          .|+..++|...++-+...|++|+++.|+++.+..+-..-...+  +..+-..| +.+.+.+ .
T Consensus         6 aG~~vlv----------TgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~w-ea~~~~l~~   74 (245)
T KOG1207|consen    6 AGVIVLV----------TGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAW-EALFKLLVP   74 (245)
T ss_pred             cceEEEe----------ecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHH-HHHHHhhcc
Confidence            5677888          8888899999999999999999999999998877644332222  22222334 3344433 3


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                      -.+.|..++++|-
T Consensus        75 v~pidgLVNNAgv   87 (245)
T KOG1207|consen   75 VFPIDGLVNNAGV   87 (245)
T ss_pred             cCchhhhhccchh
Confidence            3456777777764

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=90.59  E-value=0.27  Score=43.68  Aligned_cols=64  Identities=23%  Similarity=0.206  Sum_probs=42.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +|++|-+|..+++.+...|++|++++|+...........   +.+.....    ..+..  .++|+||.|++.
T Consensus         4 tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~----~~~~~--~~~D~Vvh~a~~   67 (292)
T TIGR01777         4 TGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLA----ESEAL--EGADAVINLAGE   67 (292)
T ss_pred             EcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccc----hhhhc--CCCCEEEECCCC
Confidence            999999999999999889999999999876543322111   11111111    12222  368999998873

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=90.56  E-value=3  Score=37.01  Aligned_cols=96  Identities=19%  Similarity=0.225  Sum_probs=65.4

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      .||.....+..|....---.|.+++|          .|.+..+|.-+..++...|+.|++.-..                
T Consensus       138 ~PcTp~av~~lL~~~~i~l~Gk~vvV----------iGrS~~VGkPla~lL~~~~AtVt~chs~----------------  191 (278)
T PRK14172        138 LPCTPNSVITLIKSLNIDIEGKEVVV----------IGRSNIVGKPVAQLLLNENATVTICHSK----------------  191 (278)
T ss_pred             cCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCccchHHHHHHHHHCCCEEEEeCCC----------------
Confidence            45544445544533322247889999          9999999999999999999988776521                


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                         +.++    .+.+  +..|+++-++|...+- --+.++++-.++.+|...
T Consensus       192 ---T~~l----~~~~--~~ADIvIsAvGkp~~i-~~~~ik~gavVIDvGin~  233 (278)
T PRK14172        192 ---TKNL----KEVC--KKADILVVAIGRPKFI-DEEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             ---CCCH----HHHH--hhCCEEEEcCCCcCcc-CHHHcCCCcEEEEeeccc
Confidence               1222    2222  2489999999987652 245688888888988643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	335
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		8e-77
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		5e-64
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		7e-64
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		8e-41
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		5e-35
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		1e-32
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		7e-29
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		1e-28
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		2e-27
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		6e-25
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		2e-24
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-23
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-22
4eye_A	342	Crystal Structure Of A Probable Oxidoreductase From		1e-22
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		9e-22
2vz8_A	2512	Crystal Structure Of Mammalian Fatty Acid Synthase		8e-21
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		5e-20
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		2e-18
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		1e-17
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-17
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-17
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-17
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		4e-17
3slk_A	795	Structure Of Ketoreductase And Enoylreductase Didom		1e-16
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		1e-16
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-16
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		5e-15
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		8e-15
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		8e-15
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-14
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		3e-14
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		2e-13
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		2e-12
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		2e-12
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		2e-12
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-12
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		6e-12
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		2e-11
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		4e-11
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		4e-11
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		4e-11
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		6e-09
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		6e-09
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		6e-09
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		1e-08
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		1e-08
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-08
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		3e-08
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		3e-08
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		3e-08
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		3e-08
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		1e-07
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		2e-07
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		3e-07
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		3e-07
3nx4_A	324	Crystal Structure Of The Yhdh Oxidoreductase From S		4e-07
2y05_A	328	Crystal Structure Of Human Leukotriene B4 12-Hydrox		7e-07
3pi7_A	349	Crystal Structure Of A Putative Nadph:quinone Reduc		8e-07
1zsv_A	349	Crystal Structure Of Human Nadp-Dependent Leukotrie		9e-07
4b7c_A	336	Crystal Structure Of Hypothetical Protein Pa1648 Fr		1e-06
1v3t_A	333	Crystal Structure Of Leukotriene B4 12- Hydroxydehy		1e-06
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		2e-06
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		5e-06
1o89_A	345	Crystal Structure Of E. Coli K-12 Yhdh Length = 345		7e-06
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		7e-06
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		1e-04
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		9e-06
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		9e-06
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		9e-06
1xa0_A	328	Crystal Structure Of Mcsg Target Apc35536 From Baci		1e-05
2j3h_A	345	Crystal Structure Of Arabidopsis Thaliana Double Bo		4e-05
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		7e-05
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		9e-05
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		1e-04
3iup_A	379	Crystal Structure Of Putative Nadph:quinone Oxidore		2e-04
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		2e-04
1tt7_A	330	Crystal Structure Of Bacillus Subtilis Protein Yhfp		2e-04
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-04
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-04
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		5e-04
2zb3_A	353	Crystal Structure Of Mouse 15-Ketoprostaglandin Del		5e-04

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score =  283 bits (725), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 152/325 (46%), Positives = 200/325 (61%), Gaps = 12/325 (3%)
Query: 10  GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTI 69
           G P+V  + +   P   + EVL++ EA  +NR D  QR+GSYPPPK ASP  GLE SG I
Sbjct: 38  GGPDVXVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEI 97
Query: 70  LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129
           + VG  VS + VGD+VC L  GG YAE   +PAGQ+LP P G     AAA PE   TVW+
Sbjct: 98  VGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWA 157
Query: 130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 189
            +F  + L+ GES L          +HGG+SGIGT AIQ+ +  G  V+ TAGS  K   
Sbjct: 158 NLFQXAGLTEGESVL----------IHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEA 207
Query: 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 249
           C+ LGA   INY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL  DG L II  
Sbjct: 208 CERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDXIGAAYFERNIASLAKDGCLSIIAF 266
Query: 250 QGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 308
            GGA  E +N++ +  KRLTV  +  R R+ E K  I  ++   VWP +  G V PVI+K
Sbjct: 267 LGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHK 326
Query: 309 YLPLCEAAEAHQLMESSQHIGKIML 333
                + A+AH+L+E   H+GK+ L
Sbjct: 327 VFAFEDVADAHRLLEEGSHVGKVXL 351

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score =  241 bits (614), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 198/338 (58%), Gaps = 15/338 (4%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 23  MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82
Query: 61  PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
            PE     W T F   HL      + +  +  Y  +H G SG+GT AIQ+ +  G    V
Sbjct: 143 IPEA----WLTAFQLLHL------VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 192
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
           TAGS++KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct: 193 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 252
Query: 240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +DGR  + G  GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +
Sbjct: 253 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 312
Query: 299 V---GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
                ++ PV+ +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 313 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 350

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score =  240 bits (613), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 198/338 (58%), Gaps = 15/338 (4%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 7   MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 66
Query: 61  PGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 67  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 126
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
            PE     W T F   HL      + +  +  Y  +H G SG+GT AIQ+ +  G    V
Sbjct: 127 IPEA----WLTAFQLLHL------VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 176
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
           TAGS++KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct: 177 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 236
Query: 240 IDGRLFIIGTQGGAKTELNITS-LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +DGR  + G  GG      + S L  KR ++  + LRSR  + K ++V+   + + P  +
Sbjct: 237 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 296
Query: 299 V---GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
                ++ PV+ +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 297 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 334

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 173/360 (48%), Gaps = 47/360 (13%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G PEVL++ ++  P+    EV ++++A ALN  D   RKG   P       
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG---GGG 93
            G + SG + +VG  V  +  GD+V                          +LG    G 
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120
Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153
           YAE V +P   + P P  +S ++AAA P    T W  V     + PG+  LV        
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLV-------- 172
Query: 154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213
                 SG+   AIQ+ K  G RV  TAGSE+KL   K LGAD  +NY   D+   V+  
Sbjct: 173 --MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL 230
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
           TGGKG D ++D  GA YF+  + +    GR+ I G   G +  L    +F ++L++  + 
Sbjct: 231 TGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGST 290
Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           + S+S      I+  VE+        GK+KPV+ + LPL  AAE H+L+E  +  GK++L
Sbjct: 291 MASKSRLFP--ILRFVEE--------GKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVL 340

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score =  144 bits (364), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 173/338 (51%), Gaps = 21/338 (6%)
Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y   K   P
Sbjct: 30  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR-KPLLP 88
Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
           Y PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  
Sbjct: 89  YTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQG 148
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           AA      T +  +  ++ +  GES LV          HG S G+G  A Q+ +  G+++
Sbjct: 149 AAIGIPYFTAYRALIHSACVKAGESVLV----------HGASGGVGLAACQIARAYGLKI 198
Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             TAG+EE   +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 258
Query: 238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
           L+  GR+ ++G++G    E+N     AK  ++    L S + E       +    +   +
Sbjct: 259 LSHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSSTKEE----FQQYAAALQAGM 312
Query: 298 AVGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
            +G +KPVI    PL + AEAH+ ++  S   GK++L+
Sbjct: 313 EIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL 350

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 158/337 (46%), Gaps = 19/337 (5%)
Query: 4   IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL 63
           I   + G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP   S   G 
Sbjct: 5   IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGL-GT 63
Query: 64  ECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
           E +G +  VG  V   K GD+V  A    G Y+    + A +   +P+ +S + AAA   
Sbjct: 64  EAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL 123
Query: 123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182
              TV+  +  T  + P E FL           H  + G+G  A Q  K  G ++  T G
Sbjct: 124 KGLTVYYLLRKTYEIKPDEQFLF----------HAAAGGVGLIACQWAKALGAKLIGTVG 173
Query: 183 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 242
           + +K       GA   INY+ ED V R+KE TGGK V V+ D +G   ++R+L  L   G
Sbjct: 174 TAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRG 233
Query: 243 RLFIIGTQGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 301
            +   G   GA T +N+  L  K  L V    L+   T  + L  +E    ++  IA G 
Sbjct: 234 LMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEASNELFSLIASGV 291
Query: 302 VKPVI---YKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           +K  +    KY PL +A  AH+++ES    G  +L+P
Sbjct: 292 IKVDVAEQQKY-PLKDAQRAHEILESRATQGSSLLIP 327

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score =  124 bits (311), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 153/345 (44%), Gaps = 29/345 (8%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYPPPKGASPYP 61
           A VI + G P+    +EV+       +V ++  A  +N  DT  R G  +P   G  P  
Sbjct: 4   AAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIV 63
Query: 62  -GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA-- 117
            G E +  +  VG  V+ + VG++VC  L   G Y+++   PA +++ VP  + L D   
Sbjct: 64  VGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHL 123
Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
           A       T    +  T  + PG+  L+          H  + G+G   +   +  G  V
Sbjct: 124 AGLMLKGMTAQYLLHQTHKVKPGDYVLI----------HAAAGGMGHIMVPWARHLGATV 173
Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             T  +EEK    + LG    INY T+DF   V+E TGGKGVDV+ D +G    Q++L  
Sbjct: 174 IGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDC 233
Query: 238 LNIDGRLFIIGTQGGAKTELNIT-------SLFAKRLTVQAAGLRSRSTENKALIVSEVE 290
           L   G     G   G    + +        SLF  R  +    + +RS       + E  
Sbjct: 234 LRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHY-MSNRSE------IDEGS 286
Query: 291 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           K ++ A+  G +   + K  PL EAA AH+ M   Q IG I+L+P
Sbjct: 287 KCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 163/340 (47%), Gaps = 27/340 (7%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K I+I + G  +V++ ++   P I ++E+LIK + T +N  ++  RKG YP  K   PY 
Sbjct: 10  KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PYV 66
Query: 62  -GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVSLKDAAA 119
            G E SGT+++ GK V+ ++VGDQV A +    +A+   + + G V+ +P G S ++   
Sbjct: 67  LGREASGTVVAKGKGVTNFEVGDQV-AYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125
Query: 120 FPEVACTVWSTVFMTS---HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
           +      V + +  T+   H+  G+  L+             + G+G    Q+ K +G  
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLL----------FAAAGGVGLILNQLLKMKGAH 175
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
               A ++EKL + K+ GA+  IN   ED + +V + T GKGVD   D +G   F+ +L 
Sbjct: 176 TIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLA 235
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV---QAAGLRSRSTENKALIVSEVEKNV 293
           +L   G     G   G     +IT L  K +T+   Q  G  +   E K           
Sbjct: 236 ALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYY-----SDEF 290
Query: 294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +  +   K+   IYK  PL +   A   +ES + +GK++L
Sbjct: 291 FGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVL 330

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 154/335 (45%), Gaps = 13/335 (3%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K I  +  G PEVL+  + E        V+++ +A  LN  DT  R G YP P   S   
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGL- 61
Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           G E +G + +VG  V+R+KVGD+V    G  G Y+E   +P   ++ +   VS + AAA 
Sbjct: 62  GAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAAL 121
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
                TV   +  T  + PGE  L           H  + G+G+ A Q  K  G ++  T
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILF----------HAAAGGVGSLACQWAKALGAKLIGT 171
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             S EK A  K LGA   I+Y  ED   RV E T GK   V+ D +G   +  +L S+  
Sbjct: 172 VSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAP 231
Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
            G +   G   G  + +N+  + A++ +V        S  N A  +  +   ++  +A G
Sbjct: 232 RGLVVSFGNASGPVSGVNL-GILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASG 290
Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           K+K    +   L +AA+A   + + +  G  +L+P
Sbjct: 291 KLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 154/352 (43%), Gaps = 34/352 (9%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G    L+L     P+ +D E+ I+V+A  LN  D + R+G+   P      
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG ECSG + ++G +V  +++GD+V A +    +AE V  P   V  +P  +S  +AAAF
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQM-GKCQGVRVFV 179
           P    T +  +F  ++L  G S L          VH    G+G    Q+      V VF 
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVL----------VHSAGGGVGQAVAQLCSTVPNVTVFG 173
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
           TA + +  A+ KD  +   +  +  D+V  VK     +GVD++LDC+      + L  L 
Sbjct: 174 TASTFKHEAI-KD--SVTHLFDRNADYVQEVK-RISAEGVDIVLDCLCGDNTGKGLSLLK 229
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKA--------------- 283
             G   + G+      E      FAK    V+         ENK                
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGR 289
Query: 284 --LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             LI   VEK +       K+KPV+     L E  EA Q +    +IGK++L
Sbjct: 290 AGLIRGVVEKLI-GLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLIL 340

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 154/333 (46%), Gaps = 35/333 (10%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E  G +            G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59  PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           P    T +      +   PGE  LV   + +            T A+Q+ +  G+RV   
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALG----------TAAVQVARAMGLRVLAA 156
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLN 239
           A   EKLA+   LGA+    Y      A V E      G+D++L+  G    + +LG L 
Sbjct: 157 ASRPEKLALPLALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLA 209
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
             GRL  IG   G    +    L  + L V    L     E    +V E    + P +  
Sbjct: 210 HGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG- 266
Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 332
            +++PV+    P  EA  A + +    H GK++
Sbjct: 267 RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVV 299

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 50/337 (14%)
Query: 7   TQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECS 66
           T+  +P  L+L E   P+  + +++++  A +LN  D L  +            P  + S
Sbjct: 33  TETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXS 92
Query: 67  GTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAEKVAVPA 102
           G + +VGK+V+R++ GD+V +                      LGG   G  +E V +P 
Sbjct: 93  GVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPE 152
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI 162
           G  +  P  +   +A+  P    T W  +    HL  G+  +V            G+ G+
Sbjct: 153 GWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQ-----------GTGGV 201
Query: 163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 222
             F +Q+ K  G  V VT+ S EKL     LGAD  IN   ED+V RV   TG +G D I
Sbjct: 202 ALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261
Query: 223 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL-RSRSTEN 281
           L+  G +   ++L ++  DGR+ +IG   G +    +  L  K   VQ   +   R+ E+
Sbjct: 262 LEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALED 321
Query: 282 KALIVSEVEKNVWPAIAVGKVKPVI---YKYLPLCEA 315
              +V  V++          +KPVI   YK+  + EA
Sbjct: 322 ---LVGAVDRL--------GLKPVIDXRYKFTEVPEA 347

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 151/333 (45%), Gaps = 42/333 (12%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E  G +            G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59  PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           P    T +      +   PGE  LV   + +            T A+Q+ +  G+RV   
Sbjct: 108 PVSFLTAY-LALKRAQARPGEKVLVQAAAGALG----------TAAVQVARAMGLRVLAA 156
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLN 239
           A   EKLA+   LGA+    Y      A V E      G+D++L+  G    + +LG L 
Sbjct: 157 ASRPEKLALPLALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLA 209
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
             GRL  I           I  L   R  +   G        +  +V E    + P +  
Sbjct: 210 HGGRLVYIAP---------IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG- 259
Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 332
            +++PV+    P  EA  A + +    H GK++
Sbjct: 260 RELRPVVGPVFPFAEAEAAFRALLDRGHTGKVV 292

>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From Mycobacterium Abscessus Solved By Iodide Ion Sad Length = 342

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 149/336 (44%), Gaps = 16/336 (4%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI       PE L   +VE P    + V++ V+A  +   D L  KG Y   K   P+
Sbjct: 22  MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQL-KMEPPF 80
Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            PG+E +G + S  +  S  K GD+V A    GGYAE+VAV    +LP P  +   +A A
Sbjct: 81  VPGIETAGVVRSAPEG-SGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVA 139
Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
                 T++        L  GE+ LV   +              T AIQ+ K  G +V  
Sbjct: 140 LIANYHTMYFAYARRGQLRAGETVLVLGAAGGIG----------TAAIQIAKGMGAKVIA 189
Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
                      K +GAD+ +  + E +   V+E TGG GVD+++D +G   F   + +L 
Sbjct: 190 VVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLA 248
Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
            +GRL ++G   G    + +  L  +  ++             A  + E +  +   +A 
Sbjct: 249 SEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAW-GEFLRTHADYLYETQAGLEKLVAE 307
Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           G ++P +   +PL E  +A Q     +  GK++LVP
Sbjct: 308 G-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 39/341 (11%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPPPKGASPY 60
           KAI   Q G P+VL+L +   P+ + ++ LIKV A +LN  D   R GS +   K  +  
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCALLGGGG----YAEKVAVPAGQVLPVPSGVS 113
           P   G + SG ++ +G +V+   +GD+V  + G       YAE V      ++     +S
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCCYAEYVCASPDTIIQKLEKLS 127
Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
              AA+ P    T    +   + +  G+  L          +H G+ G+G  AIQ+ K +
Sbjct: 128 FLQAASLPTAGLTALQAL-NQAEVKQGDVVL----------IHAGAGGVGHLAIQLAKQK 176
Query: 174 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR 233
           G  V  TA S+   A  K LGA+ CINY  EDF+  +        VD ++D +G     +
Sbjct: 177 GTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTP-----VDAVIDLVGGDVGIQ 230
Query: 234 NLGSLNIDGRLFIIGT-QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292
           ++  L   G +  + T   G   E+      AK+   +A GL       K   + E+   
Sbjct: 231 SIDCLKETGCIVSVPTITAGRVIEV------AKQKHRRAFGLL------KQFNIEELHY- 277
Query: 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +   ++  K++  I +   L EA  AH+L+E+    GK++ 
Sbjct: 278 LGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 130/307 (42%), Gaps = 19/307 (6%)
Query: 31   LIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90
            L  V  T+LN  D +   G   P      +   +C   +   G++ S    G +V  ++ 
Sbjct: 1563 LCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDAS----GRRVMGMVP 1618
Query: 91   GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
              G A  V +       VPS  +L++AA+ P V  T + ++ +   + PGES L+     
Sbjct: 1619 AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI----- 1673
Query: 151  SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDF 206
                 H GS G+G  AI +   +G RVF T GS EK A  +     L      N +   F
Sbjct: 1674 -----HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSF 1728
Query: 207  VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 266
               V   T GKGVD++L+ +     Q ++  L   GR   IG    +       ++F K 
Sbjct: 1729 EQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKN 1788
Query: 267  LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 326
            +T     L S   E  A    EV + +   I  G V+P+     P  +   A + M   +
Sbjct: 1789 VTFHGILLDSLFEEGGA-TWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGK 1847
Query: 327  HIGKIML 333
            HIGK+++
Sbjct: 1848 HIGKVVI 1854

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 150/332 (45%), Gaps = 35/332 (10%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y          
Sbjct: 2   KAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLXRLGAY---------- 49
Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
            L         G  V     G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAFP
Sbjct: 50  -LTRLHPPFIPGXEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFP 108
Query: 122 EVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA 181
               T +      +   PGE  LV   + +            T A+Q+ +  G+RV   A
Sbjct: 109 VSFLTAY-LALKRAQARPGEKVLVQAAAGALG----------TAAVQVARAXGLRVLAAA 157
Query: 182 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGASYFQRNLGSLNI 240
              EKLA+   LGA+    Y      A V E      G+D++L+  G    + +LG L  
Sbjct: 158 SRPEKLALPLALGAEEAATY------AEVPERAKAWGGLDLVLEVRGKE-VEESLGLLAH 210
Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
            GRL  IG   G    +    L  + L V    L     E    +V E    + P +   
Sbjct: 211 GGRLVYIGAAEGEVAPIPPLRLXRRNLAVLGFWLTPLLREGA--LVEEALGFLLPRLG-R 267
Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIM 332
           +++PV+    P  EA  A + +    H GK++
Sbjct: 268 ELRPVVGPVFPFAEAEAAFRALLDRGHTGKVV 299

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP- 61
           A V+ +   P VL+  ++  PQ    +VL+++EA+  N  D   R G  P      P P 
Sbjct: 10  AAVVEEANGPFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP--HAQQPLPA 65
Query: 62  --GLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
             G + +GT+++VG  V  ++VGD V  L GG     G +A+  AV A  +   P+ ++ 
Sbjct: 66  ILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTX 125
Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG 174
           + A+  P V  T W  +   + +  G++ L+         V          AIQ+   +G
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHV----------AIQIALARG 175
Query: 175 VRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 227
            RVF TA   + L   +DLGA  +  + + ED+ A   E T G+G D++ D +G
Sbjct: 176 ARVFATARGSD-LEYVRDLGATPIDASREPEDYAA---EHTAGQGFDLVYDTLG 225

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 1   MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P    
Sbjct: 24  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83
Query: 58  SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
               G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +
Sbjct: 84  PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 140
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
                    T + ++     LS G+  LV             + G G FA+Q+ K     
Sbjct: 141 YLTLLVSGTTAYISLKELGGLSEGKKVLVT----------AAAGGTGQFAMQLSKKAKCH 190
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V  T  S+EK A  K LG D  INYKTE     +K+E   +GVDV+ + +G + F   + 
Sbjct: 191 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD 249
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
           +L   GRL +IG   G +T   ++ + A  L
Sbjct: 250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL 280

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 1   MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P    
Sbjct: 3   MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 62
Query: 58  SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
               G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +
Sbjct: 63  PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 119
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
                    T + ++     LS G+  LV             + G G FA+Q+ K     
Sbjct: 120 YLTLLVSGTTAYISLKELGGLSEGKKVLVT----------AAAGGTGQFAMQLSKKAKCH 169
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V  T  S+EK A  K LG D  INYKTE     +K+E   +GVDV+ + +G + F   + 
Sbjct: 170 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD 228
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
           +L   GRL +IG   G +T   ++ + A  L
Sbjct: 229 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL 259

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)
Query: 1   MKAIVITQ--PGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+  P   E + L ++   P   D ++L++     +N +D     G Y P    
Sbjct: 32  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 91
Query: 58  SPYPGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
               G E  G ++++G + S R+ VG Q  A +  G +AE   VPA    PVPS     +
Sbjct: 92  PFDIGFEGIGEVVALGLSASARYTVG-QAVAYMAPGSFAEYTVVPASIATPVPS--VKPE 148
Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
                    T + ++     LS G+  LV             + G G FA+Q+ K     
Sbjct: 149 YLTLLVSGTTAYISLKELGGLSEGKKVLVT----------AAAGGTGQFAMQLSKKAKCH 198
Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           V  T  S+EK A  K LG D  INYKTE     +K+E   +GVDV+ + +G + F   + 
Sbjct: 199 VIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD 257
Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
           +L   GRL +IG   G +T   ++ + A  L
Sbjct: 258 ALATKGRLIVIGFISGYQTPTGLSPVKAGTL 288

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 116/276 (42%), Gaps = 43/276 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
           PG E  G +  VG  V+  KVGD+V        C      L G                G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           GYAE     A  V+ +P  +S ++AA       T +  + +T    PGE   +       
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY------ 171
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
                G  G+G  A+Q  K  G+ V      +EKL + K+LGAD+ +N   ED    +KE
Sbjct: 172 -----GIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE 226
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           + GG    V+   +    FQ    S+   G   ++G
Sbjct: 227 KVGGVHAAVV-TAVSKPAFQSAYNSIRRGGACVLVG 261

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 43/276 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
           PG E  G +  VG  V+  KVGD+V        C      L G                G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           GYAE     A  V+ +P  +S ++AA       T +  + +T    PGE   +       
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIY------ 171
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
                G  G G  A+Q  K  G+ V      +EKL + K+LGAD+ +N   ED    +KE
Sbjct: 172 -----GIGGFGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE 226
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           + GG    V+   +    FQ    S+   G   ++G
Sbjct: 227 KVGGVHAAVV-TAVSKPAFQSAYNSIRRGGACVLVG 261

>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 114/246 (46%), Gaps = 23/246 (9%)
Query: 7   TQPGSPEVLQLQEVEDPQ----IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
           T+PGS + L L  V++P     + D EV I + A  +N  D L   G YP   G +   G
Sbjct: 216 TRPGSLDGLAL--VDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASL-G 269
Query: 63  LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
            E +G ++  G  V+    GD+V  ++    +          V  +P+G S   AA+ P 
Sbjct: 270 SEGAGVVVETGPGVTGLAPGDRVMGMIPKA-FGPLAVADHRMVTRIPAGWSFARAASVPI 328
Query: 123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182
           V  T +  +   + L PGES LV          H  + G+G  AIQ+ +  G  V+ TA 
Sbjct: 329 VFLTAYYALVDLAGLRPGESLLV----------HSAAGGVGMAAIQLARHLGAEVYATAS 378
Query: 183 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 242
            ++  AV  +L  +   + +T DF  +    TGG+GVDV+L+ +   +   +L  L   G
Sbjct: 379 EDKWQAV--ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGG 436
Query: 243 RLFIIG 248
           R   +G
Sbjct: 437 RFLELG 442

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 11/254 (4%)
Query: 2   KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           K I   + G+P +VLQ++      +KD+EV +++    +N +D +   G+Y         
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG E  G + +VG  VSR  +G +V  L G G + E V   A  V+P+P  +    AA  
Sbjct: 66  PGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM 125
Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
                T W T   T +L   +  LV+ C           S IG    Q+ +    R+   
Sbjct: 126 YINPLTAWVTCTETLNLQRNDVLLVNAC----------GSAIGHLFAQLSQILNFRLIAV 175
Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             + +       LGA   I+  T      V E T G G D  +D +G         SL  
Sbjct: 176 TRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRP 235
Query: 241 DGRLFIIGTQGGAK 254
           +G    IG   G +
Sbjct: 236 NGHFLTIGLLSGIQ 249

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 158/376 (42%), Gaps = 70/376 (18%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L+L+++  P+ K  +VLIK+EA  +  +D   R+G +   +     
Sbjct: 1   MRAMRLVEIGKP--LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
           G    G YAE V VP  + L     +S  +AA       T +  V   S L P ++ +V 
Sbjct: 119 GINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS-LDPSKTLVVI 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                     G   G+GT AIQ+ K   G  +      EE L   K  GAD  IN  ++D
Sbjct: 178 ----------GAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
            V+ ++  T GKG D ++D         +  +L+I    +++  QG    +  +  LF  
Sbjct: 228 PVSEIRRITQGKGADAVID------LNNSEKTLSI--YPYVLAKQG----KYVMVGLFGA 275
Query: 266 RLTVQAAGLRSRSTENKALIVSEVEKN------VWPAIAVGKVKPVIYKYLPLCEAAEAH 319
            L   A  +    T N+   +  +  N      +      GKVKP++ K + L EA EA 
Sbjct: 276 DLKYHAPLI----TLNEVQFIGSLVGNQSDFLGIMSLAEAGKVKPMVTKTMKLEEANEAI 331
Query: 320 QLMESSQHIGKIMLVP 335
             +E+ + +G+ +LVP
Sbjct: 332 DNLENFKAVGRQVLVP 347

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGT 164
           V+P+P  ++  +AA F     T W ++     LSPGE  L+          H  + G+G 
Sbjct: 4   VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLI----------HSATGGVGM 53
Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 224
            A+ + K  G R++ TAGS+ K  +   LG +   + ++ DF   + E T G GVDV+L+
Sbjct: 54  AAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLN 113
Query: 225 CMGASYFQRNLGSLNIDGRLFIIGTQ 250
            +     QR +  L   GR   +G +
Sbjct: 114 SLAGEAIQRGVQILAPGGRFIELGKK 139

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 152/384 (39%), Gaps = 85/384 (22%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQ----------------RKGSYPPPKGAS 58
           L+L EV  P++  DEVL+ V A+++N                      R+G +   +   
Sbjct: 50  LRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT-RHDQ 108
Query: 59  PYP--GLECSGTILSVGKNVSRWKVGDQVC----------------ALLGG--------- 91
           PY   G +CSG ++  G  V RWK GD V                  +LG          
Sbjct: 109 PYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFET 168
Query: 92  --GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVDF 147
             GG AE   V A Q+LP P+ ++ ++AA  P  A T +  +     + +  G+  L+  
Sbjct: 169 NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLI-- 226
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK----T 203
                    G S G+G++AIQ  K  G        S +K A  + LG D+ IN      T
Sbjct: 227 --------WGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 204 EDF-------------VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 250
           +D              +A++  E  G+  D++ +  G   F          G   I+  +
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTF----------GLSVIVARR 328
Query: 251 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL 310
           GG       +S +      +   ++ +          E ++        G V P +    
Sbjct: 329 GGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVY 388
Query: 311 PLCEAAEAHQLMESSQHIGKIMLV 334
           PL EAAEA +++++S+ +GK+ ++
Sbjct: 389 PLAEAAEACRVVQTSRQVGKVAVL 412

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 153/355 (43%), Gaps = 44/355 (12%)
Query: 1   MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           +KAI   QP       + +   ++ P+ K  E+L+K+++ ++N  DT QR         A
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK---A 59
Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSL 114
               G +  G + SVG  V+ +  GD V    +    G  AE   +    V   P  +S 
Sbjct: 60  PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISA 119
Query: 115 KDAAAFPEVACTVWSTVF------MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQ 168
           + A + P    T + T+F         + + G++ L+            G+ G+G+ A Q
Sbjct: 120 EQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLI----------INGAGGVGSIATQ 169
Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228
           + K  G+RV  TA   E +   K +GAD+ +N+K E  + + K + G + VD +      
Sbjct: 170 IAKAYGLRVITTASRNETIEWTKKMGADIVLNHK-ESLLNQFKTQ-GIELVDYVFCTFNT 227
Query: 229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR----------S 278
             +  ++  L +  R   I T    + + ++ +L  K L+     + +R           
Sbjct: 228 DMYYDDMIQL-VKPRGH-IATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKH 285
Query: 279 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
            E    I ++VE+N++       ++      L      +AHQ++ES+  IGK+++
Sbjct: 286 HEYLEDITNKVEQNIYQPTTTKVIEG-----LTTENIYQAHQILESNTMIGKLVI 335

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 145/348 (41%), Gaps = 51/348 (14%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
           L+ +++  P+ K +E+LI V+ + +   D     G +P P       G E +G ++ +G+
Sbjct: 18  LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGE 77
Query: 75  NVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVL 106
           NV  WK+GD              + C L          L G    G + +     A Q  
Sbjct: 78  NVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAA 137
Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFA 166
            +P G  L   A       TV+     +++L  G           +  + G + G+G+ A
Sbjct: 138 HIPQGTDLAQVAPILCAGITVYKA-LKSANLMAGH----------WVAISGAAGGLGSLA 186
Query: 167 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDC 225
           +Q  K  G RV    G E K  + + +G +V I++ K +D V  V + T G    VI   
Sbjct: 187 VQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246
Query: 226 MGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI 285
           +  +  + +   +  +G   ++G   GAK   ++ +   K +++  + + +R+   +AL 
Sbjct: 247 VSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREAL- 305
Query: 286 VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
                       A G VK  I K + L    E ++ ME  Q +G+ ++
Sbjct: 306 ---------DFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVV 343

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 148/372 (39%), Gaps = 64/372 (17%)
Query: 3   AIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGS---------- 50
           A VI + G  EVL+  Q +  P I   +EV++KV A ++N  D   R G           
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 51  --YPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPA 102
             +   KG   +P   G + SG ++  G +V  +K GD+V A +     G  +E V V  
Sbjct: 84  PLHVKIKGEE-FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSG 142
Query: 103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI 162
            +V   P  ++   AA+ P VA T WS +     L+         C+     + G S G+
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN------CTGKRVLILGASGGV 196
Query: 163 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 222
           GTFAIQ+ K     V     S++   + + LGAD  I+YK+     ++K     K  D I
Sbjct: 197 GTFAIQVMKAWDAHV-TAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSL---KPFDFI 252
Query: 223 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 282
           LD +G        GS       F+    G     L    L    L +   G+     +  
Sbjct: 253 LDNVG--------GSTETWAPDFLKKWSGATYVTLVTPFL----LNMDRLGIADGMLQTG 300
Query: 283 ALIVSEVEKNVWPAIA---------------------VGKVKPVIYKYLPLCEAAEAHQL 321
             + S+  K+ W  +                       GK++PVI +  P  +  EA   
Sbjct: 301 VTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLK 360
Query: 322 MESSQHIGKIML 333
           +E     GK ++
Sbjct: 361 VERGHARGKTVI 372

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 50/315 (15%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGAS 58
           MKA V+   G+P  L+++EV+ P     +VL+K+EA+ +   D    +G +P  PP    
Sbjct: 7   MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPL--- 61
Query: 59  PY-PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG-------------- 90
           P+ PG E  G + +VG  V+R K GD+V        C      L G              
Sbjct: 62  PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS 121
Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             GGYAE V      V  +P  V   + A       TV+  +  T+   PG+     + +
Sbjct: 122 VNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTN-ARPGQ-----WVA 175
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
           IS      G  G+G  A+Q  +  G+ V      + KL + + LGA + +N + ED V  
Sbjct: 176 IS------GIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEA 229
Query: 210 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 269
           ++ + GG    V++  +  S F + +G     G + ++G   G      I  +  K L +
Sbjct: 230 IQRDIGGAH-GVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHI 287
Query: 270 QAAGLRSRSTENKAL 284
             + + +R+   +AL
Sbjct: 288 AGSIVGTRADLQEAL 302

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 44/312 (14%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G+P  L + EV  PQ    +V +K+EA+ +   D     G +P        
Sbjct: 3   MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA-----LLG---------------GG 92
           PG E  G + +VG  VSR K GD+V        C      L G                G
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           GY E V      V  +P  V   + A       TV+  + +T    PG+  ++       
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTD-TRPGQWVVIS------ 173
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE 212
                G  G+G  A+Q  +  G+RV      + KL + + LGA+V +N +  D  A +++
Sbjct: 174 -----GIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQK 228
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA 272
           E GG    V++  +    F + +G +   G + + G   G      I  +  K +T++ +
Sbjct: 229 EIGGAH-GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG-DFGTPIFDVVLKGITIRGS 286
Query: 273 GLRSRSTENKAL 284
            + +RS   ++L
Sbjct: 287 IVGTRSDLQESL 298

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 146/383 (38%), Gaps = 89/383 (23%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKGSYPP--PKGASP 59
           + L EV  P++   E L+ V A+++N                 L+R G   P   +   P
Sbjct: 76  IHLDEVPVPELGPGEALVAVMASSVNYNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLP 135
Query: 60  YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
           Y   G + +G +L  G  V+ W+ GD+V A                              
Sbjct: 136 YHIIGSDLAGVVLRTGPGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETN 195
Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVDFC 148
            GG AE   V   Q++P P  ++ ++AAA   V  T +  +   +   +  G++ L+   
Sbjct: 196 FGGLAEIALVKTNQLMPKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLI--- 252
Query: 149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-----YK- 202
                   G S G+G++A Q     G        S +K  +C+ +GA+  I+     YK 
Sbjct: 253 -------WGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKF 305
Query: 203 -----TED------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251
                T+D      F  R++E TGG+ +D++ +  G   F  ++      G +    +  
Sbjct: 306 WKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTS 365
Query: 252 GAKTELNITSLFA--KRLT-VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 308
           G   E +   L+   KR+     A  R     N+              IA GK+ P + K
Sbjct: 366 GYMHEYDNRYLWMSLKRIIGSHFANYREAYEANR-------------LIAKGKIHPTLSK 412
Query: 309 YLPLCEAAEAHQLMESSQHIGKI 331
              L E  +A   +  + H GK+
Sbjct: 413 TYSLEETGQAAYDVHRNLHQGKV 435

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 153/374 (40%), Gaps = 66/374 (17%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
           G    G YAE V VP  + +     ++  +AA       T +  V   S L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                            T A+Q+ K   G  +      EE +   K  GAD  IN   +D
Sbjct: 178 GAGGGLG----------TMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGGAKTELNITS 261
            +A ++  T  KGVD ++D    +Y ++ L     +L   G+  ++G  G    +L+  +
Sbjct: 228 PLAEIRRITESKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA---DLHYHA 281
Query: 262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
                  +Q  G    +  +   I+   E         GKVKP+I K + L EA EA   
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDN 333
Query: 322 MESSQHIGKIMLVP 335
           +E+ + IG+ +L+P
Sbjct: 334 LENFKAIGRQVLIP 347

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 153/374 (40%), Gaps = 66/374 (17%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
           G    G YAE V VP  + +     ++  +AA       T +  V   S L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                            T A+Q+ K   G  +      EE +   K  GAD  IN   +D
Sbjct: 178 GAGGGLG----------TMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGASYFQRNLG----SLNIDGRLFIIGTQGGAKTELNITS 261
            +A ++  T  KGVD ++D    +Y ++ L     +L   G+  ++G  G    +L+  +
Sbjct: 228 PLAEIRRITESKGVDAVIDL---NYSEKTLSVYPKALAKQGKYVMVGLFGA---DLHYHA 281
Query: 262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
                  +Q  G    +  +   I+   E         GKVKP+I K + L EA EA   
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDN 333
Query: 322 MESSQHIGKIMLVP 335
           +E+ + IG+ +L+P
Sbjct: 334 LENFKAIGRQVLIP 347

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 131/313 (41%), Gaps = 44/313 (14%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G P  L + EV  PQ    ++ + ++A+ +   D    +G +P        
Sbjct: 26  MKAAVVRAFGKP--LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFI 83
Query: 61  PGLECSGTILSVGKNVSRWKVGDQV--------CA----LLGG----------------G 92
           PG E  G + +VG  V   K GD+V        C      LGG                G
Sbjct: 84  PGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGYSVNG 143
Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           G+AE V      V  +P  +   + A       TV+  + +T    PG     D+  IS 
Sbjct: 144 GFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTD-TKPG-----DWVVIS- 196
Query: 153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVK 211
                G  G+G  A+Q  +  G+ V      + KL + + LGA V +N KT  D  A ++
Sbjct: 197 -----GIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARRLGATVTVNAKTVADPAAYIR 251
Query: 212 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA 271
           +ET G    V++  +    F++ LG +   G + + G   G    L+I ++    +TV+ 
Sbjct: 252 KETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLNGLPPG-DFPLSIFNMVLNGVTVRG 310
Query: 272 AGLRSRSTENKAL 284
           + + +R    ++L
Sbjct: 311 SIVGTRLDLQESL 323

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 151/374 (40%), Gaps = 66/374 (17%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 61  P-------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------L 89
                   G E +G I  VG  V  +  GD V             C +           L
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118
Query: 90  G---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
           G    G YAE V VP  + +     ++  +AA       T +  V   S L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVV 177
Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                            T A+Q+ K   G  +      EE +   K  GAD  IN   +D
Sbjct: 178 GAGGGLG----------TMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227
Query: 206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS 261
            +A ++  T  KGVD ++D   +    S + + L      G+  ++G  G    +L+  +
Sbjct: 228 PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK---QGKYVMVGLFGA---DLHYHA 281
Query: 262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
                  +Q  G    +  +   I+   E         GKVKP+I K + L EA EA   
Sbjct: 282 PLITLSEIQFVGSLVGNQSDFLGIMRLAE--------AGKVKPMITKTMKLEEANEAIDN 333
Query: 322 MESSQHIGKIMLVP 335
           +E+ + IG+ +L+P
Sbjct: 334 LENFKAIGRQVLIP 347

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/385 (22%), Positives = 147/385 (38%), Gaps = 93/385 (24%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT-------------LQRKG--SYPPPKGASP 59
           + L +V  P++   E L+ V A+++N                 L+R G  S    +   P
Sbjct: 58  IHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLP 117
Query: 60  YP--GLECSGTILSVGKNVSRWKVGDQVCAL---------------------------LG 90
           Y   G + +G +L  G  V+ W+ GD+V A                              
Sbjct: 118 YHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETN 177
Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLSPGESFLVDFC 148
            GG AE   V + Q++P P  +S ++AAA   V  T +  +   +   +  G++ L    
Sbjct: 178 FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL---- 233
Query: 149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-------- 200
                 + G S G+G++A Q     G        S +K  +C+ +GA+  I+        
Sbjct: 234 ------IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRF 287
Query: 201 YKTED---------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 251
           +K E+         F  R++E TGG+ +D++ +  G   F          G    +  +G
Sbjct: 288 WKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETF----------GASVFVTRKG 337
Query: 252 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE--KNVWPA---IAVGKVKPVI 306
           G  T    TS +     +     R      K +I S     +  W A   IA G++ P +
Sbjct: 338 GTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTL 392
Query: 307 YKYLPLCEAAEAHQLMESSQHIGKI 331
            K   L +  +A   +  + H GK+
Sbjct: 393 SKVYSLEDTGQAAYDVHRNLHQGKV 417

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 30/249 (12%)
Query: 23  PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
           P +  D+V ++VEA A+N +DT  R G +  P     + G + +GT+++VG +V+  +VG
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTKMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83  DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT--VWSTVF 132
           D+V       C      G   +  V  G+V   +P G+S + AAA P    T  +   + 
Sbjct: 88  DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 192
                SP            Y  V+GGS+   T  +QM +  G  + +   S     + K 
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 249
            GA+   +Y+  +    ++  T    +   LDC+            N++   F    IG 
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 250 QGGAKTELN 258
            GG    LN
Sbjct: 255 AGGHYVSLN 263

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 30/249 (12%)
Query: 23  PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVG 82
           P +  D+V ++VEA A+N +DT  R G +  P     + G + +GT+++VG +V+  +VG
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTSMR-GQFATPWA---FLGTDYAGTVVAVGSDVTHIQVG 87
Query: 83  DQV-------CALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT--VWSTVF 132
           D+V       C      G   +  V  G+V   +P G+S + AAA P    T  +   + 
Sbjct: 88  DRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLL 147
Query: 133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 192
                SP            Y  V+GGS+   T  +QM +  G  + +   S     + K 
Sbjct: 148 GLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATCSPHNFDLAKS 206
Query: 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF---IIGT 249
            GA+   +Y+  +    ++  T    +   LDC+            N++   F    IG 
Sbjct: 207 RGAEEVFDYRAPNLAQTIRTYT-KNNLRYALDCI-----------TNVESTTFCFAAIGR 254
Query: 250 QGGAKTELN 258
            GG    LN
Sbjct: 255 AGGHYVSLN 263

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 1   MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA V+    +P+    L E E   IK +E L+ +E   +   D     G Y    G   
Sbjct: 1   MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNKAGT-- 56
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
             G E  G +  +G +VS  +VGD+V                      C  +   GY   
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95  ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
              AE+  V A   + VP G+   +A++      T +  +   S + PG+ + V F    
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGD-WQVIF---- 170
Query: 152 YSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
                 G+ G+G  AIQ  K   G +V     +++KL + K +GADV IN    + V  +
Sbjct: 171 ------GAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIINSGDVNPVDEI 224
Query: 211 KEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247
           K+ TGG GV   + C  A   F++ + SL   G++  +
Sbjct: 225 KKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAV 262

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 64
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 65  TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
             PA  +    P+G+++   A       T +  +     L+PG+ + +          +G
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 175
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
           G+S +G +A Q+GK         +      +E +A  K+LGA   I      +++F   +
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTI 235
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           KE   ++GG+   + L+C+G          LN +G +   G
Sbjct: 236 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 27  QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKT 86
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 87  TGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
             PA  +    P+G+++   A       T +  +     L+PG+ + +          +G
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 197
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
           G+S +G +A Q+GK         +      +E +A  K+LGA   I      +++F   +
Sbjct: 198 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSKEFGPTI 257
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           KE   ++GG+   + L+C+G          LN +G +   G
Sbjct: 258 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 297

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 44/281 (15%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 64
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 65  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
             PA  +    P+G+++   A       T +  +     L+PG+ + +          +G
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 175
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
           G+S +G +A Q+GK         +      +E +A  K+LGA   I      + +F   +
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI 235
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           KE   ++GG+   + L+C+G          LN +G +   G
Sbjct: 236 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 44/281 (15%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K 
Sbjct: 27  QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 86
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 87  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 146
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
             PA  +    P+G+++   A       T +  +     L+PG+ + +          +G
Sbjct: 147 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 197
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
           G+S +G +A Q+GK         +      +E +A  K+LGA   I      + +F   +
Sbjct: 198 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI 257
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           KE   ++GG+   + L+C+G          LN +G +   G
Sbjct: 258 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 297

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 1   MKAIVITQPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           MKA V+    +P+    L E E   IK +E L+ +E   +   D     G +    G   
Sbjct: 1   MKAAVVRH--NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGT-- 56
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY--- 94
             G E  G +  +G +VS  +VGD+V                      C  +   GY   
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVD 116
Query: 95  ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
              AE+  V A   + VP G+   +A++      T +  +   S + PG+ + V F    
Sbjct: 117 GGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGD-WQVIF---- 170
Query: 152 YSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
                 G+ G+G  AIQ  K   G +V     +++KL + K +GADV IN    + V  +
Sbjct: 171 ------GAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEI 224
Query: 211 KEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 247
           K+ TGG GV   + C  A   F++ + SL   G++  +
Sbjct: 225 KKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAV 262

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y        
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
             G E    +++VG NV+  K GD V     G G     AV + + L  VPS + L+ AA
Sbjct: 87  VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
                 CT +  +     L PG+S + +            +SG+G   IQ+    G+R  
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQN----------ASNSGVGQAVIQIAAALGLRTI 196
Query: 179 VTAGSE---EKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYF 231
                    +KL+   K LGA+  I   TE+ + R + +   K +    + L+C+G    
Sbjct: 197 NVVRDRPDIQKLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSS 253
Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
              L  L   G +   G         +++ L  K L ++
Sbjct: 254 TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLR 292

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 154/370 (41%), Gaps = 70/370 (18%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPPKG 56
           AI  T+PG     +L EV+ P+    EVLIKV AT++   D          +    PP+ 
Sbjct: 6   AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ- 62
Query: 57  ASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG-- 90
                G E +G ++ +G  V   +VGD                      VC    + G  
Sbjct: 63  ---IXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 119
Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             G +AE   VPA  +   P  +   + A   E       TV +   +S G+S L+    
Sbjct: 120 TDGVFAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLIT--- 173
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208
                   G+  +G   I + K  G   V V+  S+ +  + K +GAD  IN   ED V 
Sbjct: 174 --------GAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVK 225
Query: 209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKR 266
            V + T G GVDV L+  GA    ++ L ++   GR+ ++G   G  T + N   +F K 
Sbjct: 226 EVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KA 284
Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLME 323
           LT+   G+  R        VS + ++       GK+   P+I +KY    +  EA +L  
Sbjct: 285 LTIY--GITGRHLWETWYTVSRLLQS-------GKLNLDPIITHKYKGFDKYEEAFELXR 335
Query: 324 SSQHIGKIML 333
           + +  GK++ 
Sbjct: 336 AGK-TGKVVF 344

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 154/370 (41%), Gaps = 70/370 (18%)
Query: 3   AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPPKG 56
           AI  T+PG     +L EV+ P+    EVLIKV AT++   D          +    PP+ 
Sbjct: 7   AIXKTKPGYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQ- 63
Query: 57  ASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG-- 90
                G E +G ++ +G  V   +VGD                      VC    + G  
Sbjct: 64  ---IXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD 120
Query: 91  -GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
             G +AE   VPA  +   P  +   + A   E       TV +   +S G+S L+    
Sbjct: 121 TDGVFAEYAVVPAQNIWKNPKSIP-PEYATLQEPLGNAVDTV-LAGPIS-GKSVLIT--- 174
Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 208
                   G+  +G   I + K  G   V V+  S+ +  + K +GAD  IN   ED V 
Sbjct: 175 --------GAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVK 226
Query: 209 RVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKR 266
            V + T G GVDV L+  GA    ++ L ++   GR+ ++G   G  T + N   +F K 
Sbjct: 227 EVXDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIF-KA 285
Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQLME 323
           LT+   G+  R        VS + ++       GK+   P+I +KY    +  EA +L  
Sbjct: 286 LTIY--GITGRHLWETWYTVSRLLQS-------GKLNLDPIITHKYKGFDKYEEAFELXR 336
Query: 324 SSQHIGKIML 333
           + +  GK++ 
Sbjct: 337 AGK-TGKVVF 345

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 22/279 (7%)
Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y        
Sbjct: 14  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 73
Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL-PVPSGVSLKDAA 118
             G E    +++VG NV+  K GD V     G G     AV + + L  VPS + L+ AA
Sbjct: 74  VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 133
Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
                 CT +  +     L PG+S + +            +SG+G   IQ+    G+R  
Sbjct: 134 TLGVNPCTAYRMLMDFEQLQPGDSVIQN----------ASNSGVGQAVIQIAAALGLRTI 183
Query: 179 VTAGSE---EKLA-VCKDLGADVCINYKTEDFVARVKEETGGKGV---DVILDCMGASYF 231
                    +KL+   K LGA+  I   TE+ + R + +   K +    + L+C+G    
Sbjct: 184 NVVRDRPDIQKLSDRLKSLGAEHVI---TEEELRRPEMKNFFKDMPQPRLALNCVGGKSS 240
Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
              L  L   G +   G         +++ L  K L ++
Sbjct: 241 TELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLR 279

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 44/281 (15%)
Query: 2   KAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKG 56
           +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G  P  P K 
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKT 64
Query: 57  A---SPYPGLECSG----TILSVGKNVSRWKVGDQV-----------CALLGGGGYAEKV 98
               +  P   C       ++ VG NVS  + GD V              LG      K+
Sbjct: 65  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL 124
Query: 99  AVPA-GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG 157
             PA  +    P+G+++   A       T +  +     L+PG+ + +          +G
Sbjct: 125 PNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ---------NG 175
Query: 158 GSSGIGTFAIQMGKCQGVR----VFVTAGSEEKLAVCKDLGADVCI---NYKTEDFVARV 210
           G+S +G +A Q+GK         +      +E +A  K+LGA   I      + +F   +
Sbjct: 176 GTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTI 235
Query: 211 KE---ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           KE   ++GG+   + L+C+G          LN +G +   G
Sbjct: 236 KEWIKQSGGE-AKLALNCVGGKSSTGIARKLNNNGLMLTYG 275

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 145/373 (38%), Gaps = 66/373 (17%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +      
Sbjct: 2   RAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLG 59
Query: 62  -------GLECSGTILSVGKNVSRWKVGDQV-------------CAL-----------LG 90
                  G E +G I  VG  V  +  GD V             C +           LG
Sbjct: 60  VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
               G YAE V VP  +       ++  +AA       T +  V   S L P ++ LV  
Sbjct: 120 INFDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVG 178
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
                           T A+Q+ K   G  +      EE +   K  GAD  IN   +D 
Sbjct: 179 AGGGLG----------TXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDP 228
Query: 207 VARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL 262
           +A ++  T  KGVD ++D   +    S + + L      G+   +G  G    +L+  + 
Sbjct: 229 LAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK---QGKYVXVGLFG---ADLHYHAP 282
Query: 263 FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 322
                 +Q  G    +  +   I    E         GKVKP I K   L EA EA   +
Sbjct: 283 LITLSEIQFVGSLVGNQSDFLGIXRLAE--------AGKVKPXITKTXKLEEANEAIDNL 334
Query: 323 ESSQHIGKIMLVP 335
           E+ + IG+ +L+P
Sbjct: 335 ENFKAIGRQVLIP 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 150/374 (40%), Gaps = 70/374 (18%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
           M+AI+ T+P      +L EV+ P+    EVLIKV AT++   D          +    PP
Sbjct: 5   MQAIMKTKPAYGA--ELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62
Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGD---------------------QVC---ALLG 90
           +      G E +G ++ VG  V   +VGD                      VC    + G
Sbjct: 63  Q----IMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFG 118
Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
               G +A    VPA      P  +   + AA  E       TV        G S L+  
Sbjct: 119 VDMDGVFAHYAIVPAKNAWKNPKDMP-PEYAALQEPLGNAVDTVLAGP--IAGRSTLIT- 174
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
                     G+  +G   I + K  G   V V+  SE +  + K +GAD  +N   ED 
Sbjct: 175 ----------GAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEEDP 224
Query: 207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFA 264
           V  V + T G GV+V L+  GA    ++ L ++   GR+ ++G      T + N   +F 
Sbjct: 225 VKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPREVTIDFNNLIIF- 283
Query: 265 KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVI-YKYLPLCEAAEAHQL 321
           K L V   G+  R        VS +       I  GK+   P+I +KY    +  EA +L
Sbjct: 284 KALEVH--GITGRHLWETWYTVSSL-------IQSGKLNLDPIITHKYKGFDKFEEAFEL 334
Query: 322 MESSQHIGKIMLVP 335
           M + +  GK++  P
Sbjct: 335 MRAGK-TGKVVFFP 347

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 19  EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-PYPGLECSGTILSVGKNVS 77
           E+  P     ++L++V+A ++N  D   R+ +  PP G      G + +G + +VG +V+
Sbjct: 44  ELPKPAPAGHDILVEVKAVSVNPVDYKVRRST--PPDGTDWKVIGYDAAGIVSAVGPDVT 101
Query: 78  RWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT 134
            ++ GD+V    +++  G  AE   V    V   P  +   +AAA P  + T W   F  
Sbjct: 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDR 161
Query: 135 SHLS---PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVC 190
             ++   PG +  +           GG+ G+G+ A+Q+ + +  + V  TA   E     
Sbjct: 162 LDVNKPVPGAAPAILIV--------GGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV 213
Query: 191 KDLGADVCINY 201
           K LGA   I++
Sbjct: 214 KSLGAHHVIDH 224

>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From Salmonella Enterica In Complex With Nadp Length = 324

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 115/283 (40%), Gaps = 35/283 (12%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +A+++ Q     +  +Q +E+ Q+   +V + V  ++LN  D L   G     +     P
Sbjct: 2   QALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPXIP 61
Query: 62  GLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV 112
           G++ +GT+          G+ V  + W VG+        GG AE+  V    ++ +P+G+
Sbjct: 62  GIDFAGTVHASEDPRFHAGQEVLLTGWGVGENHW-----GGLAERARVKGDWLVALPAGL 116
Query: 113 SLKDA-----AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAI 167
           S ++A     A F    C         + + P +  +V         V G S G+G+ A+
Sbjct: 117 SSRNAXIIGTAGFTAXLCV---XALEDAGIRPQDGEVV---------VTGASGGVGSTAV 164
Query: 168 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227
            +    G +V   +G E      K LGA+  ++ + E   +R  E+    G    +D +G
Sbjct: 165 ALLHKLGYQVAAVSGRESTHGYLKSLGANRILS-RDEFAESRPLEKQLWAGA---IDTVG 220
Query: 228 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
                + L   N  G +   G  GG      +     + + +Q
Sbjct: 221 DKVLAKVLAQXNYGGCVAACGLAGGFALPTTVXPFILRNVRLQ 263

>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
           L++ C +   +   V+  +  +G+   Q+ K +G +V    GS+EK+A  + LG DV  N
Sbjct: 132 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFN 191
Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           YKT + +    ++    G D   D +G  +    +G +   GR+ I G
Sbjct: 192 YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 239

>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase (Mll3093) From Mesorhizobium Loti At 1.71 A Resolution Length = 349

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 29  EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKN-VSRWKVGDQVC- 86
           +VLIKV   ++N +D    KG Y  P+      G E  GTI++ G    ++  VG +V  
Sbjct: 51  QVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAF 110
Query: 87  --ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGE 141
              L   G +AE     A   +P+   V  +D AA    P  A   +  V        GE
Sbjct: 111 ATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAXIVNPLTAIAXFDIVKQE-----GE 165
Query: 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY 201
              V            G+S +    I + K +G R  VT   +E++A+ KD+GA   +N 
Sbjct: 166 KAFV---------XTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNE 216
Query: 202 KTEDFVARVKEETGGKGVDVILDCM 226
           K  DF A ++E    +   + LD +
Sbjct: 217 KAPDFEATLREVXKAEQPRIFLDAV 241

>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
           L++ C +   +   V+  +  +G+   Q+ K +G +V    GS+EK+A  + LG DV  N
Sbjct: 153 LLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFN 212
Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           YKT + +    ++    G D   D +G  +    +G +   GR+ I G
Sbjct: 213 YKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICG 260

>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 21/236 (8%)
Query: 20  VEDP--QIKDDEVLIKVEATALNRA--DTLQRKGSYPPPKGASPYPGLECSGTILSVGKN 75
           VE P  +  + ++L+K E  +L+ A    +    SY PP G          G +L V K+
Sbjct: 29  VETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVL-VSKH 87
Query: 76  VSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSL-KDAAAFPEVACTVWSTVFMT 134
              ++ GD V   LG   Y   +  P G     PS   L +  +A      T +  +   
Sbjct: 88  PG-FQAGDYVNGALGVQDYF--IGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDV 144
Query: 135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDL 193
                GE+ ++           G +  +G+ A Q+ + +G RV   AG  EK   + ++L
Sbjct: 145 GQPKNGETVVI----------SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL 194
Query: 194 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 249
           G D  I+YK ED  A +K E   KG+DV  D +G       L  +    R+ + G 
Sbjct: 195 GFDGAIDYKNEDLAAGLKREC-PKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGA 249

>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 144 LVDFCSISYSD---VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN 200
           L++ C +   +   V   +  +G+   Q+ K +G +V   AGS+EK+A  K +G D   N
Sbjct: 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFN 196
Query: 201 YKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
           YKT + +    ++    G D   D +G  +    L  +   G++ I G
Sbjct: 197 YKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG 244

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 128/329 (38%), Gaps = 67/329 (20%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+  T+ GS  V+   ++  P     E+L+KV A  L  +D        P  + A   
Sbjct: 1   MKAVQYTEIGSEPVVV--DIPTPTPGPGEILLKVTAAGLCHSDIFVMD--MPAAQYAYGL 56
Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E  GT+  +G+ V+ + VGD V             CA                 
Sbjct: 57  PLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP 116
Query: 88  --LLGGGGYAE-------KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
             L   G  AE       +  VP G + PV +   L DA   P  A +      +   L 
Sbjct: 117 PGLGSPGSMAEYMIVDSARHLVPIGDLDPV-AAAPLTDAGLTPYHAIS-----RVLPLLG 170
Query: 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADV 197
           PG + +V            G  G+G   IQ+ +     RV      +++LA+ +++GAD 
Sbjct: 171 PGSTAVVI-----------GVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADA 219
Query: 198 CINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTE 256
            +        A ++E TGG+G   + D +GA S        + +DG + ++G   GA  +
Sbjct: 220 AVKSGAGAADA-IRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAK 278
Query: 257 LNITSL-FAKRLTVQAAGLRSRSTENKAL 284
           +    + F   +     G RS   E  AL
Sbjct: 279 VGFFMIPFGASVVTPYWGTRSELMEVVAL 307

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 148/377 (39%), Gaps = 78/377 (20%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRAD------TLQRKGSYPPP 54
           M+A+    P   E L L +   P+    E+L++VEA ++   D          +G   PP
Sbjct: 1   MRALAKLAP--EEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58
Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQV------------------------CALLG 90
                  G E SG + +VG  V R +VGD V                          +LG
Sbjct: 59  L----VTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILG 114
Query: 91  ---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDF 147
               GG+AE V VPA      P  +  + AA        V  TV+  S +S G+S L+  
Sbjct: 115 VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAV-HTVYAGSGVS-GKSVLIT- 171
Query: 148 CSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF 206
                     G+  IG  A  + +  G   + V+  +  +LA  +   AD  +N   ED 
Sbjct: 172 ----------GAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDL 220
Query: 207 VARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
           +  V+  T G GV+V+L+  G  +   + L +L   G   I+G         ++      
Sbjct: 221 LEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-PIRFDLAGELVM 278
Query: 266 RLTVQAAGLRSRS-----TENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEA 318
           R  + A G+  R       +  AL+ S            G+V   P++   LPL    EA
Sbjct: 279 R-GITAFGIAGRRLWQTWMQGTALVYS------------GRVDLSPLLTHRLPLSRYREA 325
Query: 319 HQLMESSQHIGKIMLVP 335
             L+ S Q + K++L P
Sbjct: 326 FGLLASGQAV-KVILDP 341

>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 115/284 (40%), Gaps = 35/284 (12%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           ++A+++ Q     +  +Q +++ ++ + +V + V  ++LN  D L   G     +     
Sbjct: 22  LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 81
Query: 61  PGLECSGTI-------LSVGKNV--SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111
           PG++ +GT+          G+ V  + W VG+        GG AE+  V    ++ +P G
Sbjct: 82  PGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHW-----GGLAEQARVKGDWLVAMPQG 136
Query: 112 VSLKDA-----AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFA 166
           +  + A     A F  + C +       + + P +  +V         V G S G+G+ A
Sbjct: 137 LDARKAMIIGTAGFTAMLCVM---ALEDAGVRPQDGEIV---------VTGASGGVGSTA 184
Query: 167 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 226
           + +    G +V   +G E      K LGA   +  + E   +R  E+    G    +D +
Sbjct: 185 VALLHKLGYQVVAVSGRESTHEYLKSLGASRVLP-RDEFAESRPLEKQVWAGA---IDTV 240
Query: 227 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           G     + L  +N  G +   G  GG      +     + + +Q
Sbjct: 241 GDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQ 284

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
           +LQ ++  Q + DEVL+KV AT +   D + R   YP P  A    G E SG I ++G 
Sbjct: 19 FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPA--VLGHEGSGIIEAIGP 76
Query: 75 NVSRWKVGDQV 85
          NV+  +VGD V
Sbjct: 77 NVTELQVGDHV 87

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 158 GSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 216
           G+  +G  A+   K  G  + +     E +L + K LGA   IN KT+D VA +KE T G
Sbjct: 198 GAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDG 257
Query: 217 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGT-QGGAKTELNITSLF 263
            GV+  L+  G+    ++ + +L I G++ ++G  Q G   + ++  L 
Sbjct: 258 -GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLL 305

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 8   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G E +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 64  LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
           P G S               + F E       +V     L+P +   +  C IS      
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
              + +  GS        G+G   I   K  G  R+     +++K A  K+ GA  CIN 
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 241
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
             +DF   ++E   E    GVD   +C+G     R
Sbjct: 242 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 9   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G E +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 65  LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
           P G S               + F E       +V     L+P +   +  C IS      
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
              + +  GS        G+G   I   K  G  R+     +++K A  K+ GA  CIN 
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 242
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
             +DF   ++E   E    GVD   +C+G     R
Sbjct: 243 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 109/275 (39%), Gaps = 50/275 (18%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 9   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 64
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G E +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 65  LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 123
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
           P G S               + F E       +V     L+P +   +  C IS      
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
              + +  GS        G+G   I   K  G  R+     +++K A  K+ GA  CIN 
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 242
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
             +DF   ++E   E    GVD   +C+G     R
Sbjct: 243 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 276

>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GAS 58
            +A V+ +  +     +Q +    + + +VL++V  +++N  D L    S P  K     
Sbjct: 4   FQAFVVNKTETEFTAGVQTISXDDLPEGDVLVRVHYSSVNYKDGL---ASIPDGKIVKTX 60
Query: 59  PY-PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSG 111
           P+ PG++ +G ++S      R++ GD+V A      +   GGY+E   +    ++P+P G
Sbjct: 61  PFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKG 118
Query: 112 VSLKDAAAFPEVACTVWSTVF-MTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQM 169
           ++LK+A A      T   ++  +  H L+P    ++         V G + G+G+ A+  
Sbjct: 119 LTLKEAXAIGTAGFTAALSIHRLEEHGLTPERGPVL---------VTGATGGVGSLAVSX 169
Query: 170 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
              +G  V  + G   +    + LGA   +    ED  A        +     +D +G  
Sbjct: 170 LAKRGYTVEASTGKAAEHDYLRVLGAKEVL--AREDVXAERIRPLDKQRWAAAVDPVGGR 227
Query: 230 YFQRNLGSLNIDGRLFIIGTQGGAK 254
                L      G + + G  GGA+
Sbjct: 228 TLATVLSRXRYGGAVAVSGLTGGAE 252

>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 11/186 (5%)
Query: 155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEE 213
           V   S  +G    Q+ K  G  V  +AGS+EK+ + K   G D   NYK E  +    + 
Sbjct: 161 VSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKR 220
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTE-----LNITSLFAKRLT 268
               G+D+  + +G       L ++N+ GR+ + G       E      N++++  KR  
Sbjct: 221 CFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNR 280
Query: 269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 328
           +Q  G       +K    S+  + V P I  GK+  V      L +A EA   +   +++
Sbjct: 281 IQ--GFVVSDFYDK---YSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNV 335
Query: 329 GKIMLV 334
           GK ++V
Sbjct: 336 GKQVVV 341

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 108/275 (39%), Gaps = 50/275 (18%)
Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-Y 60
           KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+   P+G  P  
Sbjct: 8   KAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA--DPEGCFPVI 63
Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALL------------GGGGYAEKVAVPAGQVLPV 108
            G   +G + SVG+ V++ K GD V  L                   +K+ V  G+ L +
Sbjct: 64  LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL-M 122
Query: 109 PSGVS-----------LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS------ 151
           P G S               + F E       +V     L+P +   +  C IS      
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 152 --YSDVHGGS-------SGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 201
              + +  GS        G+G   I   K  G  R+     +++K A  K+ GA  CIN 
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN- 241
Query: 202 KTEDFVARVKE---ETGGKGVDVILDCMGASYFQR 233
             +DF   ++E   E    GVD   +C+G     R
Sbjct: 242 -PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMR 275

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 58/263 (22%)
Query: 12  PEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGS------YPPPKGASPYPGLE 64
           PEV +++EV +P+I K  E++IKV+A  +  +D    +        YP   G     G E
Sbjct: 40  PEV-RVEEVPEPRIEKPTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHE 98
Query: 65  CSGTILSVG------KNVSRWKVGDQVCA---LLGG------------------------ 91
            SG ++  G      +   R+++G+ VCA   L  G                        
Sbjct: 99  FSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVD 158
Query: 92  GGYAEKVAVPAG------QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH-LSPGESFL 144
           G +AE V V A       ++  V  G  L  A +  E     ++ V +    + PG++ +
Sbjct: 159 GAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVV 218
Query: 145 VDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 204
           +         + GG  G+   AI +      +V ++  SE +  + K+LGAD  I+   E
Sbjct: 219 I---------LGGGPIGLAAVAI-LKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKE 268
Query: 205 DFVARVKEETGGKGVDVILDCMG 227
           +FV  V + T G G  + L+  G
Sbjct: 269 NFVEAVLDYTNGLGAKLFLEATG 291

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 17  LQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76
           L  V+ P +  D++L++ +A  +N  D    K + P        PG++ +G I+ VG  V
Sbjct: 19  LNSVDIPALAADDILVQNQAIGINPVDWKFIKAN-PINWSNGHVPGVDGAGVIVKVGAKV 77
Query: 77  SRWKVGDQVC---ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
               +G +V    +L   G +AE   +   +V  +P  +S + AAA P    T W
Sbjct: 78  DSKXLGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAW 132

>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase (Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A Resolution Length = 379

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 45/244 (18%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRAD-----------TLQRKGSYPPPKGASPYP-- 61
           L L  ++ P    DEVLI++EA+ LN +D           T +  G+   P   +  P  
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADXSTAKASGTAERPIVTARVPEG 79
Query: 62  ---------------GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVL 106
                          G E +G ++  G + +   +  +  A +GG  Y++   +PA Q L
Sbjct: 80  AXRSXAGRLDASXPVGNEGAGVVVEAGSSPAAQALXGKTVAAIGGAXYSQYRCIPADQCL 139
Query: 107 PVPSGVSLKDAAAF---PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIG 163
            +P G +  D A+    P  A     T  +  H     S LV   +         +S +G
Sbjct: 140 VLPEGATPADGASSFVNPLTALGXVETXRLEGH-----SALVHTAA---------ASNLG 185
Query: 164 TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 223
               Q+    G+++      +E+  + K  GA    N  +  F   + E     G  +  
Sbjct: 186 QXLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFXQDLTEALVSTGATIAF 245
Query: 224 DCMG 227
           D  G
Sbjct: 246 DATG 249

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 142/364 (39%), Gaps = 60/364 (16%)
Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK+I+I +P     L + E E P     EV +KV+   +  +D+   +G  P  K    Y
Sbjct: 21  MKSILIEKPNQ---LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAK----Y 73
Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVC------------------------ALLG--- 90
           P   G E  G I +VG+ V   +VG++V                         A+LG   
Sbjct: 74  PRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHA 133
Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            GG++E   VPA     +P  V+  D  A      T+ + V  T H  P E+  V    +
Sbjct: 134 DGGFSEYAVVPAKNAWKIPEAVA--DQYAVMIEPFTIAANV--TGHGQPTENDTV----L 185
Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
            Y     G  G+    +  G      V V    +E+L   K+ GAD  IN  ++  +   
Sbjct: 186 VYG---AGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAIN-NSQTPLGES 241
Query: 211 KEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
             E G K   +I      S  +  +   +   R+ ++G      +E+    +  K L++ 
Sbjct: 242 FAEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFS-SEPSEVIQQGITGKELSI- 299
Query: 271 AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ-HIG 329
                SR   NK  +V +     W +  + K + +I         A+A  L E  Q H  
Sbjct: 300 ---FSSRLNANKFPVVID-----WLSKGLIKPEKLITHTFDFQHVADAISLFELDQKHCC 351
Query: 330 KIML 333
           K++L
Sbjct: 352 KVLL 355

>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp Length = 330

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74
           + ++ +    +  D VLIKV  + +N  D L  K      +      G++ +GT++S   
Sbjct: 19  VHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--S 76
Query: 75  NVSRWKVGDQVCAL---LG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
           N  R+  GD+V A    LG    GG +E  +VP   ++P+P  +SLK+A  +     T  
Sbjct: 77  NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTAA 136
Query: 129 STVFMTSH--LSP 139
            +V       LSP
Sbjct: 137 LSVHRLEQNGLSP 149

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK---EE 213
           G+  +G F + + +  G   V V AGS  +L + +++GAD+ +N +      R K   + 
Sbjct: 203 GAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI 262
Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA- 272
           T G+G D IL+  G S        L   G  + +   G A  +  +     + L ++ A 
Sbjct: 263 THGRGADFILEATGDSRALLEGSELLRRGGFYSVA--GVAVPQDPVPFKVYEWLVLKNAT 320
Query: 273 --GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK 330
             G+    T +    VS   +N         +  +I   LPL EA +A +LMES + + K
Sbjct: 321 FKGIWVSDTSHFVKTVSITSRN------YQLLSKLITHRLPLKEANKALELMESREAL-K 373
Query: 331 IMLVP 335
           ++L P
Sbjct: 374 VILYP 378

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 110/294 (37%), Gaps = 59/294 (20%)
Query: 15  LQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPYP-GLECSGTILSV 72
           L+L++   P+ K+DEVL+++    +  +D      G         P   G E SGT++ V
Sbjct: 16  LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKV 75
Query: 73  GKNVSRWKVGDQV----------CALLGGGGY------------------AEKVAVPAGQ 104
           GKNV   K GD+V          C     G Y                  A      A  
Sbjct: 76  GKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADF 135
Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGT 164
              +P  VSL++ A    ++  V +       L  G + LV            G+  IG 
Sbjct: 136 CHKLPDNVSLEEGALLEPLSVGVHACRRAGVQL--GTTVLVI-----------GAGPIGL 182
Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-----NYKTEDFVARVKEETGGKGV 219
            ++   K  G  V  TA S  +L V K+ GADV +       +    + R++   G    
Sbjct: 183 VSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP- 241
Query: 220 DVILDCMGAS-------YFQRNLGSLNIDG---RLFIIGTQGGAKTELNITSLF 263
           +V +DC G            R  G+L + G   ++  +        E++I S+F
Sbjct: 242 NVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVF 295

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 149/356 (41%), Gaps = 58/356 (16%)
Query: 13  EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILS 71
           E L +++V  P+ + +EVLI++    + R D    KG         P   G E +GTI+ 
Sbjct: 14  EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVE 73
Query: 72  VGKNVSRWKVGDQVCALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
           VG+ +++ K GD V      G          K  +   Q+  +P   +    + +  V  
Sbjct: 74  VGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI--IPGQTTNGGFSEYMLVKS 130
Query: 126 TVWSTVFMTSHLSPGESF-LVDFCSISYSDVH----------------GGSSGIGTFAIQ 168
           + W  +   + LSP E+  L D  + S   +                  G  G+  + IQ
Sbjct: 131 SRW--LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQ 188
Query: 169 MGKC--QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 226
           + K   + + +   + S++      +LGAD     K  D  + + + T G G  + +D +
Sbjct: 189 ILKALMKNITIVGISRSKKHRDFALELGADYVSEMK--DAESLINKLTDGLGASIAIDLV 246
Query: 227 GASYFQRNLGS-LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI 285
           G      NLG  L  +G + ++G +G             KR++++A      +  NK L+
Sbjct: 247 GTEETTYNLGKLLAQEGAIILVGMEG-------------KRVSLEAF---DTAVWNKKLL 290
Query: 286 ------VSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
                 ++++E +V      GK+KP I K +PL +  +A   ++  +  G+ ++ P
Sbjct: 291 GSNYGSLNDLE-DVVRLSESGKIKPYIIK-VPLDDINKAFTNLDEGRVDGRQVITP 344

>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKE 212
           V G +   G+ A Q+G   G  RV    G++EK L +  +LG D  +NYKT +   +++E
Sbjct: 162 VSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLRE 221
Query: 213 ETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 248
              G GVDV  D +G       +  +N +  + + G
Sbjct: 222 ACPG-GVDVYFDNVGGDISNAVISQMNENSHIILCG 256

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	0.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	0.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-169
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	1e-166
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-157
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-153
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-149
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-149
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	1e-149
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-135
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-134
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-119
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-116
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-111
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-100
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-99
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	4e-99
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	8e-98
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	5e-96
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	7e-93
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-91
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	4e-85
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	8e-79
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	1e-73
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	5e-69
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	8e-69
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-65
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	6e-63
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-56
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	8e-52
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	2e-47
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-47
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	5e-47
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	3e-46
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-42
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-42
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	5e-42
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	6e-41
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-39
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	6e-39
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	4e-38
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-36
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-34
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	6e-34
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	2e-29
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-28
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	4e-28
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	7e-28
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-27
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	5e-21
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	5e-20
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	8e-20
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	2e-19
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	5e-18
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-17
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	5e-16
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	2e-14
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-14
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-14
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-13
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	2e-13
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-13
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	3e-13
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	4e-13
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	4e-13
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	3e-12
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	3e-12
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	5e-11

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  534 bits (1379), Expect = 0.0
 Identities = 154/334 (46%), Positives = 207/334 (61%), Gaps = 12/334 (3%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+ + +   G P+V+ + +   P   + EVL++ EA  +NR D  QR+GSYPPPK ASP 
Sbjct: 29  MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPI 88

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
            GLE SG I+ VG  VS + VGD+VC L  GG YAE   +PAGQ+LP P G     AAA 
Sbjct: 89  LGLELSGEIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAAL 148

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           PE   TVW+ +F  + L+ GES L          +HGG+SGIGT AIQ+ +  G  V+ T
Sbjct: 149 PETFFTVWANLFQMAGLTEGESVL----------IHGGTSGIGTTAIQLARAFGAEVYAT 198

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           AGS  K   C+ LGA   INY++EDF A +K ET G+GVD+ILD +GA+YF+RN+ SL  
Sbjct: 199 AGSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIASLAK 257

Query: 241 DGRLFIIGTQGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
           DG L II   GGA  E +N++ +  KRLTV  + +R R+ E K  I  ++   VWP +  
Sbjct: 258 DGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEA 317

Query: 300 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           G V PVI+K     + A+AH+L+E   H+GK+ML
Sbjct: 318 GTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVML 351

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  529 bits (1364), Expect = 0.0
 Identities = 133/338 (39%), Positives = 197/338 (58%), Gaps = 15/338 (4%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  
Sbjct: 23  MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNI 82

Query: 61  PGLECSGTILSVGKNV-SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            GLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA
Sbjct: 83  LGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
            PE   T +  + +  ++  G+  L+          H G SG+GT AIQ+ +  G    V
Sbjct: 143 IPEAWLTAFQLLHLVGNVQAGDYVLI----------HAGLSGVGTAAIQLTRMAGAIPLV 192

Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
           TAGS++KL + + LGA    NYK EDF     + T G GV++ILDC+G SY+++N+  L 
Sbjct: 193 TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA 252

Query: 240 IDGRLFIIGTQGGAKTELN-ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +DGR  + G  GG        + L  KR ++  + LRSR  + K ++V+   + + P  +
Sbjct: 253 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFS 312

Query: 299 ---VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
                ++ PV+ +  P+ E  EAH+ ME++++IGKI+L
Sbjct: 313 TEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVL 350

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  474 bits (1222), Expect = e-169
 Identities = 100/337 (29%), Positives = 170/337 (50%), Gaps = 19/337 (5%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y        
Sbjct: 30  MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 89

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
            PG + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  A
Sbjct: 90  TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGA 149

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
           A      T +  +  ++ +  GES LV          HG S G+G  A Q+ +  G+++ 
Sbjct: 150 AIGIPYFTAYRALIHSACVKAGESVLV----------HGASGGVGLAACQIARAYGLKIL 199

Query: 179 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
            TAG+EE   +    GA    N++  +++ ++K+  G KG+D+I++ +      ++L  L
Sbjct: 200 GTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLL 259

Query: 239 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           +  GR+ ++G++G    E+N     AK  ++    L S + E      +     +   + 
Sbjct: 260 SHGGRVIVVGSRGTI--EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAA----LQAGME 313

Query: 299 VGKVKPVIYKYLPLCEAAEAHQ-LMESSQHIGKIMLV 334
           +G +KPVI    PL + AEAH+ ++  S   GK++L+
Sbjct: 314 IGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL 350

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  465 bits (1198), Expect = e-166
 Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 30/352 (8%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G    L+L     P+ +D E+ I+V+A  LN  D + R+G+   P      
Sbjct: 4   MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLV 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG ECSG + ++G +V  +++GD+V A +    +AE V  P   V  +P  +S  +AAAF
Sbjct: 64  PGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAF 123

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           P    T +  +F  ++L  G S L          VH    G+G    Q+           
Sbjct: 124 PMNFVTAYVMLFEVANLREGMSVL----------VHSAGGGVGQAVAQLCSTVPNVTVFG 173

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
             S  K    KD      +  +  D+V  VK  +  +GVD++LDC+      + L  L  
Sbjct: 174 TASTFKHEAIKDSVTH--LFDRNADYVQEVKRIS-AEGVDIVLDCLCGDNTGKGLSLLKP 230

Query: 241 DGRLFIIGTQGGAKTE----------------LNITSLFAKRLTVQAAGL-RSRSTENKA 283
            G   + G+      E                +N   L+ +   +    L      + +A
Sbjct: 231 LGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRA 290

Query: 284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
            ++  V + +       K+KPV+     L E  EA Q +    +IGK++L  
Sbjct: 291 GLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV 342

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  443 bits (1143), Expect = e-157
 Identities = 112/360 (31%), Positives = 167/360 (46%), Gaps = 47/360 (13%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+V+   G PEVL++ ++  P+    EV ++++A ALN  D   RKG   P       
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHV 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGG 93
            G + SG + +VG  V  +  GD+V    G                            G 
Sbjct: 61  LGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT 120

Query: 94  YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYS 153
           YAE V +P   + P P  +S ++AAA P    T W  V     + PG+  LV        
Sbjct: 121 YAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLV-------- 172

Query: 154 DVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 213
                 SG+   AIQ+ K  G RV  TAGSE+KL   K LGAD  +NY   D+   V+  
Sbjct: 173 --MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL 230

Query: 214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAG 273
           TGGKG D ++D  GA YF+  + +    GR+ I G   G +  L    +F ++L++  + 
Sbjct: 231 TGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGST 290

Query: 274 LRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           + S+               +   +  GK+KPV+ + LPL  AAE H+L+E  +  GK++L
Sbjct: 291 MASK----------SRLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVL 340

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  433 bits (1115), Expect = e-153
 Identities = 78/352 (22%), Positives = 136/352 (38%), Gaps = 30/352 (8%)

Query: 1   MKAIVITQPGSPE------------VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK 48
           MKA+++   G  +             L+   +  P     +VLIKV   ++N +D    K
Sbjct: 11  MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIK 70

Query: 49  GSYPPPKGASPYPGLECSGTILSVGKNV-SRWKVGDQVC---ALLGGGGYAEKVAVPAGQ 104
           G Y  P+      G E  GTI++ G    ++  VG +V     L   G +AE     A  
Sbjct: 71  GQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAA 130

Query: 105 VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGT 164
            +P+   V  +D AA      T  + +F        ++F++            G+S +  
Sbjct: 131 CIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVKQEGEKAFVM----------TAGASQLCK 179

Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILD 224
             I + K +G R  VT   +E++A+ KD+GA   +N K  DF A ++E    +   + LD
Sbjct: 180 LIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLD 239

Query: 225 CMGASYFQRNLGSLNIDGRLFIIGTQGGAKTEL-NITSLFAKRLTVQAAGLRSRSTENKA 283
            +          ++    R  I G      T +     L  +   ++   L     + K 
Sbjct: 240 AVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKE 299

Query: 284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
                + +      + G+    +   +PL EA  A    E ++  GK+ + P
Sbjct: 300 RRGPAILE-AQKRFSDGRWSTDVTAVVPLAEAI-AWVPAELTKPNGKVFIRP 349

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  423 bits (1089), Expect = e-149
 Identities = 97/335 (28%), Positives = 149/335 (44%), Gaps = 14/335 (4%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI       PE L   +VE P    + V++ V+A  +   D L  KG Y         
Sbjct: 22  MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFV 81

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E +G + S  +  S  K GD+V A    GGYAE+VAV    +LP P  +   +A A 
Sbjct: 82  PGIETAGVVRSAPE-GSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVAL 140

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
                T++        L  GE+ L          V G + GIGT AIQ+ K  G +V   
Sbjct: 141 IANYHTMYFAYARRGQLRAGETVL----------VLGAAGGIGTAAIQIAKGMGAKVIAV 190

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
                     K +GAD+ +    E +   V+E TGG GVD+++D +G   F   + +L  
Sbjct: 191 VNRTAATEFVKSVGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLAS 249

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
           +GRL ++G   G    + +  L  +  ++             A  + E +  +   +A G
Sbjct: 250 EGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWG-EFLRTHADYLYETQAGLEKLVAEG 308

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
            ++P +   +PL E  +A Q     +  GK++LVP
Sbjct: 309 -MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  422 bits (1088), Expect = e-149
 Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 14/338 (4%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
            K I   + G+P +VLQ++      +KD+EV +++    +N +D +   G+Y        
Sbjct: 5   GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPN 64

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119
            PG E  G + +VG  VSR  +G +V  L G G + E V   A  V+P+P  +    AA 
Sbjct: 65  IPGYEGVGIVENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQ 124

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFV 179
                 T W T   T +L   +  L          V+   S IG    Q+ +    R+  
Sbjct: 125 MYINPLTAWVTCTETLNLQRNDVLL----------VNACGSAIGHLFAQLSQILNFRLIA 174

Query: 180 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 239
              + +       LGA   I+  T      V E T G G D  +D +G         SL 
Sbjct: 175 VTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLR 234

Query: 240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 299
            +G    IG   G +       +   ++      LR  + E       E  +++   +  
Sbjct: 235 PNGHFLTIGLLSGIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVEN 293

Query: 300 GKVKPV-IYKYLPLCEAAEAHQLMESSQHI-GKIMLVP 335
            +++ + ++    L +   A  +++S++   GK+ L  
Sbjct: 294 EQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTS 331

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  420 bits (1081), Expect = e-149
 Identities = 99/333 (29%), Positives = 154/333 (46%), Gaps = 33/333 (9%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E  G +            G +  AL+  GG AE+VAVP G +LP+P G+S ++AAAF
Sbjct: 59  PGMEVVGVV-----------EGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAF 107

Query: 121 PEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT 180
           P    T +      +   PGE  LV             +  +GT A+Q+ +  G+RV   
Sbjct: 108 PVSFLTAYL-ALKRAQARPGEKVLV----------QAAAGALGTAAVQVARAMGLRVLAA 156

Query: 181 AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 240
           A   EKLA+   LGA+    Y         +      G+D++L+  G    + +LG L  
Sbjct: 157 ASRPEKLALPLALGAEEAATYAEV-----PERAKAWGGLDLVLEVRGK-EVEESLGLLAH 210

Query: 241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 300
            GRL  IG   G    +    L  + L V   G        +  +V E    + P +   
Sbjct: 211 GGRLVYIGAAEGEVAPIPPLRLMRRNLAV--LGFWLTPLLREGALVEEALGFLLPRLG-R 267

Query: 301 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +++PV+    P  EA  A + +    H GK+++
Sbjct: 268 ELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVV 300

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  388 bits (998), Expect = e-135
 Identities = 84/345 (24%), Positives = 147/345 (42%), Gaps = 31/345 (8%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M A V+ +   P VL+  ++  PQ    +VL+++EA+  N  D   R G  P  +   P 
Sbjct: 8   MIAAVVEEANGPFVLR--KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPA 65

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSL 114
             G++ +GT+++VG  V  ++VGD V  L GG     G +A+  AV A  +   P+ +++
Sbjct: 66  ILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTM 125

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG 174
           + A+  P V  T W  +   + +  G++ L          + GG  G+G  AIQ+   +G
Sbjct: 126 RQASVLPLVFITAWEGLVDRAQVQDGQTVL----------IQGGGGGVGHVAIQIALARG 175

Query: 175 VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234
            RVF TA     L   +DLGA      +  +      E T G+G D++ D +G      +
Sbjct: 176 ARVFATA-RGSDLEYVRDLGATPIDASREPED--YAAEHTAGQGFDLVYDTLGGPVLDAS 232

Query: 235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA-GLRSRSTENKALIVSEVEKNV 293
             ++   G +      G       +  L  K+ T      L +           E+ +  
Sbjct: 233 FSAVKRFGHVVSCLGWGTH----KLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREA 288

Query: 294 WPAIAVGKVKPVI-YKYLPLCEAAEAHQLM----ESSQHIGKIML 333
              +  GK+ P +  +   + E   A+  +    +  +  GKI +
Sbjct: 289 DALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAI 333

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  384 bits (989), Expect = e-134
 Identities = 92/357 (25%), Positives = 151/357 (42%), Gaps = 47/357 (13%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+     +  +P  L+L E   P+  + +++++  A +LN  D L  +            
Sbjct: 28  MQEWST-ETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFV 86

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCAL---------------------LGG---GGYAE 96
           P  + SG + +VGK+V+R++ GD+V +                      LGG   G  +E
Sbjct: 87  PASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSE 146

Query: 97  KVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH 156
            V +P G  +  P  +   +A+  P    T W  +    HL  G+  +V           
Sbjct: 147 YVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVV----------- 195

Query: 157 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 216
            G+ G+  F +Q+ K  G  V VT+ S EKL     LGAD  IN   ED+V RV   TG 
Sbjct: 196 QGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGD 255

Query: 217 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS 276
           +G D IL+  G +   ++L ++  DGR+ +IG   G +    +  L  K   VQ   +  
Sbjct: 256 RGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGH 315

Query: 277 RSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           R             +++  A+    +KPVI       E  EA   ++     GK+++
Sbjct: 316 R----------RALEDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLD-RGPFGKVVI 361

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  347 bits (892), Expect = e-119
 Identities = 85/353 (24%), Positives = 141/353 (39%), Gaps = 38/353 (10%)

Query: 1   MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           M+ +V+T+        V   ++   P   D ++L++     +N +D     G Y P    
Sbjct: 24  MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP 83

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA 117
               G E  G ++++G + S      Q  A +  G +AE   VPA    PVPS     + 
Sbjct: 84  PFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPVPSVKP--EY 141

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
                   T + ++     LS G+  L          V   + G G FA+Q+ K     V
Sbjct: 142 LTLLVSGTTAYISLKELGGLSEGKKVL----------VTAAAGGTGQFAMQLSKKAKCHV 191

Query: 178 FVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS 237
             T  S+EK A  K LG D  INYKTE     +K +   +GVDV+ + +G + F   + +
Sbjct: 192 IGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLK-QEYPEGVDVVYESVGGAMFDLAVDA 250

Query: 238 LNIDGRLFIIGTQGGAKTELNIT---------SLFAKRLTVQAAGLRSRSTENKALIVSE 288
           L   GRL +IG   G +T   ++          L  K  +VQ   L    ++ +A +   
Sbjct: 251 LATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAM--- 307

Query: 289 VEKNVWPAIAVGKVKPVI--------YKYLPLCEAAEAHQLMESSQHIGKIML 333
              ++      G +   +         ++  L     A   M   ++ GKI++
Sbjct: 308 --SHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  337 bits (867), Expect = e-116
 Identities = 95/340 (27%), Positives = 147/340 (43%), Gaps = 15/340 (4%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGAS-P 59
           + A VI + G P+    +EV+       +V ++  A  +N  DT  R G   P      P
Sbjct: 2   VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDA 117
              G E +  +  VG  V+ + VG++VC  L   G Y+++   PA +++ VP  + L D 
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDV 121

Query: 118 --AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV 175
             A       T    +  T  + PG+  L+          H  + G+G   +   +  G 
Sbjct: 122 HLAGLMLKGMTAQYLLHQTHKVKPGDYVLI----------HAAAGGMGHIMVPWARHLGA 171

Query: 176 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235
            V  T  +EEK    + LG    INY T+DF   V+E TGGKGVDV+ D +G    Q++L
Sbjct: 172 TVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSL 231

Query: 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 295
             L   G     G   G    + +      R ++           +    + E  K ++ 
Sbjct: 232 DCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFD 291

Query: 296 AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           A+  G +   + K  PL EAA AH+ M   Q IG I+L+P
Sbjct: 292 AVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLP 331

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  326 bits (838), Expect = e-111
 Identities = 69/339 (20%), Positives = 127/339 (37%), Gaps = 16/339 (4%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           ++A+V    G P +V++L+ +E   ++  +V +K+ A  +N +D    +G+Y        
Sbjct: 27  VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPA 86

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAA 118
             G E    +++VG NV+  K GD V     G G +  +       ++ VPS + L+ AA
Sbjct: 87  VGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAA 146

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
                 CT +  +     L PG+S +           +  +SG+G   IQ+    G+R  
Sbjct: 147 TLGVNPCTAYRMLMDFEQLQPGDSVIQ----------NASNSGVGQAVIQIAAALGLRTI 196

Query: 179 VTAGSEEKLA----VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234
                   +       K LGA+  I  +                  + L+C+G       
Sbjct: 197 NVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 256

Query: 235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 294
           L  L   G +   G         +++ L  K L ++   L     ++      E+   + 
Sbjct: 257 LRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLC 316

Query: 295 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             I  G++       +PL +   A +         K +L
Sbjct: 317 DLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQIL 355

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  297 bits (763), Expect = e-100
 Identities = 97/337 (28%), Positives = 153/337 (45%), Gaps = 19/337 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            K I+I + G  +V++ ++   P I ++E+LIK + T +N  ++  RKG YP  K   PY
Sbjct: 9   QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK---PY 65

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVS---LKD 116
             G E SGT+++ GK V+ ++VGDQV  +              G V+ +P G S   LK 
Sbjct: 66  VLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKL 125

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR 176
            AA      T  S      H+  G+  L+             + G+G    Q+ K +G  
Sbjct: 126 YAAGLLQVLTALSFTNEAYHVKKGDYVLL----------FAAAGGVGLILNQLLKMKGAH 175

Query: 177 VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
               A ++EKL + K+ GA+  IN   ED + +V + T GKGVD   D +G   F+ +L 
Sbjct: 176 TIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLA 235

Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 296
           +L   G     G   G     +IT L  K +T+    L     + +           +  
Sbjct: 236 ALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEW--KYYSDEFFGL 293

Query: 297 IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +   K+   IYK  PL +   A   +ES + +GK++L
Sbjct: 294 VNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVL 330

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  294 bits (756), Expect = 3e-99
 Identities = 92/341 (26%), Positives = 149/341 (43%), Gaps = 37/341 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKAI   Q G P+VL+L +   P+ + +++LIKV A +LN  D   R GS    K     
Sbjct: 7   MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 61  ----PGLECSGTILSVGKNVSRWKVGDQVCALLG----GGGYAEKVAVPAGQVLPVPSGV 112
                G + SG ++ +G +V+   +GD+V  + G       YAE V      ++     +
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172
           S   AA+ P    T        + +  G+  L          +H G+ G+G  AIQ+ K 
Sbjct: 127 SFLQAASLPTAGLTAL-QALNQAEVKQGDVVL----------IHAGAGGVGHLAIQLAKQ 175

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 232
           +G  V  TA S+   A  K LGA+ CINY  EDF+  +        VD ++D +G     
Sbjct: 176 KGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAIST-----PVDAVIDLVGGDVGI 229

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292
           +++  L   G +  + T    +         AK+   +A GL  +          E    
Sbjct: 230 QSIDCLKETGCIVSVPTITAGRVI-----EVAKQKHRRAFGLLKQFN-------IEELHY 277

Query: 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +   ++  K++  I +   L EA  AH+L+E+    GK++ 
Sbjct: 278 LGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVF 318

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  294 bits (755), Expect = 4e-99
 Identities = 101/338 (29%), Positives = 152/338 (44%), Gaps = 17/338 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            K I  +  G PEVL+  + E        V+++ +A  LN  DT  R G YP P    P 
Sbjct: 2   AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAP--FLPS 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
             G E +G + +VG  V+R+KVGD+V       G Y+E   +P   ++ +   VS + AA
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAA 119

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
           A      TV   +  T  + PGE  L           H  + G+G+ A Q  K  G ++ 
Sbjct: 120 ALMLKGLTVQYLLRQTYQVKPGEIILF----------HAAAGGVGSLACQWAKALGAKLI 169

Query: 179 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
            T  S EK A  K LGA   I+Y  ED   RV E T GK   V+ D +G   +  +L S+
Sbjct: 170 GTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSV 229

Query: 239 NIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
              G +   G   G  + +N+  L  K  + V    L S +   + L     E  ++  +
Sbjct: 230 APRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADE--LFDML 287

Query: 298 AVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           A GK+K    +   L +AA+A   + + +  G  +L+P
Sbjct: 288 ASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  292 bits (750), Expect = 8e-98
 Identities = 75/370 (20%), Positives = 135/370 (36%), Gaps = 46/370 (12%)

Query: 1   MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPK 55
            +A++ TQ G P+     Q  E++D  +  +EV++K   + +N +D  Q +G YP  P K
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 56  GASPY-------PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLP 107
                        G E    ++ VG NVS  + GD V  + +  G +           + 
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 108 V-----------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH 156
           +           P+G+++   A       T +  +     L+PG+ + +          +
Sbjct: 124 LPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFI---------QN 174

Query: 157 GGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKLAVCKDLGADVCINYKTE---DFVAR 209
           GG+S +G +A Q+GK                +E +A  K+LGA   I        +F   
Sbjct: 175 GGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPT 234

Query: 210 VKEET--GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
           +KE     G    + L+C+G          LN +G +   G        +  +    K  
Sbjct: 235 IKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNF 294

Query: 268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME---S 324
           T     +      NK L  S + + +      GK+                H+L +   +
Sbjct: 295 TSAGFWVTELLKNNKELKTSTLNQ-IIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVA 353

Query: 325 SQHIGKIMLV 334
           +   GK ++ 
Sbjct: 354 NSKDGKQLIT 363

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  286 bits (735), Expect = 5e-96
 Identities = 106/340 (31%), Positives = 157/340 (46%), Gaps = 19/340 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
              I   + G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP    P 
Sbjct: 2   ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPS--LPS 59

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQVC-ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
             G E +G +  VG  V   K GD+V  A    G Y+    + A +   +P+ +S + AA
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVF 178
           A      TV+  +  T  + P E FL           H  + G+G  A Q  K  G ++ 
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLF----------HAAAGGVGLIACQWAKALGAKLI 169

Query: 179 VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
            T G+ +K       GA   INY+ ED V R+KE TGGK V V+ D +G   ++R+L  L
Sbjct: 170 GTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCL 229

Query: 239 NIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKALIVSEVEKNVWPAI 297
              G +   G   GA T +N+  L  K  L V    L+   T  + L  +  E  ++  I
Sbjct: 230 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE--LFSLI 287

Query: 298 AVGKVKPVIYKY--LPLCEAAEAHQLMESSQHIGKIMLVP 335
           A G +K  + +    PL +A  AH+++ES    G  +L+P
Sbjct: 288 ASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  283 bits (725), Expect = 7e-93
 Identities = 76/398 (19%), Positives = 141/398 (35%), Gaps = 84/398 (21%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M A + T+   P + + L +V  P++   E L+ V A+++N               G   
Sbjct: 43  MFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE 102

Query: 60  Y-----------------PGLECSGTILSVGKNVSRWKVGDQVCAL-------------- 88
                              G + +G +L  G  V+ W+ GD+V A               
Sbjct: 103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHND 162

Query: 89  -------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
                           GG AE   V + Q++P P  +S ++AAA   V  T +  +   +
Sbjct: 163 TMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRN 222

Query: 136 --HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL 193
              +  G++ L+           G S G+G++A Q     G        S +K  +C+ +
Sbjct: 223 GAGMKQGDNVLI----------WGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM 272

Query: 194 GADVCINYKTE-----------------DFVARVKEETGGKGVDVILDCMGASYFQRNLG 236
           GA+  I+   E                  F  R++E TGG+ +D++ +  G   F  ++ 
Sbjct: 273 GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVF 332

Query: 237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 296
                G +    +  G   E +   L+     +  +   +                    
Sbjct: 333 VTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANY----------REAWEANRL 382

Query: 297 IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 334
           IA G++ P + K   L +  +A   +  + H GK+ ++
Sbjct: 383 IAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVL 420

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  277 bits (709), Expect = 2e-91
 Identities = 62/385 (16%), Positives = 123/385 (31%), Gaps = 64/385 (16%)

Query: 1   MKAIVIT---QPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----- 52
             A+ +    +      L L  ++ P    DEVLI++EA+ LN +D     G+       
Sbjct: 3   HSALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAK 62

Query: 53  -----------------------PPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL 89
                                      AS   G E +G ++  G + +   +  +  A +
Sbjct: 63  ASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI 122

Query: 90  GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCS 149
           GG  Y++   +PA Q L +P G +  D A+      T    +  T  L    + +     
Sbjct: 123 GGAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALG-MVETMRLEGHSALVH---- 177

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                    +S +G    Q+    G+++      +E+  + K  GA    N  +  F+  
Sbjct: 178 ------TAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQD 231

Query: 210 VKEETGGKGVDVILDCMGASYFQRNLGSL-----------------NIDGRLFIIGTQGG 252
           + E     G  +  D  G       + +                      ++++ G    
Sbjct: 232 LTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT 291

Query: 253 AKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 312
           + TE N    F     +    L     +      + +++ V   +          K + L
Sbjct: 292 SPTEFN--RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELK-TTFASHYSKEISL 348

Query: 313 CEAAEAHQLMESSQHI--GKIMLVP 335
            E  +   +   ++     K ++ P
Sbjct: 349 AEVLDLDMIAVYNKRATGEKYLINP 373

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  262 bits (672), Expect = 4e-85
 Identities = 86/409 (21%), Positives = 145/409 (35%), Gaps = 94/409 (22%)

Query: 1   MKAIVITQ-----------PGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG 49
             A+ +                 + L+L EV  P++  DEVL+ V A+++N         
Sbjct: 25  YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMF 84

Query: 50  SYPPPKGASPY-----------------PGLECSGTILSVGKNVSRWKVGDQVCA----- 87
              P                         G +CSG ++  G  V RWK GD V       
Sbjct: 85  EPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHV 144

Query: 88  ------------------LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
                               G     GG AE   V A Q+LP P+ ++ ++AA  P  A 
Sbjct: 145 DEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAG 204

Query: 126 TVWSTVFMTS--HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 183
           T +  +       +  G+  L+           G S G+G++AIQ  K  G        S
Sbjct: 205 TAYRMLVSDRGAQMKQGDIVLI----------WGASGGLGSYAIQFVKNGGGIPVAVVSS 254

Query: 184 EEKLAVCKDLGADVCINYKTEDF-----------------VARVKEETGGKGVDVILDCM 226
            +K A  + LG D+ IN                       +A++  E  G+  D++ +  
Sbjct: 255 AQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHT 314

Query: 227 GASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV 286
           G   F  ++      G +   G+  G     +   L+ K   +  +   +          
Sbjct: 315 GRVTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANH--------- 365

Query: 287 SEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
            E ++        G V P +    PL EAAEA +++++S+ +GK+ ++ 
Sbjct: 366 -EEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLC 413

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  244 bits (625), Expect = 8e-79
 Identities = 88/366 (24%), Positives = 140/366 (38%), Gaps = 48/366 (13%)

Query: 1   MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGAS 58
             A VI + G  EVL+  Q +  P I   +EV++KV A ++N  D   R G         
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 59  PY--------------PGLECSGTILSVGKNVSRWKVGDQVCALLG---GGGYAEKVAVP 101
                            G + SG ++  G +V  +K GD+V A +     G  +E V V 
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVS 141

Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----SPGESFLVDFCSISYSDVHG 157
             +V   P  ++   AA+ P VA T WS +     L      G+  L          + G
Sbjct: 142 GNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVL----------ILG 191

Query: 158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 217
            S G+GTFAIQ+ K     V     S++   + + LGAD  I+YK+     ++K     K
Sbjct: 192 ASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKS---LK 247

Query: 218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 277
             D ILD +G S        L        +         ++     A  +      + S+
Sbjct: 248 PFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMD-RLGIADGMLQTGVTVGSK 306

Query: 278 STENKALIVSEVEKNVWPA----------IAVGKVKPVIYKYLPLCEAAEAHQLMESSQH 327
           + ++    V         +          +  GK++PVI +  P  +  EA   +E    
Sbjct: 307 ALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHA 366

Query: 328 IGKIML 333
            GK ++
Sbjct: 367 RGKTVI 372

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  230 bits (588), Expect = 1e-73
 Identities = 78/352 (22%), Positives = 145/352 (41%), Gaps = 38/352 (10%)

Query: 1   MKAIVITQPGS---PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           +KAI   QP       + +   ++ P+ K  E+L+K+++ ++N  DT QR          
Sbjct: 3   LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA--- 59

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQVCA---LLGGGGYAEKVAVPAGQVLPVPSGVS 113
            P   G +  G + SVG  V+ +  GD V         G  AE   +    V   P  +S
Sbjct: 60  -PRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNIS 118

Query: 114 LKDAAAFPEVACTVWSTVF------MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAI 167
            + A + P    T + T+F         + + G++ L+            G+ G+G+ A 
Sbjct: 119 AEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLI----------INGAGGVGSIAT 168

Query: 168 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 227
           Q+ K  G+RV  TA   E +   K +GAD+ +N+K         +  G + VD +     
Sbjct: 169 QIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQ--FKTQGIELVDYVFCTFN 226

Query: 228 -ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV 286
              Y+   +  +   G    I T    + + ++ +L  K L+     + +R       ++
Sbjct: 227 TDMYYDDMIQLVKPRGH---IATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMI 283

Query: 287 SEVE--KNVWPAIAVGKVKPVI---YKYLPLCEAAEAHQLMESSQHIGKIML 333
              E  +++   +     +P      + L      +AHQ++ES+  IGK+++
Sbjct: 284 KHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVI 335

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  218 bits (557), Expect = 5e-69
 Identities = 95/373 (25%), Positives = 147/373 (39%), Gaps = 64/373 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 61  -------PGLECSGTILSVGKNVSRWKVGDQV-------------C----------ALLG 90
                   G E +G I  VG  V  +  GD V             C              
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 91  G----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVD 146
           G    G YAE V VP  + +     ++  +AA       T +  V   + L P ++ LV 
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLV- 176

Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                     G   G+GT A+Q+ K   G  +      EE +   K  GAD  IN   +D
Sbjct: 177 ---------VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQD 227

Query: 206 FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 264
            +A ++  T  KGVD ++D   +         +L   G+  ++G  G      +   +  
Sbjct: 228 PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-DLHYHAPLITL 286

Query: 265 KRLTVQAA--GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 322
             +    +  G +S       L               GKVKP+I K + L EA EA   +
Sbjct: 287 SEIQFVGSLVGNQSDFLGIMRL------------AEAGKVKPMITKTMKLEEANEAIDNL 334

Query: 323 ESSQHIGKIMLVP 335
           E+ + IG+ +L+P
Sbjct: 335 ENFKAIGRQVLIP 347

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  216 bits (553), Expect = 8e-69
 Identities = 60/341 (17%), Positives = 116/341 (34%), Gaps = 37/341 (10%)

Query: 1   MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+   +    +    + L  V+ P +  D++L++ +A  +N  D    K +       + 
Sbjct: 2   MEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWS--NG 59

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCA---LLGGGGYAEKVAVPAGQVLPVPSGVSLK 115
           + PG++ +G I+ VG  V    +G +V     L   G +AE   +   +V+ +P  +S +
Sbjct: 60  HVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFE 119

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV 175
            AAA P    T W   F    L+     L+            G   +     QM    G 
Sbjct: 120 RAAALPCPLLTAW-QAFEKIPLTKQREVLI-----------VGFGAVNNLLTQMLNNAGY 167

Query: 176 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235
            V     +    A+    G        ++            +    I D + +      +
Sbjct: 168 VVD-LVSASLSQALAAKRGVRHLYREPSQV----------TQKYFAIFDAVNSQNAAALV 216

Query: 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT---VQAAGLRSRSTENKALIVSEVEKN 292
            SL  +G +  I  +        I   F + ++   +    L          I+ +  + 
Sbjct: 217 PSLKANGHIICIQDRI----PAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEA 272

Query: 293 VWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
           +   IA GK++          +  EA    E ++    + L
Sbjct: 273 LLTLIAQGKMEIAAPDIFRFEQMIEALDHSEQTKLKTVLTL 313

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  209 bits (535), Expect = 2e-65
 Identities = 73/346 (21%), Positives = 133/346 (38%), Gaps = 25/346 (7%)

Query: 1   MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA 57
           MKA+   +P        L   E+  P     ++L++V+A ++N  D   R+ + P     
Sbjct: 23  MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGT-- 80

Query: 58  SPY-PGLECSGTILSVGKNVSRWKVGDQV---CALLGGGGYAEKVAVPAGQVLPVPSGVS 113
                G + +G + +VG +V+ ++ GD+V    +++  G  AE   V    V   P  + 
Sbjct: 81  DWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLD 140

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-C 172
             +AAA P  + T W   F    ++           I      GG+ G+G+ A+Q+ +  
Sbjct: 141 WAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILI-----VGGAGGVGSIAVQIARQR 195

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 232
             + V  TA   E     K LGA   I++      A V     G    V        +  
Sbjct: 196 TDLTVIATASRPETQEWVKSLGAHHVIDHSKPLA-AEVAALGLGAPAFVFSTTHTDKHAA 254

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE-- 290
                +   GR  +I          +I     K +++    + +R       +  +    
Sbjct: 255 EIADLIAPQGRFCLIDDPS----AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLL 310

Query: 291 KNVWPAIAVGKVKPVIYKYLPLCEAA---EAHQLMESSQHIGKIML 333
            +V   +  G+++  +   L    AA   +AH L+ES    GK+++
Sbjct: 311 NDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVI 356

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  203 bits (518), Expect = 6e-63
 Identities = 65/346 (18%), Positives = 122/346 (35%), Gaps = 31/346 (8%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             A+ +       V        P +  D+V ++VEA A+N +DT  R     P      +
Sbjct: 12  QTALTVNDHDEVTVWN--AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPW----AF 65

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLPVPSGV 112
            G + +GT+++VG +V+  +VGD+V              G +++           +P G+
Sbjct: 66  LGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGL 125

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV--HGGSSGIGTFAIQMG 170
           S + AAA P    T    + +     P  S            V  +GGS+   T  +QM 
Sbjct: 126 SFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQML 185

Query: 171 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230
           +  G     T  S     + K  GA+   +Y+  +    ++  T    +   LDC+    
Sbjct: 186 RLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNN-LRYALDCITNVE 243

Query: 231 FQRNLGSL--NIDGRLF-IIGTQGGAKTELNIT-------SLFAKRLTVQAAGLRSRSTE 280
                 +      G    +      A T   +T       ++F +  T  A   R  S E
Sbjct: 244 STTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEE 303

Query: 281 NKALIVSEVEKNVWPAIAVGKVKPVIYKYLP--LCEAAEAHQLMES 324
            +     ++ +     +  G++     + +        +  +L+  
Sbjct: 304 ERQFGE-DLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRK 348

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  193 bits (492), Expect = 7e-56
 Identities = 84/337 (24%), Positives = 143/337 (42%), Gaps = 31/337 (9%)

Query: 4   IVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           +  T+PGS + L L +       + D EV I + A  +N  D L   G YP         
Sbjct: 213 LEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGV----ASL 268

Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121
           G E +G ++  G  V+    GD+V  +     +          V  +P+G S   AA+ P
Sbjct: 269 GSEGAGVVVETGPGVTGLAPGDRVMGM-IPKAFGPLAVADHRMVTRIPAGWSFARAASVP 327

Query: 122 EVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA 181
            V  T +  +   + L PGES L          VH  + G+G  AIQ+ +  G  V+ TA
Sbjct: 328 IVFLTAYYALVDLAGLRPGESLL----------VHSAAGGVGMAAIQLARHLGAEVYATA 377

Query: 182 GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 241
             ++  AV  +L  +   + +T DF  +    TGG+GVDV+L+ +   +   +L  L   
Sbjct: 378 SEDKWQAV--ELSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRG 435

Query: 242 GRLFIIGTQGGAKTELNIT---SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
           GR   +G     KT++      +     ++ QA        E     + E+   +     
Sbjct: 436 GRFLELG-----KTDVRDPVEVADAHPGVSYQAFDT----VEAGPQRIGEMLHELVELFE 486

Query: 299 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
              ++P+      + +A EA + +  ++H+GK++L  
Sbjct: 487 GRVLEPLPVTAWDVRQAPEALRHLSQARHVGKLVLTM 523

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  173 bits (441), Expect = 8e-52
 Identities = 73/374 (19%), Positives = 139/374 (37%), Gaps = 72/374 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA ++ +   P  L +++V  P+ + +EVLI++    + R D    KG         P 
Sbjct: 4   SKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPI 61

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV----------C-------------ALLGG----G 92
             G E +GTI+ VG  +++ K GD V          C              ++ G    G
Sbjct: 62  ILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG 120

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTV---FMTSHLSPGESFLVD 146
           G++E + V + + L   + +S  +AA    +A    T    +               +V 
Sbjct: 121 GFSEYMLVKSSRWLVKLNSLSPVEAAP---LADAGTTSMGAIRQALPFISKFAEPVVIV- 176

Query: 147 FCSISYSDVHGGSSGIGTFAIQMGK--CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE 204
                      G  G+  + IQ+ K   + + +   + S++      +LGAD       +
Sbjct: 177 ----------NGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE--MK 224

Query: 205 DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF 263
           D  + + + T G G  + +D +G           L  +G + ++G +G  +  L      
Sbjct: 225 DAESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGK-RVSLEAFDTA 283

Query: 264 AKRLTVQAA--GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 321
                +  +  G  +   +   L               GK+KP I K  PL +  +A   
Sbjct: 284 VWNKKLLGSNYGSLNDLEDVVRL------------SESGKIKPYIIKV-PLDDINKAFTN 330

Query: 322 MESSQHIGKIMLVP 335
           ++  +  G+ ++ P
Sbjct: 331 LDEGRVDGRQVITP 344

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  162 bits (413), Expect = 2e-47
 Identities = 80/373 (21%), Positives = 143/373 (38%), Gaps = 67/373 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGAS- 58
           +KA  + +   P  L++++V+ P+++   +V++++    +   D    +G +        
Sbjct: 16  LKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 73

Query: 59  PY-PGLECSGTILSVGKNVSRWKVGDQV-------------C----------ALLGG--- 91
           PY  G E  G I  V + V   + GD V             C              G   
Sbjct: 74  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 133

Query: 92  -GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMT-SHLSPGESFLVD 146
            GG+AE +      V+ +P  +S +       +A    T +  V      L PG    + 
Sbjct: 134 DGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAI- 192

Query: 147 FCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTED 205
                      G  G+G  A+Q+ K      V      EEKL + + LGAD  ++ +  D
Sbjct: 193 ----------VGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RD 241

Query: 206 FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFA 264
            V +V E T G+GV+V +D +G+          L   GRL I+G   G +       + +
Sbjct: 242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGY--GGELRFPTIRVIS 299

Query: 265 KRLTVQAA--GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 322
             ++ + +  G      E   L               GKV+  +  +  L E  +  + +
Sbjct: 300 SEVSFEGSLVGNYVELHELVTL------------ALQGKVRVEVDIH-KLDEINDVLERL 346

Query: 323 ESSQHIGKIMLVP 335
           E  + +G+ +L+P
Sbjct: 347 EKGEVLGRAVLIP 359

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  162 bits (413), Expect = 2e-47
 Identities = 71/370 (19%), Positives = 135/370 (36%), Gaps = 66/370 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+ +   G+   + ++ V  P+   D++L+KVEA  +   D     G +P      P 
Sbjct: 24  MKAVRLESVGN---ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP---PV 77

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLGGG 92
             G E  G ++  G  V     G ++                             +   G
Sbjct: 78  TLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDG 137

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY 152
           G+AE V VP  Q   +P  +     A    +AC +       S +  G +  +       
Sbjct: 138 GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGV--DLSGIKAGSTVAI------- 188

Query: 153 SDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 211
                G   IG   +Q+ +  G   V ++     K  + +++GA   ++    D V  + 
Sbjct: 189 ----LGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIA 244

Query: 212 EETG--GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRL 267
              G    GVDV+++C G     +++       G + I+G    G K E+    +  + L
Sbjct: 245 GPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFREL 304

Query: 268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESS 325
            V  +   +     +A             +A G   +  +I + + L EA +      ++
Sbjct: 305 RVLGS-FINPFVHRRAA----------DLVATGAIEIDRMISRRISLDEAPDVISNPAAA 353

Query: 326 QHIGKIMLVP 335
             + K++++P
Sbjct: 354 GEV-KVLVIP 362

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  161 bits (409), Expect = 5e-47
 Identities = 77/376 (20%), Positives = 131/376 (34%), Gaps = 72/376 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA+  T+ GS     + ++  P     E+L+KV A  L  +D               P 
Sbjct: 1   MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPL 58

Query: 61  -PGLECSGTILSVGKNVSRWKVGDQV-------------C-------------------A 87
             G E  GT+  +G+ V+ + VGD V             C                    
Sbjct: 59  TLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPG 118

Query: 88  LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC----TVWSTVFMTSHLSPGESF 143
           L   G  AE + V + + L     +    AA    +         +   +   L PG + 
Sbjct: 119 LGSPGSMAEYMIVDSARHLVPIGDLDPVAAAP---LTDAGLTPYHAISRVLPLLGPGSTA 175

Query: 144 LVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYK 202
           +V            G  G+G   IQ+ +     RV      +++LA+ +++GAD  +   
Sbjct: 176 VV-----------IGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK-S 223

Query: 203 TEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITS 261
                  ++E TGG+G   + D +GA          + +DG + ++G   GA        
Sbjct: 224 GAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAH-AKVGFF 282

Query: 262 LFAKRLTVQAA--GLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH 319
           +     +V     G RS   E  AL               G++      +  L E   A+
Sbjct: 283 MIPFGASVVTPYWGTRSELMEVVAL------------ARAGRLDIHTETF-TLDEGPAAY 329

Query: 320 QLMESSQHIGKIMLVP 335
           + +      G+ ++VP
Sbjct: 330 RRLREGSIRGRGVVVP 345

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  159 bits (404), Expect = 3e-46
 Identities = 74/375 (19%), Positives = 129/375 (34%), Gaps = 69/375 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRAD--TLQRKGSYPPPKGA 57
           MK++V    G    +++ E   P+IK  DEV +K+ ++ L  +D   + + G++  P   
Sbjct: 1   MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPIT- 56

Query: 58  SPYPGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLG 90
               G E SG I +VG  V     GD V                                
Sbjct: 57  ---LGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR 113

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            GG+AE + V    V  +P+ + ++D A    +   + +     +     ++ ++     
Sbjct: 114 DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAF--HLAQGCENKNVII----- 166

Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                  G+  IG  AIQ     G   V     S EKLA+ K  GA    N         
Sbjct: 167 ------IGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQM 220

Query: 210 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT--ELNITSLFAKR 266
                  +   +IL+  G     +  +       +L ++GT              +  K 
Sbjct: 221 QSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKE 280

Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWP----AIAVGK--VKPVIYKYLPLCEAAEAHQ 320
           LTV  + +   S               W      +   K  ++P+I         A+A +
Sbjct: 281 LTVIGSWMNYSSPW---------PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVR 331

Query: 321 LMESSQHIGKIMLVP 335
            +  +   GK++L+P
Sbjct: 332 DIARNAMPGKVLLIP 346

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  151 bits (383), Expect = 1e-42
 Identities = 70/393 (17%), Positives = 135/393 (34%), Gaps = 85/393 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
                + +      ++++EV +P+I K  E++IKV+A  +  +D    +           
Sbjct: 31  WLGSKVWRYPE---VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPG 87

Query: 60  Y------PGLECSGTILSVGKNV------SRWKVGDQVC--------------------- 86
                   G E SG ++  G          R+++G+ VC                     
Sbjct: 88  LTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHC 147

Query: 87  ------ALLGGGGYAEKVAVPAGQVLPVPSGVSLK------DAAAFPE-VACTVWSTVFM 133
                      G +AE V V A     +     +        A +  E  +    + +  
Sbjct: 148 ENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVR 207

Query: 134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKD 192
              + PG++ ++            G   IG  A+ + K  G   V ++  SE +  + K+
Sbjct: 208 GGGIRPGDNVVI-----------LGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256

Query: 193 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGR----LFII 247
           LGAD  I+   E+FV  V + T G G  + L+  G        +  +    R       I
Sbjct: 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAI 316

Query: 248 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA----IAVG-KV 302
             +  AK  L       +R  +   G +  S               +P     +A G  +
Sbjct: 317 VARADAKIPLTGEVFQVRRAQIV--GSQGHSGH-----------GTFPRVISLMASGMDM 363

Query: 303 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
             +I K + + E  E  + +++ + + K+ ++ 
Sbjct: 364 TKIISKTVSMEEIPEYIKRLQTDKSLVKVTMLN 396

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  148 bits (377), Expect = 2e-42
 Identities = 93/373 (24%), Positives = 151/373 (40%), Gaps = 70/373 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
           M AI+ T+PG     +L EV+ P+    EVLIKV AT++   D  +     +   +   P
Sbjct: 5   MVAIMKTKPG--YGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG------ 91
              G E +G ++ +G  V   +VGD V                     C           
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD 122

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
           G +AE   VPA  +   P  +  + A     +   V +   + +    G+S L+      
Sbjct: 123 GVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDT---VLAGPISGKSVLI------ 173

Query: 152 YSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
                 G+  +G   I + K  G   V V+  S+ +  + K +GAD  IN   ED V  V
Sbjct: 174 -----TGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEV 228

Query: 211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLT 268
            + T G GVDV L+  GA    ++ L ++   GR+ ++G     K  ++  +L   K LT
Sbjct: 229 MDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGL-YPGKVTIDFNNLIIFKALT 287

Query: 269 VQAAGLRSRSTENKALIVSEVEKNVWPA----IAVGK--VKPVI-YKYLPLCEAAEAHQL 321
           +   G+  R                W      +  GK  + P+I +KY    +  EA +L
Sbjct: 288 IY--GITGRHL-----------WETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFEL 334

Query: 322 MESSQHIGKIMLV 334
           M + +  GK++ +
Sbjct: 335 MRAGKT-GKVVFM 346

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  148 bits (375), Expect = 5e-42
 Identities = 87/360 (24%), Positives = 139/360 (38%), Gaps = 67/360 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G+P  L + EV  PQ    +V +K+EA+ +   D     G +P        
Sbjct: 3   MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-----------C-------------ALLGG----G 92
           PG E  G + +VG  VSR K GD+V           C                 G    G
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNG 120

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVDFCS 149
           GY E V      V  +P  V   + A  P + C   TV+  +   +   PG+  ++    
Sbjct: 121 GYGEYVVADPNYVGLLPDKVGFVEIA--P-ILCAGVTVYKGL-KVTDTRPGQWVVI---- 172

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                   G  G+G  A+Q  +  G+RV      + KL + + LGA+V +N +  D  A 
Sbjct: 173 -------SGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAW 225

Query: 210 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 268
           +++E G  G   +L    +   F + +G +   G + + G   G      I  +  K +T
Sbjct: 226 LQKEIG--GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGIT 282

Query: 269 VQ--AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 326
           ++    G RS   E  +L  +          A G VK  +     L +  +    +   +
Sbjct: 283 IRGSIVGTRSDLQE--SLDFA----------AHGDVKATV-STAKLDDVNDVFGRLREGK 329

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  145 bits (367), Expect = 6e-41
 Identities = 94/363 (25%), Positives = 140/363 (38%), Gaps = 73/363 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGD----------------------QVC--ALLGG----G 92
           PG E  G +  VG  V+  KVGD                       +C      G    G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVDFCS 149
           GYAE     A  V+ +P  +S ++AA  P + C   T +  +   +   PGE   +    
Sbjct: 119 GYAEYCRAAADYVVKIPDNLSFEEAA--P-IFCAGVTTYKAL-KVTGAKPGEWVAI---- 170

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                   G  G+G  A+Q  K  G+ V      +EKL + K+LGAD+ +N   ED    
Sbjct: 171 -------YGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKF 223

Query: 210 VKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT 268
           +KE+ G  GV   +    +   FQ    S+   G   ++G     +  + I       + 
Sbjct: 224 MKEKVG--GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIK 280

Query: 269 VQ--AAGLRSRSTENKALIVSEVEKNVWPAI---AVGKVKPVIYKYLPLCEAAEAHQLME 323
           +     G R    E               A+   A GKVK +I +  PL +  E    M 
Sbjct: 281 IIGSIVGTRKDLQE---------------ALQFAAEGKVKTII-EVQPLEKINEVFDRML 324

Query: 324 SSQ 326
             Q
Sbjct: 325 KGQ 327

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  141 bits (359), Expect = 1e-39
 Identities = 83/361 (22%), Positives = 147/361 (40%), Gaps = 65/361 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            K ++  +      L+ +++  P+ K +E+LI V+ + +   D     G +P P      
Sbjct: 6   QKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLV 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-----------C-------------ALLGG----G 92
            G E +G ++ +G+NV  WK+GD             C             A L G    G
Sbjct: 64  GGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDG 123

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPGESFLVDFCS 149
            + +     A Q   +P G  L   A  P + C   TV+  +  +++L  G         
Sbjct: 124 SFQQYATADAVQAAHIPQGTDLAQVA--P-ILCAGITVYKAL-KSANLMAGH-------- 171

Query: 150 ISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVA 208
             +  + G + G+G+ A+Q  K  G RV    G E K  + + +G +V I++ K +D V 
Sbjct: 172 --WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVG 229

Query: 209 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 267
            V + T G G   +++   +    + +   +  +G   ++G   GAK   ++ +   K +
Sbjct: 230 AVLKATDG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSI 288

Query: 268 TVQ--AAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS 325
           ++     G R+ + E  AL             A G VK  I K + L    E ++ ME  
Sbjct: 289 SIVGSYVGNRADTRE--ALDFF----------ARGLVKSPI-KVVGLSTLPEIYEKMEKG 335

Query: 326 Q 326
           Q
Sbjct: 336 Q 336

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  140 bits (354), Expect = 6e-39
 Identities = 83/373 (22%), Positives = 140/373 (37%), Gaps = 70/373 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
           M+A+    P   E L L +   P+    E+L++VEA ++   D  + +  ++   +   P
Sbjct: 1   MRALAKLAPE--EGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------------CALLGG 91
              G E SG + +VG  V R +VGD V                             +   
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118

Query: 92  GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS 151
           GG+AE V VPA      P  +  + AA        V +          G+S L+      
Sbjct: 119 GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTV--YAGSGVSGKSVLI------ 170

Query: 152 YSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 210
                 G+  IG  A  + +  G   + V+  +  +LA  +     + +N   ED +  V
Sbjct: 171 -----TGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRL-VNPLEEDLLEVV 224

Query: 211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS-LFAKRLT 268
           +  TG  GV+V+L+  G  +   + L +L   G   I+G         ++   L  + +T
Sbjct: 225 RRVTGS-GVEVLLEFSGNEAAIHQGLMALIPGGEARILGI-PSDPIRFDLAGELVMRGIT 282

Query: 269 VQAAGLRSRSTENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEAHQLM 322
               G+  R                W      +  G+  + P++   LPL    EA  L+
Sbjct: 283 AF--GIAGRRL-----------WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLL 329

Query: 323 ESSQHIGKIMLVP 335
            S Q + K++L P
Sbjct: 330 ASGQAV-KVILDP 341

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  143 bits (362), Expect = 4e-38
 Identities = 84/335 (25%), Positives = 134/335 (40%), Gaps = 22/335 (6%)

Query: 6    ITQPGSPEVLQLQEV---EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPG 62
            +   G    ++               + L  V  T+LN  D +   G   P      +  
Sbjct: 1535 VLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLT 1594

Query: 63   LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122
             +C   +   G++      G +V  ++   G A  V +       VPS  +L++AA+ P 
Sbjct: 1595 RDCMLGMEFSGRDA----SGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPI 1650

Query: 123  VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG 182
            V  T + ++ +   + PGES L          +H GS G+G  AI +   +G RVF T G
Sbjct: 1651 VYTTAYYSLVVRGRMQPGESVL----------IHSGSGGVGQAAIAIALSRGCRVFTTVG 1700

Query: 183  SEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 238
            S EK A  +     L      N +   F   V   T GKGVD++L+ +     Q ++  L
Sbjct: 1701 SAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCL 1760

Query: 239  NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 298
               GR   IG    +       ++F K +T     L S   E  A    EV + +   I 
Sbjct: 1761 AQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATW-QEVSELLKAGIQ 1819

Query: 299  VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 333
             G V+P+     P  +   A + M   +HIGK+++
Sbjct: 1820 EGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVI 1854

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  133 bits (338), Expect = 1e-36
 Identities = 77/375 (20%), Positives = 137/375 (36%), Gaps = 73/375 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
             ++V+  PG    L+L+    P+   +EVL+++ +  +  +D      G         P
Sbjct: 8   NLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCA------------LLG---------------- 90
              G E SGT+  VG +V   K GD+V               +G                
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            G         A     +P  V+ ++ A    ++  + +       ++ G   LV     
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC--RRGGVTLGHKVLV----- 177

Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 209
                  G+  IG   + + K  G  +V VT  S  +L+  K++GAD+ +    E     
Sbjct: 178 ------CGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEI 231

Query: 210 VKEETG--GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR 266
            ++  G  G   +V ++C GA +  Q  + +    G L ++G  G   T + +     + 
Sbjct: 232 ARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGL-GSEMTTVPLLHAAIRE 290

Query: 267 LTVQAAGLRSRSTENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEAHQ 320
           + ++    R                N WP     +A     VKP++    PL +A EA +
Sbjct: 291 VDIKGV-FRYC--------------NTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFE 335

Query: 321 LMESSQHIGKIMLVP 335
             +    + KIML  
Sbjct: 336 TFKKGLGL-KIMLKC 349

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  128 bits (323), Expect = 2e-34
 Identities = 78/377 (20%), Positives = 139/377 (36%), Gaps = 74/377 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
             + V+ +      L+L++   P+ K+DEVL+++    +  +D      G         P
Sbjct: 5   NLSAVLYKQND---LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 61

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLG------- 90
              G E SGT++ VGKNV   K GD+V                     C  L        
Sbjct: 62  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 121

Query: 91  GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI 150
            G  A      A     +P  VSL++ A    ++  V +     + +  G + LV     
Sbjct: 122 DGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHAC--RRAGVQLGTTVLV----- 174

Query: 151 SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDFVA 208
                  G+  IG  ++   K  G  V  TA S  +L V K+ GADV   ++   E+  +
Sbjct: 175 ------IGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESS 228

Query: 209 RVKEETG--GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 265
            ++      G   +V +DC G        +      G L ++G  G     + + +  A+
Sbjct: 229 IIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGM-GSQMVTVPLVNACAR 287

Query: 266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEA- 318
            + +++   R                N +P     +A G+  VK ++     L +  +A 
Sbjct: 288 EIDIKSV-FRYC--------------NDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAF 332

Query: 319 HQLMESSQHIGKIMLVP 335
               + + +  K+M+  
Sbjct: 333 EAARKKADNTIKVMISC 349

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  127 bits (321), Expect = 6e-34
 Identities = 74/393 (18%), Positives = 131/393 (33%), Gaps = 90/393 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             A+V+ +   P  L  +E E   I    +L+++ +  +  +D    +G  P      P 
Sbjct: 18  AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV----PL 71

Query: 61  P---GLECSGTILSVGKNVS-----RWKVGDQVCALLG---------------------- 90
           P   G E +G ++ V            K GD +    G                      
Sbjct: 72  PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 131

Query: 91  --------------GGGYAEKVAV-PAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS 135
                          G Y+  + + P   VL V     L   A       T +       
Sbjct: 132 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYP 191

Query: 136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG 194
               G++ ++            G+  +G F + + +  G   V V AGS  +L + +++G
Sbjct: 192 ESFAGKTVVI-Q----------GAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG 240

Query: 195 ADVCIN---YKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLNIDGRLFIIGTQ 250
           AD+ +N      E+    + + T G+G D IL+  G +         L   G   + G  
Sbjct: 241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAG-V 299

Query: 251 GGAKTELNI---TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV---GKVK- 303
              +  +       L  K  T +   +   S             +    +++        
Sbjct: 300 AVPQDPVPFKVYEWLVLKNATFKGIWVSDTS-------------HFVKTVSITSRNYQLL 346

Query: 304 -PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
             +I   LPL EA +A +LMES +   K++L P
Sbjct: 347 SKLITHRLPLKEANKALELMESRE-ALKVILYP 378

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score =  110 bits (277), Expect = 2e-29
 Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 102 AGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG 161
           +  V+P+P  ++  +AA F     T W ++     LSPGE  L+          H  + G
Sbjct: 1   SDLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLI----------HSATGG 50

Query: 162 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 221
           +G  A+ + K  G R++ TAGS+ K  +   LG +   + ++ DF   + E T G GVDV
Sbjct: 51  VGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDV 110

Query: 222 ILDCMGASYFQRNLGSLNIDGRLFIIG 248
           +L+ +     QR +  L   GR   +G
Sbjct: 111 VLNSLAGEAIQRGVQILAPGGRFIELG 137

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  111 bits (279), Expect = 4e-28
 Identities = 51/385 (13%), Positives = 112/385 (29%), Gaps = 85/385 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASP 59
           MKAI + +    +   + E   P+ +  E L++     +   D  +   G    P+G   
Sbjct: 1   MKAIAVKRG--EDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58

Query: 60  Y-PGLECSGTILSVGKNVSRWKVGDQVCA------------------------------- 87
              G E  G +  V  N +  + GD V                                 
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 88  -LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE-VACTVW----STVFMTSHLSPGE 141
            +   G  +E    P   ++ +P   +  +     E ++ T      +    ++      
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQA--ELGFLIEPISITEKALEHAYASRSAFDWDPS 174

Query: 142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKDLGA 195
           S  V            G+  +G   + M K           +      +  + + ++L A
Sbjct: 175 SAFV-----------LGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDA 223

Query: 196 DVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK 254
               +   +  V  V +      +D I +  G   +  +++ +L  +G   ++G      
Sbjct: 224 TYVDS--RQTPVEDVPDVYE--QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWA 279

Query: 255 TELNI----TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYK 308
            E++       +      +   G  +   E+                 + K  ++ ++  
Sbjct: 280 FEVDAGAFHREMVLHNKALV--GSVNSHVEHFEAATVTF-------TKLPKWFLEDLVTG 330

Query: 309 YLPLCEAAEAHQLMESSQHIGKIML 333
             PL E   A    +      K  +
Sbjct: 331 VHPLSEFEAA---FDDDDTTIKTAI 352

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  111 bits (279), Expect = 4e-28
 Identities = 66/366 (18%), Positives = 130/366 (35%), Gaps = 76/366 (20%)

Query: 15  LQLQEVEDPQ-IKDDEVLIKVEATALNRADT-LQRKGSYPPPKGASPY-PGLECSGTILS 71
             L+ V+  + +K+ EV + V +T +  +D    + G   P      +  G E +G +++
Sbjct: 27  PSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIA 86

Query: 72  VGKNVSRWKVGDQVCA------------LLG----------------GGGYAEKVAVPAG 103
           V  +V   KVGD+V              L G                 G     V  PA 
Sbjct: 87  VHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAV 146

Query: 104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIG 163
               + + +S ++ A    ++  +       + +  G+  L+            G+  IG
Sbjct: 147 WCHKIGN-MSYENGAMLEPLSVALAGL--QRAGVRLGDPVLI-----------CGAGPIG 192

Query: 164 TFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK----TEDFVARVKEETGGKG 218
              +   K  G   + +T   E +L   K++  +V  +       E+   ++ E  GG  
Sbjct: 193 LITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIE 252

Query: 219 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSR 277
             V L+C G  S     + ++   G++F+IG  G  + ++       + + +Q    R  
Sbjct: 253 PAVALECTGVESSIAAAIWAVKFGGKVFVIGV-GKNEIQIPFMRASVREVDLQFQ-YRYC 310

Query: 278 STENKALIVSEVEKNVWPA----IAVGK--VKPVIYKYLPLCEAAEAHQLMES--SQHIG 329
                         N WP     +  G   +  ++    PL +A +A +      +  I 
Sbjct: 311 --------------NTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAI- 355

Query: 330 KIMLVP 335
           K+ +  
Sbjct: 356 KVQIQS 361

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  110 bits (277), Expect = 7e-28
 Identities = 55/394 (13%), Positives = 111/394 (28%), Gaps = 90/394 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEAT--------ALNRADTLQRKGSY 51
           MKAI++  P     +Q+++V++ ++    ++ I+             +N      +    
Sbjct: 1   MKAIIVKPPN--AGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNG-----KLTLS 53

Query: 52  PPPKGASPY-PGLECSGTILSVGKNVSRWKVGDQVCA----------------------- 87
             PKG      G E  G +            GD V                         
Sbjct: 54  TLPKGKDFLVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETG 110

Query: 88  ---LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE-VACTVW----------- 128
                G     G   E        ++ +P  +   D     + +A               
Sbjct: 111 EFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE--DIGILAQPLADIEKSIEEILEVQKR 168

Query: 129 -STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEK 186
                           LV            G+  IG     + +  G+           +
Sbjct: 169 VPVWTCDDGTLNCRKVLV-----------VGTGPIGVLFTLLFRTYGLEVWMANRREPTE 217

Query: 187 LAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYFQRNLGSLNIDGRL 244
           +             Y + +   ++K+  G    DVI+D  G   +     +  L  +G L
Sbjct: 218 VEQTVIEETKT-NYYNSSNGYDKLKDSVG--KFDVIIDATGADVNILGNVIPLLGRNGVL 274

Query: 245 FIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 301
            + G        L+   +  +     T+   GL +    +    V  +    W  +    
Sbjct: 275 GLFGFSTSGSVPLDYKTLQEIVHTNKTII--GLVNGQKPHFQQAVVHLAS--WKTLYPKA 330

Query: 302 VKPVIYKYLPLCEAAEAHQLMESSQHIG-KIMLV 334
            K +I K + + +  E  +++   +H   KI ++
Sbjct: 331 AKMLITKTVSINDEKELLKVLREKEHGEIKIRIL 364

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  109 bits (275), Expect = 1e-27
 Identities = 59/376 (15%), Positives = 118/376 (31%), Gaps = 66/376 (17%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK   +   G        E E P     + +++  A A   +D           +     
Sbjct: 1   MKGFAMLSIGKVGW---IEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMIL 57

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGG-------- 91
            G E  G ++ VG  V  +K GD+V                        +          
Sbjct: 58  -GHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVK 116

Query: 92  -GGYAEKVAVPAGQV--LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFC 148
            G + E   V    +    +P  + L+ A   P++  T +    + +++  G++  V   
Sbjct: 117 DGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAEL-ANIKLGDTVCV--- 172

Query: 149 SISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV 207
                    G   +G  ++      G  R+F     +    +  + GA   INYK  D V
Sbjct: 173 --------IGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIV 224

Query: 208 ARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNITSLF 263
            ++ + T GKGVD ++   G    F + +  +     +  +   G         +   + 
Sbjct: 225 EQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVG 284

Query: 264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VI-YKYLPLCEAAEAHQ 320
                +            + LI           +   +V P  ++ + +       +A  
Sbjct: 285 MGHKHIHGGLCPGGRLRMERLI---------DLVFYKRVDPSKLVTHVFRGFDNIEKAFM 335

Query: 321 LMESSQ-HIGKIMLVP 335
           LM+     + K +++ 
Sbjct: 336 LMKDKPKDLIKPVVIL 351

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 91.4 bits (228), Expect = 5e-21
 Identities = 73/328 (22%), Positives = 117/328 (35%), Gaps = 80/328 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           + A V    G+    +LQ ++  Q + DEVL+KV AT +   D + R   YP P      
Sbjct: 7   IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-----L 59

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQVCAL----------------------------- 88
           P   G E SG I ++G NV+  +VGD V                                
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 89  --------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV- 127
                                    +A          + V   V ++         C + 
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPL---GCGIQ 176

Query: 128 --WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSE 184
                      ++P  SF+  +          G+  +G  A+   K  G   +      E
Sbjct: 177 TGAGACINALKVTPASSFVT-W----------GAGAVGLSALLAAKVCGASIIIAVDIVE 225

Query: 185 EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN-LGSLNIDGR 243
            +L + K LGA   IN KT+D VA +KE T G GV+  L+  G+    +  + +L I G+
Sbjct: 226 SRLELAKQLGATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGK 284

Query: 244 LFIIG-TQGGAKTELNITSLFAKRLTVQ 270
           + ++G  Q G   + ++  L     T+ 
Sbjct: 285 IAVVGAPQLGTTAQFDVNDLLLGGKTIL 312

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 88.1 bits (219), Expect = 5e-20
 Identities = 59/279 (21%), Positives = 113/279 (40%), Gaps = 47/279 (16%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
           +A V+ +  +     +Q +    + + +VL++V  +++N  D L          +YP   
Sbjct: 5   QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF-- 62

Query: 56  GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLP 107
                PG++ +G ++S      R++ GD+V  +  G        GGY+E   +    ++P
Sbjct: 63  ----VPGIDLAGVVVS--SQHPRFREGDEV--IATGYEIGVTHFGGYSEYARLHGEWLVP 114

Query: 108 VPSGVSLKDAAAFPEVACTVWSTV--FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTF 165
           +P G++LK+A A      T   ++       L+P    ++         V G + G+G+ 
Sbjct: 115 LPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVL---------VTGATGGVGSL 165

Query: 166 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DV 221
           A+ M   +G  V  + G   +    + LGA   +    ED +     E      K     
Sbjct: 166 AVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLA--REDVM----AERIRPLDKQRWAA 219

Query: 222 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 260
            +D +G       L  +   G + + G  GGA+  +  T
Sbjct: 220 AVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAE--VPTT 256

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 87.4 bits (217), Expect = 8e-20
 Identities = 64/279 (22%), Positives = 109/279 (39%), Gaps = 47/279 (16%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPPK 55
           +A+   +      + ++ +    +  D VLIKV  + +N  D L  K        YP   
Sbjct: 6   QALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPL-- 63

Query: 56  GASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVLP 107
                 G++ +GT++S   N  R+  GD+V  +           GG +E  +VP   ++P
Sbjct: 64  ----ILGIDAAGTVVS--SNDPRFAEGDEV--IATSYELGVSRDGGLSEYASVPGDWLVP 115

Query: 108 VPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTF 165
           +P  +SLK+A  +     T          + LSP +  ++         V G + G+G  
Sbjct: 116 LPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVL---------VTGATGGVGGI 166

Query: 166 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-DV 221
           A+ M   +G  V  + G+ E     K LGA   I+   ED      + T     K     
Sbjct: 167 AVSMLNKRGYDVVASTGNREAADYLKQLGASEVIS--REDVY----DGTLKALSKQQWQG 220

Query: 222 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT 260
            +D +G       L  +   G + + G  GG +  +  T
Sbjct: 221 AVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGE--VPAT 257

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 61/279 (21%), Positives = 112/279 (40%), Gaps = 47/279 (16%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG------SYPPP 54
           M+A+++ Q     +  +Q +E+ Q+   +V + V  ++LN  D L   G       +P  
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFP-- 58

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG--------GGYAEKVAVPAGQVL 106
                 PG++ +GT+ +      R+  G +V  LL G        GG AE+  V    ++
Sbjct: 59  ----MIPGIDFAGTVHA--SEDPRFHAGQEV--LLTGWGVGENHWGGLAERARVKGDWLV 110

Query: 107 PVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGESFLVDFCSISYSDVHGGSSGIGT 164
            +P+G+S ++A        T    V     + + P +  +V         V G S G+G+
Sbjct: 111 ALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVV---------VTGASGGVGS 161

Query: 165 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG---GKGV-D 220
            A+ +    G +V   +G E      K LGA+  ++   ++F             K +  
Sbjct: 162 TAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILS--RDEF------AESRPLEKQLWA 213

Query: 221 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 259
             +D +G     + L  +N  G +   G  GG      +
Sbjct: 214 GAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFALPTTV 252

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 71/417 (17%), Positives = 134/417 (32%), Gaps = 110/417 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-------DEVLIKVEATALNRADTLQRKGSYPP 53
            + +V    G  EV   Q+++ P+++D         V++KV +T +  +D    +G    
Sbjct: 3   NRGVVYLGSGKVEV---QKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 59

Query: 54  PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA-------------------------- 87
             G     G E +G ++  G++V   ++GD V                            
Sbjct: 60  QVGLVL--GHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPA 117

Query: 88  ---------LLGG--GGYAEKVAVPAGQV--LPVPSGVS----LKDAAAFPEVACTVWST 130
                     +G   GG AE V VP      L +P        ++D     ++  T +  
Sbjct: 118 RAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHG 177

Query: 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV 189
             +T+ + PG +  V            G+  +G  A    +  G   V V   +  +LA 
Sbjct: 178 A-VTAGVGPGSTVYV-----------AGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 225

Query: 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG---------ASYFQRNLGSLN- 239
            K  G ++           ++    G   VD  +D +G          +  +     LN 
Sbjct: 226 AKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNS 285

Query: 240 -ID-----GRLFIIG------------TQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN 281
            +      G++ I G                    +     +AK  +    G       N
Sbjct: 286 LMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFH-TGQTPVMKYN 344

Query: 282 KALIVSEVEKNVWPAIAVGKVKP---VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
           +AL+          AI   ++     V  + + L +A   +   ++     K ++ P
Sbjct: 345 RALM---------QAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPK-KFVIDP 391

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 71/417 (17%), Positives = 134/417 (32%), Gaps = 110/417 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDD------EVLIKVEATALNRADTLQRKGSYPPP 54
            K++V        V   + V  P+++ +       V++KV +T +  +D    +G +  P
Sbjct: 3   NKSVVYHGTRDLRV---ETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVP 59

Query: 55  KGASPYPGLECSGTILSVGKNVSRWKVGDQVCA--------------------------- 87
           KG     G E +G ++  G +V    +GD V                             
Sbjct: 60  KGHVL--GHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNP 117

Query: 88  ---------LLGG--GGYAEKVAVPAGQV--LPVPSGVS----LKDAAAFPEVACTVWST 130
                     L G  GG AE V VP      L           +KD     ++  T +  
Sbjct: 118 DADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHG 177

Query: 131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV 189
                 + PG    +            G+  +G  A    +  G   V V   + E+L +
Sbjct: 178 CVSA-GVKPGSHVYI-----------AGAGPVGRCAAAGARLLGAACVIVGDQNPERLKL 225

Query: 190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--------ASYFQRNLGSLN-- 239
             D G +      +     ++ +  G   VD  +D +G         +  +   G+LN  
Sbjct: 226 LSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL 285

Query: 240 ID-----GRLFIIGTQGGA------------KTELNITSLFAKRLTVQAAGLRSRSTENK 282
            D     G + I G   G+            +  L+   ++ K + +   G+   +  N+
Sbjct: 286 FDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIM-TGMAPVTNYNR 344

Query: 283 ALIVSEVEKNVWPAIAVGKVKP----VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 335
            L           AI   ++      +  + + L +A + +   +      K ++ P
Sbjct: 345 HLT---------EAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPA-KFVIDP 391

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 76.8 bits (190), Expect = 5e-16
 Identities = 57/287 (19%), Positives = 100/287 (34%), Gaps = 63/287 (21%)

Query: 11  SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTIL 70
           +    +L+ VE P +K+ EVL++    ++   D   R  +    K  +   G        
Sbjct: 22  TQSDFELKTVELPPLKNGEVLLEALFLSV---DPYMR-IASKRLKEGAVMMGQ------- 70

Query: 71  SVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPV----PSGVSLKDA----- 117
            V +      S +  G  V   L   G+          +  +    P  + L  A     
Sbjct: 71  QVARVVESKNSAFPAGSIV---LAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIG 127

Query: 118 -------AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG-IGTFAIQM 169
                      EV             +  GE+ LV             ++G +G+   Q+
Sbjct: 128 MPGLTAYFGLLEVC-----------GVKGGETVLV-----------SAAAGAVGSVVGQI 165

Query: 170 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
            K +G +V   AGS+EK+A  K +G D   NYKT + +    ++    G D   D +G  
Sbjct: 166 AKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE 225

Query: 230 YFQRNLGSLNIDGRLFIIG------TQGGAKTELNITSLFAKRLTVQ 270
           +    L  +   G++ I G               +  S+  K+L ++
Sbjct: 226 FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIE 272

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 66/284 (23%), Positives = 95/284 (33%), Gaps = 78/284 (27%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  + G P  ++  EV  P  K  EV IK+ ATA+   D     G+ P       +
Sbjct: 7   CKAAVAWEAGKPLSIEEIEVAPP--KAHEVRIKIIATAVCHTDAYTLSGADPEG----CF 60

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G   +G + SVG+ V++ K GD V             C                  
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
                              +G   ++E   V    V  +     L          C +  
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLL---GCGIST 177

Query: 128 -WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 185
            +     T+ L PG    V F          G  G+G   I   K  G  R+     +++
Sbjct: 178 GYGAAVNTAKLEPGSVCAV-F----------GLGGVGLAVIMGCKVAGASRIIGVDINKD 226

Query: 186 KLAVCKDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 227
           K A  K+ GA  CIN +         + E T G GVD   +C+G
Sbjct: 227 KFARAKEFGATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 65/311 (20%), Positives = 108/311 (34%), Gaps = 68/311 (21%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA+       P  L+  ++   +   ++V I++    +  +D  Q +  +      + YP
Sbjct: 24  KAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW----AGTVYP 77

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG----- 91
              G E  G +++VG  V ++  GD V                      C  + G     
Sbjct: 78  CVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSP 137

Query: 92  ---------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSP 139
                    GGY++++ V    VL +        A A P + C   T +S         P
Sbjct: 138 TPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA-P-LLCAGITTYSP-LRHWQAGP 194

Query: 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199
           G+   V            G  G+G   I++    G  V     SE K    K LGAD  +
Sbjct: 195 GKKVGV-----------VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVV 243

Query: 200 NYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELN 258
           N +  D +A        K  D IL+ + A +        L  DG + ++G          
Sbjct: 244 NSRNADEMAAHL-----KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPE 298

Query: 259 ITSLFAKRLTV 269
           + +L  KR  +
Sbjct: 299 VFNLIMKRRAI 309

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 66/288 (22%), Positives = 97/288 (33%), Gaps = 83/288 (28%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA +  + GSP  L ++E+E    K  EV I+V AT +   D                +
Sbjct: 9   CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA-----LF 61

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G EC+G + SVG  V+ +K GD+V             C                  
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 88  ----------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125
                                  +G   +++   V    +  V    +L+         C
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI---GC 178

Query: 126 TV---WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTA 181
                +     T+ ++PG +  V F          G   +G  AI   K  G  R+    
Sbjct: 179 GFSSGYGAAINTAKVTPGSTCAV-F----------GLGCVGLSAIIGCKIAGASRIIAID 227

Query: 182 GSEEKLAVCKDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 227
            + EK    K LGA  C+N +  D      + E T G GVD  LDC G
Sbjct: 228 INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAG-GVDYSLDCAG 274

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 58/284 (20%), Positives = 98/284 (34%), Gaps = 79/284 (27%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V+ +   P    ++EVE    K  EV IK+ AT + R+D     G+   P      
Sbjct: 9   CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-----L 61

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E +G + S+G+ V+  + GD+V             C                  
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
                              LG   +++   V    V  + +   L+         C    
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLI---GCGFST 178

Query: 128 -WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 185
            + +    + ++ G +  V F          G  G+G   I   K  G  R+     +++
Sbjct: 179 GYGSAVKVAKVTQGSTCAV-F----------GLGGVGLSVIMGCKAAGAARIIGVDINKD 227

Query: 186 KLAVCKDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 227
           K A  K++GA  C+N +         + E + G GVD   + +G
Sbjct: 228 KFAKAKEVGATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEVIG 270

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 63/311 (20%), Positives = 111/311 (35%), Gaps = 69/311 (22%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
                  P     L        +   ++V I++    +   D  Q K       G S YP
Sbjct: 11  TGWAARDPSGI--LSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDL----GMSNYP 64

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV----------------------CALLGG----- 91
              G E  G ++ VG +VS++ VGD V                      C          
Sbjct: 65  MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124

Query: 92  --------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPG 140
                   GG+A+   V    V+ +P G++++ AA  P + C   TV+S +       PG
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA--P-LLCAGVTVYSPLSHFGLKQPG 181

Query: 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCI 199
               +            G  G+G   +++ K  G  V V + S +K     +DLGAD  +
Sbjct: 182 LRGGI-----------LGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV 230

Query: 200 NYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELN 258
               +  ++ + +      +D ++D +   +  +  L  L +DG+L ++G       +  
Sbjct: 231 IGSDQAKMSELADS-----LDYVIDTVPVHHALEPYLSLLKLDGKLILMG-VINNPLQFL 284

Query: 259 ITSLFAKRLTV 269
              L   R  +
Sbjct: 285 TPLLMLGRKVI 295

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 69.2 bits (170), Expect = 2e-13
 Identities = 65/283 (22%), Positives = 97/283 (34%), Gaps = 80/283 (28%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           KA V  +P  P  L+   V  P  K  EV IK+ A+ +  +D+   K   P       +P
Sbjct: 11  KAAVAWEPHKPLSLETITVAPP--KAHEVRIKILASGICGSDSSVLKEIIPS-----KFP 63

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-------------CA------------------ 87
              G E  G + S+G  V+  K GD+V             C                   
Sbjct: 64  VILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGL 123

Query: 88  -----------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV--- 127
                            L+G   + E   V    V  +     L ++       C     
Sbjct: 124 MADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPL-ESCLI---GCGFATG 179

Query: 128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEK 186
           +     T+ ++PG +  V F          G  G+G  AI   K  G  R+      ++K
Sbjct: 180 YGAAVNTAKVTPGSTCAV-F----------GLGGVGFSAIVGCKAAGASRIIGVGTHKDK 228

Query: 187 LAVCKDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 227
                +LGA  C+N K  D      + E+T G GVD  ++C G
Sbjct: 229 FPKAIELGATECLNPKDYDKPIYEVICEKTNG-GVDYAVECAG 270

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 68.4 bits (168), Expect = 3e-13
 Identities = 49/285 (17%), Positives = 95/285 (33%), Gaps = 43/285 (15%)

Query: 11  SPEVLQLQEVEDPQ-IKDDEVLIKVEATAL-----NRADTLQRKGSYPPPKGASPYPGLE 64
             E  +++EV  P  I + +V ++    ++      R +         P + +    G  
Sbjct: 25  VAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG- 83

Query: 65  CSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
                  +G       +    GD V +      +  KV +    +  V   +     + F
Sbjct: 84  ------GIGIIEESKHTNLTKGDFVTSFYWP--WQTKVILDGNSLEKVDPQLVDGHLSYF 135

Query: 121 PEVA----CTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-V 175
                    T    +    H++ G +  +         V G +   G+ A Q+G   G  
Sbjct: 136 LGAIGMPGLTSLIGIQEKGHITAGSNKTMV--------VSGAAGACGSVAGQIGHFLGCS 187

Query: 176 RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN 234
           RV    G+ EK  +    LG D  INYK ++   +++E     GVDV  D +G +     
Sbjct: 188 RVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTV 246

Query: 235 LGSLNIDGRLFIIGT---------QGGAKTELNITSLFAKRLTVQ 270
           +  +N +  + + G               +         + +T +
Sbjct: 247 ISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRE 291

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 52/285 (18%), Positives = 93/285 (32%), Gaps = 46/285 (16%)

Query: 11  SPEVLQLQEVEDPQ---IKDDEVLIKVEATAL---NRA---DTLQRKGSYPPP-KGASPY 60
           +                   + VL+K    +     R           +         P 
Sbjct: 19  TESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPI 78

Query: 61  PGLECSGTILSVGK----NVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            G         V +        +K GD +  ++    Y+    +         + V L  
Sbjct: 79  QGY-------GVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSY 131

Query: 117 A---AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSG-IGTFAIQMGKC 172
                  P +  T ++  +       GE+  V             +SG +G    Q+ K 
Sbjct: 132 YTGLLGMPGM--TAYAGFYEVCSPKEGETVYV-----------SAASGAVGQLVGQLAKM 178

Query: 173 QGVRVFVTAGSEEKLAVCKD-LGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASY 230
            G  V  +AGS+EK+ + K   G D   NYK E D  A +K      G+D+  + +G   
Sbjct: 179 MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF-PNGIDIYFENVGGKM 237

Query: 231 FQRNLGSLNIDGRLFIIGT-----QGGAKTELNITSLFAKRLTVQ 270
               L ++N+ GR+ + G          +   N++++  KR  +Q
Sbjct: 238 LDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ 282

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 57/291 (19%), Positives = 91/291 (31%), Gaps = 75/291 (25%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           K   I         +  +     +   +VLI +    +  +D       +        YP
Sbjct: 6   KGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEW----KEGIYP 59

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-----------CA-------------------- 87
              G E +G I  VGK V ++K+GD V           C                     
Sbjct: 60  MIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCL 119

Query: 88  --LLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLS 138
                     GGY+  + V    V+ V     L+  A  P + C   T +S     S ++
Sbjct: 120 DSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA--P-LLCAGITTYSP-LKFSKVT 175

Query: 139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC 198
            G    V            G  G+G+ A++     G  V V A +E K      +G    
Sbjct: 176 KGTKVGV-----------AGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVK-- 222

Query: 199 INYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG 248
                  F    K+      +D I+  +   Y  +  L  L  +G L ++G
Sbjct: 223 ------HFYTDPKQCKE--ELDFIISTIPTHYDLKDYLKLLTYNGDLALVG 265

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 54/284 (19%), Positives = 88/284 (30%), Gaps = 78/284 (27%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  +   P  L ++E+E      +E+ IK+ AT +   D                +
Sbjct: 9   CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD----GF 62

Query: 61  P---GLECSGTILSVGKNVSRWKVGDQV-------------CA----------------- 87
           P   G E +G + SVG  V+ ++ G++V             C                  
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 88  ------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTV-- 127
                              LG   +++   V    V  +     L          C V  
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLL---GCGVST 179

Query: 128 -WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE 185
            +     T+ + PG +  V F          G   +G  A+      G  R+     + +
Sbjct: 180 GFGAAVNTAKVEPGSTCAV-F----------GLGAVGLAAVMGCHSAGAKRIIAVDLNPD 228

Query: 186 KLAVCKDLGADVCINYKTED--FVARVKEETGGKGVDVILDCMG 227
           K    K  GA   +N           + + T G GVD  L+C+G
Sbjct: 229 KFEKAKVFGATDFVNPNDHSEPISQVLSKMTNG-GVDFSLECVG 271

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 65/311 (20%), Positives = 102/311 (32%), Gaps = 69/311 (22%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
                        L           +++V  KV    +  +D    K  +    G S YP
Sbjct: 18  FGWAARDQSGH--LSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDW----GFSMYP 71

Query: 62  ---GLECSGTILSVGKNVSRWKVGDQV-----------CA-------------------- 87
              G E  G +  VG  V +  VGD+V           C                     
Sbjct: 72  LVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASI 131

Query: 88  -LLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSPG 140
              G    GGY+  +      ++  P  + L   A  P + C   TV+S +       PG
Sbjct: 132 YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGA--P-LLCAGITVYSPLKYFGLDEPG 188

Query: 141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGADVCI 199
           +   +            G  G+G  A++  K  G +V V + S  K     K+ GAD  +
Sbjct: 189 KHIGI-----------VGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFL 237

Query: 200 NYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELN 258
             + ++ +           +D I+D + A +      G L   G+L ++G       EL 
Sbjct: 238 VSRDQEQMQAAAGT-----LDGIIDTVSAVHPLLPLFGLLKSHGKLILVG-APEKPLELP 291

Query: 259 ITSLFAKRLTV 269
             SL A R  V
Sbjct: 292 AFSLIAGRKIV 302

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 62.2 bits (152), Expect = 5e-11
 Identities = 63/317 (19%), Positives = 109/317 (34%), Gaps = 77/317 (24%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
           + I I      +  +  + +     D ++ IK+EA  +  +D     G +    G    P
Sbjct: 8   EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW----GNMKMP 63

Query: 62  ---GLECSGTILSVGKNV-SRWKVGDQV----------------------CALLGG---- 91
              G E  G ++ +G    S  KVG +V                      C         
Sbjct: 64  LVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ 123

Query: 92  ---------GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC---TVWSTVFMTSHLSP 139
                    GGYA  V V    V+P+P  +    AA  P + C   TV+S   + +   P
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA--P-LLCGGLTVYSP-LVRNGCGP 179

Query: 140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI 199
           G+   +            G  GIG+    + K  G   +V + S  K      +GAD   
Sbjct: 180 GKKVGI-----------VGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGAD--- 225

Query: 200 NYKTEDFVARVKEETGGKGV----DVILDCMGASY---FQRNLGSLNIDGRLFIIGTQGG 252
                 ++A ++E   G+      D+I+ C  +     F     ++ + GR+  I     
Sbjct: 226 -----HYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSIS-IPE 279

Query: 253 AKTELNITSLFAKRLTV 269
               L++     K +++
Sbjct: 280 QHEMLSLKPYGLKAVSI 296

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.91
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.79
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.56
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.5
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.43
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.43
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.36
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.16
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	97.96
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.78
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.75
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.67
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.56
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.49
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.47
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.4
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.37
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.33
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.18
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.12
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.11
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.08
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.07
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.07
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.95
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.93
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.92
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.92
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.91
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.87
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	96.86
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.84
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.76
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.76
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.76
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.75
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.74
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.73
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.72
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.69
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.69
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.66
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.64
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.63
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.62
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.62
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.62
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.62
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.61
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.61
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.6
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.59
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.57
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.55
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.55
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.54
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.54
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.54
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.52
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.52
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.49
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.49
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.49
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.48
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.48
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.47
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.47
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.46
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.45
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.44
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.44
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.43
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.43
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.43
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.43
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.42
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.42
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.42
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.42
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.42
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.41
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.41
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.41
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.4
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.4
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.4
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.39
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.39
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.38
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.37
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.36
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.35
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.33
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.32
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.32
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.31
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.31
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.31
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.3
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.3
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.3
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.29
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.28
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.28
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.28
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.27
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.27
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.26
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.26
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.26
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.26
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.25
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.25
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.24
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.23
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.23
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.23
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.23
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.23
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.22
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.22
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.21
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.21
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.21
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.2
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.19
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.19
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.19
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.17
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.17
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.14
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.14
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.14
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.13
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.13
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.13
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.12
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.12
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.12
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.12
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.11
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.11
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.11
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.11
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.11
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.1
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.09
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.09
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.09
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.09
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.09
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.08
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.06
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.06
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.06
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.06
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.05
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.04
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.02
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.02
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.01
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.01
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.01
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	95.99
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.98
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.96
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.96
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	95.95
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	95.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.95
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	95.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.94
1xhl_A	297	Short-chain dehydrogenase/reductase family member	95.94
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.94
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.93
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	95.93
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	95.93
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.9
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	95.89
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.89
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.88
1spx_A	278	Short-chain reductase family member (5L265); paral	95.88
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.85
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.84
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.84
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.83
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	95.8
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.8
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.79
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.79
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.77
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.76
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.76
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.75
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.73
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.72
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.71
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.71
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.7
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.7
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.7
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	95.7
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	95.68
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.68
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.67
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.6
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.6
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.58
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.58
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.56
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	95.55
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.54
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	95.54
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	95.53
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.52
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.51
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.51
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	95.5
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	95.48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.47
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.47
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.47
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.46
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.45
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	95.45
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.44
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	95.42
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.41
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.4
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.4
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.4
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.4
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.4
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.39
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	95.38
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.37
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.35
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.35
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.34
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.34
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.33
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.32
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.32
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.32
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.32
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.3
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.29
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	95.29
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.29
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.26
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.26
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.26
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.26
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.24
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.24
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.24
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.21
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.21
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.16
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.16
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.16
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.15
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.15
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.14
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.14
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.11
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.1
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.1
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.09
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.08
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.08
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.07
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.05
2b25_A	336	Hypothetical protein; structural genomics, methyl	95.02
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.02
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.02
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.01
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.01
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	94.97
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.97
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	94.96
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	94.95
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	94.94
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	94.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	94.82
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	94.79
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.78
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	94.75
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	94.74
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	94.72
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	94.72
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	94.71
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	94.71
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	94.69
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	94.65
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	94.65
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.62
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	94.61
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	94.59
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	94.59
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	94.57
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.55
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.53
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	94.53
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	94.52
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	94.52
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	94.51
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	94.51
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	94.48
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	94.48
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	94.47
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	94.47
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	94.47
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	94.47
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	94.44
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.43
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	94.43
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	94.4
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	94.4
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	94.38
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	94.38
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.38
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	94.35
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	94.27
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	94.27
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	94.21
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	94.2
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.2
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	94.19
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	94.17
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.16
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	94.16
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	94.15
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	94.14
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	94.13
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	94.13
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.12
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.08
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	94.07
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.06
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	94.05
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	94.04
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	94.04
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	94.03
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	93.99
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	93.98
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	93.98
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	93.96
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	93.95
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	93.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	93.88
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	93.87
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	93.87
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	93.86
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	93.85
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	93.84
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	93.83
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	93.81
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	93.78
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	93.78
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	93.76
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	93.75
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	93.71
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	93.71
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	93.71
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	93.69
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	93.68
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	93.63
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	93.62
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	93.6
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	93.57
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	93.54
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	93.53
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	93.5
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	93.47
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	93.46
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	93.45
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	93.45
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	93.42
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	93.4
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	93.39
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	93.34
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	93.34
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	93.31
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	93.26
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	93.2
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	93.19
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	93.15
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	93.15
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	93.13
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	93.1
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	93.06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	93.03
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	93.03
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	93.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	92.98
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	92.98
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	92.98
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	92.95
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	92.93
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	92.93
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	92.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	92.88
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	92.88
3i9f_A	170	Putative type 11 methyltransferase; structural gen	92.88
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	92.87
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	92.87
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	92.86
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	92.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	92.82
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	92.82
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	92.77
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	92.74
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	92.73
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	92.71
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	92.7
3thr_A	293	Glycine N-methyltransferase; GNMT, folate, methylt	92.68
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	92.67
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	92.67
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	92.65
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	92.6
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	92.59

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=4.1e-57  Score=416.19  Aligned_cols=324  Identities=48%  Similarity=0.810  Sum_probs=301.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+|+|+.+++++.+.|+|+++||+|||.+++||++|++.+.|.++.+..+|.++|||++|+|+++|+++++|+
T Consensus        29 MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~  108 (353)
T 4dup_A           29 MRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYA  108 (353)
T ss_dssp             EEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSCC
T ss_pred             eeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCCC
Confidence            89999999998999999999999999999999999999999999999998877667899999999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++..+|+|+||++++++.++++|+++++++||+++++++|||+++.+.+++++|++|||          +||+|
T Consensus       109 vGdrV~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~Gg~g  178 (353)
T 4dup_A          109 VGDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLI----------HGGTS  178 (353)
T ss_dssp             TTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEE----------SSTTS
T ss_pred             CCCEEEEecCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEE----------EcCCC
Confidence            99999999889999999999999999999999999999999999999999988899999999999          99999


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      ++|++++|+|+..|++|+++++++++++.++++|++.++|+.+.++.+.+++.+ +.++|++|||+|+..+..++++|++
T Consensus       179 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~~~~~~~~~l~~  257 (353)
T 4dup_A          179 GIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAET-GQGVDIILDMIGAAYFERNIASLAK  257 (353)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHH-SSCEEEEEESCCGGGHHHHHHTEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHh-CCCceEEEECCCHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999998 6799999999999989999999999


Q ss_pred             CCEEEEEeccCCCccc-cChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHH
Q 019790          241 DGRLFIIGTQGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAH  319 (335)
Q Consensus       241 ~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~  319 (335)
                      +|+++.+|...+.... ++...++.+++++.++.+......+.....++.++.+++++++|+++++++++|+++++++|+
T Consensus       258 ~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~  337 (353)
T 4dup_A          258 DGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAH  337 (353)
T ss_dssp             EEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHH
T ss_pred             CCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcceEEeHHHHHHHH
Confidence            9999999977655434 777788899999999988776655555556666888999999999999999999999999999


Q ss_pred             HHHHhCCCceeEEEeC
Q 019790          320 QLMESSQHIGKIMLVP  335 (335)
Q Consensus       320 ~~~~~~~~~gkvvi~~  335 (335)
                      +.+.+++..||+|+++
T Consensus       338 ~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          338 RLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHTCCSSEEEEEC
T ss_pred             HHHHhCCCCceEEEeC
Confidence            9999999999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=8e-56  Score=405.91  Aligned_cols=321  Identities=30%  Similarity=0.465  Sum_probs=285.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++ |+
T Consensus        22 MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~~  100 (342)
T 4eye_A           22 MKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-IK  100 (342)
T ss_dssp             EEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-CC
T ss_pred             eEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-CC
Confidence            89999999998988999999999999999999999999999999999998766567799999999999999999999 99


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+..++++|++|||          +|++|
T Consensus       101 vGDrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~Gasg  170 (342)
T 4eye_A          101 PGDRVMAFNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLV----------LGAAG  170 (342)
T ss_dssp             TTCEEEEECSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEE----------SSTTS
T ss_pred             CCCEEEEecCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE----------ECCCC
Confidence            99999999888999999999999999999999999999999999999999988899999999999          99889


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      ++|++++|+|+.+|++|+++++++++++.++++|++.++++. .++.+.+++.+++.++|++|||+|+..+..+++++++
T Consensus       171 ~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~~~~~~~~~l~~  249 (342)
T 4eye_A          171 GIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGPAFDDAVRTLAS  249 (342)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC--CHHHHHHTEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchhHHHHHHHhhcC
Confidence            999999999999999999999999999999999999999988 8889999999988899999999999889999999999


Q ss_pred             CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790          241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ  320 (335)
Q Consensus       241 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~  320 (335)
                      +|+++.+|...+....++...++.+++++.++.+..+... ......+.++.+++++++| ++++++++|+++++++|++
T Consensus       250 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~-~~~~~~~~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~  327 (342)
T 4eye_A          250 EGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRT-HADYLYETQAGLEKLVAEG-MRPPVSARIPLSEGRQALQ  327 (342)
T ss_dssp             EEEEEEC----------CCCCGGGTTCEEEECCHHHHHHH-CTTHHHHHHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHH
T ss_pred             CCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhc-CHHHHHHHHHHHHHHHHcC-CCCCcceEEeHHHHHHHHH
Confidence            9999999876654445666667889999999876543211 1223445677799999999 9999999999999999999


Q ss_pred             HHHhCCCceeEEEeC
Q 019790          321 LMESSQHIGKIMLVP  335 (335)
Q Consensus       321 ~~~~~~~~gkvvi~~  335 (335)
                      .+.+++..||+|++|
T Consensus       328 ~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          328 DFADGKVYGKMVLVP  342 (342)
T ss_dssp             HHHTTCCCSEEEEEC
T ss_pred             HHHhCCCCceEEEeC
Confidence            999999999999987

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.5e-55  Score=400.03  Aligned_cols=322  Identities=30%  Similarity=0.412  Sum_probs=291.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+|+++.+++++.+.|+|++|||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~   80 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA-PFLPSGLGAEGAGVVEAVGDEVTRFK   80 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCC
Confidence            89999999999999999999999999999999999999999999999998765 35799999999999999999999999


Q ss_pred             CCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      +||+|+... .+|+|+||++++++.++++|+++++++||+++..++|||+++.+..++++|++|||          +|++
T Consensus        81 ~GdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~Ga~  150 (325)
T 3jyn_A           81 VGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILF----------HAAA  150 (325)
T ss_dssp             TTCEEEESSSSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------SSTT
T ss_pred             CCCEEEEecCCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEE----------EcCC
Confidence            999999875 47999999999999999999999999999999999999999988899999999999          9999


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      |++|++++|+|+..|++|+++++++++++.++++|++.++|+.+.++.+.+++.+++.++|++|||+|+..+..++++++
T Consensus       151 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~  230 (325)
T 3jyn_A          151 GGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVA  230 (325)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTTEE
T ss_pred             cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999889999999999988999999999


Q ss_pred             CCCEEEEEeccCCCccccChhHHhhc-ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHH
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA  318 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a  318 (335)
                      ++|+++.+|...+....++...+..+ .+++.+..+..+..  ....+.+.++.+++++.+|++++.++++|+++++++|
T Consensus       231 ~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A  308 (325)
T 3jyn_A          231 PRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYAN--NAQNLQTMADELFDMLASGKLKVDGIEQYALKDAAKA  308 (325)
T ss_dssp             EEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSC--STTHHHHHHHHHHHHHHTTSSCCCCCEEEEGGGHHHH
T ss_pred             CCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecC--CHHHHHHHHHHHHHHHHCCCeeCccccEEcHHHHHHH
Confidence            99999999987655446777777766 66776654433211  1123455667799999999999999999999999999


Q ss_pred             HHHHHhCCCceeEEEeC
Q 019790          319 HQLMESSQHIGKIMLVP  335 (335)
Q Consensus       319 ~~~~~~~~~~gkvvi~~  335 (335)
                      ++.+.+++..||+|+.|
T Consensus       309 ~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          309 QIELSARRTTGSTILIP  325 (325)
T ss_dssp             HHHHHTTCCCSCEEEEC
T ss_pred             HHHHHcCCCCceEEEeC
Confidence            99999999999999987

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.3e-54  Score=399.70  Aligned_cols=325  Identities=41%  Similarity=0.711  Sum_probs=291.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCC-CCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV-SRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~-~~~   79 (335)
                      |||+++..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++ ++|
T Consensus        23 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~  102 (354)
T 2j8z_A           23 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHW  102 (354)
T ss_dssp             EEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--CC
T ss_pred             eeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCCC
Confidence            8999999999888899999999999999999999999999999999999776555678999999999999999999 999


Q ss_pred             CCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      ++||+|+++..+|+|+||++++++.++++|+++++++||+++++++|||+++.+..++++|+++||          +|++
T Consensus       103 ~vGdrV~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV----------~Ga~  172 (354)
T 2j8z_A          103 KIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLI----------HAGL  172 (354)
T ss_dssp             CTTCEEEEECSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEE----------SSTT
T ss_pred             CCCCEEEEecCCCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEE----------ECCc
Confidence            999999999888999999999999999999999999999999999999999988889999999999          9999


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      |++|++++|+++..|++|+++++++++.+.++++|++.++|+.+.++.+.+.+.+.+.++|++|||+|+..+..++++|+
T Consensus       173 ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~~~~~~~~~l~  252 (354)
T 2j8z_A          173 SGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLA  252 (354)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGGGHHHHHHHEE
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCchHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999988888889998888778999999999988889999999


Q ss_pred             CCCEEEEEeccCCCccccCh-hHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCC---ccccccccccchhhH
Q 019790          240 IDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG---KVKPVIYKYLPLCEA  315 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~l~~~  315 (335)
                      ++|+++.+|...+....++. ..++.+++++.++.+................+.+++++.+|   +++++++++|+|+++
T Consensus       253 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~  332 (354)
T 2j8z_A          253 LDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEI  332 (354)
T ss_dssp             EEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGH
T ss_pred             CCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHH
Confidence            99999999976654445677 77888999999987765433222233344556688999999   899999999999999


Q ss_pred             HHHHHHHHhCCCceeEEEeC
Q 019790          316 AEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       316 ~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++|++.+.+++..||+|+++
T Consensus       333 ~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          333 QEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             HHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHhCCCCceEEEec
Confidence            99999999888889999875

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.2e-54  Score=395.32  Aligned_cols=320  Identities=29%  Similarity=0.418  Sum_probs=292.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++++.+++++.+.|+|++|||+|||.++|||++|++.+.|.++.  .+|.++|||++|+|+++|+++++|+
T Consensus         9 mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~P~i~G~e~~G~V~~vG~~v~~~~   86 (334)
T 3qwb_A            9 QKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPC--EKPYVLGREASGTVVAKGKGVTNFE   86 (334)
T ss_dssp             EEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCC--CSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCccccceEEEEEEECCCCCCCC
Confidence            89999999999889999999999999999999999999999999999997753  3689999999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEec-CCceEeCCCCCChhh---hccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVP-AGQVLPVPSGVSLKD---AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH  156 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~-~~~~~~~p~~~~~~~---aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~  156 (335)
                      +||+|+++. +|+|+||++++ .+.++++|+++++++   +++++..++|||+++.+..++++|++|||          +
T Consensus        87 ~GdrV~~~~-~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV----------~  155 (334)
T 3qwb_A           87 VGDQVAYIS-NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLL----------F  155 (334)
T ss_dssp             TTCEEEEEC-SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------S
T ss_pred             CCCEEEEee-CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEE----------E
Confidence            999999885 69999999999 999999999999999   88899999999999988889999999999          9


Q ss_pred             cccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhc
Q 019790          157 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG  236 (335)
Q Consensus       157 g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (335)
                      |++|++|++++|+|+..|++|+++++++++++.++++|++.++|+.+.++.+.+.+.+++.++|++|||+|+..+..+++
T Consensus       156 Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~  235 (334)
T 3qwb_A          156 AAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLA  235 (334)
T ss_dssp             STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGGGHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999998889999999999988999999


Q ss_pred             cccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHH
Q 019790          237 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAA  316 (335)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~  316 (335)
                      +|+++|+++.+|...+....++...++.+++++.++++..+...  ...+.+.++.+++++.+|++++.++++|++++++
T Consensus       236 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  313 (334)
T 3qwb_A          236 ALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIAD--PEEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYR  313 (334)
T ss_dssp             HEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCS--HHHHHHHHHHHHHHHHTTSSCCCEEEEEEGGGHH
T ss_pred             HhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCC--HHHHHHHHHHHHHHHHCCCccCceeeEEcHHHHH
Confidence            99999999999987655456777788889999998776544321  2234556677999999999999999999999999


Q ss_pred             HHHHHHHhCCCceeEEEeC
Q 019790          317 EAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       317 ~a~~~~~~~~~~gkvvi~~  335 (335)
                      +||+.+.+++..||+|+++
T Consensus       314 ~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          314 TAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHhCCCceEEEEec
Confidence            9999999999999999975

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.3e-54  Score=401.09  Aligned_cols=312  Identities=29%  Similarity=0.437  Sum_probs=285.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+ +++.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus        28 mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~  106 (363)
T 3uog_A           28 MQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFR  106 (363)
T ss_dssp             EEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             hEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCC
Confidence            899999987 4567999999999999999999999999999999999998776567899999999999999999999999


Q ss_pred             CCCEEEEec------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcC
Q 019790           81 VGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH  136 (335)
Q Consensus        81 ~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~  136 (335)
                      +||+|++..                        .+|+|+||++++++.++++|+++++++||+++++++|||+++.+..+
T Consensus       107 vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~  186 (363)
T 3uog_A          107 PGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGH  186 (363)
T ss_dssp             TTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTC
T ss_pred             CCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcC
Confidence            999999861                        24899999999999999999999999999999999999999988899


Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      +++|++|||          +| +|++|++++|+|+.+|++|+++++++++++.++++|++.++|....++.+.+++.+++
T Consensus       187 ~~~g~~VlV----------~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g  255 (363)
T 3uog_A          187 LRAGDRVVV----------QG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGD  255 (363)
T ss_dssp             CCTTCEEEE----------ES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTT
T ss_pred             CCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCC
Confidence            999999999          98 8999999999999999999999999999999999999999996668899999999998


Q ss_pred             CcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHH
Q 019790          217 KGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA  296 (335)
Q Consensus       217 ~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (335)
                      .++|++|||+|...+..++++|+++|+++.+|........++...++.+++++.++.....          +.++.++++
T Consensus       256 ~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l  325 (363)
T 3uog_A          256 RGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHR----------RALEDLVGA  325 (363)
T ss_dssp             CCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCH----------HHHHHHHHH
T ss_pred             CCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCH----------HHHHHHHHH
Confidence            8999999999988899999999999999999987765456777888899999999876532          234448899


Q ss_pred             HHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          297 IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       297 ~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+|+++++++++|+|+++++|++.+.+++ .||+|+++
T Consensus       326 ~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          326 VDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            999999999999999999999999999988 89999975

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=4.2e-54  Score=394.34  Aligned_cols=323  Identities=24%  Similarity=0.338  Sum_probs=284.5

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..+|+| +.+++++.|.|+|++|||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|
T Consensus         5 mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~   84 (340)
T 3gms_A            5 GKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRE   84 (340)
T ss_dssp             EEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCGG
T ss_pred             cEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCCC
Confidence            799999999987 7799999999999999999999999999999999999877666789999999999999999999999


Q ss_pred             CCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccccc
Q 019790           80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGS  159 (335)
Q Consensus        80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~  159 (335)
                      ++||+|+++..+|+|+||++++++.++++|+++++++||+++..++|||+++.+..++++|++|||          +|+.
T Consensus        85 ~vGdrV~~~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV----------~Ga~  154 (340)
T 3gms_A           85 LIGKRVLPLRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLV----------NACG  154 (340)
T ss_dssp             GTTCEEEECSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEE----------SSTT
T ss_pred             CCCCEEEecCCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEE----------eCCc
Confidence            999999999888999999999999999999999999999999999999999988999999999999          9988


Q ss_pred             chHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          160 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       160 g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      |++|++++|+|+.+|++|+++++++++++.++++|++.++|+.+.++.+.+++.+++.++|++|||+|+......+++|+
T Consensus       155 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~l~  234 (340)
T 3gms_A          155 SAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLR  234 (340)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHHHHHHHHTEE
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCChhHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999999999889999999999988777889999


Q ss_pred             CCCEEEEEeccCCCccccChhHHh-hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc-ccccccchhhHHH
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLF-AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP-VIYKYLPLCEAAE  317 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~l~~~~~  317 (335)
                      ++|+++.+|.....  .++...+. ..++.+....+..+..........+.++.+++++.+|++++ .++++|+++++++
T Consensus       235 ~~G~iv~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~~~~l~~~~~  312 (340)
T 3gms_A          235 PNGHFLTIGLLSGI--QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHSTYELADVKA  312 (340)
T ss_dssp             EEEEEEECCCTTSC--CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEEGGGHHH
T ss_pred             CCCEEEEEeecCCC--CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccEEEeHHHHHH
Confidence            99999999976543  34444433 23555555443322111111233556777999999999987 5789999999999


Q ss_pred             HHHHHHhCCC-ceeEEEeC
Q 019790          318 AHQLMESSQH-IGKIMLVP  335 (335)
Q Consensus       318 a~~~~~~~~~-~gkvvi~~  335 (335)
                      |++.+.+++. .||+|+++
T Consensus       313 A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          313 AVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHhcCCCCCeEEEEE
Confidence            9999999875 49999975

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.1e-53  Score=390.97  Aligned_cols=321  Identities=29%  Similarity=0.440  Sum_probs=275.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++++.+++++.+.|+|++|||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (349)
T 4a27_A            4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYE   83 (349)
T ss_dssp             EEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCC
Confidence            89999999998888999999999999999999999999999999999998776667899999999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++..+|+|+||++++.+.++++|+++++++||+++++++|||+++.+..++++|++|||          +|++|
T Consensus        84 ~GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~Ga~G  153 (349)
T 4a27_A           84 IGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLV----------HSAGG  153 (349)
T ss_dssp             TTCEEEEECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEE----------SSTTS
T ss_pred             CCCEEEEecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEE----------EcCCc
Confidence            99999999888999999999999999999999999999999999999999988899999999999          99889


Q ss_pred             hHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          161 GIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       161 ~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      ++|++++|+|+.+| ++|++++ ++++++.++ +|++.+++ .+.++.+.+++.++ +++|++|||+|+..+..++++|+
T Consensus       154 ~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~-~g~Dvv~d~~g~~~~~~~~~~l~  229 (349)
T 4a27_A          154 GVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNADYVQEVKRISA-EGVDIVLDCLCGDNTGKGLSLLK  229 (349)
T ss_dssp             HHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCT-TCEEEEEEECC-------CTTEE
T ss_pred             HHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcC-CCceEEEECCCchhHHHHHHHhh
Confidence            99999999999995 5888887 677888887 99999999 77888888888875 58999999999988888999999


Q ss_pred             CCCEEEEEeccCCCc----------------cccChhHHhhcceEEEEeeccccchhh-HHHHHHHHHHHHHHHHHCCcc
Q 019790          240 IDGRLFIIGTQGGAK----------------TELNITSLFAKRLTVQAAGLRSRSTEN-KALIVSEVEKNVWPAIAVGKV  302 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~  302 (335)
                      ++|+++.+|......                ..++...++.+++++.++.+....... ......+.++.+++++++|++
T Consensus       230 ~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  309 (349)
T 4a27_A          230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKI  309 (349)
T ss_dssp             EEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCc
Confidence            999999998754211                125566778889999998764322111 112345667779999999999


Q ss_pred             ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          303 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       303 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++++++|+++++++|++.+.+++..||+|+++
T Consensus       310 ~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          310 KPVVDSLWALEEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             CCCEEEEECGGGHHHHHHHHHTTCCSSEEEEET
T ss_pred             cccccceECHHHHHHHHHHHHhCCCCceEEEec
Confidence            999999999999999999999999999999975

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8e-53  Score=387.11  Aligned_cols=319  Identities=31%  Similarity=0.511  Sum_probs=284.7

Q ss_pred             CEEEEEcCCCCCcceEE-EeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~-~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..+++++.+++ ++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|
T Consensus        30 Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~  109 (351)
T 1yb5_A           30 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF  109 (351)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred             EEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCCC
Confidence            89999999988888999 89999999999999999999999999999998765445679999999999999999999999


Q ss_pred             CCCCEEEEecC-CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccc
Q 019790           80 KVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGG  158 (335)
Q Consensus        80 ~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~  158 (335)
                      ++||+|++... +|+|+||++++++.++++|+++++++||+++++++|||+++.+..++++|+++||          +|+
T Consensus       110 ~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV----------~Ga  179 (351)
T 1yb5_A          110 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLV----------HGA  179 (351)
T ss_dssp             CTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEE----------ETC
T ss_pred             CCCCEEEEeCCCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEE----------ECC
Confidence            99999998753 6999999999999999999999999999999999999999987889999999999          998


Q ss_pred             cchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccc
Q 019790          159 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL  238 (335)
Q Consensus       159 ~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (335)
                      +|++|++++|+++..|++|+++++++++.+.++++|++.++|+.+.++.+.+.+.+++.++|++|||+|+..+..+++++
T Consensus       180 sggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~~~~~~~~~l  259 (351)
T 1yb5_A          180 SGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLL  259 (351)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHE
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999998888888899988877899999999998888899999


Q ss_pred             cCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHH
Q 019790          239 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEA  318 (335)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a  318 (335)
                      +++|+++.+|...  ...++...++.+++++.++.+......    .+.+.++.+.+++.+|+++++++++|+++++++|
T Consensus       260 ~~~G~iv~~g~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~l~~~~~~g~l~~~i~~~~~l~~~~~A  333 (351)
T 1yb5_A          260 SHGGRVIVVGSRG--TIEINPRDTMAKESSIIGVTLFSSTKE----EFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEA  333 (351)
T ss_dssp             EEEEEEEECCCCS--CEEECTHHHHTTTCEEEECCGGGCCHH----HHHHHHHHHHHHHHHTCCCCCEEEEEEGGGHHHH
T ss_pred             cCCCEEEEEecCC--CCccCHHHHHhCCcEEEEEEeecCCHH----HHHHHHHHHHHHHHCCCccCccceEEcHHHHHHH
Confidence            9999999998642  234666677889999999865433222    2355566688889999999999999999999999


Q ss_pred             HHH-HHhCCCceeEEEeC
Q 019790          319 HQL-MESSQHIGKIMLVP  335 (335)
Q Consensus       319 ~~~-~~~~~~~gkvvi~~  335 (335)
                      ++. +++++..||+|+++
T Consensus       334 ~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          334 HENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHHHSSCCSSEEEEEC
T ss_pred             HHHHHHhCCCCeEEEEeC
Confidence            998 56667789999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=3.1e-53  Score=387.52  Aligned_cols=322  Identities=30%  Similarity=0.463  Sum_probs=282.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC-CCC-CCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-PPP-KGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~-~~~-~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++.++.+++++.+.|+|.++||+|||.++|||++|++.+.|.+ +.. ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999999888889999999999999999999999999999999998865 211 346899999999999999999999


Q ss_pred             CCCCCEEEEecC-CcceeeEEEecCCceEeCCCCCChhh--hccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           79 WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKD--AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        79 ~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~--aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                      |++||+|+.... +|+|+||++++++.++++|+++++++  ||+++.+++|||+++.+..++++++++||          
T Consensus        82 ~~~GdrV~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV----------  151 (333)
T 1wly_A           82 FTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLI----------  151 (333)
T ss_dssp             CCTTCEEEECSSSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------
T ss_pred             CCCCCEEEEecCCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEE----------
Confidence            999999987654 79999999999999999999999999  89999999999999987889999999999          


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +|++|++|++++|+++..|++|+++++++++.+.++++|++.++|+.+.++.+.+.+.+.+.++|++|||+|+..+..++
T Consensus       152 ~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~~~~~~~  231 (333)
T 1wly_A          152 HAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSL  231 (333)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTTTHHHHH
T ss_pred             ECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998888888898888777899999999998889999


Q ss_pred             ccccCCCEEEEEeccCCCccccChh-HHhhcc--eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 019790          236 GSLNIDGRLFIIGTQGGAKTELNIT-SLFAKR--LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL  312 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l  312 (335)
                      ++++++|+++.+|...+....++.. .++.++  +++.|++.....   ......+.++.+++++.+|++++.++++|+|
T Consensus       232 ~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l  308 (333)
T 1wly_A          232 DCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMS---NRSEIDEGSKCLFDAVKAGVLHSSVAKTFPL  308 (333)
T ss_dssp             HTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSC---SHHHHHHHHHHHHHHHHTTSCCCCEEEEEEG
T ss_pred             HhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhcc---CHHHHHHHHHHHHHHHHCCCcCCCcceEEeH
Confidence            9999999999999766443456666 677888  999887552111   1122345667799999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCceeEEEeC
Q 019790          313 CEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       313 ~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++++|++.+.+++..||+|+++
T Consensus       309 ~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          309 REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHHHHHHcCCCceEEEEEe
Confidence            99999999999988889999875

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3e-53  Score=389.11  Aligned_cols=315  Identities=35%  Similarity=0.555  Sum_probs=281.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.++.+++++.+.|+|+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            99999999988778999999999999999999999999999999999987654345789999999999999999999999


Q ss_pred             CCCEEE-------E--------------------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVC-------A--------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~-------~--------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|+       +                    +..+|+|+||++++++.++++|+++++++||+++.++.|||+++.+
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~  160 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVD  160 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTT
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHH
Confidence            999998       4                    2336999999999999999999999999999999999999999977


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  213 (335)
                      ..++++++++||          +|++|++|++++|+++.+|++|+++++++++.+.++++|++.++|+.+.++.+.+.+.
T Consensus       161 ~~~~~~g~~vlV----------~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~  230 (343)
T 2eih_A          161 KLGVRPGDDVLV----------MAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRL  230 (343)
T ss_dssp             TSCCCTTCEEEE----------CSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHH
T ss_pred             hcCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHH
Confidence            679999999999          9988999999999999999999999999999999999999999998888888888888


Q ss_pred             hCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHH
Q 019790          214 TGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV  293 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (335)
                      +++.++|++|||+|...+..+++.|+++|+++.+|........++...++.+++++.++.....          +.++.+
T Consensus       231 ~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~  300 (343)
T 2eih_A          231 TGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASK----------SRLFPI  300 (343)
T ss_dssp             TTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCG----------GGHHHH
T ss_pred             hCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccH----------HHHHHH
Confidence            8777899999999977788999999999999999876654334677777889999998764321          123348


Q ss_pred             HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          294 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       294 ~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++.+|++++.++++|+|+++++|++.+++++..||+|+++
T Consensus       301 ~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          301 LRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence            899999999999999999999999999999988889999975

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=4.5e-54  Score=395.47  Aligned_cols=321  Identities=23%  Similarity=0.296  Sum_probs=279.9

Q ss_pred             CEEEEEc--CC-CCCcceEEEee---------cCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEE
Q 019790            1 MKAIVIT--QP-GSPEVLQLQEV---------EDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGT   68 (335)
Q Consensus         1 mka~~~~--~~-~~~~~l~~~~~---------~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~   68 (335)
                      |||+++.  ++ +.++.+++++.         +.|+|++|||+|||.+++||++|++.+.|.++....+|.++|||++|+
T Consensus        11 mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~   90 (349)
T 3pi7_A           11 MKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGT   90 (349)
T ss_dssp             EEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEEE
T ss_pred             heEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEEE
Confidence            8999999  54 34566888888         999999999999999999999999999998776667899999999999


Q ss_pred             EEEecCCC-CCCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCC-CEE
Q 019790           69 ILSVGKNV-SRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPG-ESF  143 (335)
Q Consensus        69 V~~vG~~~-~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~-~~v  143 (335)
                      |+++|+++ ++|++||+|++..   .+|+|+||++++++.++++|+++++++||+++..++|||+++ +..+ +++ +++
T Consensus        91 V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~~v  168 (349)
T 3pi7_A           91 IVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVK-QEGEKAF  168 (349)
T ss_dssp             EEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHHH-HHCCSEE
T ss_pred             EEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHHh-hCCCCEE
Confidence            99999999 9999999999885   579999999999999999999999999999999999999766 4455 666 799


Q ss_pred             EEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEE
Q 019790          144 LVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL  223 (335)
Q Consensus       144 li~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi  223 (335)
                      ||          +||+|++|++++|+|+.+|++|+++++++++++.++++|++.++|+++.++.+.+++.+++.++|++|
T Consensus       169 li----------~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vi  238 (349)
T 3pi7_A          169 VM----------TAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFL  238 (349)
T ss_dssp             EE----------SSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEE
T ss_pred             EE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEE
Confidence            99          99999999999999999999999999999999999999999999999999999999998877899999


Q ss_pred             eCCChhhHHHhhccccCCCEEEEEeccCCCccccCh-hHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcc
Q 019790          224 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV  302 (335)
Q Consensus       224 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  302 (335)
                      ||+|+..+..++++|+++|+++.+|........++. ..++.+++++.+++...+..... ....+.++.+++++.+|++
T Consensus       239 d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~l  317 (349)
T 3pi7_A          239 DAVTGPLASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFK-ERRGPAILEAQKRFSDGRW  317 (349)
T ss_dssp             ESSCHHHHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTH-HHHHHHHHHC-CTTTTSSC
T ss_pred             ECCCChhHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCc-HHHHHHHHHHHHHHHcCCc
Confidence            999998888899999999999999976655556776 77888999999987765432222 3345667778999999999


Q ss_pred             ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          303 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       303 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++++++|+|+++++|++.+. ++..||+|++|
T Consensus       318 ~~~i~~~~~l~~~~~A~~~~~-~~~~gKvvl~p  349 (349)
T 3pi7_A          318 STDVTAVVPLAEAIAWVPAEL-TKPNGKVFIRP  349 (349)
T ss_dssp             CC-CCEEEEHHHHHHHHHHHH-TSSSSCEEEEC
T ss_pred             ccccceEEcHHHHHHHHHHHh-CCCCceEEEeC
Confidence            999999999999999999554 45669999987

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-52  Score=381.82  Aligned_cols=321  Identities=32%  Similarity=0.468  Sum_probs=283.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.++.+++++.+.|+|.++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIK   80 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC-CCCCCCCCceeEEEEEEECCCCCCCC
Confidence            89999999988888999999999999999999999999999999999987642 34689999999999999999999999


Q ss_pred             CCCEEEEec--CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccc
Q 019790           81 VGDQVCALL--GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGG  158 (335)
Q Consensus        81 ~Gd~V~~~~--~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~  158 (335)
                      +||+| +++  .+|+|+||++++++.++++|+++++++||+++++++|||+++.+..++++|+++||          +|+
T Consensus        81 ~GdrV-~~~g~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV----------~Ga  149 (327)
T 1qor_A           81 AGDRV-VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLF----------HAA  149 (327)
T ss_dssp             TTCEE-EESCCSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------SST
T ss_pred             CCCEE-EECCCCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEE----------ECC
Confidence            99999 554  45999999999999999999999999999999999999999977889999999999          999


Q ss_pred             cchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccc
Q 019790          159 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL  238 (335)
Q Consensus       159 ~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l  238 (335)
                      +|++|++++|+++..|++|+++++++++.+.++++|++.++|+.+.++.+.+.+.+.+.++|++|||+|...+..+++++
T Consensus       150 ~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l  229 (327)
T 1qor_A          150 AGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCL  229 (327)
T ss_dssp             TBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTE
T ss_pred             CCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998888888888888777899999999988889999999


Q ss_pred             cCCCEEEEEeccCCCccccChhHHhhc-ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccc--cccchhhH
Q 019790          239 NIDGRLFIIGTQGGAKTELNITSLFAK-RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY--KYLPLCEA  315 (335)
Q Consensus       239 ~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~l~~~  315 (335)
                      +++|+++.+|...+....++...++.+ ++++.+..+..+...  .....+.++.+++++.+|++++.++  ++|+|+++
T Consensus       230 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~l~~~  307 (327)
T 1qor_A          230 QRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITT--REELTEASNELFSLIASGVIKVDVAEQQKYPLKDA  307 (327)
T ss_dssp             EEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCS--HHHHHHHHHHHHHHHHTTSSCCCCCGGGEEEGGGH
T ss_pred             cCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCC--HHHHHHHHHHHHHHHHCCCcccccccCcEEcHHHH
Confidence            999999999976654345666777777 788776543221110  1123445677999999999999888  99999999


Q ss_pred             HHHHHHHHhCCCceeEEEeC
Q 019790          316 AEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       316 ~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++|++.+++++..||+|++|
T Consensus       308 ~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          308 QRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHHHHHHhCCCCceEEEeC
Confidence            99999999988889999975

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.6e-52  Score=384.71  Aligned_cols=317  Identities=25%  Similarity=0.366  Sum_probs=279.6

Q ss_pred             CEEEEEcCCC---CCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPG---SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~---~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..+|   .++.+++++.|.|+|++|||+|||.+++||++|++.+.|.   ...+|.++|||++|+|+++|++++
T Consensus         3 MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~~p~i~G~e~~G~V~~vG~~v~   79 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD---VSKAPRVLGFDAIGVVESVGNEVT   79 (346)
T ss_dssp             EEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC---CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC---CCCCCcCcCCccEEEEEEeCCCCC
Confidence            8999999998   6788999999999999999999999999999999999886   234689999999999999999999


Q ss_pred             CCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCC------CCCEEEEeec
Q 019790           78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS------PGESFLVDFC  148 (335)
Q Consensus        78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~------~~~~vli~~~  148 (335)
                      +|++||+|++..   .+|+|+||++++.+.++++|+++++++||+++.+++|||+++.+..+++      +|++|||   
T Consensus        80 ~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV---  156 (346)
T 3fbg_A           80 MFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLI---  156 (346)
T ss_dssp             SCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEE---
T ss_pred             cCCCCCEEEEcCCCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEE---
Confidence            999999999864   3699999999999999999999999999999999999999998888998      9999999   


Q ss_pred             cccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          149 SISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       149 ~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                             +||+|++|++++|+|+.+|++|+++++++++++.++++|++.++++.+ ++.+.+++. .++++|++|||+|+
T Consensus       157 -------~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~-~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          157 -------INGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQ-GIELVDYVFCTFNT  227 (346)
T ss_dssp             -------ESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHH-TCCCEEEEEESSCH
T ss_pred             -------EcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHh-CCCCccEEEECCCc
Confidence                   988999999999999999999999999999999999999999998875 677788877 66789999999998


Q ss_pred             hh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh--hHHHHHHHHHHHHHHHHHCCccccc
Q 019790          229 SY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE--NKALIVSEVEKNVWPAIAVGKVKPV  305 (335)
Q Consensus       229 ~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~  305 (335)
                      .. +..++++|+++|+++.++...   ..++...+..+++++.++++......  .......+.++.+++++++|++++.
T Consensus       228 ~~~~~~~~~~l~~~G~iv~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  304 (346)
T 3fbg_A          228 DMYYDDMIQLVKPRGHIATIVAFE---NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPT  304 (346)
T ss_dssp             HHHHHHHHHHEEEEEEEEESSCCS---SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             hHHHHHHHHHhccCCEEEEECCCC---CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECC
Confidence            65 688999999999999887432   34666677788999998765532111  1112345667779999999999999


Q ss_pred             ccccc---chhhHHHHHHHHHhCCCceeEEEeC
Q 019790          306 IYKYL---PLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       306 ~~~~~---~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++|   +++++++|++.+.+++..||+|+++
T Consensus       305 i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          305 TTKVIEGLTTENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             EEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ccceecCCCHHHHHHHHHHHhcCCcceEEEEec
Confidence            88777   9999999999999999999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.5e-52  Score=384.23  Aligned_cols=316  Identities=25%  Similarity=0.410  Sum_probs=279.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCC-CCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP-KGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++++  +++++.|.|+|++|||+|||.+++||++|++.+.|..+.. ..+|.++|||++|+|+++|+++++|
T Consensus         8 mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~   85 (343)
T 3gaz_A            8 MIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSF   85 (343)
T ss_dssp             EEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             heEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCC
Confidence            899999999877  9999999999999999999999999999999999875432 4579999999999999999999999


Q ss_pred             CCCCEEEEec-----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccc
Q 019790           80 KVGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSD  154 (335)
Q Consensus        80 ~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~  154 (335)
                      ++||+|+++.     .+|+|+||++++.+.++++|+++++++||+++.+++|||+++.+..++++|++|||         
T Consensus        86 ~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV---------  156 (343)
T 3gaz_A           86 RVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLI---------  156 (343)
T ss_dssp             CTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEE---------
T ss_pred             CCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEE---------
Confidence            9999999885     36999999999999999999999999999999999999999988899999999999         


Q ss_pred             cccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          155 VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       155 ~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                       +|++|++|++++|+|+..|++|+++ +++++++.++++|++. ++ ...++.+.+++.+++.++|++|||+|+..+..+
T Consensus       157 -~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~  232 (343)
T 3gaz_A          157 -QGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGPVLDAS  232 (343)
T ss_dssp             -ETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTHHHHHH
T ss_pred             -ecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcHHHHHH
Confidence             9999999999999999999999999 7999999999999988 77 778888999999998899999999999888999


Q ss_pred             hccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccc-hhhHHHHHHHHHHHHHHHHHCCccccccc-cccch
Q 019790          235 LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS-TENKALIVSEVEKNVWPAIAVGKVKPVIY-KYLPL  312 (335)
Q Consensus       235 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~l  312 (335)
                      +++|+++|+++.+|...    ..+...+..+++++.+++..... .........+.++.+++++++|++++.++ ++|+|
T Consensus       233 ~~~l~~~G~iv~~g~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~l  308 (343)
T 3gaz_A          233 FSAVKRFGHVVSCLGWG----THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSI  308 (343)
T ss_dssp             HHHEEEEEEEEESCCCS----CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCCCBCSCCEET
T ss_pred             HHHHhcCCeEEEEcccC----ccccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCcccCccCcEecH
Confidence            99999999999998654    34566778899999987653211 11112234556777999999999999988 79999


Q ss_pred             hhHHHHHHHHHhCCC----ceeEEEeC
Q 019790          313 CEAAEAHQLMESSQH----IGKIMLVP  335 (335)
Q Consensus       313 ~~~~~a~~~~~~~~~----~gkvvi~~  335 (335)
                      +++++|++.+.+++.    .||+|+++
T Consensus       309 ~~~~~A~~~~~~~~~~Gr~~GK~v~~~  335 (343)
T 3gaz_A          309 AEIGSAYDAVLGRNDVPRQRGKIAITV  335 (343)
T ss_dssp             TCHHHHHHHHHTCTTCCCCSSBCEEEC
T ss_pred             HHHHHHHHHHHcCCCcccccceEEEEe
Confidence            999999999998876    56888764

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=7.9e-53  Score=388.31  Aligned_cols=324  Identities=22%  Similarity=0.301  Sum_probs=275.1

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~-~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.+ +.+++++.+.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|
T Consensus        27 mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~  106 (357)
T 1zsy_A           27 VRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGL  106 (357)
T ss_dssp             EEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCSC
T ss_pred             hEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCCC
Confidence            799999998876 4589999999999999999999999999999999999776544578999999999999999999999


Q ss_pred             CCCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccc
Q 019790           80 KVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGG  158 (335)
Q Consensus        80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~  158 (335)
                      ++||+|++.. .+|+|+||++++++.++++|+++++++||+++++++|||+++.+..++++|++|||          +|+
T Consensus       107 ~vGdrV~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~Ga  176 (357)
T 1zsy_A          107 KPGDWVIPANAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQ----------NAS  176 (357)
T ss_dssp             CTTCEEEESSSCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEE----------SST
T ss_pred             CCCCEEEEcCCCCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEE----------eCC
Confidence            9999999875 36999999999999999999999999999999999999999988889999999999          998


Q ss_pred             cchHHHHHHHHHhhCCCeEEEEecChh----hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC-cccEEEeCCChhhHHH
Q 019790          159 SSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCKDLGADVCINYKTEDFVARVKEETGGK-GVDVILDCMGASYFQR  233 (335)
Q Consensus       159 ~g~~G~~a~~~a~~~g~~V~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~  233 (335)
                      +|++|++++|+|+.+|+++++++++.+    +++.++++|++.++|+.+.. .+.+.+.+.+. ++|++|||+|+.....
T Consensus       177 ~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~~~Dvvid~~g~~~~~~  255 (357)
T 1zsy_A          177 NSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR-RPEMKNFFKDMPQPRLALNCVGGKSSTE  255 (357)
T ss_dssp             TSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH-SGGGGGTTSSSCCCSEEEESSCHHHHHH
T ss_pred             cCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch-HHHHHHHHhCCCCceEEEECCCcHHHHH
Confidence            899999999999999999888876532    46788899999998864311 12344555443 5999999999988778


Q ss_pred             hhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchh
Q 019790          234 NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLC  313 (335)
Q Consensus       234 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~  313 (335)
                      ++++++++|+++.+|........++...++.+++++.+++...+.........++.++.+++++.+|++++.+.++|+|+
T Consensus       256 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~  335 (357)
T 1zsy_A          256 LLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQ  335 (357)
T ss_dssp             HHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGG
T ss_pred             HHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCccceEEcHH
Confidence            89999999999999865544456777778889999999876532111111223456677999999999998888999999


Q ss_pred             hHHHHHHHHHhCCCceeEEEeC
Q 019790          314 EAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       314 ~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++|++.+.+++..||+|+++
T Consensus       336 ~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          336 DYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             GHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHhCCCCCcEEEeC
Confidence            9999999999888889999975

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.1e-52  Score=383.78  Aligned_cols=308  Identities=24%  Similarity=0.367  Sum_probs=275.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-CCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-PKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++++  +++++.+.|+|++|||+|||.+++||++|++.+.|..+. +..+|.++|||++|+|+++|+++++|
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF   78 (345)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEcCCCCc--eEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence            999999999876  899999999999999999999999999999999987642 34679999999999999999999999


Q ss_pred             CCCCEEEEec--------------------------------CCcceeeEEEec-CCceEeCCCCCChhhhccCcchHHH
Q 019790           80 KVGDQVCALL--------------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAAAFPEVACT  126 (335)
Q Consensus        80 ~~Gd~V~~~~--------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~~~~~~~~  126 (335)
                      ++||+|++..                                .+|+|+||++++ .+.++++|+ +++++||+++++++|
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~t  157 (345)
T 3jv7_A           79 GVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLT  157 (345)
T ss_dssp             CTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHH
T ss_pred             CCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHH
Confidence            9999998742                                369999999999 899999999 999999999999999


Q ss_pred             HHHHHHH-hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790          127 VWSTVFM-TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTE  204 (335)
Q Consensus       127 a~~~l~~-~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~  204 (335)
                      ||+++.+ ...+++|++|||          +|+ |++|++++|+|+.+ |++|+++++++++++.++++|++.++++++ 
T Consensus       158 a~~~l~~~~~~~~~g~~vlv----------~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-  225 (345)
T 3jv7_A          158 PYHAISRVLPLLGPGSTAVV----------IGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-  225 (345)
T ss_dssp             HHHHHHTTGGGCCTTCEEEE----------ECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-
T ss_pred             HHHHHHHhccCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-
Confidence            9999976 458999999999          985 99999999999999 679999999999999999999999999876 


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      ++.+.+++.+++.++|++|||+|+. .+..++++|+++|+++.+|.......+++. .++.+++++.++.....      
T Consensus       226 ~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~------  298 (345)
T 3jv7_A          226 GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTR------  298 (345)
T ss_dssp             THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCH------
T ss_pred             cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCH------
Confidence            7888999999888999999999997 688999999999999999987653445554 67788999998876532      


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                          +.++.+++++.+|++++ +.++|+++++++|++.+.+++..||+|++|
T Consensus       299 ----~~~~~~~~l~~~g~l~~-~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          299 ----SELMEVVALARAGRLDI-HTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             ----HHHHHHHHHHHTTCCCC-CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             ----HHHHHHHHHHHcCCCce-EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence                22344899999999998 458999999999999999999999999986

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=3.8e-53  Score=385.59  Aligned_cols=314  Identities=19%  Similarity=0.275  Sum_probs=276.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++|+.+++++.+.|+|++|||+|||.+++||++|++.+.|..+....+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            9999999999988899999999999999999999999999999999999887666789999999999999998  57899


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH--hcCCCCCC-EEEEeecccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM--TSHLSPGE-SFLVDFCSIS  151 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~--~~~~~~~~-~vli~~~~~~  151 (335)
                      +||+|++..      .+|+|+||++++++.++++|+++++++||++++.++|||+++..  ..++++++ +|||      
T Consensus        79 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV------  152 (324)
T 3nx4_A           79 AGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVV------  152 (324)
T ss_dssp             TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE------
T ss_pred             CCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEE------
Confidence            999999763      57999999999999999999999999999999999999998863  35566633 4999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                          +|++|++|++++|+|+.+|++|+++++++++++.++++|++.++|+++.+.   +++.++ .++|++|||+|+..+
T Consensus       153 ----~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~-~~~d~v~d~~g~~~~  224 (324)
T 3nx4_A          153 ----TGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAE---SRPLEK-QLWAGAIDTVGDKVL  224 (324)
T ss_dssp             ----SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSC---CCSSCC-CCEEEEEESSCHHHH
T ss_pred             ----ECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHH---HHhhcC-CCccEEEECCCcHHH
Confidence                998899999999999999999999999999999999999999999876543   333443 489999999999988


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|.......+++...++.+++++.+++........    ..+.++.+++++.+|++++. +++|+
T Consensus       225 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~g~l~~~-~~~~~  299 (324)
T 3nx4_A          225 AKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPAR----RAEAWARLVKDLPESFYAQA-ATEIT  299 (324)
T ss_dssp             HHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHH----HHHHHHHHHHHSCHHHHHHH-EEEEE
T ss_pred             HHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHH----HHHHHHHHHHHHHcCCCCCC-ceeEe
Confidence            99999999999999999876654566777788899999998765443222    24456668899999999887 89999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+.+++..||+|+++
T Consensus       300 l~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          300 LADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCceEEEec
Confidence            999999999999999999999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.6e-52  Score=382.80  Aligned_cols=306  Identities=23%  Similarity=0.353  Sum_probs=271.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCC-CCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~-~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..++.+  +++++.|.|+ |+++||+|||.+++||++|++.+.|.++.  ...+|.++|||++|+|+++|++++
T Consensus        16 mka~~~~~~g~~--l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   93 (359)
T 1h2b_A           16 LKAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   93 (359)
T ss_dssp             -CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             ceEEEEecCCCC--cEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCC
Confidence            899999988754  8999999999 99999999999999999999999987641  234689999999999999999999


Q ss_pred             CCCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhc---cCcchHHHH
Q 019790           78 RWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAA---AFPEVACTV  127 (335)
Q Consensus        78 ~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa---~~~~~~~~a  127 (335)
                      +|++||+|+++.                           .+|+|+||++++++.++++|+++++++||   +++++++||
T Consensus        94 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta  173 (359)
T 1h2b_A           94 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITA  173 (359)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHH
T ss_pred             CCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHH
Confidence            999999998753                           35999999999999999999999999999   788999999


Q ss_pred             HHHHHHh-cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          128 WSTVFMT-SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       128 ~~~l~~~-~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      |+++.+. .++++|++|||          +|+ |++|++++|+|+.+ |++|+++++++++++.++++|+++++|+++. 
T Consensus       174 ~~al~~~~~~~~~g~~VlV----------~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-  241 (359)
T 1h2b_A          174 YRAVKKAARTLYPGAYVAI----------VGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-  241 (359)
T ss_dssp             HHHHHHHHTTCCTTCEEEE----------ECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-
T ss_pred             HHHHHhhccCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-
Confidence            9999665 89999999999          997 99999999999999 9999999999999999999999999999887 


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh---hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK  282 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
                      +.+.+++.+++.++|++|||+|+.   .+..++++  ++|+++.+|.....  .++...++.+++++.++.....     
T Consensus       242 ~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~--~~~~~~~~~~~~~i~g~~~~~~-----  312 (359)
T 1h2b_A          242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL--RFPTIRVISSEVSFEGSLVGNY-----  312 (359)
T ss_dssp             HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC--CCCHHHHHHTTCEEEECCSCCH-----
T ss_pred             HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC--CCCHHHHHhCCcEEEEecCCCH-----
Confidence            888888888877899999999987   67777777  99999999876543  6777778889999999765431     


Q ss_pred             HHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          283 ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       283 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           +.++.+++++.+|++++.+ ++|+|+++++|++.+++++..||+|++|
T Consensus       313 -----~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          313 -----VELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             -----HHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -----HHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence                 2244589999999999988 9999999999999999988889999976

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=6.2e-52  Score=382.89  Aligned_cols=318  Identities=22%  Similarity=0.312  Sum_probs=277.9

Q ss_pred             CEEEEEcCC---CCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~---~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..+   +.+..+++++.|.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus        23 MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~~vG~~v~  101 (363)
T 4dvj_A           23 MKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD-GTDWKVIGYDAAGIVSAVGPDVT  101 (363)
T ss_dssp             EEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC---CCSBCCCCCEEEEEEEECTTCC
T ss_pred             eEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC-CCCCCcccceeEEEEEEeCCCCC
Confidence            899999988   56788999999999999999999999999999999999988654 35689999999999999999999


Q ss_pred             CCCCCCEEEEec---CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCC-----CCCEEEEeecc
Q 019790           78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS-----PGESFLVDFCS  149 (335)
Q Consensus        78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~-----~~~~vli~~~~  149 (335)
                      +|++||+|+++.   .+|+|+||++++++.++++|+++++++||+++.+++|||+++.+..+++     +|++|||    
T Consensus       102 ~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV----  177 (363)
T 4dvj_A          102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILI----  177 (363)
T ss_dssp             SCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEE----
T ss_pred             CCCCCCEEEEccCCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEE----
Confidence            999999999863   4699999999999999999999999999999999999999998888888     8999999    


Q ss_pred             ccccccccccchHHHHHHHHHhh-CCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          150 ISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       150 ~~~~~~~g~~g~~G~~a~~~a~~-~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                            +||+|++|++++|+|+. .|++|+++++++++++.++++|++.++|+.+ ++.+.+++. .++++|++|||+|+
T Consensus       178 ------~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~-~~~g~Dvvid~~g~  249 (363)
T 4dvj_A          178 ------VGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAAL-GLGAPAFVFSTTHT  249 (363)
T ss_dssp             ------ESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTT-CSCCEEEEEECSCH
T ss_pred             ------ECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHh-cCCCceEEEECCCc
Confidence                  99999999999999998 4899999999999999999999999999875 677788877 56689999999998


Q ss_pred             h-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchh--hHHHHHHHHHHHHHHHHHCCccccc
Q 019790          229 S-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE--NKALIVSEVEKNVWPAIAVGKVKPV  305 (335)
Q Consensus       229 ~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~  305 (335)
                      . .+..++++|+++|+++.+|..    ..++...+..+++++.++........  .......+.++.+++++++|++++.
T Consensus       250 ~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  325 (363)
T 4dvj_A          250 DKHAAEIADLIAPQGRFCLIDDP----SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTT  325 (363)
T ss_dssp             HHHHHHHHHHSCTTCEEEECSCC----SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCC
T ss_pred             hhhHHHHHHHhcCCCEEEEECCC----CccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecc
Confidence            6 578899999999999998642    35667777889999998765432111  1111234567779999999999998


Q ss_pred             ccccc---chhhHHHHHHHHHhCCCceeEEEeC
Q 019790          306 IYKYL---PLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       306 ~~~~~---~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+++   +++++++|++.+.+++..||+|++|
T Consensus       326 i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          326 LTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             EEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence            87655   9999999999999999999999986

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=6.7e-52  Score=379.73  Aligned_cols=307  Identities=26%  Similarity=0.378  Sum_probs=274.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|+|++|||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         3 MkA~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~   80 (340)
T 3s2e_A            3 MKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVK   80 (340)
T ss_dssp             EEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred             eEEEEEecCCCC--CEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCC
Confidence            899999988766  999999999999999999999999999999999998876567899999999999999999999999


Q ss_pred             CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|...                            ..+|+|+||++++++.++++|+++++++||++++++.|||+++ 
T Consensus        81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-  159 (340)
T 3s2e_A           81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-  159 (340)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-
T ss_pred             CCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-
Confidence            99999421                            2369999999999999999999999999999999999999999 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      +..++++|++|||          +| +|++|++++|+|+.+|++|+++++++++++.++++|++.++|+++.++.+.+++
T Consensus       160 ~~~~~~~g~~VlV----------~G-aG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~  228 (340)
T 3s2e_A          160 KVTDTRPGQWVVI----------SG-IGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQK  228 (340)
T ss_dssp             HTTTCCTTSEEEE----------EC-CSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHH
T ss_pred             HHcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHH
Confidence            6779999999999          98 499999999999999999999999999999999999999999999899888888


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                       +.+ ++|++|||+|+ ..+..++++|+++|+++.+|.... ...++...++.+++++.++.....          +.++
T Consensus       229 -~~g-~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~  295 (340)
T 3s2e_A          229 -EIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG-DFGTPIFDVVLKGITIRGSIVGTR----------SDLQ  295 (340)
T ss_dssp             -HHS-SEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS-EEEEEHHHHHHTTCEEEECCSCCH----------HHHH
T ss_pred             -hCC-CCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC-CCCCCHHHHHhCCeEEEEEecCCH----------HHHH
Confidence             444 79999999986 567889999999999999987654 345677778889999999876532          1244


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+++++.+|++++.+ +.++|+++++|++.+++++..||+|+++
T Consensus       296 ~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          296 ESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             HHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHhCCCCceE-EEEeHHHHHHHHHHHHcCCCceEEEEec
Confidence            488999999999865 5779999999999999999999999975

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.1e-51  Score=375.43  Aligned_cols=305  Identities=29%  Similarity=0.415  Sum_probs=266.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC----CCCCCCCCCCCCceEEEEEEecCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY----PPPKGASPYPGLECSGTILSVGKNV   76 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~----~~~~~~p~~~G~e~~G~V~~vG~~~   76 (335)
                      |||+++..+++++.+++++.+.|+|++|||+|||.++|||++|++.+.|..    .....+|.++|||++|+|+++|+++
T Consensus         7 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   86 (321)
T 3tqh_A            7 MKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDV   86 (321)
T ss_dssp             EEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTC
T ss_pred             ceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCC
Confidence            799999999999999999999999999999999999999999999998832    0133568999999999999999999


Q ss_pred             CCCCCCCEEEEec----CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccc
Q 019790           77 SRWKVGDQVCALL----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISY  152 (335)
Q Consensus        77 ~~~~~Gd~V~~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~  152 (335)
                      ++|++||+|+++.    .+|+|+||++++++.++++|+++++++||+++++++|||+++ +..++++|++|||       
T Consensus        87 ~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV-------  158 (321)
T 3tqh_A           87 NNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLI-------  158 (321)
T ss_dssp             CSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEE-------
T ss_pred             CCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEE-------
Confidence            9999999999884    469999999999999999999999999999999999999999 8899999999999       


Q ss_pred             cccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          153 SDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       153 ~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                         +||+|++|++++|+|+.+|++|++++ ++++++.++++|++.++|+++.+ +.+.+      +++|++|||+|+..+
T Consensus       159 ---~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~------~g~D~v~d~~g~~~~  228 (321)
T 3tqh_A          159 ---HAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAIS------TPVDAVIDLVGGDVG  228 (321)
T ss_dssp             ---SSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCC------SCEEEEEESSCHHHH
T ss_pred             ---EcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhc------cCCCEEEECCCcHHH
Confidence               99999999999999999999999998 56678899999999999998877 54433      479999999999888


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|.....   .....+..+++++.+......         .+.++.+++++++|++++.++++|+
T Consensus       229 ~~~~~~l~~~G~iv~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~g~l~~~i~~~~~  296 (321)
T 3tqh_A          229 IQSIDCLKETGCIVSVPTITAG---RVIEVAKQKHRRAFGLLKQFN---------IEELHYLGKLVSEDKLRIEISRIFQ  296 (321)
T ss_dssp             HHHGGGEEEEEEEEECCSTTHH---HHHHHHHHTTCEEECCCCCCC---------HHHHHHHHHHHHTTSSCCCEEEEEC
T ss_pred             HHHHHhccCCCEEEEeCCCCch---hhhhhhhhcceEEEEEecCCC---------HHHHHHHHHHHHCCCcccccccEEc
Confidence            8899999999999999754322   122345677888887543221         1234558999999999999999999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+++++..||+|+++
T Consensus       297 l~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          297 LSEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             GGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCceEEEEe
Confidence            999999999999999999999975

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.8e-51  Score=376.81  Aligned_cols=308  Identities=27%  Similarity=0.391  Sum_probs=273.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++...+ +..++++|.|.|+|++|||||||.++|||++|++++.|.++.  .+|.++|||++|+|+++|+++++|+
T Consensus         1 MKA~v~~~~~-~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~--~~p~i~GhE~aG~V~~vG~~V~~~~   77 (348)
T 4eez_A            1 MKAAVVRHNP-DGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN--KAGTVLGHEGIGIVKEIGADVSSLQ   77 (348)
T ss_dssp             CEEEEECSSC-CSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC--CTTCBCCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEEcCC-CCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC--CCCcccceeEEEEEEEECceeeecc
Confidence            9999987543 245899999999999999999999999999999999998754  4699999999999999999999999


Q ss_pred             CCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+...                            .+|+|+||+.++.+.++++|+++++++|++++++++|||+++ 
T Consensus        78 ~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-  156 (348)
T 4eez_A           78 VGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-  156 (348)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-
T ss_pred             cCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-
Confidence            999997531                            258999999999999999999999999999999999999999 


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      +..++++|++|||          +| +|++|.+++|+|+.+ |++|+++++++++++.++++|++.++|+++.++.+.++
T Consensus       157 ~~~~~~~g~~VlV----------~G-aG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~  225 (348)
T 4eez_A          157 KVSGVKPGDWQVI----------FG-AGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIK  225 (348)
T ss_dssp             HHHTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHH
T ss_pred             cccCCCCCCEEEE----------Ec-CCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhh
Confidence            5678899999999          88 599999999999876 67999999999999999999999999999999999999


Q ss_pred             HHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHH
Q 019790          212 EETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  290 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (335)
                      +.+++.++|.+++++++.. +..+++.++++|+++.+|..... ..++...++.+++++.|+......          .+
T Consensus       226 ~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~gs~~~~~~----------~~  294 (348)
T 4eez_A          226 KITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTE-MTLSVPTVVFDGVEVAGSLVGTRL----------DL  294 (348)
T ss_dssp             HHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCE-EEECHHHHHHSCCEEEECCSCCHH----------HH
T ss_pred             hhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCCC-CccCHHHHHhCCeEEEEEecCCHH----------HH
Confidence            9999999999999988754 78899999999999999875543 567788889999999998765431          13


Q ss_pred             HHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          291 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       291 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+++++++|++++.+ ++|+|+|+++|++.+++++..||+||+|
T Consensus       295 ~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          295 AEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             HHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEc
Confidence            3488999999999865 7899999999999999999999999975

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=4.2e-52  Score=384.55  Aligned_cols=324  Identities=22%  Similarity=0.275  Sum_probs=277.8

Q ss_pred             CEEEEEcCCCCC-cceEEEeecCCCCC--CCcEEEEEEEeecCcchhhhhcCCCCCCCCCC---------CCCCCceEEE
Q 019790            1 MKAIVITQPGSP-EVLQLQEVEDPQIK--DDEVLIKVEATALNRADTLQRKGSYPPPKGAS---------PYPGLECSGT   68 (335)
Q Consensus         1 mka~~~~~~~~~-~~l~~~~~~~~~~~--~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p---------~~~G~e~~G~   68 (335)
                      |||+++..++++ +.+++++.+.|.|.  +|||+|||.++|||++|++.+.|.++....+|         .++|||++|+
T Consensus         4 mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G~   83 (364)
T 1gu7_A            4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE   83 (364)
T ss_dssp             EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred             EEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEEE
Confidence            899999999875 56899999988877  99999999999999999999999765434456         8999999999


Q ss_pred             EEEecCCCCCCCCCCEEEEec-CCcceeeEEEecCCceEeCCC-----------CCChhhhccCcchHHHHHHHHHHhcC
Q 019790           69 ILSVGKNVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPS-----------GVSLKDAAAFPEVACTVWSTVFMTSH  136 (335)
Q Consensus        69 V~~vG~~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~-----------~~~~~~aa~~~~~~~~a~~~l~~~~~  136 (335)
                      |+++|+++++|++||+|++.. .+|+|+||++++++.++++|+           ++++++||+++++++|||+++.+..+
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~  163 (364)
T 1gu7_A           84 VIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVK  163 (364)
T ss_dssp             EEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSC
T ss_pred             EEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhc
Confidence            999999999999999999875 459999999999999999998           89999999999999999999977779


Q ss_pred             CCCC-CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh----HHHHHHcCCCEEEeCCC---ccHHH
Q 019790          137 LSPG-ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDLGADVCINYKT---EDFVA  208 (335)
Q Consensus       137 ~~~~-~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~----~~~~~~~g~~~~~~~~~---~~~~~  208 (335)
                      +++| ++|||          +|++|++|++++|+|+.+|++|++++++.++    ++.++++|++.++|+++   .++.+
T Consensus       164 ~~~g~~~VlV----------~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~  233 (364)
T 1gu7_A          164 LTPGKDWFIQ----------NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGP  233 (364)
T ss_dssp             CCTTTCEEEE----------SCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHH
T ss_pred             cCCCCcEEEE----------CCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHH
Confidence            9999 99999          9988999999999999999999999866554    57788999999998875   67788


Q ss_pred             HHHHHh--CCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHH
Q 019790          209 RVKEET--GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIV  286 (335)
Q Consensus       209 ~~~~~~--~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (335)
                      .+++.+  ++.++|++|||+|+.....++++++++|+++.+|........++...++.+++++.+++...+.... ....
T Consensus       234 ~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~  312 (364)
T 1gu7_A          234 TIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNN-KELK  312 (364)
T ss_dssp             HHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEEECCHHHHHTTC-HHHH
T ss_pred             HHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCCCcccCHHHHhhcCcEEEEEchhHhcccC-HHHH
Confidence            888887  5668999999999987778899999999999998766444556777788899999998764321111 1223


Q ss_pred             HHHHHHHHHHHHCCccccccccccchh---hHHHHHHHHHhCCCceeEEEeC
Q 019790          287 SEVEKNVWPAIAVGKVKPVIYKYLPLC---EAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       287 ~~~~~~~~~~~~~g~~~~~~~~~~~l~---~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+.++.+++++.+|++++.+..+++++   ++++|++.+.+++..||+|+++
T Consensus       313 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          313 TSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            455677999999999998766677664   9999999999888889999975

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1e-50  Score=372.85  Aligned_cols=312  Identities=23%  Similarity=0.256  Sum_probs=268.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCC-CCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~-~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||++++.+|.   ++++|.|.|+ +++|||||||.++|||++|++.+.|..+.  .+|+++|||++|+|+++|+++++|
T Consensus         1 MkAvv~~~~g~---l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~--~~P~i~G~E~~G~V~~vG~~V~~~   75 (346)
T 4a2c_A            1 MKSVVNDTDGI---VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAH--YYPITLGHEFSGYIDAVGSGVDDL   75 (346)
T ss_dssp             CEEEEECSSSC---EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSS--SSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEecCCC---EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCC--CCCccccEEEEEEEEEECCCcccc
Confidence            99999999875   9999999998 57999999999999999999999887543  479999999999999999999999


Q ss_pred             CCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      ++||+|+...                           .+|+|+||++++++.++++|+++++++||+++ ++.+++++ .
T Consensus        76 ~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~~-~  153 (346)
T 4a2c_A           76 HPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLHA-F  153 (346)
T ss_dssp             CTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHHH-H
T ss_pred             cCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHHH-H
Confidence            9999997632                           35899999999999999999999999998654 44445544 4


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      ...++++|++|||          +| +|++|++++|+|+++|++ ++++++++++++.++++|++.++|+++.++.+.++
T Consensus       154 ~~~~~~~g~~VlV----------~G-aG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~  222 (346)
T 4a2c_A          154 HLAQGCENKNVII----------IG-AGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQS  222 (346)
T ss_dssp             HHTTCCTTSEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred             HHhccCCCCEEEE----------EC-CCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHH
Confidence            7789999999999          87 599999999999999985 56778899999999999999999999999988889


Q ss_pred             HHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCc--cccChhHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790          212 EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSE  288 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (335)
                      +.+++.++|+++||+|+. .+..++++++++|+++.+|......  ...+...++.+++++.|++........     .+
T Consensus       223 ~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~-----~~  297 (346)
T 4a2c_A          223 VLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWP-----GQ  297 (346)
T ss_dssp             HHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTT-----CH
T ss_pred             hhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcch-----HH
Confidence            999889999999999975 5788999999999999999776542  234456678899999998765432221     12


Q ss_pred             HHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          289 VEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       289 ~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .++.+++++.+|++  +++++++|+|+|+++|++.+++++..||+||+|
T Consensus       298 ~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          298 EWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             HHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             HHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence            24448899999986  456889999999999999999999999999987

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=7.1e-51  Score=378.06  Aligned_cols=311  Identities=21%  Similarity=0.270  Sum_probs=273.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.+.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         9 mkA~v~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (378)
T 3uko_A            9 CKAAVAYEPNKP--LVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ   85 (378)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEecCCCc--cEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCC-CCCCccCCccceEEEEEeCCCCCcCC
Confidence            899999998876  999999999999999999999999999999999998653 45799999999999999999999999


Q ss_pred             CCCEEEEecC-------------------------------------------------CcceeeEEEecCCceEeCCCC
Q 019790           81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      +||+|++...                                                 .|+|+||++++++.++++|++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  165 (378)
T 3uko_A           86 AGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPT  165 (378)
T ss_dssp             TTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCC
Confidence            9999986532                                                 158999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++++||++++++.|||+++.+..++++|++|||          +|+ |++|++++|+|+.+|+ +|+++++++++++.+
T Consensus       166 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV----------~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a  234 (378)
T 3uko_A          166 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAI----------FGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA  234 (378)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEE----------ECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH
T ss_pred             CCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            9999999999999999999988899999999999          985 9999999999999999 899999999999999


Q ss_pred             HHcCCCEEEeCC--CccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhc
Q 019790          191 KDLGADVCINYK--TEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAK  265 (335)
Q Consensus       191 ~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~  265 (335)
                      +++|++.++|+.  +.++.+.+++.+++ ++|++|||+|+. .+..++++++++ |+++.+|.... ...+++...++. 
T Consensus       235 ~~lGa~~vi~~~~~~~~~~~~i~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-  312 (378)
T 3uko_A          235 KKFGVNEFVNPKDHDKPIQEVIVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-  312 (378)
T ss_dssp             HTTTCCEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-
T ss_pred             HHcCCcEEEccccCchhHHHHHHHhcCC-CCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-
Confidence            999999999987  67889999999988 999999999984 678899999996 99999997653 234455555554 


Q ss_pred             ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++.++.+.....       .+.++.+++++.+|+++  ++++++|+|+|+++||+.+.+++.. |+|+++
T Consensus       313 ~~~i~g~~~~~~~~-------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          313 GRVWKGTAFGGFKS-------RTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             TCEEEECSGGGCCH-------HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEET
T ss_pred             CcEEEEEEecCCCc-------hHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEec
Confidence            88999887654322       12344588999999876  5679999999999999999888875 999875

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=7.9e-51  Score=372.39  Aligned_cols=307  Identities=29%  Similarity=0.408  Sum_probs=272.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence            999999988854  899999999999999999999999999999999987664456799999999999999999999999


Q ss_pred             CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+..                            ..+|+|+||++++++.++++|+++++++||+++++++|||+++.
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  158 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK  158 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            99999852                            13589999999999999999999999999999999999999996


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      +. ++++|++|||          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++|+.+.++.+.+++
T Consensus       159 ~~-~~~~g~~VlV----------~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~  226 (339)
T 1rjw_A          159 VT-GAKPGEWVAI----------YGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKE  226 (339)
T ss_dssp             HH-TCCTTCEEEE----------ECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHH
T ss_pred             hc-CCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHH
Confidence            54 8999999999          997 88999999999999999999999999999999999999999888888888888


Q ss_pred             HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          213 ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                      .+  .++|++|||+|. ..+..++++|+++|+++.+|..... ..++...++.+++++.++.....          +.++
T Consensus       227 ~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~  293 (339)
T 1rjw_A          227 KV--GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE-MPIPIFDTVLNGIKIIGSIVGTR----------KDLQ  293 (339)
T ss_dssp             HH--SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE-EEEEHHHHHHTTCEEEECCSCCH----------HHHH
T ss_pred             Hh--CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC-CccCHHHHHhCCcEEEEeccCCH----------HHHH
Confidence            87  379999999997 5678899999999999999876543 45667777889999998765431          1234


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+++++.+|++++. .++|+|+|+++|++.+.+++..||+|+++
T Consensus       294 ~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          294 EALQFAAEGKVKTI-IEVQPLEKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             HHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHcCCCCcc-EEEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence            48899999999886 47899999999999999988889999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-50  Score=374.51  Aligned_cols=310  Identities=25%  Similarity=0.307  Sum_probs=274.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|+|.++||+|||.+++||++|++.+.|..+  ..+|.++|||++|+|+++|+++++|+
T Consensus         7 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            7 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP--VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             EEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEcCCCCC--eEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC--CCCCcccCcccceEEEEeCCCCCCCC
Confidence            899999988755  89999999999999999999999999999999998754  34689999999999999999999999


Q ss_pred             CCCEEEEec-------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      +||+|++..                                                 .+|+|+||++++++.++++|++
T Consensus        83 ~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~  162 (371)
T 1f8f_A           83 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  162 (371)
T ss_dssp             TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCCC
Confidence            999998621                                                 2489999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++++||++++++.|||+++.+..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.+
T Consensus       163 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV----------~G-aG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          163 VPIELLGPLGCGIQTGAGACINALKVTPASSFVT----------WG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------ES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            9999999999999999999988889999999999          98 69999999999999999 699999999999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceE
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLT  268 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~  268 (335)
                      +++|++.++|+.+.++.+.+++.+++ ++|++|||+|. ..+..++++|+++|+++.+|.... ....++...++.++++
T Consensus       232 ~~lGa~~vi~~~~~~~~~~~~~~~~g-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  310 (371)
T 1f8f_A          232 KQLGATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKT  310 (371)
T ss_dssp             HHHTCSEEEETTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCE
T ss_pred             HHcCCCEEecCCccCHHHHHHHhcCC-CCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCE
Confidence            99999999999988888899998887 89999999997 567889999999999999987653 2346777778889999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+++......       .+.++.+++++.+|++++  ++++ |+|+|+++|++.+++++. +|+|++|
T Consensus       311 i~g~~~~~~~~-------~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          311 ILGVVEGSGSP-------KKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             EEECSGGGSCH-------HHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             EEEeCCCCCch-------HHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEee
Confidence            99987643211       234555999999999875  5677 999999999999988776 7999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.8e-50  Score=373.44  Aligned_cols=308  Identities=24%  Similarity=0.325  Sum_probs=268.7

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.|.|+|+++||+|||.+++||++|++.+.|..+  ..+|.++|||++|+|+++|+++++|+
T Consensus        10 mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~v~~~~   85 (373)
T 1p0f_A           10 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP--SKFPVILGHEAVGVVESIGAGVTCVK   85 (373)
T ss_dssp             EEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eEEEEEEcCCCC--eeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC--CCCCcccCcCceEEEEEECCCCCccC
Confidence            899999988755  89999999999999999999999999999999998765  45699999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|++..                                                ..|+|+||++++++.++++|+++
T Consensus        86 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  165 (373)
T 1p0f_A           86 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKA  165 (373)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTC
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEECCCCC
Confidence            999998752                                                13899999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      +++ ||++++++.|||+++.+..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       166 ~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~  233 (373)
T 1p0f_A          166 PLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAV----------FG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI  233 (373)
T ss_dssp             CGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             Chh-hhhhhhHHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence            999 99999999999999988889999999999          98 59999999999999999 8999999999999999


Q ss_pred             HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790          192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  266 (335)
                      ++|++.++|+.+  .++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... ....++...++.++
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~i~~~t~g-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  312 (373)
T 1p0f_A          234 ELGATECLNPKDYDKPIYEVICEKTNG-GVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR  312 (373)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC
T ss_pred             HcCCcEEEecccccchHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc
Confidence            999999998874  5688888888886 89999999997 5678899999999 99999987653 23456666666777


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                       ++.++.+......        .++.+++++.+|+++  ++++++|+|+++++|++.+++++. +|+|++|
T Consensus       313 -~i~g~~~~~~~~~--------~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          313 -SLKGSVFGGFKGE--------EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             -EEEECSGGGCCGG--------GHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             -eEEeeccCCcCHH--------HHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence             9988865433221        133488999999977  567899999999999999988775 7999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-50  Score=372.32  Aligned_cols=310  Identities=23%  Similarity=0.292  Sum_probs=270.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhh-hhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTL-QRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++++  +++++.|.|+|.++||+|||.+++||++|++ .+.|..+  ..+|.++|||++|+|+++|+++++|
T Consensus         9 mka~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~--~~~P~v~GhE~~G~V~~vG~~V~~~   84 (374)
T 1cdo_A            9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK--DGFPVVLGHEGAGIVESVGPGVTEF   84 (374)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT--TSCSEECCCCEEEEEEEECTTCCSC
T ss_pred             eEEEEEecCCCC--eEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC--CCCCcccCccceEEEEEECCCCccC
Confidence            899999988755  8899999999999999999999999999999 8888765  4568999999999999999999999


Q ss_pred             CCCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790           80 KVGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        80 ~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      ++||+|++..                                                .+|+|+||++++++.++++|++
T Consensus        85 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~  164 (374)
T 1cdo_A           85 QPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPS  164 (374)
T ss_dssp             CTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEECCCC
Confidence            9999998752                                                1389999999999999999999


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++++||++++++.|||+++.+..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.+
T Consensus       165 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          165 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAV----------FG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             CCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            9999999999999999999988889999999999          98 59999999999999999 899999999999999


Q ss_pred             HHcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCCCccccChhHHhhcc
Q 019790          191 KDLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKR  266 (335)
Q Consensus       191 ~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  266 (335)
                      +++|++.++|+.+  .++.+.+++.+++ ++|++|||+|. ..+..++++++++ |+++.+|.......+++...++.++
T Consensus       234 ~~lGa~~vi~~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~  312 (374)
T 1cdo_A          234 KVFGATDFVNPNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR  312 (374)
T ss_dssp             HHTTCCEEECGGGCSSCHHHHHHHHHTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC
T ss_pred             HHhCCceEEeccccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC
Confidence            9999999998874  5688888888876 89999999997 5678899999999 9999998765433456666777777


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                       ++.++.+.....       .+.++.+++++.+|+++  ++++++|+|+|+++|++.+++++. +|+|++|
T Consensus       313 -~i~g~~~~~~~~-------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          313 -TWKGSMFGGFKG-------KDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             -EEEECSGGGCCH-------HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             -eEEEEecCCCCc-------HHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence             998886543221       12345589999999987  567899999999999999988775 6999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-50  Score=370.32  Aligned_cols=310  Identities=23%  Similarity=0.399  Sum_probs=273.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|+|+++||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         6 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   83 (347)
T 2hcy_A            6 QKGVIFYESHGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWK   83 (347)
T ss_dssp             EEEEEESSTTCC--CEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             cEEEEEeCCCCC--CEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCc
Confidence            899999998854  899999999999999999999999999999999987664446799999999999999999999999


Q ss_pred             CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+..                            ..+|+|+||++++++.++++|+++++++||+++++++|||+++.
T Consensus        84 ~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  163 (347)
T 2hcy_A           84 IGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK  163 (347)
T ss_dssp             TTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHH
Confidence            99999852                            12589999999999999999999999999999999999999995


Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC-CccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-TEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~  211 (335)
                      + .++++|+++||          +|++|++|++++++++..|++|+++++++++.+.++++|++.++|.. ..++.+.++
T Consensus       164 ~-~~~~~g~~vlV----------~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~  232 (347)
T 2hcy_A          164 S-ANLMAGHWVAI----------SGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVL  232 (347)
T ss_dssp             T-TTCCTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHH
T ss_pred             h-cCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHH
Confidence            4 58999999999          99889999999999999999999999999999999999999988877 567888888


Q ss_pred             HHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHH
Q 019790          212 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE  290 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (335)
                      +.+.+ ++|++||++|. ..+..+++.|+++|+++.+|...+...+++...++.+++++.++.....          +.+
T Consensus       233 ~~~~~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~  301 (347)
T 2hcy_A          233 KATDG-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNR----------ADT  301 (347)
T ss_dssp             HHHTS-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCH----------HHH
T ss_pred             HHhCC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCH----------HHH
Confidence            88877 89999999997 5678899999999999999876644455677778889999998765431          123


Q ss_pred             HHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          291 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       291 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+++++.+|++++. .++|+|+|+++|++.+.+++..||+|+++
T Consensus       302 ~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          302 REALDFFARGLVKSP-IKVVGLSTLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             HHHHHHHHTTSCCCC-EEEEEGGGHHHHHHHHHTTCCSSEEEEES
T ss_pred             HHHHHHHHhCCCccc-eEEEcHHHHHHHHHHHHcCCcceeEEEec
Confidence            448899999999886 47899999999999999988889999875

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4.3e-50  Score=372.57  Aligned_cols=309  Identities=23%  Similarity=0.327  Sum_probs=269.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.+.|+|.++||+|||.+++||++|++.+.|. + ...+|.++|||++|+|+++|+++++|+
T Consensus         9 mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~-~~~~P~v~GhE~~G~V~~vG~~v~~~~   84 (376)
T 1e3i_A            9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K-KALFPVVLGHECAGIVESVGPGVTNFK   84 (376)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S-CCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C-CCCCCcccCccccEEEEEECCCCccCC
Confidence            899999988754  889999999999999999999999999999999886 3 235799999999999999999999999


Q ss_pred             CCCEEEEec----------------------------------------------------CCcceeeEEEecCCceEeC
Q 019790           81 VGDQVCALL----------------------------------------------------GGGGYAEKVAVPAGQVLPV  108 (335)
Q Consensus        81 ~Gd~V~~~~----------------------------------------------------~~g~~~~~~~~~~~~~~~~  108 (335)
                      +||+|++..                                                    ..|+|+||++++++.++++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  164 (376)
T 1e3i_A           85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV  164 (376)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccEEEC
Confidence            999998742                                                    1389999999999999999


Q ss_pred             CCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhH
Q 019790          109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL  187 (335)
Q Consensus       109 p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~  187 (335)
                      |+++++++||++++++.|||+++.+..++++|++|||          +| +|++|++++|+|+.+|+ +|++++++++++
T Consensus       165 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  233 (376)
T 1e3i_A          165 DDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAV----------FG-LGCVGLSAIIGCKIAGASRIIAIDINGEKF  233 (376)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence            9999999999999999999999988889999999999          98 59999999999999999 899999999999


Q ss_pred             HHHHHcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCCCccccChhHHh
Q 019790          188 AVCKDLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLF  263 (335)
Q Consensus       188 ~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~  263 (335)
                      +.++++|++.++|+.+  .++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.. .....++...++
T Consensus       234 ~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~-g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~-~~~~~~~~~~~~  311 (376)
T 1e3i_A          234 PKAKALGATDCLNPRELDKPVQDVITELTAG-GVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK-VDEMTIPTVDVI  311 (376)
T ss_dssp             HHHHHTTCSEEECGGGCSSCHHHHHHHHHTS-CBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS-SSEEEEEHHHHH
T ss_pred             HHHHHhCCcEEEccccccchHHHHHHHHhCC-CccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCC-CCccccCHHHhh
Confidence            9999999999998874  5688888888886 89999999997 5678899999999 999999873 333456667777


Q ss_pred             hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .++ ++.++.+.....       .+.++.+++++.+|+++  ++++++|+|+|+++|++.+++++. +|+|++|
T Consensus       312 ~~~-~i~g~~~~~~~~-------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  376 (376)
T 1e3i_A          312 LGR-SINGTFFGGWKS-------VDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS-IRTILTF  376 (376)
T ss_dssp             TTC-EEEECSGGGCCH-------HHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             ccC-eEEEEecCCCCc-------HHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCc-ceEEEeC
Confidence            788 998876543211       22345589999999976  567899999999999999988774 7999875

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3e-50  Score=369.78  Aligned_cols=310  Identities=29%  Similarity=0.410  Sum_probs=274.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-------CCCCCCCCCCceEEEEEEec
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------PKGASPYPGLECSGTILSVG   73 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-------~~~~p~~~G~e~~G~V~~vG   73 (335)
                      |||+++..++.+  +++++.|.|+|+++||+|||.+++||++|++.+.|.++.       ...+|.++|||++|+|+++|
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   78 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (347)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEecCCCC--eEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence            999999998754  899999999999999999999999999999999886542       23568999999999999999


Q ss_pred             CCCCCCCCCCEEEEec---------------------------CCcceeeEEEecC-CceEeCCCCCChhhhccCcchHH
Q 019790           74 KNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPA-GQVLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        74 ~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~-~~~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +++++|++||+|+++.                           .+|+|+||+++++ +.++++ +++++++|++++++++
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~  157 (347)
T 1jvb_A           79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGI  157 (347)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHH
T ss_pred             CCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHH
Confidence            9999999999997642                           3589999999999 999999 9999999999999999


Q ss_pred             HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790          126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTE  204 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~  204 (335)
                      |||+++. ..++++++++||          +|+.|++|++++|+++.. |++|+++++++++.+.++++|++.++|+.+.
T Consensus       158 ta~~~l~-~~~~~~g~~vlV----------~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~  226 (347)
T 1jvb_A          158 TTYRAVR-KASLDPTKTLLV----------VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQ  226 (347)
T ss_dssp             HHHHHHH-HTTCCTTCEEEE----------ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTS
T ss_pred             HHHHHHH-hcCCCCCCEEEE----------ECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCc
Confidence            9999994 588999999999          998779999999999999 9999999999999999999999999999888


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      ++.+.+.+.+...++|++|||+|+. .+..+++.|+++|+++.+|...... .++...++.+++++.++.....      
T Consensus       227 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~------  299 (347)
T 1jvb_A          227 DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQ------  299 (347)
T ss_dssp             CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCH------
T ss_pred             cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCH------
Confidence            8888888887623899999999987 6788999999999999998765222 6777778889999998765431      


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                          +.++.+++++++|++++.++++|+|+++++|++.+++++..||+|++|
T Consensus       300 ----~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          300 ----SDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             ----HHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             ----HHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence                224458999999999999889999999999999999988889999976

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=8.4e-50  Score=370.38  Aligned_cols=310  Identities=24%  Similarity=0.341  Sum_probs=270.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+  +++++.|.|+|.++||+|||.+++||++|++.+.|..+..  +|.++|||++|+|+++|+++++|+
T Consensus         9 mkA~~~~~~g~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~--~P~v~GhE~~G~V~~vG~~v~~~~   84 (374)
T 2jhf_A            9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP--LPVIAGHEAAGIVESIGEGVTTVR   84 (374)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC--SSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             EEEEEEecCCCc--eEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC--CCcccCcCceEEEEEECCCCCCCC
Confidence            899999988755  8999999999999999999999999999999999876532  699999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|++..                                                ..|+|+||++++++.++++|+++
T Consensus        85 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  164 (374)
T 2jhf_A           85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAS  164 (374)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTC
T ss_pred             CCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECCCCC
Confidence            999998752                                                13899999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||++++++.|||+++.+..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       165 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~  233 (374)
T 2jhf_A          165 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV----------FG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK  233 (374)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHhhhhccHHHHHHHHHHhccCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            999999999999999999988889999999999          98 69999999999999999 8999999999999999


Q ss_pred             HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790          192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  266 (335)
                      ++|++.++|+.+  .++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... ....++...++.++
T Consensus       234 ~lGa~~vi~~~~~~~~~~~~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  312 (374)
T 2jhf_A          234 EVGATECVNPQDYKKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR  312 (374)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC
T ss_pred             HhCCceEecccccchhHHHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC
Confidence            999999998874  5688888888876 89999999997 5678899999999 99999987653 23456666677778


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                       ++.++++.....       .+.++.+++++++|+++  ++++++|+|+|+++|++.+.+++. +|+|++|
T Consensus       313 -~i~g~~~~~~~~-------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          313 -TWKGAIFGGFKS-------KDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             -EEEECSGGGCCH-------HHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             -eEEEeccCCCCh-------HHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence             998886543221       12345589999999987  467899999999999999988775 6999875

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=3.5e-51  Score=371.11  Aligned_cols=303  Identities=20%  Similarity=0.251  Sum_probs=249.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..  .++.+++++.+.|+|++|||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         5 Mka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~   81 (315)
T 3goh_A            5 HQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPIN-WSNGHVPGVDGAGVIVKVGAKVDSKM   81 (315)
T ss_dssp             EEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTC-CCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred             eEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCc-CCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence            89999996  3456999999999999999999999999999999999987654 35799999999999999999999999


Q ss_pred             CCCEEEEecC---CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790           81 VGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        81 ~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      +||+|++...   +|+|+||++++++.++++|+++++++||+++++++|||+++ +..++++|++|||          +|
T Consensus        82 vGdrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV----------~G  150 (315)
T 3goh_A           82 LGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLI----------VG  150 (315)
T ss_dssp             TTCEEEEECCTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEE----------EC
T ss_pred             CCCEEEEeCCCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEE----------EC
Confidence            9999998763   79999999999999999999999999999999999999999 8899999999999          99


Q ss_pred             ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcc
Q 019790          158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS  237 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (335)
                      + |++|++++|+|+.+|++|++++ ++++++.++++|++.+++  +   .+.+     +.++|++|||+|+..+..++++
T Consensus       151 a-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~--d---~~~v-----~~g~Dvv~d~~g~~~~~~~~~~  218 (315)
T 3goh_A          151 F-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYR--E---PSQV-----TQKYFAIFDAVNSQNAAALVPS  218 (315)
T ss_dssp             C-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEES--S---GGGC-----CSCEEEEECC-------TTGGG
T ss_pred             C-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEc--C---HHHh-----CCCccEEEECCCchhHHHHHHH
Confidence            8 9999999999999999999999 999999999999999884  1   2222     5689999999999888889999


Q ss_pred             ccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccch---hhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 019790          238 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST---ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE  314 (335)
Q Consensus       238 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~  314 (335)
                      |+++|+++.+|.....    .....+.+.+.+....+.....   ........+.++.+++++++|+++++++++|+|++
T Consensus       219 l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~  294 (315)
T 3goh_A          219 LKANGHIICIQDRIPA----PIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQ  294 (315)
T ss_dssp             EEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEEEGGG
T ss_pred             hcCCCEEEEEeCCCCc----cccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEecHHH
Confidence            9999999999754321    1112233455555555433211   11112345567789999999999999999999999


Q ss_pred             HHHHHHHHHhCCCceeEEEeC
Q 019790          315 AAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       315 ~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +++|++.+.  +..||+|+++
T Consensus       295 ~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          295 MIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HHHHHHHHH--HHCCCEEEES
T ss_pred             HHHHHHHHH--hcCCcEEEEe
Confidence            999999998  5668999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=7.4e-50  Score=370.66  Aligned_cols=311  Identities=25%  Similarity=0.338  Sum_probs=270.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.+.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         7 mkA~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~   83 (373)
T 2fzw_A            7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGVTKLK   83 (373)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCC-CCCCccccccccEEEEEECCCCCCCC
Confidence            899999988754  899999999999999999999999999999999987643 34699999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|++..                                                ..|+|+||++++++.++++|+++
T Consensus        84 vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l  163 (373)
T 2fzw_A           84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLA  163 (373)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCCCC
Confidence            999998752                                                13899999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||++++++.|||+++.+..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus       164 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV----------~G-aG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~  232 (373)
T 2fzw_A          164 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAV----------FG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK  232 (373)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            999999999999999999988889999999999          98 59999999999999999 8999999999999999


Q ss_pred             HcCCCEEEeCCC--ccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCC-CEEEEEeccCC-CccccChhHHhhcc
Q 019790          192 DLGADVCINYKT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKR  266 (335)
Q Consensus       192 ~~g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~  266 (335)
                      ++|++.++|+.+  .++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|.... ...+++...++.++
T Consensus       233 ~lGa~~vi~~~~~~~~~~~~v~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~  311 (373)
T 2fzw_A          233 EFGATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR  311 (373)
T ss_dssp             HHTCSEEECGGGCSSCHHHHHHHHTTS-CBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC
T ss_pred             HcCCceEeccccccccHHHHHHHHhCC-CCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC
Confidence            999999998875  5688888888876 89999999997 5678899999999 99999987653 23456666677777


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                       ++.++.+.....       .+.++.+++++++|+++  ++++++|+|+++++|++.+++++. +|+|++|
T Consensus       312 -~i~g~~~~~~~~-------~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          312 -TWKGTAFGGWKS-------VESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             -EEEECSGGGCCH-------HHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             -EEEEeccCCCCc-------HHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence             998876543211       12345589999999987  567899999999999999988776 6999875

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-50  Score=374.36  Aligned_cols=307  Identities=23%  Similarity=0.323  Sum_probs=270.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC---
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS---   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~---   77 (335)
                      |||+++..++  +.+++++.+.|+|+++||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++| +++   
T Consensus        18 mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~~P~v~GhE~~G~V~~vG-~V~~~~   93 (380)
T 1vj0_A           18 AHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP-RVPLPIILGHEGAGRVVEVN-GEKRDL   93 (380)
T ss_dssp             EEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT-TCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred             eEEEEEecCC--CCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC-CCCCCcccCcCcEEEEEEeC-Cccccc
Confidence            8999999987  3499999999999999999999999999999999998654 23468999999999999999 999   


Q ss_pred             ---CCCCCCEEEEe------------------------------------cCCcceeeEEEe-cCCceEeCCCCCChh-h
Q 019790           78 ---RWKVGDQVCAL------------------------------------LGGGGYAEKVAV-PAGQVLPVPSGVSLK-D  116 (335)
Q Consensus        78 ---~~~~Gd~V~~~------------------------------------~~~g~~~~~~~~-~~~~~~~~p~~~~~~-~  116 (335)
                         +|++||+|++.                                    ..+|+|+||+++ +++.++++|++++++ +
T Consensus        94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~  173 (380)
T 1vj0_A           94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVL  173 (380)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHH
T ss_pred             cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCChHHh
Confidence               99999999974                                    125999999999 999999999999999 6


Q ss_pred             hccCcchHHHHHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcC
Q 019790          117 AAAFPEVACTVWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG  194 (335)
Q Consensus       117 aa~~~~~~~~a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g  194 (335)
                      |+.++ +++|||+++ +..+ +++|++|||          +| +|++|++++|+|+.+| ++|+++++++++++.++++|
T Consensus       174 Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV----------~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lG  240 (380)
T 1vj0_A          174 AMAMC-SGATAYHAF-DEYPESFAGKTVVI----------QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIG  240 (380)
T ss_dssp             HHHTT-HHHHHHHHH-HTCSSCCBTCEEEE----------EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTT
T ss_pred             Hhhhc-HHHHHHHHH-HhcCCCCCCCEEEE----------EC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcC
Confidence            66555 999999999 5678 999999999          99 8999999999999999 59999999999999999999


Q ss_pred             CCEEEeCC---CccHHHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccC-CCccccChhH-HhhcceE
Q 019790          195 ADVCINYK---TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITS-LFAKRLT  268 (335)
Q Consensus       195 ~~~~~~~~---~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~-~~~~~~~  268 (335)
                      ++.+++++   +.++.+.+++.+++.++|++|||+|+ ..+..++++|+++|+++.+|... .....++... ++.++++
T Consensus       241 a~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~  320 (380)
T 1vj0_A          241 ADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNAT  320 (380)
T ss_dssp             CSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCE
T ss_pred             CcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeE
Confidence            99999987   67788889999888889999999997 46888999999999999999776 4235677777 7889999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHC--CccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAV--GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+++...          .+.++.+++++++  |+++++++++|+|+|+++|++.+++++.. |+|+++
T Consensus       321 i~g~~~~~----------~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          321 FKGIWVSD----------TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             EEECCCCC----------HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             EEEeecCC----------HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEe
Confidence            99986642          1234458999999  99988889999999999999999998887 999875

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=8.9e-51  Score=376.08  Aligned_cols=305  Identities=22%  Similarity=0.360  Sum_probs=270.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.   +++++.|.|+|++|||+|||.+++||++|++.+.|.++  ..+|.++|||++|+|+++|+++++|+
T Consensus        24 mkA~v~~~~~~---l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~p~v~G~e~~G~V~~vG~~v~~~~   98 (370)
T 4ej6_A           24 MKAVRLESVGN---ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP--STPPVTLGHEFCGIVVEAGSAVRDIA   98 (370)
T ss_dssp             EEEEEEEETTE---EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC--CCSSEECCCSEEEEEEEECTTCCSSC
T ss_pred             eEEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC--CCCCeecCcceEEEEEEECCCCCCCC
Confidence            89999998754   99999999999999999999999999999999999763  34689999999999999999999999


Q ss_pred             CCCEEEEe---------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH
Q 019790           81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM  133 (335)
Q Consensus        81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~  133 (335)
                      +||+|++.                           ..+|+|+||++++.+.++++|+++++++|| +..++++||+++ +
T Consensus        99 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~  176 (370)
T 4ej6_A           99 PGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-D  176 (370)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-H
T ss_pred             CCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-H
Confidence            99999862                           246999999999999999999999999998 788999999999 7


Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      ..++++|++|||          +|+ |++|++++|+|+++|+ +|+++++++++++.++++|++.++|+++.++.+.+++
T Consensus       177 ~~~~~~g~~VlV----------~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~  245 (370)
T 4ej6_A          177 LSGIKAGSTVAI----------LGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAG  245 (370)
T ss_dssp             HHTCCTTCEEEE----------ECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHS
T ss_pred             hcCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHh
Confidence            889999999999          985 9999999999999999 8999999999999999999999999999999888888


Q ss_pred             ---HhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceEEEEeeccccchhhHHHHHH
Q 019790          213 ---ETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVS  287 (335)
Q Consensus       213 ---~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (335)
                         .+++ ++|++|||+|+ ..+..++++|+++|+++.+|..... ..+++...++.+++++.|++.....         
T Consensus       246 ~~~~~~g-g~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---------  315 (370)
T 4ej6_A          246 PVGLVPG-GVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFV---------  315 (370)
T ss_dssp             TTSSSTT-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTC---------
T ss_pred             hhhccCC-CCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHH---------
Confidence               7766 89999999996 5688999999999999999876653 4577888899999999998765422         


Q ss_pred             HHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 019790          288 EVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  335 (335)
Q Consensus       288 ~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  335 (335)
                        ++.+++++.+|++  +++++++|+|+++++|++.+.+++ ..+|++++|
T Consensus       316 --~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~  364 (370)
T 4ej6_A          316 --HRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSA  364 (370)
T ss_dssp             --HHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC-
T ss_pred             --HHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcc
Confidence              2338899999998  456889999999999999998776 456887764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4.7e-51  Score=387.96  Aligned_cols=315  Identities=23%  Similarity=0.375  Sum_probs=274.9

Q ss_pred             CEEEEEcCCC-------------CCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC----------------
Q 019790            1 MKAIVITQPG-------------SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY----------------   51 (335)
Q Consensus         1 mka~~~~~~~-------------~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~----------------   51 (335)
                      |||+++..++             ..+.+++++.|.|+|+++||+|||.++|||++|++...+..                
T Consensus        31 mkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~  110 (456)
T 3krt_A           31 YRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDL  110 (456)
T ss_dssp             EEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHH
T ss_pred             eEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhccccccc
Confidence            7999999762             23569999999999999999999999999999987653321                


Q ss_pred             CCCCCCC-CCCCCceEEEEEEecCCCCCCCCCCEEEEecC---------------------------CcceeeEEEecCC
Q 019790           52 PPPKGAS-PYPGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGGYAEKVAVPAG  103 (335)
Q Consensus        52 ~~~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~~~~~~~~~~  103 (335)
                      .....+| .++|||++|+|+++|+++++|++||+|++.+.                           +|+|+||++++.+
T Consensus       111 ~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~  190 (456)
T 3krt_A          111 AKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSN  190 (456)
T ss_dssp             HHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSEEEEEGG
T ss_pred             cccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCCCcccceEEechH
Confidence            0112356 58999999999999999999999999998541                           4999999999999


Q ss_pred             ceEeCCCCCChhhhccCcchHHHHHHHHHHh--cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe
Q 019790          104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA  181 (335)
Q Consensus       104 ~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~--~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~  181 (335)
                      .++++|+++++++||+++.+++|||+++...  .++++|++|||          +|++|++|++++|+|+.+|++|++++
T Consensus       191 ~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV----------~GasG~vG~~avqlak~~Ga~vi~~~  260 (456)
T 3krt_A          191 QLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLI----------WGASGGLGSYATQFALAGGANPICVV  260 (456)
T ss_dssp             GEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             HeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEE----------ECCCCHHHHHHHHHHHHcCCeEEEEE
Confidence            9999999999999999999999999999654  78999999999          99889999999999999999999999


Q ss_pred             cChhhHHHHHHcCCCEEEeCCCccH-----------------HHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEE
Q 019790          182 GSEEKLAVCKDLGADVCINYKTEDF-----------------VARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL  244 (335)
Q Consensus       182 ~~~~~~~~~~~~g~~~~~~~~~~~~-----------------~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~  244 (335)
                      +++++++.++++|++.++|+.+.++                 .+.+++.+++.++|++|||+|+..+..++++++++|++
T Consensus       261 ~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~i  340 (456)
T 3krt_A          261 SSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTI  340 (456)
T ss_dssp             SSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEE
T ss_pred             CCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEE
Confidence            9999999999999999999877543                 47888899888999999999998889999999999999


Q ss_pred             EEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 019790          245 FIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES  324 (335)
Q Consensus       245 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~  324 (335)
                      +.+|...+....++...++.+++++.|+.......          +..+++++++|++++.++++|+|+++++|++.+.+
T Consensus       341 v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----------~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~  410 (456)
T 3krt_A          341 TTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYRE----------AWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHR  410 (456)
T ss_dssp             EESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHH----------HHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHT
T ss_pred             EEEecCCCcccccCHHHHHhcCeEEEEeccCCHHH----------HHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHh
Confidence            99998766555677778888999999987654321          12378999999999999999999999999999999


Q ss_pred             CCCceeEEEeC
Q 019790          325 SQHIGKIMLVP  335 (335)
Q Consensus       325 ~~~~gkvvi~~  335 (335)
                      ++..||+|+.+
T Consensus       411 ~~~~GKvvv~~  421 (456)
T 3krt_A          411 NLHQGKVGVLC  421 (456)
T ss_dssp             TCSSSEEEEES
T ss_pred             CCCCCcEEEEe
Confidence            99999998864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=9.6e-51  Score=372.46  Aligned_cols=307  Identities=28%  Similarity=0.364  Sum_probs=269.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++++  +++++.|.|+|+++||+|||.++|||++|++.+.|..+.  ...+|.++|||++|+|+++|+++++
T Consensus         1 Mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR   78 (343)
T ss_dssp             CEEEEECSSSSS--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CeEEEEeCCCCc--EEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence            999999998865  899999999999999999999999999999999986531  2346899999999999999999999


Q ss_pred             CCCCCEEEEe---------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           79 WKVGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        79 ~~~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      |++||+|++.                           ..+|+|+||++++++.++++|+++++++||++ .++.|||+++
T Consensus        79 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l  157 (343)
T 2dq4_A           79 PQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTV  157 (343)
T ss_dssp             SCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            9999999974                           24699999999999999999999999999876 6788999999


Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                      .+..++ +|++|||          +|+ |++|++++|+|+.+|+ +|+++++++++++.++++ ++.++|+++.++.+.+
T Consensus       158 ~~~~~~-~g~~VlV----------~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~  224 (343)
T 2dq4_A          158 YAGSGV-SGKSVLI----------TGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVV  224 (343)
T ss_dssp             HSTTCC-TTSCEEE----------ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHH
T ss_pred             HHhCCC-CCCEEEE----------ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHH
Confidence            547888 9999999          997 9999999999999999 999999999999999999 9999999888898889


Q ss_pred             HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccCh-hHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790          211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSE  288 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (335)
                      ++.+ +.++|++|||+|+ ..+..++++|+++|+++.+|.... ...++. ..++.+++++.++.....         .+
T Consensus       225 ~~~~-~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---------~~  293 (343)
T 2dq4_A          225 RRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-PIRFDLAGELVMRGITAFGIAGRRL---------WQ  293 (343)
T ss_dssp             HHHH-SSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CEEECHHHHTGGGTCEEEECCSCCT---------TH
T ss_pred             HHhc-CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CceeCcHHHHHhCceEEEEeecCCC---------HH
Confidence            9888 6789999999998 567889999999999999987543 345677 777889999999865411         11


Q ss_pred             HHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          289 VEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       289 ~~~~~~~~~~~g~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .++.+++++++|+  ++++++++|+|+++++|++.+++++. ||+|+++
T Consensus       294 ~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          294 TWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             HHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEET
T ss_pred             HHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEee
Confidence            2344889999998  56778899999999999999998887 9999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.1e-50  Score=369.52  Aligned_cols=309  Identities=19%  Similarity=0.278  Sum_probs=268.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhh-hhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTL-QRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~-~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..+++   +++++.|.|+|+++||+|||.+++||++|++ .+.|..+.  .+|.++|||++|+|+++|+++++|
T Consensus         1 MkA~~~~~~~~---~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~--~~p~v~G~E~~G~V~~vG~~v~~~   75 (352)
T 3fpc_A            1 MKGFAMLSIGK---VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE--RHNMILGHEAVGEVVEVGSEVKDF   75 (352)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCC--CSSEECCCEEEEEEEEECTTCCSC
T ss_pred             CeEEEEccCCC---ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCC--CCCcccCCcceEEEEEECCCCCcC
Confidence            99999998876   8899999999999999999999999999999 56887653  468999999999999999999999


Q ss_pred             CCCCEEEEec------------------------------CCcceeeEEEecCC--ceEeCCCCCChhhhccCcchHHHH
Q 019790           80 KVGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV  127 (335)
Q Consensus        80 ~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~~~~~~a  127 (335)
                      ++||+|+...                              .+|+|+||+.++..  .++++|+++++++|++++.+++||
T Consensus        76 ~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta  155 (352)
T 3fpc_A           76 KPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTG  155 (352)
T ss_dssp             CTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHH
T ss_pred             CCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHH
Confidence            9999998631                              46999999999976  899999999999999999999999


Q ss_pred             HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      |+++ +..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.++++|++.++|+++.++
T Consensus       156 ~~al-~~~~~~~g~~VlV----------~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~  223 (352)
T 3fpc_A          156 FHGA-ELANIKLGDTVCV----------IG-IGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDI  223 (352)
T ss_dssp             HHHH-HHTTCCTTCCEEE----------EC-CSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCH
T ss_pred             HHHH-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCH
Confidence            9999 7889999999999          98 69999999999999999 8999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCC-ccccChh--HHhhcceEEEEeeccccchhhH
Q 019790          207 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNIT--SLFAKRLTVQAAGLRSRSTENK  282 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  282 (335)
                      .+.+++.+++.++|++|||+|+ ..+..++++|+++|+++.+|..... ..+++..  .+..+++++.++.....     
T Consensus       224 ~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----  298 (352)
T 3fpc_A          224 VEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGG-----  298 (352)
T ss_dssp             HHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCH-----
T ss_pred             HHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCc-----
Confidence            9999999999899999999999 5689999999999999999876532 1222222  22357888888754321     


Q ss_pred             HHHHHHHHHHHHHHHHCCcccc--ccccccc-hhhHHHHHHHHHhCCC-ceeEEEeC
Q 019790          283 ALIVSEVEKNVWPAIAVGKVKP--VIYKYLP-LCEAAEAHQLMESSQH-IGKIMLVP  335 (335)
Q Consensus       283 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~-l~~~~~a~~~~~~~~~-~gkvvi~~  335 (335)
                          ...++.+++++.+|++++  +++++|+ |+++++|++.+++++. .+|+|+++
T Consensus       299 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          299 ----RLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             ----HHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             ----hhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence                112445899999999876  4789999 9999999999988654 48999875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=2e-50  Score=371.01  Aligned_cols=308  Identities=30%  Similarity=0.402  Sum_probs=269.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcC-CCC-CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYP-PPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++.  .+++++.|.|+|+++||+|||.+++||++|++.+.| .++ ....+|.++|||++|+|+++|+++++
T Consensus         5 mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   82 (348)
T 2d8a_A            5 MVAIMKTKPGY--GAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG   82 (348)
T ss_dssp             EEEEEECSSSS--SCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             ceEEEEECCCC--CEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence            79999998874  489999999999999999999999999999999988 432 11346899999999999999999999


Q ss_pred             CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      |++||+|++..                           .+|+|+||++++++.++++|+++++++||++ .+++|||+++
T Consensus        83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l  161 (348)
T 2d8a_A           83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQ-EPLGNAVDTV  161 (348)
T ss_dssp             CCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTH-HHHHHHHHHH
T ss_pred             CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhh-hHHHHHHHHH
Confidence            99999998752                           3599999999999999999999999999876 4888999999


Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                       +..++ +|++|||          +|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++|+++.++.+.+
T Consensus       162 -~~~~~-~g~~VlV----------~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v  228 (348)
T 2d8a_A          162 -LAGPI-SGKSVLI----------TGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEV  228 (348)
T ss_dssp             -TTSCC-TTCCEEE----------ECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHH
T ss_pred             -HhcCC-CCCEEEE----------ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHH
Confidence             77888 9999999          997 9999999999999999 99999999999999999999999999888898999


Q ss_pred             HHHhCCCcccEEEeCCCh-hhHHHhhccccCCCEEEEEeccCCCccccCh-hHHhhcceEEEEeeccccchhhHHHHHHH
Q 019790          211 KEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRSRSTENKALIVSE  288 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (335)
                      ++.+++.++|++|||+|. ..+..++++++++|+++.+|.... ...++. ..++.+++++.++.....         .+
T Consensus       229 ~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---------~~  298 (348)
T 2d8a_A          229 MDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG-KVTIDFNNLIIFKALTIYGITGRHL---------WE  298 (348)
T ss_dssp             HHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS-CCCCCHHHHTTTTTCEEEECCCCCS---------HH
T ss_pred             HHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC-CcccCchHHHHhCCcEEEEecCCCc---------HH
Confidence            999888899999999997 567889999999999999987654 345666 677889999998765421         12


Q ss_pred             HHHHHHHHHHCCcc--ccccccccc-hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          289 VEKNVWPAIAVGKV--KPVIYKYLP-LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       289 ~~~~~~~~~~~g~~--~~~~~~~~~-l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .++.+++++++|++  +++++++|+ |+|+++|++.+++ +..||+|+++
T Consensus       299 ~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          299 TWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             HHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             HHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEee
Confidence            24458999999984  677789999 9999999999977 5678999875

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.7e-49  Score=367.71  Aligned_cols=313  Identities=20%  Similarity=0.264  Sum_probs=263.5

Q ss_pred             CEEEEEcCCCCCcceEEE-eecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~-~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.   ++++ +.+.|+|++|||+|||.+++||++|++.+.+..    .+|.++|||++|+|+++|+++++|
T Consensus        12 mkA~v~~~~~~---l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~p~v~G~e~~G~V~~vG~~v~~~   84 (371)
T 3gqv_A           12 QTALTVNDHDE---VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFA----TPWAFLGTDYAGTVVAVGSDVTHI   84 (371)
T ss_dssp             EEEEEECTTSC---EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----C----CTTSCCCSEEEEEEEEECTTCCSC
T ss_pred             ceeEEEcCCCc---eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCC----CCCccCccccEEEEEEeCCCCCCC
Confidence            89999998754   9998 999999999999999999999999999887632    248999999999999999999999


Q ss_pred             CCCCEEEEec--------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHh-cCC-----------CC
Q 019790           80 KVGDQVCALL--------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT-SHL-----------SP  139 (335)
Q Consensus        80 ~~Gd~V~~~~--------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~-~~~-----------~~  139 (335)
                      ++||+|++.+        .+|+|+||++++.+.++++|+++++++||+++.+++|||+++.+. .++           ++
T Consensus        85 ~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~  164 (371)
T 3gqv_A           85 QVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSK  164 (371)
T ss_dssp             CTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSS
T ss_pred             CCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCC
Confidence            9999999987        369999999999999999999999999999999999999999777 553           89


Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      |++|||          +|++|++|++++|+|+.+|++|++++ ++++++.++++|++.++|+++.++.+.+++.++++ +
T Consensus       165 g~~VlV----------~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~-~  232 (371)
T 3gqv_A          165 PVYVLV----------YGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNN-L  232 (371)
T ss_dssp             CCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTC-C
T ss_pred             CcEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCC-c
Confidence            999999          99889999999999999999999987 88999999999999999999999999999999874 9


Q ss_pred             cEEEeCCChh-hHHHhhccc-cCCCEEEEEeccCCC-----ccc---cChhHHhhcceEEEEeeccccchhhHHHHHHHH
Q 019790          220 DVILDCMGAS-YFQRNLGSL-NIDGRLFIIGTQGGA-----KTE---LNITSLFAKRLTVQAAGLRSRSTENKALIVSEV  289 (335)
Q Consensus       220 d~vid~~g~~-~~~~~~~~l-~~~G~~v~~g~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (335)
                      |++|||+|+. .+..++++| +++|+++.+|.....     ...   .....++.+++++.+++....... ......+.
T Consensus       233 d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~-~~~~~~~~  311 (371)
T 3gqv_A          233 RYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEE-ERQFGEDL  311 (371)
T ss_dssp             CEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHH-HHHHHHHH
T ss_pred             cEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHH-HHHHHHHH
Confidence            9999999984 578889999 589999999865431     111   112356678888887754433322 22334556


Q ss_pred             HHHHHHHHHCCcccccc--ccccchhhHHHHHHHHHhCCCceeEEE
Q 019790          290 EKNVWPAIAVGKVKPVI--YKYLPLCEAAEAHQLMESSQHIGKIML  333 (335)
Q Consensus       290 ~~~~~~~~~~g~~~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvi  333 (335)
                      ++.+++++.+|++++.+  ++.|+|+++++|++.+.+++..||.|+
T Consensus       312 ~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvv  357 (371)
T 3gqv_A          312 WRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLV  357 (371)
T ss_dssp             HHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEE
T ss_pred             HHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEE
Confidence            66799999999988854  455999999999999999988885444

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=2.6e-50  Score=370.32  Aligned_cols=299  Identities=18%  Similarity=0.234  Sum_probs=261.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  +++++.+.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|+
T Consensus         5 mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~V~~vG~~v~~~~   81 (348)
T 3two_A            5 SKGFAIFSKDEH--FKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE-GIYPMIPGHEIAGIIKEVGKGVKKFK   81 (348)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCC
Confidence            799999987654  999999999999999999999999999999999998654 35799999999999999999999999


Q ss_pred             CCCEEEEec-------------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcch
Q 019790           81 VGDQVCALL-------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEV  123 (335)
Q Consensus        81 ~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~  123 (335)
                      +||+|+...                                     .+|+|+||++++++.++++|+++++++||+++++
T Consensus        82 vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  161 (348)
T 3two_A           82 IGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA  161 (348)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTH
T ss_pred             CCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhh
Confidence            999997531                                     1299999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC
Q 019790          124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT  203 (335)
Q Consensus       124 ~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~  203 (335)
                      +.|||+++. ..++++|++|||          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++ .+.
T Consensus       162 ~~ta~~~l~-~~~~~~g~~VlV----------~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~  228 (348)
T 3two_A          162 GITTYSPLK-FSKVTKGTKVGV----------AGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDP  228 (348)
T ss_dssp             HHHHHHHHH-HTTCCTTCEEEE----------ESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSG
T ss_pred             HHHHHHHHH-hcCCCCCCEEEE----------ECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCH
Confidence            999999995 459999999999          985 9999999999999999999999999999999999999988 322


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccC-CCccccChhHHh-hcceEEEEeeccccchh
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLF-AKRLTVQAAGLRSRSTE  280 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  280 (335)
                      ..    +    . .++|++|||+|+. .+..++++|+++|+++.+|... .....++...++ .+++++.++......  
T Consensus       229 ~~----~----~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--  297 (348)
T 3two_A          229 KQ----C----K-EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIK--  297 (348)
T ss_dssp             GG----C----C-SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHH--
T ss_pred             HH----H----h-cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHH--
Confidence            21    1    1 1799999999997 7899999999999999998766 332226667777 899999998765431  


Q ss_pred             hHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          281 NKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                              .++.+++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       298 --------~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          298 --------ETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             --------HHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             --------HHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEec
Confidence                    134488999999999865 7999999999999999999889999974

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-49  Score=364.33  Aligned_cols=307  Identities=22%  Similarity=0.289  Sum_probs=265.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcC-CCC-CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKG-SYP-PPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g-~~~-~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++   .+++++.+.|+|+++||+|||.+++||++|++.+.+ ..+ ....+|.++|||++|+|+++|+++++
T Consensus         5 mka~~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            5 NLSAVLYKQN---DLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             CEEEEEEcCC---cEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            8999999765   499999999999999999999999999999998873 322 12246899999999999999999999


Q ss_pred             CCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~  130 (335)
                      |++||+|++..                            .+|+|+||++++++.++++|+++++++||.+ .+++|||++
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~a  160 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHA  160 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHH
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHH
Confidence            99999998742                            3699999999999999999999999999854 688899999


Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHH
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVAR  209 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~  209 (335)
                      + +..++++|++|||          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++++++ .++.+.
T Consensus       161 l-~~~~~~~g~~VlV----------~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~  228 (352)
T 1e3j_A          161 C-RRAGVQLGTTVLV----------IGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESS  228 (352)
T ss_dssp             H-HHHTCCTTCEEEE----------ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHH
T ss_pred             H-HhcCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHH
Confidence            9 7789999999999          984 99999999999999999999999999999999999999999885 677778


Q ss_pred             HHHHhC---CCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790          210 VKEETG---GKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI  285 (335)
Q Consensus       210 ~~~~~~---~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (335)
                      +++.++   +.++|++|||+|+. .+..++++|+++|+++.+|.... ..+++...++.+++++.++....   .     
T Consensus       229 i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~-----  299 (352)
T 1e3j_A          229 IIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIKSVFRYC---N-----  299 (352)
T ss_dssp             HHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS-CCCCCHHHHHTTTCEEEECCSCS---S-----
T ss_pred             HHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CccccHHHHHhcCcEEEEeccch---H-----
Confidence            888775   56899999999986 57889999999999999986442 34577778889999999876531   1     


Q ss_pred             HHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 019790          286 VSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP  335 (335)
Q Consensus       286 ~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~  335 (335)
                         .++.+++++.+|++  +++++++|+|+++++|++.+.+++ ..+|+|+++
T Consensus       300 ---~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          300 ---DYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             ---CHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             ---HHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEec
Confidence               12338899999985  467789999999999999999887 689999975

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.7e-50  Score=383.42  Aligned_cols=314  Identities=27%  Similarity=0.412  Sum_probs=271.4

Q ss_pred             CEEEEEcCCC-----------CCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhc----------------CCCCC
Q 019790            1 MKAIVITQPG-----------SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK----------------GSYPP   53 (335)
Q Consensus         1 mka~~~~~~~-----------~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~----------------g~~~~   53 (335)
                      |||+++..++           .++.+++++.+.|+|++|||+|||.++|||++|++...                |.+..
T Consensus        25 mkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~  104 (447)
T 4a0s_A           25 YLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT  104 (447)
T ss_dssp             EEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGG
T ss_pred             heeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCcccc
Confidence            8999999887           12459999999999999999999999999999985432                22222


Q ss_pred             CCCCC-CCCCCceEEEEEEecCCCCCCCCCCEEEEecC---------------------------CcceeeEEEecCCce
Q 019790           54 PKGAS-PYPGLECSGTILSVGKNVSRWKVGDQVCALLG---------------------------GGGYAEKVAVPAGQV  105 (335)
Q Consensus        54 ~~~~p-~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~---------------------------~g~~~~~~~~~~~~~  105 (335)
                      ...+| .++|||++|+|+++|+++++|++||+|++.+.                           +|+|+||++++++.+
T Consensus       105 ~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey~~v~~~~~  184 (447)
T 4a0s_A          105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQL  184 (447)
T ss_dssp             GGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSBSEEEEEGGGE
T ss_pred             ccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCceeeeeecCHHHc
Confidence            22456 69999999999999999999999999997531                           599999999999999


Q ss_pred             EeCCCCCChhhhccCcchHHHHHHHHHHh--cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          106 LPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       106 ~~~p~~~~~~~aa~~~~~~~~a~~~l~~~--~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      +++|+++++++||+++.+++|||+++...  .++++|++|||          +|++|++|++++|+|+..|++|++++++
T Consensus       185 ~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV----------~GasG~iG~~a~qla~~~Ga~vi~~~~~  254 (447)
T 4a0s_A          185 LPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLI----------WGASGGLGSYAIQFVKNGGGIPVAVVSS  254 (447)
T ss_dssp             EECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEE----------ECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            99999999999999999999999999643  88999999999          9988999999999999999999999999


Q ss_pred             hhhHHHHHHcCCCEEEeCCCcc------------------HHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEE
Q 019790          184 EEKLAVCKDLGADVCINYKTED------------------FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF  245 (335)
Q Consensus       184 ~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v  245 (335)
                      +++++.++++|++.++++.+.+                  +.+.+++.+ +.++|++|||+|+..+..++.+++++|+++
T Consensus       255 ~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv  333 (447)
T 4a0s_A          255 AQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKA-GREPDIVFEHTGRVTFGLSVIVARRGGTVV  333 (447)
T ss_dssp             HHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHH-SSCCSEEEECSCHHHHHHHHHHSCTTCEEE
T ss_pred             HHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHh-CCCceEEEECCCchHHHHHHHHHhcCCEEE
Confidence            9999999999999988865433                  257788888 678999999999988889999999999999


Q ss_pred             EEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 019790          246 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS  325 (335)
Q Consensus       246 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~  325 (335)
                      .+|...+....++...++.+++++.++......          .+..+++++++|+++++++++|+|+|+++|++.+.++
T Consensus       334 ~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~----------~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~  403 (447)
T 4a0s_A          334 TCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHE----------EQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTS  403 (447)
T ss_dssp             ESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHH----------HHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTT
T ss_pred             EEecCCCcccccCHHHHHhCCCEEEecCCCCHH----------HHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcC
Confidence            999776655567777888899999998765431          1223889999999999999999999999999999999


Q ss_pred             CCceeEEEeC
Q 019790          326 QHIGKIMLVP  335 (335)
Q Consensus       326 ~~~gkvvi~~  335 (335)
                      +..||+|+.+
T Consensus       404 ~~~GKvvv~~  413 (447)
T 4a0s_A          404 RQVGKVAVLC  413 (447)
T ss_dssp             CCSSEEEEES
T ss_pred             CCceEEEEEe
Confidence            9999998863

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.9e-49  Score=365.00  Aligned_cols=316  Identities=28%  Similarity=0.395  Sum_probs=273.3

Q ss_pred             CEEEEEcCCCCC--cceEE-EeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSP--EVLQL-QEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~--~~l~~-~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..++.+  +.+++ ++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+++|++++
T Consensus        24 MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V~  103 (362)
T 2c0c_A           24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSAS  103 (362)
T ss_dssp             EEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTGG
T ss_pred             ceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCcc
Confidence            899999998763  56899 999999999999999999999999999999997654445799999999999999999999


Q ss_pred             -CCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccc
Q 019790           78 -RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH  156 (335)
Q Consensus        78 -~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~  156 (335)
                       .|++||+|+++. +|+|+||++++++.++++|+. + .++++++.+++|||+++.+..++++|++|||          +
T Consensus       104 ~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV----------~  170 (362)
T 2c0c_A          104 ARYTVGQAVAYMA-PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLV----------T  170 (362)
T ss_dssp             GTCCTTCEEEEEC-SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEE----------T
T ss_pred             CCCCCCCEEEEcc-CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEE----------e
Confidence             999999999885 599999999999999999986 4 4567799999999999988889999999999          9


Q ss_pred             cccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhc
Q 019790          157 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLG  236 (335)
Q Consensus       157 g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~  236 (335)
                      |++|++|++++|+|+..|++|+++++++++++.++++|++.++|+++.++.+.+++.+ +.++|++|||+|+..+..+++
T Consensus       171 Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~-~~g~D~vid~~g~~~~~~~~~  249 (362)
T 2c0c_A          171 AAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEY-PEGVDVVYESVGGAMFDLAVD  249 (362)
T ss_dssp             TTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHC-TTCEEEEEECSCTHHHHHHHH
T ss_pred             CCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhc-CCCCCEEEECCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998888888887776 458999999999988889999


Q ss_pred             cccCCCEEEEEeccCCCcc-----cc---C-hhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccc
Q 019790          237 SLNIDGRLFIIGTQGGAKT-----EL---N-ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIY  307 (335)
Q Consensus       237 ~l~~~G~~v~~g~~~~~~~-----~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  307 (335)
                      +++++|+++.+|.......     .+   . ...++.+++++.+++...+...     ..+.++.+++++.+|++++.+.
T Consensus       250 ~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~~~l~~~g~l~~~~~  324 (362)
T 2c0c_A          250 ALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSK-----YQAAMSHLLEMCVSGDLVCEVD  324 (362)
T ss_dssp             HEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGG-----HHHHHHHHHHHHHTTCSCCCEE
T ss_pred             HHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhh-----HHHHHHHHHHHHHCCCeEeeec
Confidence            9999999999987653210     00   1 2456788999999876543211     2344666999999999988643


Q ss_pred             --------cccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          308 --------KYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       308 --------~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                              +.++|+++++|++.+++++..||+|+++
T Consensus       325 ~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          325 LGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             CSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cccccccccccCHHHHHHHHHHHHcCCCCceEEEEc
Confidence                    6689999999999999988889999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2e-48  Score=356.19  Aligned_cols=312  Identities=21%  Similarity=0.251  Sum_probs=273.4

Q ss_pred             CEEEEEcC--CC--CCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCc----eEEEEEEe
Q 019790            1 MKAIVITQ--PG--SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLE----CSGTILSV   72 (335)
Q Consensus         1 mka~~~~~--~~--~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e----~~G~V~~v   72 (335)
                      |||+++..  +|  .++.+++++.|.|+|++|||+|||.+++||++|++.+.+....  .+|.++|||    ++|+|++.
T Consensus         8 mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~--~~p~~~G~e~g~~~~G~V~~~   85 (336)
T 4b7c_A            8 NRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSY--IPPVGIGEVMRALGVGKVLVS   85 (336)
T ss_dssp             EEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCS--SCCCCTTSBCCCEEEEEEEEE
T ss_pred             ccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccccc--CCCCCCCcccCCceEEEEEec
Confidence            79999986  23  4678999999999999999999999999999999888764332  346777777    79999994


Q ss_pred             cCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhh--ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccc
Q 019790           73 GKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDA--AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSI  150 (335)
Q Consensus        73 G~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a--a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~  150 (335)
                        ++++|++||||++.   |+|+||++++++.++++|+++++.++  ++++++++|||+++.+..++++|++|||     
T Consensus        86 --~v~~~~vGdrV~~~---G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI-----  155 (336)
T 4b7c_A           86 --KHPGFQAGDYVNGA---LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVI-----  155 (336)
T ss_dssp             --CSTTCCTTCEEEEE---CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEE-----
T ss_pred             --CCCCCCCCCEEecc---CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEE-----
Confidence              58899999999986   89999999999999999999977776  7899999999999988899999999999     


Q ss_pred             cccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          151 SYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       151 ~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                           +|++|++|++++|+++..|++|+++++++++.+.+ +++|++.++|+.+.++.+.+.+.++ +++|++|||+|+.
T Consensus       156 -----~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~  229 (336)
T 4b7c_A          156 -----SGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECP-KGIDVFFDNVGGE  229 (336)
T ss_dssp             -----SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCT-TCEEEEEESSCHH
T ss_pred             -----ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcC-CCceEEEECCCcc
Confidence                 99889999999999999999999999999999999 8999999999999999999999884 5899999999998


Q ss_pred             hHHHhhccccCCCEEEEEeccCCC------ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc
Q 019790          230 YFQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  303 (335)
Q Consensus       230 ~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  303 (335)
                      .+..++++++++|+++.+|.....      ...++...++.+++++.++........     ..+.++.+++++.+|+++
T Consensus       230 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~-----~~~~~~~~~~l~~~g~l~  304 (336)
T 4b7c_A          230 ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQR-----FPEGLKEMATWLAEGKLQ  304 (336)
T ss_dssp             HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGG-----HHHHHHHHHHHHHTTSSC
T ss_pred             hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhh-----hHHHHHHHHHHHHCCCcc
Confidence            889999999999999999876521      134566778889999999887654321     234566699999999999


Q ss_pred             cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          304 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       304 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+..+++++++++|++.+.+++..||+|+++
T Consensus       305 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          305 SREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            98877899999999999999999999999974

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=3.3e-49  Score=363.96  Aligned_cols=305  Identities=23%  Similarity=0.304  Sum_probs=264.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCC-C-CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |||+++..++   .+++++.+.|+|.++||+|||.++|||++|++.+.|.. . ....+|.++|||++|+|+++|+++++
T Consensus         8 mka~~~~~~~---~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            8 NLSLVVHGPG---DLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             ceEEEEecCC---cEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            8999999765   49999999999999999999999999999999887432 1 11246899999999999999999999


Q ss_pred             CCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~  130 (335)
                      |++||||++..                            .+|+|+||++++++.++++|+++++++|+.+ .+++|||++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~a  163 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHA  163 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHH
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHH
Confidence            99999998741                            3699999999999999999999999999854 688999999


Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCC---CccH
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK---TEDF  206 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~  206 (335)
                      + +..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.++++|++.+++++   ..++
T Consensus       164 l-~~~~~~~g~~VlV----------~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  231 (356)
T 1pl8_A          164 C-RRGGVTLGHKVLV----------CG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEI  231 (356)
T ss_dssp             H-HHHTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHH
T ss_pred             H-HhcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchH
Confidence            9 7789999999999          98 59999999999999999 999999999999999999999999987   3667


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHH
Q 019790          207 VARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI  285 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (335)
                      .+.+++.++ .++|++|||+|+. .+..++++|+++|+++.+|... ....++...++.+++++.++.....        
T Consensus       232 ~~~i~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~~~~~~i~g~~~~~~--------  301 (356)
T 1pl8_A          232 ARKVEGQLG-CKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGS-EMTTVPLLHAAIREVDIKGVFRYCN--------  301 (356)
T ss_dssp             HHHHHHHHT-SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCC-SCCCCCHHHHHHTTCEEEECCSCSS--------
T ss_pred             HHHHHHHhC-CCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCC-CCCccCHHHHHhcceEEEEecccHH--------
Confidence            778888887 6899999999986 5788999999999999998643 3346777788899999998765411        


Q ss_pred             HHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          286 VSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       286 ~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                         .++.+++++++|++  +++++++|+|+++++|++.++++ ..||+|+++
T Consensus       302 ---~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          302 ---TWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             ---CHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             ---HHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeC
Confidence               12338899999986  46778999999999999999988 778999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=4.5e-50  Score=368.17  Aligned_cols=304  Identities=23%  Similarity=0.338  Sum_probs=246.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC-CCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-PKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||+++..++.+  +++++.+.|+|+++||+|||.+++||++|++.+.|.++. ...+|.++|||++|+|+++|++ ++|
T Consensus         4 mka~~~~~~g~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            4 SKAALLKKFSEP--LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEBCEECSCCC-------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             eEEEEEecCCCC--CeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            899999988744  889999999999999999999999999999999987642 2356899999999999999999 999


Q ss_pred             CCCCEEEEec---------------------------CCcceeeEEEec-CCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           80 KVGDQVCALL---------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      ++||+|++..                           .+|+|+||++++ ++.++++ +++++++||+++++++|||+++
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al  159 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAI  159 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHH
Confidence            9999998752                           369999999999 9999999 9999999999999999999999


Q ss_pred             HHh----cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEEEeCCC-c
Q 019790          132 FMT----SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKT-E  204 (335)
Q Consensus       132 ~~~----~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~  204 (335)
                      .+.    .++ +|++|||          +|+ |++|++++|+|+.+  |++|+++++++++++.++++|++.++|+++ .
T Consensus       160 ~~~~~~~~~~-~g~~VlV----------~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~  227 (344)
T 2h6e_A          160 RQALPFISKF-AEPVVIV----------NGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAE  227 (344)
T ss_dssp             HHHHHHHTTC-SSCEEEE----------ECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHH
T ss_pred             HhhhhcccCC-CCCEEEE----------ECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccch
Confidence            665    388 9999999          997 99999999999999  999999999999999999999999988654 3


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHH
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKA  283 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (335)
                      ++   +.+.+.+.++|++|||+|+. .+..++++++++|+++.+|..... ..++...++.+++++.++.....      
T Consensus       228 ~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~------  297 (344)
T 2h6e_A          228 SL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR-VSLEAFDTAVWNKKLLGSNYGSL------  297 (344)
T ss_dssp             HH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC-CCCCHHHHHHTTCEEEECCSCCH------
T ss_pred             HH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC-cccCHHHHhhCCcEEEEEecCCH------
Confidence            33   34555566899999999987 688899999999999999876543 46777778889999998765421      


Q ss_pred             HHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          284 LIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       284 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                          +.++.+++++.+|++++.+ ++|+|+|+++|++.+++++..||+|++|
T Consensus       298 ----~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          298 ----NDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             ----HHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred             ----HHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence                2244589999999999988 9999999999999999888889999975

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.9e-50  Score=371.60  Aligned_cols=303  Identities=23%  Similarity=0.304  Sum_probs=264.1

Q ss_pred             CEEEEEcCCCCCcceEEEe--ecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC-
Q 019790            1 MKAIVITQPGSPEVLQLQE--VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~--~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-   77 (335)
                      |||+++..++.+  +++++  .|.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|++++ 
T Consensus         7 mka~~~~~~~~~--l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~p~v~GhE~~G~V~~vG~~v~~   83 (360)
T 1piw_A            7 FEGIAIQSHEDW--KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLGPKSNS   83 (360)
T ss_dssp             EEEEEECCSSST--TSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEECTTCCS
T ss_pred             eEEEEEecCCCC--eeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCC-CCCCcccCcCceEEEEEeCCCCCC
Confidence            899999988754  77888  9999999999999999999999999999987543 34689999999999999999999 


Q ss_pred             CCCCCCEEEEe-----------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcc
Q 019790           78 RWKVGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (335)
Q Consensus        78 ~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~  122 (335)
                      +|++||+|+..                                   ..+|+|+||++++++.++++|+++++++||++++
T Consensus        84 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  163 (360)
T 1piw_A           84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLC  163 (360)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGT
T ss_pred             CCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhhh
Confidence            99999999421                                   2358999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC
Q 019790          123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK  202 (335)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~  202 (335)
                      +++|||+++.+ .++++|++|||          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++|+.
T Consensus       164 ~~~ta~~~l~~-~~~~~g~~VlV----------~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~  231 (360)
T 1piw_A          164 GGLTVYSPLVR-NGCGPGKKVGI----------VGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL  231 (360)
T ss_dssp             HHHHHHHHHHH-TTCSTTCEEEE----------ECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             hHHHHHHHHHH-cCCCCCCEEEE----------ECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCc
Confidence            99999999965 89999999999          997 9999999999999999999999999999999999999999987


Q ss_pred             Cc-cHHHHHHHHhCCCcccEEEeCCCh---hhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccc
Q 019790          203 TE-DFVARVKEETGGKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  278 (335)
Q Consensus       203 ~~-~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (335)
                      +. ++.+.+.     .++|++|||+|.   ..+..++++|+++|+++.+|.... ...++...++.+++++.++..... 
T Consensus       232 ~~~~~~~~~~-----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~-  304 (360)
T 1piw_A          232 EEGDWGEKYF-----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSI-  304 (360)
T ss_dssp             GTSCHHHHSC-----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCH-
T ss_pred             CchHHHHHhh-----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCH-
Confidence            66 6654433     379999999998   567889999999999999987654 214556667889999998765431 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHCCccccccccccchhh--HHHHHHHHHhCCCceeEEEeC
Q 019790          279 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE--AAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvi~~  335 (335)
                               +.++.+++++.+|++++.+ ++|+|++  +++|++.+++++..||+|+++
T Consensus       305 ---------~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          305 ---------KELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             ---------HHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             ---------HHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEec
Confidence                     1234488999999999888 9999999  999999999988889999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=2e-49  Score=366.42  Aligned_cols=305  Identities=19%  Similarity=0.269  Sum_probs=263.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCC--------CCCCCcEEEEEEEeecCcchhhhhcCCC--CCCCCCCCCCCCceEEEEE
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDP--------QIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTIL   70 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~--------~~~~~eVlI~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~   70 (335)
                      |||+++..++.   +++++.|.|        +|+++||+|||.+++||++|++.+.+..  .....+|.++|||++|+|+
T Consensus         9 mka~~~~~~~~---l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~   85 (363)
T 3m6i_A            9 NIGVFTNPQHD---LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVI   85 (363)
T ss_dssp             CEEEEECTTCC---EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEE
T ss_pred             ceeEEEeCCCc---EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEE
Confidence            89999997654   999999999        9999999999999999999999887432  1223568999999999999


Q ss_pred             EecCCCCCCCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcc
Q 019790           71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE  122 (335)
Q Consensus        71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~  122 (335)
                      ++|+++++|++||+|++..                            .+|+|+||++++.+.++++|+ +++++||++ .
T Consensus        86 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~  163 (363)
T 3m6i_A           86 AVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-E  163 (363)
T ss_dssp             EECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-H
T ss_pred             EECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh-h
Confidence            9999999999999998741                            469999999999999999999 999999977 5


Q ss_pred             hHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeC
Q 019790          123 VACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINY  201 (335)
Q Consensus       123 ~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~  201 (335)
                      +++|||+++ +..++++|++|||          +|+ |++|++++|+|+.+|++ |+++++++++++.++++ ++.++++
T Consensus       164 ~~~ta~~~l-~~~~~~~g~~VlV----------~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~  230 (363)
T 3m6i_A          164 PLSVALAGL-QRAGVRLGDPVLI----------CGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTH  230 (363)
T ss_dssp             HHHHHHHHH-HHHTCCTTCCEEE----------ECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEE
T ss_pred             HHHHHHHHH-HHcCCCCCCEEEE----------ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccc
Confidence            888999999 7889999999999          986 99999999999999997 99999999999999999 6544443


Q ss_pred             C-----CccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeecc
Q 019790          202 K-----TEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLR  275 (335)
Q Consensus       202 ~-----~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (335)
                      .     ..++.+.+++.+++.++|++|||+|+. .+..++++|+++|+++.+|..... ..++...++.+++++.++...
T Consensus       231 ~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          231 KVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE-IQIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             ECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC-CCCCHHHHHHHTCEEEECCSC
T ss_pred             cccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC-ccccHHHHHhcCcEEEEccCC
Confidence            2     356788899999888999999999997 578999999999999999876543 457777888999999998754


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhC-CCceeEEEeC
Q 019790          276 SRSTENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESS-QHIGKIMLVP  335 (335)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~~  335 (335)
                       .  .        .++.+++++.+|++  +++++++|+|+++++|++.+.++ ...+|+|++.
T Consensus       310 -~--~--------~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          310 -C--N--------TWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             -S--S--------CHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             -H--H--------HHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEec
Confidence             1  1        12338899999997  56778999999999999999987 5778999863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.6e-50  Score=363.70  Aligned_cols=315  Identities=19%  Similarity=0.290  Sum_probs=262.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+..+++++.|.|+|+++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++  ++++|+
T Consensus         4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~   81 (328)
T 1xa0_A            4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFR   81 (328)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCC
T ss_pred             ceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCC
Confidence            899999988866679999999999999999999999999999999998865544457899999999999995  567899


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH--HhcCCCCCC-EEEEeecccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVDFCSIS  151 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~--~~~~~~~~~-~vli~~~~~~  151 (335)
                      +||+|++..      .+|+|+||++++++.++++|+++++++||++++++.|||.++.  ...++++|+ +|||      
T Consensus        82 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV------  155 (328)
T 1xa0_A           82 EGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLV------  155 (328)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE------
T ss_pred             CCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEE------
Confidence            999999763      4699999999999999999999999999999999999998875  346788987 9999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                          +|++|++|++++|+|+.+|++|+++++++++++.++++|++.++|+++.+ .+.+++.+ +.++|++|||+|+..+
T Consensus       156 ----~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~~~~~~~-~~~~d~vid~~g~~~~  229 (328)
T 1xa0_A          156 ----TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVM-AERIRPLD-KQRWAAAVDPVGGRTL  229 (328)
T ss_dssp             ----SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC----------CC-SCCEEEEEECSTTTTH
T ss_pred             ----ecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcH-HHHHHHhc-CCcccEEEECCcHHHH
Confidence                99889999999999999999999999999999999999999999887543 23334443 3489999999999888


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|...+...+++...++.+++++.++.........    ..+.++.+.+++.+| +++. .++|+
T Consensus       230 ~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----~~~~~~~~~~~~~~g-l~~~-~~~~~  303 (328)
T 1xa0_A          230 ATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDL----RLRIWERLAGDLKPD-LERI-AQEIS  303 (328)
T ss_dssp             HHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHH----HHHHHHHHHTTTCCC-HHHH-EEEEE
T ss_pred             HHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHH----HHHHHHHHHHHHHcC-Ccee-eeEeC
Confidence            99999999999999998765444456666778899999987543222111    233455577777778 7764 68999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      |+++++|++.+++++..||+|+++
T Consensus       304 l~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          304 LAELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             GGGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEEe
Confidence            999999999999988889999875

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=1e-50  Score=370.39  Aligned_cols=317  Identities=21%  Similarity=0.315  Sum_probs=267.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++.+..+++++.|.|+|+++||+|||.++|||++|++.+.|..+....+|.++|||++|+|+++  ++++|+
T Consensus         5 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~~   82 (330)
T 1tt7_A            5 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRFA   82 (330)
T ss_dssp             EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTCC
T ss_pred             ceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCCC
Confidence            899999998766679999999999999999999999999999999999876554567999999999999996  467899


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH--HhcCCCCCC-EEEEeecccc
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLSPGE-SFLVDFCSIS  151 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~--~~~~~~~~~-~vli~~~~~~  151 (335)
                      +||+|++..      .+|+|+||++++++.++++|+++++++||+++++++|||.++.  ...++++|+ +|||      
T Consensus        83 vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV------  156 (330)
T 1tt7_A           83 EGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLV------  156 (330)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE------
T ss_pred             CCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEE------
Confidence            999999763      4699999999999999999999999999999999999998875  346788987 9999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                          +|++|++|++++|+|+.+|++|+++++++++++.++++|++.++|+++.+ .+.+++.+ +.++|++|||+|+..+
T Consensus       157 ----~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~-~~~~d~vid~~g~~~~  230 (330)
T 1tt7_A          157 ----TGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKALS-KQQWQGAVDPVGGKQL  230 (330)
T ss_dssp             ----ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSSC-CCCEEEEEESCCTHHH
T ss_pred             ----ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHhh-cCCccEEEECCcHHHH
Confidence                99889999999999999999999999999999999999999998764321 11122223 3479999999999888


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|...+...+++...++.+++++.+++........    ..+.++.+.+++.+|+++++++++|+
T Consensus       231 ~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~i~~~~~  306 (330)
T 1tt7_A          231 ASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDV----RAAVWERMSSDLKPDQLLTIVDREVS  306 (330)
T ss_dssp             HHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHH----HHHHHHHTTTTSCCSCSTTSEEEEEC
T ss_pred             HHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHH----HHHHHHHHHHHHhcCCcccccceEEc
Confidence            99999999999999999766544456666778899999998543222111    23345557788888999998899999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      |+++++|++.+.+++..||+|+++
T Consensus       307 l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          307 LEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             STTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEeC
Confidence            999999999999888889999875

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.1e-49  Score=364.68  Aligned_cols=304  Identities=21%  Similarity=0.274  Sum_probs=258.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++...++  +.+++++.|.|+|+++||+|||.+++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus        23 ~~a~~~~~~~--~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~   99 (369)
T 1uuf_A           23 IKAVGAYSAK--QPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQVEKYA   99 (369)
T ss_dssp             CEEEEBSSTT--SCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEcCCC--CCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCC-CCCCeecccCceEEEEEECCCCCCCC
Confidence            7888876554  34999999999999999999999999999999999987543 34689999999999999999999999


Q ss_pred             CCCEEEEe------------------------------------cCCcceeeEEEecCCceEeCCCC-CChhhhccCcch
Q 019790           81 VGDQVCAL------------------------------------LGGGGYAEKVAVPAGQVLPVPSG-VSLKDAAAFPEV  123 (335)
Q Consensus        81 ~Gd~V~~~------------------------------------~~~g~~~~~~~~~~~~~~~~p~~-~~~~~aa~~~~~  123 (335)
                      +||+|++.                                    ..+|+|+||++++.+.++++|++ +++++||+++++
T Consensus       100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~  179 (369)
T 1uuf_A          100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA  179 (369)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred             CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence            99999852                                    13489999999999999999999 999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC
Q 019790          124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT  203 (335)
Q Consensus       124 ~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~  203 (335)
                      ++|||+++.+ .++++|++|||          +|+ |++|++++|+|+.+|++|+++++++++++.++++|++.++|+.+
T Consensus       180 ~~tA~~al~~-~~~~~g~~VlV----------~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~  247 (369)
T 1uuf_A          180 GITTYSPLRH-WQAGPGKKVGV----------VGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRN  247 (369)
T ss_dssp             HHHHHHHHHH-TTCCTTCEEEE----------ECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             HHHHHHHHHh-cCCCCCCEEEE----------ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEecccc
Confidence            9999999965 58999999999          985 99999999999999999999999999999999999999999877


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK  282 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
                      .++.+   +..  .++|++|||+|.. .+..+++.|+++|+++.+|........++...++.+++++.++.....     
T Consensus       248 ~~~~~---~~~--~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----  317 (369)
T 1uuf_A          248 ADEMA---AHL--KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGI-----  317 (369)
T ss_dssp             HHHHH---TTT--TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCH-----
T ss_pred             HHHHH---Hhh--cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCH-----
Confidence            54433   222  4799999999986 588899999999999999876543225667778889999999865431     


Q ss_pred             HHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          283 ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       283 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           +.++.+++++.+|++++.+ +.|+|+++++|++.+.+++..||+|+++
T Consensus       318 -----~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          318 -----PETQEMLDFCAEHGIVADI-EMIRADQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             -----HHHHHHHHHHHHHTCCCCE-EEECGGGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             -----HHHHHHHHHHHhCCCCcce-EEEcHHHHHHHHHHHHcCCCceEEEEec
Confidence                 1234488999999998876 5799999999999999988889999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=1.9e-48  Score=361.36  Aligned_cols=312  Identities=28%  Similarity=0.362  Sum_probs=261.2

Q ss_pred             CEEEEEcCCCCCcceEE-EeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCC--------------CCCCCCCCCCCc
Q 019790            1 MKAIVITQPGSPEVLQL-QEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYP--------------PPKGASPYPGLE   64 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~-~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~--------------~~~~~p~~~G~e   64 (335)
                      |||+++..++.+..+++ ++.+.|.+ .++||+|||.++|||++|++.+.|..+              ....+|.++|||
T Consensus        22 mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E  101 (375)
T 2vn8_A           22 SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRD  101 (375)
T ss_dssp             EEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCCE
T ss_pred             ceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCccccee
Confidence            79999999988888999 99999985 999999999999999999999988532              112378999999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEEecC---CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcC----C
Q 019790           65 CSGTILSVGKNVSRWKVGDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH----L  137 (335)
Q Consensus        65 ~~G~V~~vG~~~~~~~~Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~----~  137 (335)
                      ++|+|+++|+++++|++||+|++...   +|+|+||++++++.++++|+++++++||+++++++|||+++.+.++    +
T Consensus       102 ~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~  181 (375)
T 2vn8_A          102 VSGVVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKN  181 (375)
T ss_dssp             EEEEEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTT
T ss_pred             eeEEEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhccccccc
Confidence            99999999999999999999998753   6999999999999999999999999999999999999999977788    8


Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      ++|++|||          +|++|++|++++|+|+.+|++|++++ ++++++.++++|++.++|+++.++.+.+.+.   .
T Consensus       182 ~~g~~VlV----------~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~---~  247 (375)
T 2vn8_A          182 CTGKRVLI----------LGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSL---K  247 (375)
T ss_dssp             CTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTS---C
T ss_pred             CCCCEEEE----------ECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhc---C
Confidence            99999999          99999999999999999999999988 6788999999999999999888877776653   4


Q ss_pred             cccEEEeCCChhh--HHHhhccccCCCEEEEEeccCCCcc-c--cCh------hHHhh-------cceEEEEeeccccch
Q 019790          218 GVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKT-E--LNI------TSLFA-------KRLTVQAAGLRSRST  279 (335)
Q Consensus       218 ~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~-~--~~~------~~~~~-------~~~~~~~~~~~~~~~  279 (335)
                      ++|++|||+|+..  +..++++++++|+++.+|....... .  +..      ..++.       ++..+.+.....  .
T Consensus       248 g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~  325 (375)
T 2vn8_A          248 PFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMA--S  325 (375)
T ss_dssp             CBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCC--C
T ss_pred             CCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeCC--C
Confidence            7999999999873  4788999999999999986432110 0  100      11222       333333322111  0


Q ss_pred             hhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          280 ENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                             .+.++.+++++.+|+++++++++|+|+|+++|++.+++++..||+|+++
T Consensus       326 -------~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          326 -------GPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             -------HHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             -------HHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence                   1234558999999999999999999999999999999988889999875

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.1e-48  Score=360.53  Aligned_cols=305  Identities=21%  Similarity=0.288  Sum_probs=259.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||+..+...+.++.+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         8 m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   86 (357)
T 2cf5_A            8 RKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM-SNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_dssp             CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC-CCSSBCCCCEEEEEEEEECSSCCSCC
T ss_pred             ceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC-CCCCeecCcceeEEEEEECCCCCCCC
Confidence            55555555555667999999999999999999999999999999999887643 35689999999999999999999999


Q ss_pred             CCCEEEEe-----------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790           81 VGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +||+|+..                                   ..+|+|+||++++++.++++|+++++++||+++++++
T Consensus        87 vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  166 (357)
T 2cf5_A           87 VGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGV  166 (357)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHH
T ss_pred             CCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHH
Confidence            99999742                                   1469999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCC-CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCC
Q 019790          126 TVWSTVFMTSHLS-PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT  203 (335)
Q Consensus       126 ~a~~~l~~~~~~~-~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~  203 (335)
                      |||+++. ..+++ +|++|||          +| +|++|++++|+|+.+|++|+++++++++++.++ ++|++.++++.+
T Consensus       167 ta~~~l~-~~~~~~~g~~VlV----------~G-aG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~  234 (357)
T 2cf5_A          167 TVYSPLS-HFGLKQPGLRGGI----------LG-LGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSD  234 (357)
T ss_dssp             HHHHHHH-HTSTTSTTCEEEE----------EC-CSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTC
T ss_pred             HHHHHHH-hcCCCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeecccc
Confidence            9999995 46788 9999999          98 699999999999999999999999999999888 899999998876


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK  282 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
                      .   +.+++.++  ++|++|||+|.. .+..++++++++|+++.+|........++.. ++.+++++.+++....     
T Consensus       235 ~---~~~~~~~~--g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~-----  303 (357)
T 2cf5_A          235 Q---AKMSELAD--SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSM-----  303 (357)
T ss_dssp             H---HHHHHSTT--TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCH-----
T ss_pred             H---HHHHHhcC--CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCH-----
Confidence            3   34555543  799999999975 5788999999999999998765432225555 7889999999866431     


Q ss_pred             HHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          283 ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       283 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           +.++.+++++.+|++++.+ ++|+++++++|++.+++++..||+|+++
T Consensus       304 -----~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          304 -----KETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             -----HHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEET
T ss_pred             -----HHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeC
Confidence                 1234488999999998876 7999999999999999988889999875

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=4e-49  Score=368.64  Aligned_cols=306  Identities=19%  Similarity=0.290  Sum_probs=265.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-CC-----CcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-KD-----DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK   74 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-~~-----~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~   74 (335)
                      |||+++..++   .+++++.+.|+| .+     +||+|||.++|||++|++.+.|..+  ..+|.++|||++|+|+++|+
T Consensus         3 MkA~~~~~~~---~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~--~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            3 NKSVVYHGTR---DLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI--VPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             EEEEEEEETT---EEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC--CCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEEcCC---CEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC--CCCCcccCCceEEEEEEECC
Confidence            8999999765   489999999987 68     9999999999999999999998643  34689999999999999999


Q ss_pred             CCCCCCCCCEEEEec--------------------------------------CCcceeeEEEecCC--ceEeCCCCCCh
Q 019790           75 NVSRWKVGDQVCALL--------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL  114 (335)
Q Consensus        75 ~~~~~~~Gd~V~~~~--------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (335)
                      ++++|++||+|++..                                      .+|+|+||++++.+  .++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            999999999998631                                      25899999999987  89999999999


Q ss_pred             hh----hccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHH
Q 019790          115 KD----AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV  189 (335)
Q Consensus       115 ~~----aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~  189 (335)
                      ++    +|+++.+++|||+++ +..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV----------~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYI----------AG-AGPVGRCAAAGARLLGAACVIVGDQNPERLKL  225 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEE----------EC-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             hhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEE----------EC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            98    888999999999999 6789999999999          98 59999999999999999 99999999999999


Q ss_pred             HHHcCCCEEEeCCCccH-HHHHHHHhCCCcccEEEeCCChh---------------hHHHhhccccCCCEEEEEeccC--
Q 019790          190 CKDLGADVCINYKTEDF-VARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQG--  251 (335)
Q Consensus       190 ~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~--  251 (335)
                      ++++|++ ++|+.+.++ .+.+++.+++.++|++|||+|+.               .+..++++|+++|+++.+|...  
T Consensus       226 a~~lGa~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~  304 (398)
T 2dph_A          226 LSDAGFE-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGS  304 (398)
T ss_dssp             HHTTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSC
T ss_pred             HHHcCCc-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccc
Confidence            9999995 788887776 88899999887899999999975               4788999999999999998762  


Q ss_pred             ----------CCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--c--ccccccchhhHHH
Q 019790          252 ----------GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--P--VIYKYLPLCEAAE  317 (335)
Q Consensus       252 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~l~~~~~  317 (335)
                                .....++...++.+++++.++.....          +.++.+++++.+|+++  +  +++++|+|+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~  374 (398)
T 2dph_A          305 DPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVT----------NYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPD  374 (398)
T ss_dssp             CSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCGG----------GTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHH
T ss_pred             ccccccccccCCcccccHHHHhhcCCEEEEeccCcH----------HHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHH
Confidence                      11234566677889999987654321          1133488999999998  6  6789999999999


Q ss_pred             HHHHHHhCCCceeEEEeC
Q 019790          318 AHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       318 a~~~~~~~~~~gkvvi~~  335 (335)
                      |++.+.+++. ||+|+++
T Consensus       375 A~~~~~~~~~-gKvvv~~  391 (398)
T 2dph_A          375 GYAKFDKGSP-AKFVIDP  391 (398)
T ss_dssp             HHHHHHTTCS-CEEEECT
T ss_pred             HHHHHhcCCc-eEEEEec
Confidence            9999998887 9999975

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=4.6e-49  Score=368.84  Aligned_cols=308  Identities=24%  Similarity=0.367  Sum_probs=266.9

Q ss_pred             CEEEEEcCCCCCc-------------------------ceEEEeecCCC-CCCCcEEEEEEEeecCcchhhhhcCCC---
Q 019790            1 MKAIVITQPGSPE-------------------------VLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSY---   51 (335)
Q Consensus         1 mka~~~~~~~~~~-------------------------~l~~~~~~~~~-~~~~eVlI~v~~~~i~~~D~~~~~g~~---   51 (335)
                      |||++++..++|.                         .+++++.|.|+ |+++||+|||.+++||++|++.+.|..   
T Consensus         3 m~a~~~~~~~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~   82 (404)
T 3ip1_A            3 LRAVRLHAKWDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGY   82 (404)
T ss_dssp             EEEEEEEEEECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSB
T ss_pred             ceEEEecCCCCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCcc
Confidence            7999998877776                         78999999999 999999999999999999999988642   


Q ss_pred             ---CCCCCCCCCCCCceEEEEEEecCCC------CCCCCCCEEEEe---------------------------cCCccee
Q 019790           52 ---PPPKGASPYPGLECSGTILSVGKNV------SRWKVGDQVCAL---------------------------LGGGGYA   95 (335)
Q Consensus        52 ---~~~~~~p~~~G~e~~G~V~~vG~~~------~~~~~Gd~V~~~---------------------------~~~g~~~   95 (335)
                         +....+|.++|||++|+|+++|+++      ++|++||+|++.                           ..+|+|+
T Consensus        83 ~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~a  162 (404)
T 3ip1_A           83 ILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFA  162 (404)
T ss_dssp             BSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSB
T ss_pred             ccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCc
Confidence               2223578999999999999999999      889999999973                           2469999


Q ss_pred             eEEEecCCceEeCCCCCC------hhhhccCcchHHHHHHHHHHh-cCCCCCCEEEEeeccccccccccccchHHHHHHH
Q 019790           96 EKVAVPAGQVLPVPSGVS------LKDAAAFPEVACTVWSTVFMT-SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQ  168 (335)
Q Consensus        96 ~~~~~~~~~~~~~p~~~~------~~~aa~~~~~~~~a~~~l~~~-~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~  168 (335)
                      ||++++.+.++++|++++      +.++|+++.+++|||+++... .++++|++|||          +|+ |++|++++|
T Consensus       163 ey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV----------~Ga-G~vG~~aiq  231 (404)
T 3ip1_A          163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVI----------LGG-GPIGLAAVA  231 (404)
T ss_dssp             SEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEE----------ECC-SHHHHHHHH
T ss_pred             ceEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEE----------ECC-CHHHHHHHH
Confidence            999999999999999875      456888999999999999655 48999999999          985 999999999


Q ss_pred             HHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh--hHHHhhccc----cCC
Q 019790          169 MGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSL----NID  241 (335)
Q Consensus       169 ~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l----~~~  241 (335)
                      +|+.+|+ +|+++++++++++.++++|++.++|+++.++.+.+++.+++.++|++|||+|+.  .+..+++.|    +++
T Consensus       232 lak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~  311 (404)
T 3ip1_A          232 ILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN  311 (404)
T ss_dssp             HHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC
Confidence            9999999 899999999999999999999999999999999999999998999999999987  455666666    999


Q ss_pred             CEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHH
Q 019790          242 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAH  319 (335)
Q Consensus       242 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~  319 (335)
                      |+++.+|..... ..++...++.+++++.++...... .        .++.+++++.+| ++  ++++++|+|+++++|+
T Consensus       312 G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~-~--------~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~  380 (404)
T 3ip1_A          312 ATVAIVARADAK-IPLTGEVFQVRRAQIVGSQGHSGH-G--------TFPRVISLMASG-MDMTKIISKTVSMEEIPEYI  380 (404)
T ss_dssp             CEEEECSCCCSC-EEECHHHHHHTTCEEEECCCCCST-T--------HHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHH
T ss_pred             cEEEEeCCCCCC-CcccHHHHhccceEEEEecCCCch-H--------HHHHHHHHHHcC-CChhheEEEEeeHHHHHHHH
Confidence            999999977654 477888889999999998754321 1        123488999999 64  5678999999999999


Q ss_pred             HHHHhCCCceeEEEe
Q 019790          320 QLMESSQHIGKIMLV  334 (335)
Q Consensus       320 ~~~~~~~~~gkvvi~  334 (335)
                      +.+.    .||+|++
T Consensus       381 ~~~~----~GKvvl~  391 (404)
T 3ip1_A          381 KRLQ----TDKSLVK  391 (404)
T ss_dssp             HHTT----TCTTCSC
T ss_pred             HHHh----CCcEEEe
Confidence            9987    4677765

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=4.3e-49  Score=355.32  Aligned_cols=298  Identities=32%  Similarity=0.494  Sum_probs=255.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++..  +++.|.|+|+++||+|||.++|||++|++.+.|.++....+|.++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~--l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLE--LVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEE--EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchh--eEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence            99999999988743  458899999999999999999999999999999766544679999999999998          


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                       ||+|+++..+|+|+||++++++.++++|++++++++|+++++++|||+++.+.. +++|++|||          +|++|
T Consensus        69 -GdrV~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV----------~Ga~G  136 (302)
T 1iz0_A           69 -GRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLV----------QAAAG  136 (302)
T ss_dssp             -TEEEEEECSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEE----------SSTTB
T ss_pred             -CcEEEEecCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEE----------ECCCc
Confidence             999999988899999999999999999999999999999999999999997677 999999999          99889


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcccc
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN  239 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~  239 (335)
                      ++|++++|+|+.+|++|+++++++++++.++++|++.++|+++ .++.+.+      +++|++|| +|+..+..++++++
T Consensus       137 ~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~------~~~d~vid-~g~~~~~~~~~~l~  209 (302)
T 1iz0_A          137 ALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW------GGLDLVLE-VRGKEVEESLGLLA  209 (302)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT------TSEEEEEE-CSCTTHHHHHTTEE
T ss_pred             HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh------cCceEEEE-CCHHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999998765 5544433      47999999 99988899999999


Q ss_pred             CCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHH---HHHCCccccccccccchhhHH
Q 019790          240 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP---AIAVGKVKPVIYKYLPLCEAA  316 (335)
Q Consensus       240 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~l~~~~  316 (335)
                      ++|+++.+|........++...++.+++++.++.+....  .    ..+.++.+++   ++.+|++++.++++|++++++
T Consensus       210 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~----~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~  283 (302)
T 1iz0_A          210 HGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLL--R----EGALVEEALGFLLPRLGRELRPVVGPVFPFAEAE  283 (302)
T ss_dssp             EEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHT--T----CHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGGHH
T ss_pred             cCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchh--h----hHHHHHHHHhhhHHHHcCCcccccceEEcHHHHH
Confidence            999999998766543356666778899999998764321  0    1223444777   999999999999999999999


Q ss_pred             HHHHHHHhCCCceeEEEeC
Q 019790          317 EAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       317 ~a~~~~~~~~~~gkvvi~~  335 (335)
                      +|++.+.+++..||+|+++
T Consensus       284 ~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          284 AAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             HHHHHTTCTTCCBEEEEEC
T ss_pred             HHHHHHHcCCCCceEEEeC
Confidence            9999999888889999875

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.3e-47  Score=353.49  Aligned_cols=314  Identities=20%  Similarity=0.255  Sum_probs=270.5

Q ss_pred             CEEEEE-cCC---CCC--cceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcC----CCCCCCCCCCCCCCceEEEE
Q 019790            1 MKAIVI-TQP---GSP--EVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKG----SYPPPKGASPYPGLECSGTI   69 (335)
Q Consensus         1 mka~~~-~~~---~~~--~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g----~~~~~~~~p~~~G~e~~G~V   69 (335)
                      |||+++ ..+   |.|  ..+++++.+.|.| ++|||+|||.++|||++|++.+.+    .++.+..+|.++|||++|+|
T Consensus         9 mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~V   88 (357)
T 2zb4_A            9 VQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGII   88 (357)
T ss_dssp             EEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEEE
T ss_pred             ceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEEE
Confidence            899999 565   555  7899999999999 999999999999999999988775    23223356889999999999


Q ss_pred             EEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCC-----ChhhhccCcchHHHHHHHHHHhcCCCCC--CE
Q 019790           70 LSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGV-----SLKDAAAFPEVACTVWSTVFMTSHLSPG--ES  142 (335)
Q Consensus        70 ~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~-----~~~~aa~~~~~~~~a~~~l~~~~~~~~~--~~  142 (335)
                      ++  +++++|++||+|++..  |+|+||++++.+.++++|+++     +++ +++++.+++|||+++.+..++++|  ++
T Consensus        89 ~~--~~v~~~~vGdrV~~~~--G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~  163 (357)
T 2zb4_A           89 EE--SKHTNLTKGDFVTSFY--WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKT  163 (357)
T ss_dssp             EE--ECSTTCCTTCEEEEEE--EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCE
T ss_pred             Ee--cCCCCCCCCCEEEecC--CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccE
Confidence            99  8889999999999874  899999999999999999998     555 677999999999999888999999  99


Q ss_pred             EEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          143 FLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       143 vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      +||          +|++|++|++++|+++..|+ +|+++++++++.+.+++ +|++.++|+.+.++.+.+.+.+.+ ++|
T Consensus       164 vlI----------~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~d  232 (357)
T 2zb4_A          164 MVV----------SGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPA-GVD  232 (357)
T ss_dssp             EEE----------SSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT-CEE
T ss_pred             EEE----------ECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCC-CCC
Confidence            999          99899999999999999999 99999999999998886 999999999888888888888876 899


Q ss_pred             EEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccC---------hhHHhhcceEEEEeeccccchhhHHHHHHHHHH
Q 019790          221 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELN---------ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK  291 (335)
Q Consensus       221 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
                      ++|||+|+..+..++++++++|+++.+|........++         ...++.+++++.++....+.     ....+.++
T Consensus       233 ~vi~~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~  307 (357)
T 2zb4_A          233 VYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYK-----DKFEPGIL  307 (357)
T ss_dssp             EEEESCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGG-----GGHHHHHH
T ss_pred             EEEECCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhh-----HHHHHHHH
Confidence            99999999888999999999999999987653212222         14567889999998664321     12244566


Q ss_pred             HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          292 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       292 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+++++.+|++++.+..+|+|+++++|++.+.+++..||+|+++
T Consensus       308 ~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          308 QLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             HHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEE
Confidence            69999999999988777799999999999999988889999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=5.8e-48  Score=356.82  Aligned_cols=305  Identities=21%  Similarity=0.286  Sum_probs=263.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      ||++.+...+.+..+++++.+.|+|.++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus        15 mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~P~v~GhE~~G~V~~vG~~V~~~~   93 (366)
T 1yqd_A           15 VKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF-SMYPLVPGHEIVGEVTEVGSKVKKVN   93 (366)
T ss_dssp             EEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             eeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC-CCCCEecccceEEEEEEECCCCCcCC
Confidence            67777777776777999999999999999999999999999999999886543 34689999999999999999999999


Q ss_pred             CCCEEEEe-----------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790           81 VGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        81 ~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +||+|+..                                   ..+|+|+||++++.+.++++|+++++++||++++++.
T Consensus        94 vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~  173 (366)
T 1yqd_A           94 VGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGI  173 (366)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHH
T ss_pred             CCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHH
Confidence            99999742                                   1458999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCC-CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCC
Q 019790          126 TVWSTVFMTSHLS-PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT  203 (335)
Q Consensus       126 ~a~~~l~~~~~~~-~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~  203 (335)
                      |||+++.+ .++. +|++|||          +| +|++|++++|+|+.+|++|+++++++++++.++ ++|++.++|+.+
T Consensus       174 ta~~al~~-~~~~~~g~~VlV----------~G-aG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~  241 (366)
T 1yqd_A          174 TVYSPLKY-FGLDEPGKHIGI----------VG-LGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRD  241 (366)
T ss_dssp             HHHHHHHH-TTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTC
T ss_pred             HHHHHHHh-cCcCCCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccC
Confidence            99999954 5777 9999999          98 599999999999999999999999999998887 899999998876


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhH
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK  282 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
                      .   +.+.+.++  ++|++|||+|.. .+..+++.++++|+++.+|..... ..++...++.+++++.++.....     
T Consensus       242 ~---~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~-----  310 (366)
T 1yqd_A          242 Q---EQMQAAAG--TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP-LELPAFSLIAGRKIVAGSGIGGM-----  310 (366)
T ss_dssp             H---HHHHHTTT--CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC-EEECHHHHHTTTCEEEECCSCCH-----
T ss_pred             H---HHHHHhhC--CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC-CCcCHHHHHhCCcEEEEecCCCH-----
Confidence            3   34555553  799999999985 578889999999999999876543 35677778889999998865431     


Q ss_pred             HHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          283 ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       283 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                           +.++.+++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+++
T Consensus       311 -----~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (366)
T 1yqd_A          311 -----KETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDV  357 (366)
T ss_dssp             -----HHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECH
T ss_pred             -----HHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEc
Confidence                 1233488999999998876 7999999999999999988889999863

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.8e-49  Score=363.70  Aligned_cols=299  Identities=14%  Similarity=0.135  Sum_probs=260.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCC---CCCCCCceEEEEEEecCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA---SPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~---p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |||+++..++.  .+++++.|.|+|+++||+|||.++|||++|++.+.|.++. ..+   |.++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~--~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCS--SCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT-SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCC--ceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC-CCCCCCCcccCceeEE-EEEECCC-C
Confidence            99999998876  3899999999999999999999999999999999987543 345   8899999999 9999999 9


Q ss_pred             CCCCCCEEEEe------c--------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHH
Q 019790           78 RWKVGDQVCAL------L--------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        78 ~~~~Gd~V~~~------~--------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +|++||+|++.      |                          .+|+|+||++++++.++++|++++ ++ |+++.+++
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~~~~  153 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIEPIS  153 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhchHH
Confidence            99999999875      1                          259999999999999999999999 55 55889999


Q ss_pred             HHHHHHHHhcCCCCC------CEEEEeeccccccccccccchHHHHH-HHHH-hhCCCe-EEEEecChh---hHHHHHHc
Q 019790          126 TVWSTVFMTSHLSPG------ESFLVDFCSISYSDVHGGSSGIGTFA-IQMG-KCQGVR-VFVTAGSEE---KLAVCKDL  193 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~------~~vli~~~~~~~~~~~g~~g~~G~~a-~~~a-~~~g~~-V~~~~~~~~---~~~~~~~~  193 (335)
                      |||+++ +..++++|      ++|||          +|+ |++|+++ +|+| +.+|++ |++++++++   +++.++++
T Consensus       154 ta~~al-~~~~~~~g~~~~~~~~VlV----------~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~l  221 (357)
T 2b5w_A          154 ITEKAL-EHAYASRSAFDWDPSSAFV----------LGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEEL  221 (357)
T ss_dssp             HHHHHH-HHHHHTTTTSCCCCCEEEE----------ECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHT
T ss_pred             HHHHHH-HhcCCCCCcccCCCCEEEE----------ECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHc
Confidence            999999 66888999      99999          997 9999999 9999 999997 999999998   99999999


Q ss_pred             CCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHH----hhcceE
Q 019790          194 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL----FAKRLT  268 (335)
Q Consensus       194 g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~----~~~~~~  268 (335)
                      |++.+ |+++.++.+ +++. .+ ++|++|||+|+. .+..++++++++|+++.+|.......+++...+    +.++++
T Consensus       222 Ga~~v-~~~~~~~~~-i~~~-~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~  297 (357)
T 2b5w_A          222 DATYV-DSRQTPVED-VPDV-YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKA  297 (357)
T ss_dssp             TCEEE-ETTTSCGGG-HHHH-SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCE
T ss_pred             CCccc-CCCccCHHH-HHHh-CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeE
Confidence            99999 988878877 7777 65 899999999986 678899999999999999876533346777777    789999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCC--c-cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVG--K-VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.++....          .+.++.+++++.+|  + ++++++++|+|+++++|++.+   +..||+|+++
T Consensus       298 i~g~~~~~----------~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          298 LVGSVNSH----------VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             EEECCCCC----------HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEEC
T ss_pred             EEEeccCC----------HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEe
Confidence            99876543          12345589999999  8 688889999999999999988   3468999875

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.9e-48  Score=359.99  Aligned_cols=306  Identities=19%  Similarity=0.287  Sum_probs=262.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCC-CCc------EEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEec
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDE------VLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG   73 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~-~~e------VlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG   73 (335)
                      |||+++..++   .+++++.|.|+|. ++|      |+|||.+++||++|++++.|..+  ..+|.++|||++|+|+++|
T Consensus         3 Mka~~~~~~~---~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            3 NRGVVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT--AQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             EEEEEEEETT---EEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC--CCTTCBCCCCEEEEEEEEC
T ss_pred             cEEEEEecCC---ceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC--CCCCcccCcccEEEEEEEC
Confidence            8999999765   3899999999997 888      99999999999999999998653  2468999999999999999


Q ss_pred             CCCCCCCCCCEEEEe-------------------------------------cCCcceeeEEEecCC--ceEeCCCCCCh
Q 019790           74 KNVSRWKVGDQVCAL-------------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSL  114 (335)
Q Consensus        74 ~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (335)
                      +++++|++||+|+..                                     ..+|+|+||++++.+  .++++|+++++
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            999999999999741                                     124899999999987  89999999998


Q ss_pred             hh----hccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHH
Q 019790          115 KD----AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV  189 (335)
Q Consensus       115 ~~----aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~  189 (335)
                      ++    +++++.+++|||+++. ..++++|++|||          +| +|++|++++|+|+.+|+ +|+++++++++++.
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV----------~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYV----------AG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAH  225 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             hhhcccccccccHHHHHHHHHH-HcCCCCCCEEEE----------EC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH
Confidence            88    7889999999999995 789999999999          98 69999999999999999 79999999999999


Q ss_pred             HHHcCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChh----------------hHHHhhccccCCCEEEEEeccC-
Q 019790          190 CKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGAS----------------YFQRNLGSLNIDGRLFIIGTQG-  251 (335)
Q Consensus       190 ~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~----------------~~~~~~~~l~~~G~~v~~g~~~-  251 (335)
                      ++++|++ ++++.+.+ +.+.+++.+++.++|++|||+|+.                .+..++++|+++|+++.+|... 
T Consensus       226 a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~  304 (398)
T 1kol_A          226 AKAQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVT  304 (398)
T ss_dssp             HHHTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCS
T ss_pred             HHHcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccC
Confidence            9999997 78877654 788899999888999999999975                5788999999999999998652 


Q ss_pred             CC-----------ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc---cccccccchhhHHH
Q 019790          252 GA-----------KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK---PVIYKYLPLCEAAE  317 (335)
Q Consensus       252 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~  317 (335)
                      +.           ...++...++.+++++.+.....          .+.++.+++++.+|+++   ++++++|+|+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~  374 (398)
T 1kol_A          305 EDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV----------MKYNRALMQAIMWDRINIAEVVGVQVISLDDAPR  374 (398)
T ss_dssp             CCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCCH----------HHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHH
T ss_pred             CcccccccccccccccccHHHHhhcccEEEecccCh----------HHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHH
Confidence            11           13455666788899988753211          12234588999999998   46789999999999


Q ss_pred             HHHHHHhCCCceeEEEeC
Q 019790          318 AHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       318 a~~~~~~~~~~gkvvi~~  335 (335)
                      |++.+.+++. ||+|+++
T Consensus       375 A~~~~~~~~~-gKvvi~~  391 (398)
T 1kol_A          375 GYGEFDAGVP-KKFVIDP  391 (398)
T ss_dssp             HHHHHHHTCS-CEEEECT
T ss_pred             HHHHHhCCCc-eEEEEEe
Confidence            9999998887 9999975

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.5e-49  Score=369.04  Aligned_cols=317  Identities=20%  Similarity=0.237  Sum_probs=267.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC----------------------------
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------------------------   52 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~----------------------------   52 (335)
                      |||++....  +..+++++.+.|+|++|||+|||.+++||++|++.+.|..+                            
T Consensus         8 mka~v~~~~--~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~   85 (379)
T 3iup_A            8 LRSRIKSSG--ELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMA   85 (379)
T ss_dssp             EEEEECTTS--EEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHG
T ss_pred             HHHHHhcCC--CCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccc
Confidence            788887532  34699999999999999999999999999999999988531                            


Q ss_pred             CCCCCCCCCCCceEEEEEEecCCC-CCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           53 PPKGASPYPGLECSGTILSVGKNV-SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        53 ~~~~~p~~~G~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      ....+|.++|||++|+|+++|+++ ++|++||+|++.. +|+|+||++++++.++++|+++++++||++++.++|||+++
T Consensus        86 ~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~  164 (379)
T 3iup_A           86 GRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV  164 (379)
T ss_dssp             GGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH
T ss_pred             cccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH
Confidence            023468899999999999999999 8899999999875 59999999999999999999999999999999999999887


Q ss_pred             HHhcCCCCCCEEEEeecccccccccc-ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHH
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV  210 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g-~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  210 (335)
                      ... . ++|++|||          +| |+|++|++++|+|+.+|++|+++++++++++.++++|++.++|+++.++.+.+
T Consensus       165 ~~~-~-~~g~~vlV----------~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v  232 (379)
T 3iup_A          165 ETM-R-LEGHSALV----------HTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDL  232 (379)
T ss_dssp             HHH-H-HTTCSCEE----------ESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHH
T ss_pred             HHh-c-cCCCEEEE----------ECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHH
Confidence            544 4 89999999          96 79999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCcccEEEeCCChhh-HHHhhcccc-----CC-----------CEEEEEeccCCCccccChhHHhhcceEEEEee
Q 019790          211 KEETGGKGVDVILDCMGASY-FQRNLGSLN-----ID-----------GRLFIIGTQGGAKTELNITSLFAKRLTVQAAG  273 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~-~~~~~~~l~-----~~-----------G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  273 (335)
                      ++.+++.++|++|||+|+.. +..++++++     ++           |+++.+|.....  +.+...++.+++++.+++
T Consensus       233 ~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~--~~~~~~~~~~~~~i~g~~  310 (379)
T 3iup_A          233 TEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS--PTEFNRNFGMAWGMGGWL  310 (379)
T ss_dssp             HHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE--EEEECCCSCSCEEEEECC
T ss_pred             HHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC--ccccccccccceEEEEEE
Confidence            99998888999999999854 466667664     44           566655543322  233344567889999987


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhH--HHHHHHHHhCCCceeEEEeC
Q 019790          274 LRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA--AEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~--~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +..+.........++.++.+.+++.+ .++++++++|+|+++  ++|++.+.+++..||+|++|
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~  373 (379)
T 3iup_A          311 LFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINP  373 (379)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEET
T ss_pred             eeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeC
Confidence            76553322334456667778888888 588999999999999  99999999999999999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=2.6e-47  Score=382.22  Aligned_cols=310  Identities=26%  Similarity=0.392  Sum_probs=271.8

Q ss_pred             EEEEcCCCCCcceEEEeecC--CCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            3 AIVITQPGSPEVLQLQEVED--PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         3 a~~~~~~~~~~~l~~~~~~~--~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      .+.+..+|.++.+++++.+.  |+|++|||+|||.++|||++|++++.|.++.    |.++|||++|+|+++|+++++|+
T Consensus       212 ~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~~----~~~lG~E~aG~V~~vG~~V~~~~  287 (795)
T 3slk_A          212 RLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG----VASLGSEGAGVVVETGPGVTGLA  287 (795)
T ss_dssp             CEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCSS----CCCSCCCEEEEEEEECSSCCSSC
T ss_pred             EEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCCC----CccccceeEEEEEEeCCCCCcCC
Confidence            35667888889999999874  6789999999999999999999999997754    56899999999999999999999


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccc
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSS  160 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g  160 (335)
                      +||+|+++. +|+|++|++++.+.++++|+++++++||++++.++|||+++.+.+++++|++|||          +|++|
T Consensus       288 vGDrV~~~~-~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI----------~gaaG  356 (795)
T 3slk_A          288 PGDRVMGMI-PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLV----------HSAAG  356 (795)
T ss_dssp             TTCEEEECC-SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEE----------ESTTB
T ss_pred             CCCEEEEEe-cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEE----------ecCCC
Confidence            999999985 5999999999999999999999999999999999999999988899999999999          99999


Q ss_pred             hHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccC
Q 019790          161 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI  240 (335)
Q Consensus       161 ~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~  240 (335)
                      ++|++++|+||.+|++|+++++++ +.+.++ +|+++++++.+.++.+.+++.++++++|+||||+|++.+..++++|++
T Consensus       357 gvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~  434 (795)
T 3slk_A          357 GVGMAAIQLARHLGAEVYATASED-KWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPR  434 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcC
Confidence            999999999999999999999665 555555 999999999999999999999999999999999999889999999999


Q ss_pred             CCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 019790          241 DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ  320 (335)
Q Consensus       241 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~  320 (335)
                      +|+++.+|...... .... ....+++++.+..+..    .......+.++.+++++.+|++++++.++|+++++++||+
T Consensus       435 ~Gr~v~iG~~~~~~-~~~~-~~~~~~~~~~~~~l~~----~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~  508 (795)
T 3slk_A          435 GGRFLELGKTDVRD-PVEV-ADAHPGVSYQAFDTVE----AGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALR  508 (795)
T ss_dssp             CEEEEECCSTTCCC-HHHH-HHHSSSEEEEECCGGG----GHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHH
T ss_pred             CCEEEEeccccccC-cccc-cccCCCCEEEEeeccc----cCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHH
Confidence            99999998654321 1111 1234677777765532    2233456677889999999999999999999999999999


Q ss_pred             HHHhCCCceeEEEeC
Q 019790          321 LMESSQHIGKIMLVP  335 (335)
Q Consensus       321 ~~~~~~~~gkvvi~~  335 (335)
                      .+.+++..||+|+++
T Consensus       509 ~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          509 HLSQARHVGKLVLTM  523 (795)
T ss_dssp             HHHHTCCCBEEEEEC
T ss_pred             HHhcCCccceEEEec
Confidence            999999999999874

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=9.6e-45  Score=331.32  Aligned_cols=310  Identities=18%  Similarity=0.247  Sum_probs=262.0

Q ss_pred             CEEEEEcCC--CC--CcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCC
Q 019790            1 MKAIVITQP--GS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV   76 (335)
Q Consensus         1 mka~~~~~~--~~--~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~   76 (335)
                      |||+++...  |.  ++.+++++.+.|+|.+|||+|||.++|||+.|+. +.+    +..+|.++|||++|+|++.  ++
T Consensus         8 mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~----~~~~p~~~g~e~~G~Vv~~--~v   80 (333)
T 1v3u_A            8 AKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASK----RLKEGAVMMGQQVARVVES--KN   80 (333)
T ss_dssp             EEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HTT----TCCTTSBCCCCEEEEEEEE--SC
T ss_pred             ccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-ccC----cCCCCcccccceEEEEEec--CC
Confidence            799999875  43  3779999999999999999999999999999873 221    2235788999999999995  57


Q ss_pred             CCCCCCCEEEEecCCcceeeEEEecCCceEeCCCC----CChhh-hccCcchHHHHHHHHHHhcCCCCCCEEEEeecccc
Q 019790           77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG----VSLKD-AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSIS  151 (335)
Q Consensus        77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~----~~~~~-aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~  151 (335)
                      ++|++||+|++.   |+|+||++++.+.++++|++    +++++ +++++++++|||+++.+..++++|+++||      
T Consensus        81 ~~~~vGdrV~~~---g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV------  151 (333)
T 1v3u_A           81 SAFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLV------  151 (333)
T ss_dssp             TTSCTTCEEEEC---CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEE------
T ss_pred             CCCCCCCEEEec---CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEE------
Confidence            889999999986   89999999999999999997    88887 48899999999999988889999999999      


Q ss_pred             ccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          152 YSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       152 ~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                          +|++|++|++++++++..|++|+++++++++.+.++++|++.++|..+ .++.+.+.+.+. +++|++|||+|+..
T Consensus       152 ----~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~~  226 (333)
T 1v3u_A          152 ----SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASP-DGYDCYFDNVGGEF  226 (333)
T ss_dssp             ----ESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCT-TCEEEEEESSCHHH
T ss_pred             ----ecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhC-CCCeEEEECCChHH
Confidence                998899999999999999999999999999999999999999999887 788888888776 48999999999988


Q ss_pred             HHHhhccccCCCEEEEEeccCCCc------cccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc
Q 019790          231 FQRNLGSLNIDGRLFIIGTQGGAK------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP  304 (335)
Q Consensus       231 ~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  304 (335)
                      +..++++++++|+++.+|......      ...+...++.+++++.++....+...    ...+.++.+++++.+|++++
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~----~~~~~~~~~~~l~~~g~l~~  302 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGD----VREKALRDLMKWVLEGKIQY  302 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTH----HHHHHHHHHHHHHHTTSSCC
T ss_pred             HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchH----HHHHHHHHHHHHHHCCCccC
Confidence            889999999999999998765321      11356677889999999876543211    23445666999999999998


Q ss_pred             ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          305 VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       305 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      .+..+++|+++++|++.+.+++..||+|+++
T Consensus       303 ~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          303 HEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             CEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            7767789999999999999988889999875

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=1.6e-46  Score=347.23  Aligned_cols=301  Identities=17%  Similarity=0.211  Sum_probs=254.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCC-CcEEEEEEEeecCcchhhhhcC--CCCCCCCC---CCCCCCceEEEEEEecC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKG--SYPPPKGA---SPYPGLECSGTILSVGK   74 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~-~eVlI~v~~~~i~~~D~~~~~g--~~~~~~~~---p~~~G~e~~G~V~~vG~   74 (335)
                      |||+++..++++  +++++.+.|+|++ +||+|||.++|||++|++.+.|  .++. ..+   |.++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~--l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~-~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAG--VQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLST-LPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCC--CEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC--------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCc--eEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCC-CCcCCCCCcCCcceEEEEEe--C
Confidence            999999998864  8999999999999 9999999999999999999998  5432 235   88999999999999  7


Q ss_pred             CCCCCCCCCEEEEec------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchH
Q 019790           75 NVSRWKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA  124 (335)
Q Consensus        75 ~~~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~  124 (335)
                      + ++|++||+|++..                              .+|+|+||++++++.++++|++++ ++|+ ++.++
T Consensus        76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~~~~  152 (366)
T 2cdc_A           76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LAQPL  152 (366)
T ss_dssp             C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GHHHH
T ss_pred             C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hcCcH
Confidence            7 8899999998631                              469999999999999999999999 7765 88899


Q ss_pred             HHHHHHHH--H--hcCCC--C-------CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh---hhHH
Q 019790          125 CTVWSTVF--M--TSHLS--P-------GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---EKLA  188 (335)
Q Consensus       125 ~~a~~~l~--~--~~~~~--~-------~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~  188 (335)
                      +|||+++.  +  ..+++  +       |++|||          +|+ |++|++++|+|+.+|++|+++++++   ++.+
T Consensus       153 ~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV----------~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          153 ADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLV----------VGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEE----------ESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             HHHHHHHHhhhhcccCccccccccccCCCCEEEE----------ECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            99999996  4  77888  8       999999          997 9999999999999999999999998   8889


Q ss_pred             HHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hH-HHhhccccCCCEEEEEeccCCCccccChhH---Hh
Q 019790          189 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YF-QRNLGSLNIDGRLFIIGTQGGAKTELNITS---LF  263 (335)
Q Consensus       189 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~---~~  263 (335)
                      .++++|++.+ | .+ ++.+.+.+ ++ .++|++|||+|.. .+ ..+++.|+++|+++.+|........++...   ++
T Consensus       222 ~~~~~ga~~v-~-~~-~~~~~~~~-~~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~  296 (366)
T 2cdc_A          222 VIEETKTNYY-N-SS-NGYDKLKD-SV-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIV  296 (366)
T ss_dssp             HHHHHTCEEE-E-CT-TCSHHHHH-HH-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHH
T ss_pred             HHHHhCCcee-c-hH-HHHHHHHH-hC-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHH
Confidence            9999999888 7 66 66667776 55 5899999999985 57 889999999999999987654334566666   78


Q ss_pred             hcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc------cccccccccchhhHHHHHHHH-HhCCCceeEEEeC
Q 019790          264 AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK------VKPVIYKYLPLCEAAEAHQLM-ESSQHIGKIMLVP  335 (335)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~l~~~~~a~~~~-~~~~~~gkvvi~~  335 (335)
                      .+++++.++....          .+.++.+++++.+|+      ++++++++|+|+++++|++.+ .+++..||+|+++
T Consensus       297 ~~~~~i~g~~~~~----------~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          297 HTNKTIIGLVNGQ----------KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             HTTCEEEECCCCC----------HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             hcCcEEEEecCCC----------HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence            8999999876532          123445889999998      667888999999999999994 3356678999875

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=5.3e-44  Score=327.99  Aligned_cols=314  Identities=22%  Similarity=0.275  Sum_probs=262.3

Q ss_pred             CEEEEEcCC--CCCc--ceEEE--eecCCC-CCCCcEEEEEEEeecCcchhhhhcCCCCCC---CCCCCCCCCceEEEEE
Q 019790            1 MKAIVITQP--GSPE--VLQLQ--EVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTIL   70 (335)
Q Consensus         1 mka~~~~~~--~~~~--~l~~~--~~~~~~-~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~   70 (335)
                      ||++++...  +.|.  .++++  +.+.|. |++|||+|||.++++++.|. ...|.....   ..+|+++|||++|+++
T Consensus         5 mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~   83 (345)
T 2j3h_A            5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGV   83 (345)
T ss_dssp             EEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEE
T ss_pred             ceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceE
Confidence            689998876  5665  69998  888886 89999999999999888775 444543211   2358899999999999


Q ss_pred             E--ecCCCCCCCCCCEEEEecCCcceeeEEEecCCc--eEeCCC---CCChhhhccCcchHHHHHHHHHHhcCCCCCCEE
Q 019790           71 S--VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VLPVPS---GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESF  143 (335)
Q Consensus        71 ~--vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~~~p~---~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~v  143 (335)
                      +  +|+++++|++||+|+++   |+|+||++++.+.  ++++|+   .++++ +|+++++++|||+++.+..++++|+++
T Consensus        84 ~GvV~~~v~~~~vGdrV~~~---g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~v  159 (345)
T 2j3h_A           84 SRIIESGHPDYKKGDLLWGI---VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETV  159 (345)
T ss_dssp             EEEEEECSTTCCTTCEEEEE---EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEE
T ss_pred             EEEEecCCCCCCCCCEEEee---cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEE
Confidence            9  99999999999999987   8899999998876  999996   35555 677999999999999888899999999


Q ss_pred             EEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCC-ccHHHHHHHHhCCCcccE
Q 019790          144 LVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDV  221 (335)
Q Consensus       144 li~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~  221 (335)
                      ||          +|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+ .++.+.+++.++ .++|+
T Consensus       160 lI----------~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~-~~~d~  228 (345)
T 2j3h_A          160 YV----------SAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFP-NGIDI  228 (345)
T ss_dssp             EE----------SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCT-TCEEE
T ss_pred             EE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhC-CCCcE
Confidence            99          998899999999999999999999999999999998 799999998876 367777777764 58999


Q ss_pred             EEeCCChhhHHHhhccccCCCEEEEEeccCCC-----ccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHH
Q 019790          222 ILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-----KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA  296 (335)
Q Consensus       222 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (335)
                      +|||+|+..+..++++++++|+++.+|.....     ...++...++.+++++.++.......     ...+.++.++++
T Consensus       229 vi~~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~l  303 (345)
T 2j3h_A          229 YFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYD-----KYSKFLEFVLPH  303 (345)
T ss_dssp             EEESSCHHHHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGG-----GHHHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhh-----hHHHHHHHHHHH
Confidence            99999998888999999999999999876531     23455667788999999876543211     123456669999


Q ss_pred             HHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 019790          297 IAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       297 ~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      +.+|++++.+.++|+|+++++|++.+.+++..||+|+.+
T Consensus       304 ~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          304 IREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             HHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred             HHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence            999999988878899999999999999998899999875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=2.5e-36  Score=331.12  Aligned_cols=310  Identities=27%  Similarity=0.377  Sum_probs=261.2

Q ss_pred             EEcCCCCCcceEEEeecCCC-CC--CCcEEEEEEEeecCcchhhhhcCCCCCC------CCCCCCCCCceEEEEEEecCC
Q 019790            5 VITQPGSPEVLQLQEVEDPQ-IK--DDEVLIKVEATALNRADTLQRKGSYPPP------KGASPYPGLECSGTILSVGKN   75 (335)
Q Consensus         5 ~~~~~~~~~~l~~~~~~~~~-~~--~~eVlI~v~~~~i~~~D~~~~~g~~~~~------~~~p~~~G~e~~G~V~~vG~~   75 (335)
                      ....+|..+.+.+.+.+... +.  ++||+|+|.++|+|+.|+++..|..+..      ...|.++|+|++|+|      
T Consensus      1534 ~~~~~g~l~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V------ 1607 (2512)
T 2vz8_A         1534 NVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD------ 1607 (2512)
T ss_dssp             EESSTTCTTSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE------
T ss_pred             EccCCCCcCceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE------
Confidence            34456777788888877543 33  7999999999999999999999876431      123568999999987      


Q ss_pred             CCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccc
Q 019790           76 VSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV  155 (335)
Q Consensus        76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~  155 (335)
                          .+||+|+++..+|+|++|++++.+.++++|+++++++||+++++++|||+++.+.+++++|++|||          
T Consensus      1608 ----~vGdrV~g~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI---------- 1673 (2512)
T 2vz8_A         1608 ----ASGRRVMGMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI---------- 1673 (2512)
T ss_dssp             ----TTSCCEEEECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE----------
T ss_pred             ----ccCCEEEEeecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE----------
Confidence                279999999888999999999999999999999999999999999999999988899999999999          


Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                      +|++|++|++++|+|+.+|++|++++.++++.+.+++    +|+++++++.+.++.+.+++.++++++|+||||++++.+
T Consensus      1674 ~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~~l 1753 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKL 1753 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHHHH
T ss_pred             EeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCchHH
Confidence            9999999999999999999999999999999999886    688999999999999999999998899999999998889


Q ss_pred             HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccccc
Q 019790          232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLP  311 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  311 (335)
                      ..++++++++|+++.+|.............++.+++++.++.+...... ......+.++.+.+++.+|.+++++.++|+
T Consensus      1754 ~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~-~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~ 1832 (2512)
T 2vz8_A         1754 QASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEE-GGATWQEVSELLKAGIQEGVVQPLKCTVFP 1832 (2512)
T ss_dssp             HHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSS-CCHHHHHHHHHHHHHHTTTCSCCCCEEEEE
T ss_pred             HHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhh-CHHHHHHHHHHHHHHHHcCCcCCCcceEec
Confidence            9999999999999999854322111222345678999998876543211 112345555667777788999999999999


Q ss_pred             hhhHHHHHHHHHhCCCceeEEEeC
Q 019790          312 LCEAAEAHQLMESSQHIGKIMLVP  335 (335)
Q Consensus       312 l~~~~~a~~~~~~~~~~gkvvi~~  335 (335)
                      ++++++|++.+.+++..||+|+.+
T Consensus      1833 l~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1833 RTKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             SSTHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHhhhccCccceEEEEC
Confidence            999999999999999999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.91  E-value=2.1e-23  Score=175.79  Aligned_cols=195  Identities=26%  Similarity=0.445  Sum_probs=147.4

Q ss_pred             CceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec
Q 019790          103 GQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG  182 (335)
Q Consensus       103 ~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~  182 (335)
                      +.++++|+++++++||+++++++|||+++.+..++++|+++||          +|++|++|.+++++++..|++|+++++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV----------~Ga~ggiG~~~~~~~~~~G~~V~~~~~   71 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLI----------HSATGGVGMAAVSIAKMIGARIYTTAG   71 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------TTTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEE----------eeCCChHHHHHHHHHHHcCCEEEEEeC
Confidence            4678999999999999999999999999977789999999999          999999999999999999999999999


Q ss_pred             ChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCC-ccccChhH
Q 019790          183 SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS  261 (335)
Q Consensus       183 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~  261 (335)
                      ++++.+.++++|++.++|..+.++.+.+.+.+.+.++|++|||+|...+..++++|+++|+++.+|..... ...++.. 
T Consensus        72 ~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-  150 (198)
T 1pqw_A           72 SDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLA-  150 (198)
T ss_dssp             SHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-
T ss_pred             CHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-
Confidence            99998888889998888888888888888887767899999999988888999999999999999876521 1223332 


Q ss_pred             HhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccccccccc
Q 019790          262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY  309 (335)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  309 (335)
                      .+.+++++.+..+. ...........+.++.+++++++|++++.+.++
T Consensus       151 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  197 (198)
T 1pqw_A          151 ALAKSASFSVVDLD-LNLKLQPARYRQLLQHILQHVADGKLEVLPVTA  197 (198)
T ss_dssp             GGTTTCEEEECCHH-HHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred             HhcCCcEEEEEehH-HhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence            34678888875441 110001112345677799999999998876544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.79  E-value=2.5e-08  Score=91.20  Aligned_cols=144  Identities=12%  Similarity=0.057  Sum_probs=97.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE--EEeCCCccHHHHHHHHhCCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~  217 (335)
                      +++++|          +|+ |++|.++++.++.+|++|+++++++++.+.+++.+...  +++.+..++.+.+      .
T Consensus       167 ~~~VlV----------iGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~  229 (361)
T 1pjc_A          167 PGKVVI----------LGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV------A  229 (361)
T ss_dssp             CCEEEE----------ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH------H
T ss_pred             CCEEEE----------ECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHH------c
Confidence            478999          985 99999999999999999999999999998887765432  3333323332222      2


Q ss_pred             cccEEEeCCChhh-------HHHhhccccCCCEEEEEeccCCC------ccccChhHHhhcceEEEEeecccc-chhhHH
Q 019790          218 GVDVILDCMGASY-------FQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQAAGLRSR-STENKA  283 (335)
Q Consensus       218 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  283 (335)
                      ++|++|+|++...       ....++.++++|+++.++...+.      ..+++...+..+++++.+...... ......
T Consensus       230 ~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s  309 (361)
T 1pjc_A          230 EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTAT  309 (361)
T ss_dssp             TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHH
T ss_pred             CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHH
Confidence            5899999997643       45678899999999999865532      223444445567788776542221 111111


Q ss_pred             HH-HHHHHHHHHHHHHCC
Q 019790          284 LI-VSEVEKNVWPAIAVG  300 (335)
Q Consensus       284 ~~-~~~~~~~~~~~~~~g  300 (335)
                      .. ....++.+++++.+|
T Consensus       310 ~~~~~~~~~~l~~l~~~G  327 (361)
T 1pjc_A          310 QALNNSTLPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHhCC
Confidence            12 244566788888777

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.56  E-value=9e-07  Score=81.04  Aligned_cols=147  Identities=15%  Similarity=0.173  Sum_probs=88.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      ++.+++|          +|+ |.+|..+++.++..|++|+++++++++.+.+++ ++.....+..+.   ..+.+..  .
T Consensus       165 ~~~~V~V----------iGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~---~~l~~~~--~  228 (369)
T 2eez_A          165 APASVVI----------LGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATE---ANIKKSV--Q  228 (369)
T ss_dssp             CCCEEEE----------ECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCH---HHHHHHH--H
T ss_pred             CCCEEEE----------ECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCH---HHHHHHH--h
Confidence            3578999          996 999999999999999999999999998887765 676643333222   1233332  2


Q ss_pred             cccEEEeCCChhh-------HHHhhccccCCCEEEEEeccCCCc------cccChhHHhhcceEEEEeeccc-cchhhHH
Q 019790          218 GVDVILDCMGASY-------FQRNLGSLNIDGRLFIIGTQGGAK------TELNITSLFAKRLTVQAAGLRS-RSTENKA  283 (335)
Q Consensus       218 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  283 (335)
                      ++|++++|++...       ....++.++++|+++.++...+..      .+++...+..+++++.+..... .......
T Consensus       229 ~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as  308 (369)
T 2eez_A          229 HADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTST  308 (369)
T ss_dssp             HCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHH
T ss_pred             CCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHH
Confidence            6899999998642       467788999999999987654321      1222233345667776654221 1111111


Q ss_pred             HH-HHHHHHHHHHHHHCCc
Q 019790          284 LI-VSEVEKNVWPAIAVGK  301 (335)
Q Consensus       284 ~~-~~~~~~~~~~~~~~g~  301 (335)
                      .. -...++.+++++.+|.
T Consensus       309 ~~~~~~~~~~l~~l~~~g~  327 (369)
T 2eez_A          309 FALTNQTLPYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhcCh
Confidence            11 1344555666666653

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.50  E-value=5.3e-10  Score=103.82  Aligned_cols=171  Identities=16%  Similarity=0.224  Sum_probs=123.9

Q ss_pred             CCCCceEEEEEEecCCCCCCCCCCEEEE---------ecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790           60 YPGLECSGTILSVGKNVSRWKVGDQVCA---------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~~---------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~  130 (335)
                      ..|++.++.|.++|++++.+.+|+.++.         ....|++++|+......++.+|+.++.+.++. ..+..++|.+
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~a  154 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAA  154 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHH
Confidence            4788999999999999999999998621         11236788888777778888888887777653 4566677777


Q ss_pred             HHHhc---CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhH-HHHHHcCCCEEEeCCCcc
Q 019790          131 VFMTS---HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-AVCKDLGADVCINYKTED  205 (335)
Q Consensus       131 l~~~~---~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~  205 (335)
                      +....   .-.+|++++|          +| .|.+|.++++.++..|+ +|++++++.++. +.++++|++ +++.  .+
T Consensus       155 v~~a~~~~~~l~g~~VlI----------iG-aG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~  220 (404)
T 1gpj_A          155 VELAERELGSLHDKTVLV----------VG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DE  220 (404)
T ss_dssp             HHHHHHHHSCCTTCEEEE----------ES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GG
T ss_pred             HHHHHHHhccccCCEEEE----------EC-hHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecH--Hh
Confidence            64322   1257899999          88 59999999999999999 999999998886 566678875 3332  22


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChhh-H--HHhhcc--c--cCCCEEEEEeccC
Q 019790          206 FVARVKEETGGKGVDVILDCMGASY-F--QRNLGS--L--NIDGRLFIIGTQG  251 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~-~--~~~~~~--l--~~~G~~v~~g~~~  251 (335)
                      +.+    ..  .++|+|++|++... +  ...+..  +  +++|.++.++...
T Consensus       221 l~~----~l--~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          221 LVD----HL--ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             HHH----HH--HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             HHH----Hh--cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence            322    22  26899999998643 2  234444  3  5577787776544

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.43  E-value=6.2e-07  Score=82.58  Aligned_cols=123  Identities=15%  Similarity=0.167  Sum_probs=86.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCC--------------
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKT--------------  203 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~--------------  203 (335)
                      ++.+|+|          +| .|.+|++++++++.+|++|++.++++++.+.++++|+..+ ++..+              
T Consensus       171 ~g~~V~V----------iG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~  239 (384)
T 1l7d_A          171 PPARVLV----------FG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEM  239 (384)
T ss_dssp             CCCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC------------------
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhc
Confidence            5789999          88 7999999999999999999999999998888888887654 12211              


Q ss_pred             -c----cHHHHHHHHhCCCcccEEEeCC---Chhh----HHHhhccccCCCEEEEEeccCCCcc--ccChhHHhhcceEE
Q 019790          204 -E----DFVARVKEETGGKGVDVILDCM---GASY----FQRNLGSLNIDGRLFIIGTQGGAKT--ELNITSLFAKRLTV  269 (335)
Q Consensus       204 -~----~~~~~~~~~~~~~~~d~vid~~---g~~~----~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~  269 (335)
                       .    ...+.+.+...  ++|+||+|+   |...    ....+..|++++.++.++...+...  +.+...+..+++++
T Consensus       240 s~~~~~~~~~~l~~~~~--~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i  317 (384)
T 1l7d_A          240 GEEFRKKQAEAVLKELV--KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKI  317 (384)
T ss_dssp             -----CCHHHHHHHHHT--TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEE
T ss_pred             CHHHHhhhHHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEE
Confidence             0    01222445553  589999999   5322    2678899999999999986443221  12333445677888


Q ss_pred             EEeec
Q 019790          270 QAAGL  274 (335)
Q Consensus       270 ~~~~~  274 (335)
                      .+...
T Consensus       318 ~g~~~  322 (384)
T 1l7d_A          318 VGHTN  322 (384)
T ss_dssp             ECCSS
T ss_pred             EEeCC
Confidence            87643

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.43  E-value=1.7e-06  Score=79.40  Aligned_cols=119  Identities=13%  Similarity=0.143  Sum_probs=82.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      ++.+|+|          +| .|.+|.++++.++.+|++|++.++++++.+.+++ +|.....+....   ..+.+..  .
T Consensus       167 ~g~~V~V----------iG-~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~---~~l~~~l--~  230 (377)
T 2vhw_A          167 EPADVVV----------IG-AGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSA---YELEGAV--K  230 (377)
T ss_dssp             CCCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCH---HHHHHHH--H
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCH---HHHHHHH--c
Confidence            5788999          88 5999999999999999999999999999888876 676532222111   1223332  2


Q ss_pred             cccEEEeCCChhh-------HHHhhccccCCCEEEEEeccCC------CccccChhHHhhcceEEEEee
Q 019790          218 GVDVILDCMGASY-------FQRNLGSLNIDGRLFIIGTQGG------AKTELNITSLFAKRLTVQAAG  273 (335)
Q Consensus       218 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~~~~~~~  273 (335)
                      ++|+|++|++...       ....+..++++|.++.++...+      ...+++...+..+++++.+..
T Consensus       231 ~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~p  299 (377)
T 2vhw_A          231 RADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVA  299 (377)
T ss_dssp             HCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBT
T ss_pred             CCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecC
Confidence            5899999987532       4677889999999999985443      122233333345667665443

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.36  E-value=4.8e-07  Score=85.32  Aligned_cols=164  Identities=16%  Similarity=0.140  Sum_probs=108.0

Q ss_pred             CceEEEEEEecCCCCCCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhc-CCCCCC
Q 019790           63 LECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGE  141 (335)
Q Consensus        63 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~-~~~~~~  141 (335)
                      .++.|+|+++|.+++++.      .+...|.+......-.+.+.+.    .+.   .+.....++|+++.+.. ...+|+
T Consensus       209 ~~i~GvveetgtGVd~l~------a~~~~Gilv~~~~~vn~sVae~----~~r---~l~~~~~s~~~g~~r~~~~~l~Gk  275 (494)
T 3ce6_A          209 ESVKGVTEETTTGVLRLY------QFAAAGDLAFPAINVNDSVTKS----KFD---NKYGTRHSLIDGINRGTDALIGGK  275 (494)
T ss_dssp             HHCCCEEECSHHHHHHHH------HHHHTTCCCSCEEECTTSHHHH----TTH---HHHHHHHHHHHHHHHHHCCCCTTC
T ss_pred             cCeEEEEEEeCCChhHHH------HHHHcCCEEEecCCccHHHHHH----HHh---hhhhhhhhhhHHHHhccCCCCCcC
Confidence            789999999998887651      1112233332222111122210    000   11223345666664433 267899


Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  221 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (335)
                      +|+|          .| .|.+|..+++.++..|++|+++++++.+.+.+++.|++ +.+     +.+    ..  .++|+
T Consensus       276 tV~I----------iG-~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~~-----l~e----~l--~~aDv  332 (494)
T 3ce6_A          276 KVLI----------CG-YGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VVT-----VEE----AI--GDADI  332 (494)
T ss_dssp             EEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC-----HHH----HG--GGCSE
T ss_pred             EEEE----------Ec-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Eec-----HHH----HH--hCCCE
Confidence            9999          88 69999999999999999999999999998888888875 221     222    22  36899


Q ss_pred             EEeCCChhh-HH-HhhccccCCCEEEEEeccCCCccccChhHHhhc
Q 019790          222 ILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK  265 (335)
Q Consensus       222 vid~~g~~~-~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  265 (335)
                      |++|+++.. +. ..+..++++|+++.+|...   ..++...+..+
T Consensus       333 Vi~atgt~~~i~~~~l~~mk~ggilvnvG~~~---~eId~~aL~~~  375 (494)
T 3ce6_A          333 VVTATGNKDIIMLEHIKAMKDHAILGNIGHFD---NEIDMAGLERS  375 (494)
T ss_dssp             EEECSSSSCSBCHHHHHHSCTTCEEEECSSSG---GGBCHHHHHHT
T ss_pred             EEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC---CccCHHHHHHh
Confidence            999999765 33 6788899999999998643   23555555543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.16  E-value=1.8e-05  Score=73.12  Aligned_cols=123  Identities=18%  Similarity=0.241  Sum_probs=84.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE-eCC-------------Cc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYK-------------TE  204 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~-------------~~  204 (335)
                      ++.+|+|          +| .|.+|+.++++|+.+|++|++++++.++.+.++++|+..+. +..             ..
T Consensus       171 ~g~~V~V----------iG-aG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~  239 (401)
T 1x13_A          171 PPAKVMV----------IG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSD  239 (401)
T ss_dssp             CCCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSH
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccH
Confidence            4778999          88 69999999999999999999999999998888888876431 110             01


Q ss_pred             cH----HHHHHHHhCCCcccEEEeCC---Ch-h-h--HHHhhccccCCCEEEEEeccCCCccccCh--h-HHhhcceEEE
Q 019790          205 DF----VARVKEETGGKGVDVILDCM---GA-S-Y--FQRNLGSLNIDGRLFIIGTQGGAKTELNI--T-SLFAKRLTVQ  270 (335)
Q Consensus       205 ~~----~~~~~~~~~~~~~d~vid~~---g~-~-~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~-~~~~~~~~~~  270 (335)
                      ++    ...+.+...  ++|+||+|+   |. . .  ....+..|++++.++.++...+...+...  . .+..+++++.
T Consensus       240 ~~~~~~~~~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~  317 (401)
T 1x13_A          240 AFIKAEMELFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVI  317 (401)
T ss_dssp             HHHHHHHHHHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEE
T ss_pred             HHHHHHHHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEE
Confidence            11    112444443  589999995   21 1 2  25688899999999999865333222221  1 1456788888


Q ss_pred             Eeec
Q 019790          271 AAGL  274 (335)
Q Consensus       271 ~~~~  274 (335)
                      +...
T Consensus       318 g~~~  321 (401)
T 1x13_A          318 GYTD  321 (401)
T ss_dssp             CCSC
T ss_pred             eeCC
Confidence            7643

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=97.96  E-value=1.1e-05  Score=69.18  Aligned_cols=98  Identities=14%  Similarity=0.151  Sum_probs=70.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--CEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~~~~~~~~~~~  206 (335)
                      ...++.++++||.          .| +| .|..+..+++. +.+|++++.+++..+.+++    .+.  ...+...  ++
T Consensus        85 ~~~~~~~~~~vld----------iG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~--d~  149 (248)
T 2yvl_A           85 LKLNLNKEKRVLE----------FG-TG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV--DF  149 (248)
T ss_dssp             HHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS--CT
T ss_pred             HhcCCCCCCEEEE----------eC-CC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc--Ch
Confidence            5677889999999          87 55 68899999998 8899999999998887764    232  2222111  11


Q ss_pred             HHHHHHHh-CCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEec
Q 019790          207 VARVKEET-GGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       207 ~~~~~~~~-~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  249 (335)
                          .+.. ...+||+|+.+.+.  ..+..+.+.|+++|+++....
T Consensus       150 ----~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          150 ----KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             ----TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             ----hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence                1112 33579999988775  347888999999999988753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.78  E-value=1.7e-05  Score=62.31  Aligned_cols=106  Identities=12%  Similarity=0.069  Sum_probs=72.2

Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCEEEeCC
Q 019790          124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYK  202 (335)
Q Consensus       124 ~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~~~  202 (335)
                      .+.+++++.. .....+.+++|          +| +|.+|.+.++.++..|++|++.++++++.+.+ ++++... ....
T Consensus         6 ~sv~~~a~~~-~~~~~~~~v~i----------iG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~   72 (144)
T 3oj0_A            6 VSIPSIVYDI-VRKNGGNKILL----------VG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLIN   72 (144)
T ss_dssp             CSHHHHHHHH-HHHHCCCEEEE----------EC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECS
T ss_pred             ccHHHHHHHH-HHhccCCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-Eeec
Confidence            3445555532 22234889999          88 69999999999998999999999998887664 4667432 2222


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                        ++.+.+      ..+|+|+.|++..........+++++.++.++.+
T Consensus        73 --~~~~~~------~~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p  112 (144)
T 3oj0_A           73 --DIDSLI------KNNDVIITATSSKTPIVEERSLMPGKLFIDLGNP  112 (144)
T ss_dssp             --CHHHHH------HTCSEEEECSCCSSCSBCGGGCCTTCEEEECCSS
T ss_pred             --CHHHHh------cCCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCC
Confidence              222222      2589999999976422223677888888888754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.75  E-value=0.00013  Score=66.72  Aligned_cols=122  Identities=17%  Similarity=0.160  Sum_probs=81.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEe-------------CCC--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCIN-------------YKT--  203 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~-------------~~~--  203 (335)
                      ++.+|+|          +| .|.+|+.++++++.+|++|++.++++++++.++++|+..+..             +..  
T Consensus       189 ~~~kV~V----------iG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~  257 (405)
T 4dio_A          189 PAAKIFV----------MG-AGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEM  257 (405)
T ss_dssp             CCCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC----------------
T ss_pred             CCCEEEE----------EC-CcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhc
Confidence            5678888          88 699999999999999999999999999999999888753211             000  


Q ss_pred             -ccH----HHHHHHHhCCCcccEEEeCCC--h---h--hHHHhhccccCCCEEEEEeccCCCcccc--ChhHHhhcceEE
Q 019790          204 -EDF----VARVKEETGGKGVDVILDCMG--A---S--YFQRNLGSLNIDGRLFIIGTQGGAKTEL--NITSLFAKRLTV  269 (335)
Q Consensus       204 -~~~----~~~~~~~~~~~~~d~vid~~g--~---~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~~~  269 (335)
                       ..+    ...+.+..  +..|+||.|+.  +   .  .....+..+++++.++.++...+...+.  +...+..+++++
T Consensus       258 s~~~~~~~~~~l~e~l--~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~  335 (405)
T 4dio_A          258 SGEYQVKQAALVAEHI--AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRI  335 (405)
T ss_dssp             -CHHHHHHHHHHHHHH--HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEE
T ss_pred             chhhhhhhHhHHHHHh--cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEE
Confidence             000    12334443  35899999863  1   1  1367899999999999987544332221  111222356666


Q ss_pred             EEee
Q 019790          270 QAAG  273 (335)
Q Consensus       270 ~~~~  273 (335)
                      .+..
T Consensus       336 ~gv~  339 (405)
T 4dio_A          336 VGHL  339 (405)
T ss_dssp             EECS
T ss_pred             EEeC
Confidence            6654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.67  E-value=0.00041  Score=63.01  Aligned_cols=102  Identities=15%  Similarity=0.123  Sum_probs=74.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE-e--------CCC---c--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-N--------YKT---E--  204 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~--------~~~---~--  204 (335)
                      ++.+|+|          +| .|.+|..+++.++.+|++|++.+++.++.+.++++|++.+. +        +..   .  
T Consensus       183 ~~~kV~V----------iG-~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~  251 (381)
T 3p2y_A          183 KPASALV----------LG-VGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAE  251 (381)
T ss_dssp             CCCEEEE----------ES-CSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHH
T ss_pred             CCCEEEE----------EC-chHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHH
Confidence            5678988          88 69999999999999999999999999999999998875431 0        000   0  


Q ss_pred             --cHHHHHHHHhCCCcccEEEeCCCh-----h--hHHHhhccccCCCEEEEEeccCCC
Q 019790          205 --DFVARVKEETGGKGVDVILDCMGA-----S--YFQRNLGSLNIDGRLFIIGTQGGA  253 (335)
Q Consensus       205 --~~~~~~~~~~~~~~~d~vid~~g~-----~--~~~~~~~~l~~~G~~v~~g~~~~~  253 (335)
                        .....+.+..  +.+|+||.|+..     .  .....++.+++++.++.++...+.
T Consensus       252 ~~~~~~~l~e~l--~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG  307 (381)
T 3p2y_A          252 RAQQQQALEDAI--TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGG  307 (381)
T ss_dssp             HHHHHHHHHHHH--TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTC
T ss_pred             HhhhHHHHHHHH--hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCC
Confidence              0122344444  368999998622     1  136789999999999998765543

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.56  E-value=0.00033  Score=61.49  Aligned_cols=98  Identities=18%  Similarity=0.203  Sum_probs=71.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE--EEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~  206 (335)
                      ..++++++++||.          .| +|+.|..++.+++..|++|++++.+++..+.+++    .|.+.  +...+... 
T Consensus       116 ~la~l~~g~rVLD----------IG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-  183 (298)
T 3fpf_A          116 ALGRFRRGERAVF----------IG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-  183 (298)
T ss_dssp             HHTTCCTTCEEEE----------EC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-
T ss_pred             HHcCCCCcCEEEE----------EC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-
Confidence            3468899999999          88 7877788888888889999999999998888764    34322  22222221 


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEEec
Q 019790          207 VARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  249 (335)
                            .. ...||+|+.+...    ..+..+.+.|+|+|+++....
T Consensus       184 ------l~-d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          184 ------ID-GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             ------GG-GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             ------CC-CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence                  11 3579999975543    246788999999999987753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.49  E-value=0.00096  Score=49.61  Aligned_cols=90  Identities=19%  Similarity=0.174  Sum_probs=62.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGK  217 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  217 (335)
                      +.+++|          +|+ |.+|..+++.+...| .+|+++++++++.+.+...+..... |..+   .+.+.+...  
T Consensus         5 ~~~v~I----------~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~--   68 (118)
T 3ic5_A            5 RWNICV----------VGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKD---EAGLAKALG--   68 (118)
T ss_dssp             CEEEEE----------ECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTC---HHHHHHHTT--
T ss_pred             cCeEEE----------ECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCC---HHHHHHHHc--
Confidence            467899          997 999999999999999 7999999999988887765654322 2222   234444443  


Q ss_pred             cccEEEeCCChhhHHHhhccc-cCCCEEE
Q 019790          218 GVDVILDCMGASYFQRNLGSL-NIDGRLF  245 (335)
Q Consensus       218 ~~d~vid~~g~~~~~~~~~~l-~~~G~~v  245 (335)
                      ++|+||+|++........... ..+-+++
T Consensus        69 ~~d~vi~~~~~~~~~~~~~~~~~~g~~~~   97 (118)
T 3ic5_A           69 GFDAVISAAPFFLTPIIAKAAKAAGAHYF   97 (118)
T ss_dssp             TCSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred             CCCEEEECCCchhhHHHHHHHHHhCCCEE
Confidence            699999999876544443333 3344444

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.47  E-value=0.00067  Score=59.07  Aligned_cols=103  Identities=25%  Similarity=0.422  Sum_probs=73.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHcCCCEE-E--eCCCcc----HHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVC-I--NYKTED----FVAR  209 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~g~~~~-~--~~~~~~----~~~~  209 (335)
                      -+|..+||          +||++++|.+.++.+-..|++|+++.+++++.+.+ ++++.... +  |-.+..    +.+.
T Consensus        27 L~gKvalV----------TGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           27 LNAKIAVI----------TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             TTTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred             hCCCEEEE----------eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHH
Confidence            46889999          99999999999999999999999999999887665 45664332 2  333322    2233


Q ss_pred             HHHHhCCCcccEEEeCCChh-----------h---------------HHHhhccccCCCEEEEEeccCC
Q 019790          210 VKEETGGKGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      +.+..+  ++|++++++|..           .               .+.+++.|+.+|+++.++...+
T Consensus        97 ~~~~~G--~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~  163 (273)
T 4fgs_A           97 VKAEAG--RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAG  163 (273)
T ss_dssp             HHHHHS--CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             HHHHcC--CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhh
Confidence            333333  699999988731           1               1355777888999999876554

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.40  E-value=0.00065  Score=59.19  Aligned_cols=99  Identities=19%  Similarity=0.294  Sum_probs=68.6

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCC--CEEEeCCC
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGA--DVCINYKT  203 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~--~~~~~~~~  203 (335)
                      .....+.++.+||-          .| +|. |..+..+++..  +.+|++++.+++..+.+++    .+.  ...+-.  
T Consensus       105 ~~~~~~~~~~~VLD----------iG-~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~--  170 (277)
T 1o54_A          105 AMMLDVKEGDRIID----------TG-VGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--  170 (277)
T ss_dssp             HHHTTCCTTCEEEE----------EC-CTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--
T ss_pred             HHHhCCCCCCEEEE----------EC-CcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--
Confidence            35567889999998          77 454 88888889886  5699999999988877764    242  221211  


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .++.+    ......||+|+-..+.  ..+..+.+.|+++|+++...
T Consensus       171 ~d~~~----~~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          171 RDISE----GFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             CCGGG----CCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             CCHHH----cccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            12111    1223469999987664  34678899999999998774

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.37  E-value=0.00091  Score=61.50  Aligned_cols=103  Identities=17%  Similarity=0.231  Sum_probs=76.3

Q ss_pred             HHHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCc
Q 019790          126 TVWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE  204 (335)
Q Consensus       126 ~a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~  204 (335)
                      ..+.++.+..+ .-.|.+++|          .| .|.+|..+++.++..|++|+++++++.+...+...|... .     
T Consensus       205 s~~~gi~rat~~~L~GktV~V----------iG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~-----  267 (435)
T 3gvp_A          205 SILDGLKRTTDMMFGGKQVVV----------CG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-V-----  267 (435)
T ss_dssp             HHHHHHHHHHCCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-C-----
T ss_pred             HHHHHHHHhhCceecCCEEEE----------Ee-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-c-----
Confidence            34455544443 457899999          87 899999999999999999999999887766666666532 1     


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhh-H-HHhhccccCCCEEEEEeccC
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASY-F-QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~-~-~~~~~~l~~~G~~v~~g~~~  251 (335)
                      .    +.+...  ..|+++.|.|... + ...+..|++++.++.+|...
T Consensus       268 ~----Leeal~--~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          268 K----LNEVIR--QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             C----HHHHTT--TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             c----HHHHHh--cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence            1    223332  5899999988654 3 46789999999998887654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.33  E-value=0.00055  Score=54.15  Aligned_cols=81  Identities=12%  Similarity=0.235  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHh
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEET  214 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~  214 (335)
                      ...++.+++|          .| .|.+|..+++.++..|.+|+++++++++.+.++ ..|... +..+..+ .+.+.+ .
T Consensus        15 ~~~~~~~v~I----------iG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~~-~~~l~~-~   80 (155)
T 2g1u_A           15 KKQKSKYIVI----------FG-CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFT-VVGDAAE-FETLKE-C   80 (155)
T ss_dssp             --CCCCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEE-EESCTTS-HHHHHT-T
T ss_pred             cccCCCcEEE----------EC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcE-EEecCCC-HHHHHH-c
Confidence            3456789999          88 699999999999999999999999988887766 566543 3332222 222332 2


Q ss_pred             CCCcccEEEeCCChhh
Q 019790          215 GGKGVDVILDCMGASY  230 (335)
Q Consensus       215 ~~~~~d~vid~~g~~~  230 (335)
                      +..++|+||.|++...
T Consensus        81 ~~~~ad~Vi~~~~~~~   96 (155)
T 2g1u_A           81 GMEKADMVFAFTNDDS   96 (155)
T ss_dssp             TGGGCSEEEECSSCHH
T ss_pred             CcccCCEEEEEeCCcH
Confidence            2347999999999855

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.18  E-value=0.003  Score=55.60  Aligned_cols=94  Identities=18%  Similarity=0.235  Sum_probs=71.2

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -+|.+++|          +| .|.+|.++++.++..|++|++.+++.++.+.+.++|... ++.  .    .+.+..  .
T Consensus       153 l~g~~v~I----------iG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~--~----~l~~~l--~  212 (293)
T 3d4o_A          153 IHGANVAV----------LG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHI--S----KAAQEL--R  212 (293)
T ss_dssp             STTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEG--G----GHHHHT--T
T ss_pred             CCCCEEEE----------Ee-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cCh--h----hHHHHh--c
Confidence            46789999          88 799999999999999999999999988877777777643 221  1    123333  3


Q ss_pred             cccEEEeCCChhhH-HHhhccccCCCEEEEEeccC
Q 019790          218 GVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       218 ~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~  251 (335)
                      ..|+|+.|++...+ ...+..+++++.++.++...
T Consensus       213 ~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~  247 (293)
T 3d4o_A          213 DVDVCINTIPALVVTANVLAEMPSHTFVIDLASKP  247 (293)
T ss_dssp             TCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTT
T ss_pred             CCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCC
Confidence            58999999986432 45677889999999887533

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.15  E-value=0.0034  Score=54.74  Aligned_cols=102  Identities=25%  Similarity=0.375  Sum_probs=65.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HH----HHHHcCCCEE-E--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADVC-I--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~----~~~~~g~~~~-~--~~~~~~-~~--  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++.++ .+    .+++.+.... +  |-.+.. +.  
T Consensus        28 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   97 (283)
T 1g0o_A           28 EGKVALV----------TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRM   97 (283)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHH
Confidence            4678999          9999999999999999999999999987543 22    2334454332 2  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          208 -ARVKEETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                       +.+.+..  .++|++|+++|..           .+               +.+++.|+..|+++.++....
T Consensus        98 ~~~~~~~~--g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  167 (283)
T 1g0o_A           98 FEEAVKIF--GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG  167 (283)
T ss_dssp             HHHHHHHH--SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred             HHHHHHHc--CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence             2222223  2689999998731           01               233455566799999976543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.12  E-value=0.0016  Score=56.03  Aligned_cols=102  Identities=20%  Similarity=0.295  Sum_probs=69.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EE--eCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~----~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+.+. +++... .+  |-.+..-    .+.+
T Consensus         7 ~gk~~lV----------TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            7 QGKKAIV----------IGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence            5678999          999999999999999999999999999988876664 344322 22  3333221    2223


Q ss_pred             HHHhCCCcccEEEeCCChh-----------h---------------HHHhhccccCCCEEEEEeccCC
Q 019790          211 KEETGGKGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      .+..  .++|++++++|..           .               .+.+++.++++|+++.++....
T Consensus        77 ~~~~--g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~  142 (255)
T 4eso_A           77 GQTL--GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD  142 (255)
T ss_dssp             HHHH--SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             HHHh--CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh
Confidence            3333  3699999988631           0               1234556667899999876553

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.11  E-value=0.0031  Score=52.64  Aligned_cols=99  Identities=9%  Similarity=0.028  Sum_probs=65.4

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHh-hCCCeEEEEecChh-hHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCC
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEE-KLAVCKDLGADV-CINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~-~~g~~V~~~~~~~~-~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .++||          +|++|.+|.++++.+. ..|++|++++|+++ +.+.+...+... .+..+-.+ .+.+.+...  
T Consensus         6 k~vlV----------tGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--   72 (221)
T 3r6d_A            6 XYITI----------LGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN-PGXLEQAVT--   72 (221)
T ss_dssp             SEEEE----------ESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC-HHHHHHHHT--
T ss_pred             EEEEE----------EeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC-HHHHHHHHc--
Confidence            35899          9999999999999888 88999999999988 665553223222 22222222 234444443  


Q ss_pred             cccEEEeCCChhh--HHHhhccccC--CCEEEEEeccCC
Q 019790          218 GVDVILDCMGASY--FQRNLGSLNI--DGRLFIIGTQGG  252 (335)
Q Consensus       218 ~~d~vid~~g~~~--~~~~~~~l~~--~G~~v~~g~~~~  252 (335)
                      ++|++|.++|...  ...+++.++.  .++++.++....
T Consensus        73 ~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           73 NAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            6899999998622  3344454543  368988876553

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.08  E-value=0.0059  Score=49.43  Aligned_cols=94  Identities=20%  Similarity=0.136  Sum_probs=66.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGK  217 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~  217 (335)
                      +++++|          .| .|.+|..+++.++.. |.+|+++++++++.+.+++.|...+. |..+.   +.+.+.++-.
T Consensus        39 ~~~v~I----------iG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~---~~l~~~~~~~  104 (183)
T 3c85_A           39 HAQVLI----------LG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDP---DFWERILDTG  104 (183)
T ss_dssp             TCSEEE----------EC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCH---HHHHTBCSCC
T ss_pred             CCcEEE----------EC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCH---HHHHhccCCC
Confidence            567888          87 799999999999999 99999999999999888888876543 22222   2233331345


Q ss_pred             cccEEEeCCChhh-HH---HhhccccCCCEEEEE
Q 019790          218 GVDVILDCMGASY-FQ---RNLGSLNIDGRLFII  247 (335)
Q Consensus       218 ~~d~vid~~g~~~-~~---~~~~~l~~~G~~v~~  247 (335)
                      ++|+++.|+++.. ..   ...+.+.+..+++..
T Consensus       105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            7999999998754 22   234445556677654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.07  E-value=0.006  Score=47.17  Aligned_cols=89  Identities=9%  Similarity=0.070  Sum_probs=63.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF----  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~----  231 (335)
                      .| .|.+|..+++.++..|.+|+++++++++.+.+++.|...+. .+..+ .+.+ +..+-..+|.++.+++....    
T Consensus        13 iG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~-gd~~~-~~~l-~~a~i~~ad~vi~~~~~~~~n~~~   88 (140)
T 3fwz_A           13 VG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVL-GNAAN-EEIM-QLAHLECAKWLILTIPNGYEAGEI   88 (140)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-SCTTS-HHHH-HHTTGGGCSEEEECCSCHHHHHHH
T ss_pred             EC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEE-CCCCC-HHHH-HhcCcccCCEEEEECCChHHHHHH
Confidence            77 79999999999999999999999999999999888875543 22222 1222 22334578999999997542    


Q ss_pred             HHhhccccCCCEEEEEe
Q 019790          232 QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g  248 (335)
                      ....+.+.+..+++...
T Consensus        89 ~~~a~~~~~~~~iiar~  105 (140)
T 3fwz_A           89 VASARAKNPDIEIIARA  105 (140)
T ss_dssp             HHHHHHHCSSSEEEEEE
T ss_pred             HHHHHHHCCCCeEEEEE
Confidence            23345566677776543

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.07  E-value=0.0051  Score=56.67  Aligned_cols=119  Identities=17%  Similarity=0.142  Sum_probs=82.5

Q ss_pred             HHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          128 WSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       128 ~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      +.++.+... .-.|.++.|          .| .|.+|..+++.++..|++|+++++++.+...+...|....      + 
T Consensus       198 ldgi~ratg~~L~GktVgI----------iG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------s-  259 (436)
T 3h9u_A          198 VDGIKRATDVMIAGKTACV----------CG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------L-  259 (436)
T ss_dssp             HHHHHHHHCCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------C-
T ss_pred             HHHHHHhcCCcccCCEEEE----------Ee-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------C-
Confidence            444433333 346888988          77 8999999999999999999999998877776766775321      1 


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh-H-HHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEe
Q 019790          207 VARVKEETGGKGVDVILDCMGASY-F-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA  272 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  272 (335)
                         +.+...  ..|+++.+.+... + ...+..|+++..++.+|..   ...++...+..+..++.+.
T Consensus       260 ---L~eal~--~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg---~vEID~~~L~~~~~~~~~i  319 (436)
T 3h9u_A          260 ---VEDVVE--EAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHF---DTEIQVAWLKANAKERVEV  319 (436)
T ss_dssp             ---HHHHTT--TCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSS---GGGBCHHHHHHHCSEEEEE
T ss_pred             ---HHHHHh--hCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCC---CCccCHHHHHhhcCceEee
Confidence               233332  5899999888754 2 4578889999888887633   2356666665544444433

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.00  E-value=0.0036  Score=55.24  Aligned_cols=94  Identities=20%  Similarity=0.245  Sum_probs=71.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -++.+++|          +| .|.+|..+++.++..|++|++.+++.++.+.+.++|.. .++.  .    .+.+..  +
T Consensus       155 l~g~~v~I----------iG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~----~l~~~l--~  214 (300)
T 2rir_A          155 IHGSQVAV----------LG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHT--D----ELKEHV--K  214 (300)
T ss_dssp             STTSEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEG--G----GHHHHS--T
T ss_pred             CCCCEEEE----------Ec-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEch--h----hHHHHh--h
Confidence            46789999          88 79999999999999999999999998877777677753 2222  1    233333  3


Q ss_pred             cccEEEeCCChhhH-HHhhccccCCCEEEEEeccC
Q 019790          218 GVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       218 ~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~~~  251 (335)
                      ..|+|+.+++...+ ...+..+++++.++.++...
T Consensus       215 ~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a~g~  249 (300)
T 2rir_A          215 DIDICINTIPSMILNQTVLSSMTPKTLILDLASRP  249 (300)
T ss_dssp             TCSEEEECCSSCCBCHHHHTTSCTTCEEEECSSTT
T ss_pred             CCCEEEECCChhhhCHHHHHhCCCCCEEEEEeCCC
Confidence            58999999987443 44678899999999887543

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.95  E-value=0.0046  Score=52.69  Aligned_cols=80  Identities=25%  Similarity=0.375  Sum_probs=55.9

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCccHHHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTEDFVARVKE  212 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~~~~~~~~  212 (335)
                      -.++.++||          +||++.+|.+++..+...|++|++++++.++.+.+. ++.....+   |..+......+.+
T Consensus        11 ~~~~k~vlV----------TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A           11 DLTGKTSLI----------TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             CCTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHH
Confidence            356789999          999999999999999999999999999988877664 34433322   2222222222222


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ..  .++|++|.++|.
T Consensus        81 ~~--~~id~li~~Ag~   94 (249)
T 3f9i_A           81 KT--SNLDILVCNAGI   94 (249)
T ss_dssp             TC--SCCSEEEECCC-
T ss_pred             hc--CCCCEEEECCCC
Confidence            22  369999999873

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.93  E-value=0.0053  Score=52.52  Aligned_cols=75  Identities=20%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-E--eCCCcc----HHHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-I--NYKTED----FVARVKEE  213 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~--~~~~~~----~~~~~~~~  213 (335)
                      .++||          +||++++|.+.++.+-..|++|+++.+++++.+.+.+.+.... +  |-.+..    +.+.+.+.
T Consensus         3 K~vlV----------TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   72 (247)
T 3ged_A            3 RGVIV----------TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK   72 (247)
T ss_dssp             CEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence            57899          9999999999999999999999999999988887765544332 2  333322    22233333


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .  +++|++++++|
T Consensus        73 ~--g~iDiLVNNAG   84 (247)
T 3ged_A           73 L--QRIDVLVNNAC   84 (247)
T ss_dssp             H--SCCCEEEECCC
T ss_pred             c--CCCCEEEECCC
Confidence            3  36999999886

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.93  E-value=0.0021  Score=54.99  Aligned_cols=76  Identities=21%  Similarity=0.352  Sum_probs=54.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh--hhHHHHHHcCCCEEE---eCCCccHHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCKDLGADVCI---NYKTEDFVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~  213 (335)
                      .|..+||          +||++++|.+.++.+-..|++|+++.+++  +..+.+++.|.....   |-.+..   .+++.
T Consensus         8 ~GKvalV----------TGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~   74 (247)
T 4hp8_A            8 EGRKALV----------TGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPL---AAKDS   74 (247)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT---TTTTS
T ss_pred             CCCEEEE----------eCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH---HHHHH
Confidence            5788999          99999999999999999999999999874  345556666654432   222222   22222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      ....++|++++++|
T Consensus        75 ~~~g~iDiLVNNAG   88 (247)
T 4hp8_A           75 FTDAGFDILVNNAG   88 (247)
T ss_dssp             STTTCCCEEEECCC
T ss_pred             HHhCCCCEEEECCC
Confidence            33357999999987

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.93  E-value=0.0025  Score=53.86  Aligned_cols=97  Identities=16%  Similarity=0.271  Sum_probs=67.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CEEE-eCCCccHHHHHHHHhCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCI-NYKTEDFVARVKEETGG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~~~-~~~~~~~~~~~~~~~~~  216 (335)
                      .+.++||          +|++|.+|..++..+...|++|++++|++++.+.+...+. ..+. |..     +.+.+... 
T Consensus        20 ~~~~ilV----------tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~-   83 (236)
T 3e8x_A           20 QGMRVLV----------VGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE-----EDFSHAFA-   83 (236)
T ss_dssp             -CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-----SCCGGGGT-
T ss_pred             CCCeEEE----------ECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH-----HHHHHHHc-
Confidence            4678999          9999999999999999999999999999998887776665 3322 222     23333333 


Q ss_pred             CcccEEEeCCChhh--------------HHHhhcccc--CCCEEEEEeccCC
Q 019790          217 KGVDVILDCMGASY--------------FQRNLGSLN--IDGRLFIIGTQGG  252 (335)
Q Consensus       217 ~~~d~vid~~g~~~--------------~~~~~~~l~--~~G~~v~~g~~~~  252 (335)
                       ++|++|.++|...              ....++.++  ..++++.++....
T Consensus        84 -~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           84 -SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             -TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             -CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence             6999999998421              112233332  2478998877554

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.92  E-value=0.01  Score=50.26  Aligned_cols=78  Identities=21%  Similarity=0.290  Sum_probs=54.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhC-C
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETG-G  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~  216 (335)
                      ++.++||          +|++|.+|.++++.+...|++|+++++++++.+.+. +......+..+-.+. +.+.+... .
T Consensus         6 ~~k~vlI----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~   74 (244)
T 3d3w_A            6 AGRRVLV----------TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSV   74 (244)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC
T ss_pred             CCcEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-HHHHHHHHHc
Confidence            4678999          999999999999999999999999999987766554 332223332222222 23333332 2


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                      .++|++|+++|
T Consensus        75 ~~id~vi~~Ag   85 (244)
T 3d3w_A           75 GPVDLLVNNAA   85 (244)
T ss_dssp             CCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            36899999987

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.92  E-value=0.0069  Score=52.24  Aligned_cols=78  Identities=24%  Similarity=0.350  Sum_probs=53.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EE--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~-~---~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +++... .+  |-.+.+ +   .+.+
T Consensus         5 ~~k~vlI----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            5 SGKTILV----------TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988776654 343222 22  333322 1   1222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|++|+++|.
T Consensus        75 ~~~~--g~iD~lvnnAg~   90 (263)
T 2a4k_A           75 LEEF--GRLHGVAHFAGV   90 (263)
T ss_dssp             HHHH--SCCCEEEEGGGG
T ss_pred             HHHc--CCCcEEEECCCC
Confidence            2222  268999998873

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.91  E-value=0.01  Score=51.35  Aligned_cols=102  Identities=21%  Similarity=0.293  Sum_probs=66.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHH----HHHcCCCEE-E--eCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGADVC-I--NYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~----~~~~g~~~~-~--~~~~~~-~--  206 (335)
                      -.+.++||          +|+++.+|.++++.+...|++|+++.++ .+..+.    +++.+.... +  |-.+.. +  
T Consensus        16 l~~k~~lV----------TGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   85 (270)
T 3is3_A           16 LDGKVALV----------TGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVK   85 (270)
T ss_dssp             CTTCEEEE----------SCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            35678999          9999999999999999999999997654 443333    234454332 2  333322 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCChh-----------h---------------HHHhhccccCCCEEEEEeccC
Q 019790          207 -VARVKEETGGKGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~  251 (335)
                       .+.+.+..+  ++|++++++|..           .               .+.+++.+.++|+++.++...
T Consensus        86 ~~~~~~~~~g--~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           86 LFDQAVAHFG--HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             HHHHHHHHHS--CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             HHHHHHHHcC--CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence             222333332  689999988731           0               124456677799999997755

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.87  E-value=0.0051  Score=56.71  Aligned_cols=102  Identities=16%  Similarity=0.122  Sum_probs=74.8

Q ss_pred             HHHHHHHhc-CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          127 VWSTVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       127 a~~~l~~~~-~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      .+.++.+.. ..-.|.+++|          .| .|.+|..+++.++..|++|+++.+++.+...+...|... .+     
T Consensus       233 lvdgI~Ratg~~L~GKTVgV----------IG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~-----  295 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVV----------CG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VT-----  295 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CC-----
T ss_pred             HHHHHHHhcCCcccCCEEEE----------EC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-cc-----
Confidence            344444433 3467889999          87 899999999999999999999998887665555566532 21     


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChhhH--HHhhccccCCCEEEEEeccC
Q 019790          206 FVARVKEETGGKGVDVILDCMGASYF--QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +    .+..  ...|+|+.|.++..+  ...+..|++++.++.+|...
T Consensus       296 L----eElL--~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          296 L----DDAA--STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             H----HHHG--GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             H----HHHH--hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            2    2222  258999999987643  57789999999999887654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=96.86  E-value=0.004  Score=58.28  Aligned_cols=100  Identities=15%  Similarity=0.152  Sum_probs=73.5

Q ss_pred             HHHHHHhcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH
Q 019790          128 WSTVFMTSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF  206 (335)
Q Consensus       128 ~~~l~~~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  206 (335)
                      +.++.+..+. -.|.+++|          .| .|.+|.++++.++..|++|+++++++.+...+...+.+ +.+.     
T Consensus       252 ~dgi~r~tg~~L~GKtVvV----------tG-aGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~l-----  314 (488)
T 3ond_A          252 PDGLMRATDVMIAGKVAVV----------AG-YGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTL-----  314 (488)
T ss_dssp             HHHHHHHHCCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCG-----
T ss_pred             HHHHHHHcCCcccCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCH-----
Confidence            3344444443 57889999          88 57999999999999999999999998887777776653 2211     


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh-H-HHhhccccCCCEEEEEecc
Q 019790          207 VARVKEETGGKGVDVILDCMGASY-F-QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~-~-~~~~~~l~~~G~~v~~g~~  250 (335)
                          .+.  ...+|+++++.|... + ...+..+++++.++.+|..
T Consensus       315 ----ee~--~~~aDvVi~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          315 ----EDV--VSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ----GGT--TTTCSEEEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             ----HHH--HHhcCEEEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence                111  135899999998754 3 4578889999988888754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.84  E-value=0.01  Score=51.56  Aligned_cols=101  Identities=18%  Similarity=0.254  Sum_probs=65.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC------------hhhHHHH----HHcCCCEEE---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADVCI---  199 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~----~~~g~~~~~---  199 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++            .++.+.+    +..+....+   
T Consensus         9 ~gk~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (287)
T 3pxx_A            9 QDKVVLV----------TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEV   78 (287)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEEC
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEc
Confidence            4678999          9999999999999999999999999876            4443333    234433322   


Q ss_pred             eCCCcc-H---HHHHHHHhCCCcccEEEeCCChh---------hH---------------HHhhccccCCCEEEEEeccC
Q 019790          200 NYKTED-F---VARVKEETGGKGVDVILDCMGAS---------YF---------------QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~-~---~~~~~~~~~~~~~d~vid~~g~~---------~~---------------~~~~~~l~~~G~~v~~g~~~  251 (335)
                      |-.+.. +   .+.+.+..  .++|++++++|..         .+               +.++..+..+|+++.++...
T Consensus        79 D~~~~~~v~~~~~~~~~~~--g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  156 (287)
T 3pxx_A           79 DVRDRAAVSRELANAVAEF--GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA  156 (287)
T ss_dssp             CTTCHHHHHHHHHHHHHHH--SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred             cCCCHHHHHHHHHHHHHHc--CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence            333322 1   22233333  2699999988731         11               23456667789999887543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.76  E-value=0.0059  Score=52.52  Aligned_cols=77  Identities=21%  Similarity=0.189  Sum_probs=51.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhh-CCCeEEEEecChhhHHHHH----HcCCC-EEE--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~~V~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~-~~--  207 (335)
                      ++.++||          +||+|.+|..++..+.. .|++|++++++.++.+.+.    ..+.. ..+  |-.+.. +.  
T Consensus         3 ~~k~vlI----------TGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   72 (276)
T 1wma_A            3 GIHVALV----------TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRAL   72 (276)
T ss_dssp             CCCEEEE----------SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHH
Confidence            4678999          99999999999988888 8999999999877654432    22322 222  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCC
Q 019790          208 -ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+..  .++|++|.++|
T Consensus        73 ~~~~~~~~--g~id~li~~Ag   91 (276)
T 1wma_A           73 RDFLRKEY--GGLDVLVNNAG   91 (276)
T ss_dssp             HHHHHHHH--SSEEEEEECCC
T ss_pred             HHHHHHhc--CCCCEEEECCc
Confidence             2222222  26999999887

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.76  E-value=0.0077  Score=51.83  Aligned_cols=102  Identities=17%  Similarity=0.220  Sum_probs=65.8

Q ss_pred             CCCEEEEeeccccccccccccch--HHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--CEE--EeCCCccH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSG--IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DVC--INYKTEDF--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~--~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~~~--~~~~~~~~--  206 (335)
                      .+.++||          +|++|.  +|.++++.+...|++|+++.+++...+.+.+    .+.  -..  .|-.+...  
T Consensus         6 ~~k~vlV----------TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   75 (266)
T 3oig_A            6 EGRNIVV----------MGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIE   75 (266)
T ss_dssp             TTCEEEE----------ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHH
T ss_pred             CCCEEEE----------EcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHH
Confidence            4678999          999955  9999999999999999999988754444432    332  122  23333322  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCChh------------------------------hHHHhhccccCCCEEEEEeccCC
Q 019790          207 --VARVKEETGGKGVDVILDCMGAS------------------------------YFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                        .+.+.+..  .++|+++.++|..                              ..+.++..++++|+++.++....
T Consensus        76 ~~~~~~~~~~--g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~  151 (266)
T 3oig_A           76 TCFASIKEQV--GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG  151 (266)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             HHHHHHHHHh--CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence              22233333  2689999988631                              01234566677899999876553

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.76  E-value=0.0087  Score=49.59  Aligned_cols=92  Identities=16%  Similarity=0.258  Sum_probs=62.8

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCccc
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      +|||          +|++|.+|..+++.+...|.+|++++|++++.+.+. .+...+ .|..+...     +..  .++|
T Consensus         2 kvlV----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-----~~~--~~~d   63 (221)
T 3ew7_A            2 KIGI----------IGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-----SDL--SDQN   63 (221)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-----HHH--TTCS
T ss_pred             eEEE----------EcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-----hhh--cCCC
Confidence            5889          999999999999999999999999999987766553 233222 22222222     222  3689


Q ss_pred             EEEeCCChh---------hHHHhhccccC--CCEEEEEeccC
Q 019790          221 VILDCMGAS---------YFQRNLGSLNI--DGRLFIIGTQG  251 (335)
Q Consensus       221 ~vid~~g~~---------~~~~~~~~l~~--~G~~v~~g~~~  251 (335)
                      +||.|+|..         .....++.++.  .++++.++...
T Consensus        64 ~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~  105 (221)
T 3ew7_A           64 VVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA  105 (221)
T ss_dssp             EEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred             EEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence            999999752         12345555544  47888886543

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.75  E-value=0.01  Score=52.02  Aligned_cols=101  Identities=16%  Similarity=0.241  Sum_probs=65.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HHHH----HHcCCCEE-E--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVC----KDLGADVC-I--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~----~~~g~~~~-~--~~~~~~-~---  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++.++.+. .+.+    ++.+.... +  |-.+.. +   
T Consensus        46 ~gk~vlV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  115 (291)
T 3ijr_A           46 KGKNVLI----------TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDI  115 (291)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            5678999          9999999999999999999999999987653 2222    23444332 2  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh------------h---------------HHHhhccccCCCEEEEEeccC
Q 019790          207 VARVKEETGGKGVDVILDCMGAS------------Y---------------FQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      .+.+.+..  .++|++|+++|..            .               .+.++..++.+|+++.++...
T Consensus       116 ~~~~~~~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~  185 (291)
T 3ijr_A          116 VQETVRQL--GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIV  185 (291)
T ss_dssp             HHHHHHHH--SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTH
T ss_pred             HHHHHHHc--CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechH
Confidence            22333333  2699999987621            0               123456677789999886543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.74  E-value=0.01  Score=50.95  Aligned_cols=77  Identities=23%  Similarity=0.314  Sum_probs=55.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEEE---eCCCcc----HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI---NYKTED----FV  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~~---~~~~~~----~~  207 (335)
                      +|..+||          +||++++|.+.++.+-..|++|+++.+++++.+.+    ++.|.....   |-.+.+    +.
T Consensus         6 ~gKvalV----------TGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~   75 (254)
T 4fn4_A            6 KNKVVIV----------TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFV   75 (254)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4778999          99999999999999999999999999998876554    345554332   333322    22


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++++++|
T Consensus        76 ~~~~~~~G--~iDiLVNNAG   93 (254)
T 4fn4_A           76 RRTFETYS--RIDVLCNNAG   93 (254)
T ss_dssp             HHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHcC--CCCEEEECCc
Confidence            33333333  6999999887

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.73  E-value=0.0057  Score=52.18  Aligned_cols=77  Identities=22%  Similarity=0.392  Sum_probs=55.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCcc----HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +++.....   |-.+..    +.+.+
T Consensus         5 ~gk~vlV----------TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   74 (247)
T 3rwb_A            5 AGKTALV----------TGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEI   74 (247)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988776654 45544332   222221    12233


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++++++|
T Consensus        75 ~~~~g--~id~lv~nAg   89 (247)
T 3rwb_A           75 QALTG--GIDILVNNAS   89 (247)
T ss_dssp             HHHHS--CCSEEEECCC
T ss_pred             HHHCC--CCCEEEECCC
Confidence            33333  6999999988

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.72  E-value=0.0063  Score=53.23  Aligned_cols=77  Identities=18%  Similarity=0.351  Sum_probs=55.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE---EeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC---INYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~---~~~~~~~~~~~~~~~~  214 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.+ ++....   .|-.+..-.+.+.+..
T Consensus        15 ~gk~vlV----------TGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           15 AQRTVVI----------TGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             TTCEEEE----------ECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc
Confidence            5678999          9999999999999999999999999999888776653 433221   2333322223333333


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                        .++|++|+++|
T Consensus        85 --~~iD~lv~nAg   95 (291)
T 3rd5_A           85 --SGADVLINNAG   95 (291)
T ss_dssp             --CCEEEEEECCC
T ss_pred             --CCCCEEEECCc
Confidence              36899999987

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.69  E-value=0.0096  Score=50.16  Aligned_cols=77  Identities=23%  Similarity=0.302  Sum_probs=52.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-----HcCCCEEE---eCCCccHH----
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADVCI---NYKTEDFV----  207 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-----~~g~~~~~---~~~~~~~~----  207 (335)
                      +.++||          +||++.+|.++++.+...|++|++++++.++.+.+.     ..+....+   |-.+..-.    
T Consensus         2 ~k~vlI----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   71 (235)
T 3l77_A            2 MKVAVI----------TGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFS   71 (235)
T ss_dssp             CCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHC
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHH
Confidence            567899          999999999999999999999999999987765542     23433322   32222211    


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  .++|++|+++|.
T Consensus        72 ~~~~~~~--g~id~li~~Ag~   90 (235)
T 3l77_A           72 KKVLERF--GDVDVVVANAGL   90 (235)
T ss_dssp             C-HHHHH--SSCSEEEECCCC
T ss_pred             HHHHHhc--CCCCEEEECCcc
Confidence            1222222  269999999873

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.69  E-value=0.016  Score=50.20  Aligned_cols=101  Identities=24%  Similarity=0.412  Sum_probs=65.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHH----HHcCCCEE-E--eCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADVC-I--NYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~----~~~g~~~~-~--~~~~~~-~--  206 (335)
                      -.+.++||          +||++.+|.++++.+...|++|+++.++ .++.+.+    ++.+.... +  |-.+.. +  
T Consensus        29 l~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~   98 (271)
T 3v2g_A           29 LAGKTAFV----------TGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQ   98 (271)
T ss_dssp             CTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            35778999          9999999999999999999999998654 3433332    33454332 2  333322 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCChh-----------h---------------HHHhhccccCCCEEEEEecc
Q 019790          207 -VARVKEETGGKGVDVILDCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~  250 (335)
                       .+.+.+..+  ++|++++++|..           .               .+.+.+.++.+|+++.++..
T Consensus        99 ~~~~~~~~~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A           99 AIRETVEALG--GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             HHHHHHHHcC--CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence             222333332  699999998731           0               12345567778999998664

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.68  E-value=0.0036  Score=52.48  Aligned_cols=89  Identities=18%  Similarity=0.197  Sum_probs=61.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.++.+             .|-.+....+.+.+..  .+
T Consensus         5 ~~k~vlV----------TGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------~D~~~~~~v~~~~~~~--g~   59 (223)
T 3uce_A            5 DKTVYVV----------LGGTSGIGAELAKQLESEHTIVHVASRQTG-------------LDISDEKSVYHYFETI--GA   59 (223)
T ss_dssp             CCEEEEE----------ETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------CCTTCHHHHHHHHHHH--CS
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------cCCCCHHHHHHHHHHh--CC
Confidence            3568899          999999999999999989999999998754             2333333223333333  36


Q ss_pred             ccEEEeCCChh---------------------------hHHHhhccccCCCEEEEEeccCC
Q 019790          219 VDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       219 ~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      +|++++++|..                           ..+.+.+.++++|+++.++....
T Consensus        60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  120 (223)
T 3uce_A           60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS  120 (223)
T ss_dssp             EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence            89999988731                           01234556667899999876543

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.66  E-value=0.021  Score=48.20  Aligned_cols=78  Identities=18%  Similarity=0.221  Sum_probs=54.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhC-C
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETG-G  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~  216 (335)
                      ++.++||          +|++|.+|..+++.+...|++|+++++++++.+.+.+ ......+..+-.+ .+.+.+... .
T Consensus         6 ~~~~vlV----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~   74 (244)
T 1cyd_A            6 SGLRALV----------TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGD-WDATEKALGGI   74 (244)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHTTC
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCC-HHHHHHHHHHc
Confidence            4678999          9999999999999999999999999999877665543 2222333222222 223333332 2


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                      .++|++|+++|
T Consensus        75 ~~id~vi~~Ag   85 (244)
T 1cyd_A           75 GPVDLLVNNAA   85 (244)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            36899999987

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.64  E-value=0.0043  Score=53.64  Aligned_cols=79  Identities=24%  Similarity=0.398  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccc--cchHHHHHHHHHhhCCCeEEEEecChhh-HHHHH-HcCCC--E-EEeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCK-DLGAD--V-CINYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~--~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~-~~g~~--~-~~~~~~~~~----~  207 (335)
                      .+.++||          +|+  ++.+|.++++.+...|++|+++++++++ .+.+. +++..  . ..|-.+...    .
T Consensus         6 ~~k~vlV----------TGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            6 DGKRILV----------SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             TTCEEEE----------CCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence            4678999          998  8999999999999999999999988765 34443 34322  1 124333222    1


Q ss_pred             HHHHHHhC-CCcccEEEeCCC
Q 019790          208 ARVKEETG-GKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~-~~~~d~vid~~g  227 (335)
                      +.+.+..+ +.++|++|+++|
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg   96 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIG   96 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCC
T ss_pred             HHHHHHhCCCCCceEEEECCc
Confidence            22222232 126999999887

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.62  E-value=0.012  Score=50.63  Aligned_cols=102  Identities=22%  Similarity=0.309  Sum_probs=68.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEEE---eCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI---NYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~~---~~~~~~-~~---  207 (335)
                      .|..+||          +||++++|.+.++.+-..|++|+++.+++++.+..    ++.|.+...   |-.+.+ ..   
T Consensus         8 ~gKvalV----------TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~   77 (255)
T 4g81_D            8 TGKTALV----------TGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAF   77 (255)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            5788999          99999999999999999999999999998876544    344544432   222222 22   


Q ss_pred             HHHHHHhCCCcccEEEeCCChh-----------hH---------------HHhhccc---cCCCEEEEEeccCC
Q 019790          208 ARVKEETGGKGVDVILDCMGAS-----------YF---------------QRNLGSL---NIDGRLFIIGTQGG  252 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l---~~~G~~v~~g~~~~  252 (335)
                      +.+.+..  +++|++++++|..           .+               +.+++.|   ..+|+|+.++....
T Consensus        78 ~~~~~~~--G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           78 SKLDAEG--IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             HHHHHTT--CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             HHHHHHC--CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            2222222  3699999998731           11               2345555   24689999976654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.62  E-value=0.028  Score=49.26  Aligned_cols=102  Identities=17%  Similarity=0.190  Sum_probs=66.9

Q ss_pred             CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~----  206 (335)
                      .+.++||          +|++|  .+|.++++.+...|++|+++.++++..+.+.    +.+....+  |-.+...    
T Consensus        29 ~~k~vlV----------TGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   98 (296)
T 3k31_A           29 EGKKGVI----------IGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNM   98 (296)
T ss_dssp             TTCEEEE----------ECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------EeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHH
Confidence            5678999          99886  9999999999999999999999875444332    33433333  3333222    


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh---------------h---------------HHHhhccccCCCEEEEEeccCC
Q 019790          207 VARVKEETGGKGVDVILDCMGAS---------------Y---------------FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      .+.+.+..+  ++|++|+++|..               .               .+.++..+..+|+++.++....
T Consensus        99 ~~~~~~~~g--~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~  172 (296)
T 3k31_A           99 FKVLAEEWG--SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA  172 (296)
T ss_dssp             HHHHHHHHS--CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred             HHHHHHHcC--CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence            222233332  699999998731               0               1234556667899999876543

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.62  E-value=0.018  Score=49.34  Aligned_cols=102  Identities=12%  Similarity=0.203  Sum_probs=67.2

Q ss_pred             CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC--CEEE--eCCCcc---
Q 019790          139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--DVCI--NYKTED---  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~--~~~~--~~~~~~---  205 (335)
                      .|.++||          +|++|  ++|.+.++.+-..|++|+++.++++..+.+.    +.+.  ...+  |-.+.+   
T Consensus         5 ~gK~alV----------TGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   74 (256)
T 4fs3_A            5 ENKTYVI----------MGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVI   74 (256)
T ss_dssp             TTCEEEE----------ECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHH
T ss_pred             CCCEEEE----------ECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHH
Confidence            5788999          99765  8999999999999999999999987766554    2332  2222  333322   


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCChh---------------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          206 -FVARVKEETGGKGVDVILDCMGAS---------------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                       ..+.+.+..+  ++|++++++|..               .+               ......++.+|+|+.+++..+
T Consensus        75 ~~~~~~~~~~G--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~  150 (256)
T 4fs3_A           75 NGFEQIGKDVG--NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG  150 (256)
T ss_dssp             HHHHHHHHHHC--CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred             HHHHHHHHHhC--CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence             1233333443  699999988621               01               123455677899999876654

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.62  E-value=0.0069  Score=52.00  Aligned_cols=78  Identities=21%  Similarity=0.366  Sum_probs=54.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~---~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++.++.+.+. +++.... +  |-.+.+ +   .+.+
T Consensus         7 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            7 EGKSALI----------TGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988766554 4443322 2  333322 1   2222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|++++++|.
T Consensus        77 ~~~~--g~id~lv~~Ag~   92 (259)
T 4e6p_A           77 VEHA--GGLDILVNNAAL   92 (259)
T ss_dssp             HHHS--SSCCEEEECCCC
T ss_pred             HHHc--CCCCEEEECCCc
Confidence            2332  269999999873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.62  E-value=0.01  Score=51.18  Aligned_cols=78  Identities=22%  Similarity=0.332  Sum_probs=52.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~-~~-  207 (335)
                      .+.++||          +|++|.+|.++++.+...|++|+++++++++.+.+. ++     +.. ..+  |-.+.. +. 
T Consensus         6 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~   75 (267)
T 2gdz_A            6 NGKVALV----------TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRD   75 (267)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEE----------ECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHH
Confidence            4678999          999999999999999999999999999887655432 22     111 122  333322 21 


Q ss_pred             --HHHHHHhCCCcccEEEeCCCh
Q 019790          208 --ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g~  228 (335)
                        +.+.+..  .++|++++++|.
T Consensus        76 ~~~~~~~~~--g~id~lv~~Ag~   96 (267)
T 2gdz_A           76 TFRKVVDHF--GRLDILVNNAGV   96 (267)
T ss_dssp             HHHHHHHHH--SCCCEEEECCCC
T ss_pred             HHHHHHHHc--CCCCEEEECCCC
Confidence              2222222  268999999973

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.61  E-value=0.023  Score=49.73  Aligned_cols=102  Identities=23%  Similarity=0.328  Sum_probs=66.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh--hhHHHH----HHcCCCEEE---eCCCccH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC----KDLGADVCI---NYKTEDF---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~----~~~g~~~~~---~~~~~~~---  206 (335)
                      .+.++||          +||++.+|.+++..+...|++|+++.++.  +..+.+    ++.+....+   |-.+...   
T Consensus        48 ~~k~vlV----------TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  117 (294)
T 3r3s_A           48 KDRKALV----------TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARS  117 (294)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHH
Confidence            5678999          99999999999999999999999998762  222222    334544332   2222221   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCChh---------------------------hHHHhhccccCCCEEEEEeccCC
Q 019790          207 -VARVKEETGGKGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                       .+.+.+..+  ++|++++++|..                           ..+.++..+.++|+++.++....
T Consensus       118 ~~~~~~~~~g--~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~  189 (294)
T 3r3s_A          118 LVHKAREALG--GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA  189 (294)
T ss_dssp             HHHHHHHHHT--CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG
T ss_pred             HHHHHHHHcC--CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh
Confidence             223333333  699999988731                           01234566777899999876553

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.61  E-value=0.0071  Score=51.86  Aligned_cols=77  Identities=19%  Similarity=0.330  Sum_probs=54.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~---~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +++.... +  |-.+.. +   .+.+
T Consensus         8 ~~k~vlI----------TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (261)
T 3n74_A            8 EGKVALI----------TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAA   77 (261)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988876654 4544332 2  333322 1   2223


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++|+++|
T Consensus        78 ~~~~g--~id~li~~Ag   92 (261)
T 3n74_A           78 LSKFG--KVDILVNNAG   92 (261)
T ss_dssp             HHHHS--CCCEEEECCC
T ss_pred             HHhcC--CCCEEEECCc
Confidence            33332  6899999887

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.60  E-value=0.015  Score=48.01  Aligned_cols=98  Identities=12%  Similarity=0.129  Sum_probs=67.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~  205 (335)
                      ....+.++++||-          .| +|. |..++.+++. +.+|++++.+++..+.+++    .+..   .++..+...
T Consensus        49 ~~l~~~~~~~vLD----------lG-cG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~  115 (204)
T 3njr_A           49 AALAPRRGELLWD----------IG-GGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA  115 (204)
T ss_dssp             HHHCCCTTCEEEE----------ET-CTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred             HhcCCCCCCEEEE----------ec-CCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence            4557788999988          77 454 8888888888 8999999999998877754    3433   223322222


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh--hHHHhhccccCCCEEEEEec
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .   +   .....||+|+...+..  .+..+.+.|+++|+++....
T Consensus       116 ~---~---~~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          116 A---L---ADLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             G---G---TTSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             h---c---ccCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence            1   1   1123699999765432  45778899999999987653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.59  E-value=0.0095  Score=51.46  Aligned_cols=78  Identities=29%  Similarity=0.451  Sum_probs=55.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~~----~~~~  210 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++.+++++.+.+. +++....+   |-.+...    .+.+
T Consensus        26 ~gk~vlV----------TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           26 TGRKALV----------TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHH
Confidence            5678999          999999999999999999999999999988776653 45544322   3333221    1222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|++++++|.
T Consensus        96 ~~~~--g~iD~lvnnAg~  111 (266)
T 3grp_A           96 EREM--EGIDILVNNAGI  111 (266)
T ss_dssp             HHHH--TSCCEEEECCCC
T ss_pred             HHHc--CCCCEEEECCCC
Confidence            2222  269999999873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.57  E-value=0.0095  Score=50.67  Aligned_cols=77  Identities=19%  Similarity=0.287  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCccHHHHHHHHhCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~  216 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.++..-..+  |-.+....+.+.+..  
T Consensus         5 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--   72 (246)
T 2ag5_A            5 DGKVIIL----------TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV--   72 (246)
T ss_dssp             TTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC--
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh--
Confidence            4678999          99999999999999999999999999988766544433211222  333322222333333  


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                      .++|++|+++|
T Consensus        73 ~~id~lv~~Ag   83 (246)
T 2ag5_A           73 ERLDVLFNVAG   83 (246)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            36999999887

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.55  E-value=0.01  Score=51.45  Aligned_cols=79  Identities=24%  Similarity=0.382  Sum_probs=53.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~~---  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    +.+....   .|-.+.. +.   
T Consensus        20 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   89 (273)
T 1ae1_A           20 KGTTALV----------TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLM   89 (273)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999987665432    2343322   2333322 11   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+... .++|++++++|.
T Consensus        90 ~~~~~~~~-g~id~lv~nAg~  109 (273)
T 1ae1_A           90 QTVAHVFD-GKLNILVNNAGV  109 (273)
T ss_dssp             HHHHHHTT-SCCCEEEECCCC
T ss_pred             HHHHHHcC-CCCcEEEECCCC
Confidence            22222221 369999999873

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.55  E-value=0.0078  Score=52.34  Aligned_cols=77  Identities=23%  Similarity=0.384  Sum_probs=54.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~~----~~~~  210 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+. +++....   .|-.+...    .+.+
T Consensus        26 ~~k~vlV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           26 NQRVCIV----------TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988776654 4454332   23333221    2222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++|+++|
T Consensus        96 ~~~~g--~iD~lv~nAg  110 (277)
T 4dqx_A           96 TAKWG--RVDVLVNNAG  110 (277)
T ss_dssp             HHHHS--CCCEEEECCC
T ss_pred             HHHcC--CCCEEEECCC
Confidence            23332  6999999988

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.54  E-value=0.0023  Score=54.04  Aligned_cols=98  Identities=15%  Similarity=0.181  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCccHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVA  208 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~  208 (335)
                      ...++.+||.          .| +| .|..+..+++.. +.+|++++.+++..+.+++    .+..  ..+...  +..+
T Consensus        51 ~~~~~~~vLd----------iG-~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~--d~~~  116 (233)
T 2gpy_A           51 KMAAPARILE----------IG-TA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG--DALQ  116 (233)
T ss_dssp             HHHCCSEEEE----------EC-CT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS--CGGG
T ss_pred             hccCCCEEEE----------ec-CC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC--CHHH
Confidence            4457788988          77 44 788888999887 6799999999988877764    2431  222221  2211


Q ss_pred             HHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790          209 RVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (335)
                      .+........||+|+.....    ..+..+.+.|+++|+++..
T Consensus       117 ~~~~~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          117 LGEKLELYPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             SHHHHTTSCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             HHHhcccCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            12222223479999976653    3357788999999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.54  E-value=0.0086  Score=51.39  Aligned_cols=78  Identities=22%  Similarity=0.350  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~---  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    +.+... .+  |-.+.. +.   
T Consensus         8 ~~k~vlV----------TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   77 (260)
T 2ae2_A            8 EGCTALV----------TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELM   77 (260)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999987665432    224322 12  333322 21   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+... .++|++++++|
T Consensus        78 ~~~~~~~~-g~id~lv~~Ag   96 (260)
T 2ae2_A           78 NTVANHFH-GKLNILVNNAG   96 (260)
T ss_dssp             HHHHHHTT-TCCCEEEECCC
T ss_pred             HHHHHHcC-CCCCEEEECCC
Confidence            22222221 36999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.54  E-value=0.0055  Score=51.02  Aligned_cols=96  Identities=10%  Similarity=0.198  Sum_probs=62.9

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  221 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (335)
                      +|||          +|++|.+|..+++.+...|++|++++|++++.+..  .+. ..+..+-.+..+.+.+...  ++|+
T Consensus         2 ~ilI----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~-~~~~~D~~d~~~~~~~~~~--~~d~   66 (219)
T 3dqp_A            2 KIFI----------VGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNV-KAVHFDVDWTPEEMAKQLH--GMDA   66 (219)
T ss_dssp             EEEE----------ESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTE-EEEECCTTSCHHHHHTTTT--TCSE
T ss_pred             eEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCc-eEEEecccCCHHHHHHHHc--CCCE
Confidence            6889          99999999999999999999999999988654432  122 2232222221345555543  6999


Q ss_pred             EEeCCChhh----------HHHhhccccC--CCEEEEEeccCC
Q 019790          222 ILDCMGASY----------FQRNLGSLNI--DGRLFIIGTQGG  252 (335)
Q Consensus       222 vid~~g~~~----------~~~~~~~l~~--~G~~v~~g~~~~  252 (335)
                      ||.++|...          ....++.++.  .++++.++....
T Consensus        67 vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           67 IINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             EEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             EEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            999998531          2233333333  258888876543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.52  E-value=0.0091  Score=51.29  Aligned_cols=77  Identities=23%  Similarity=0.391  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc----CCCEE-E--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADVC-I--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~----g~~~~-~--~~~~~~-~~--  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. ++    +.... +  |-.+.. +.  
T Consensus         6 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~   75 (263)
T 3ai3_A            6 SGKVAVI----------TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAV   75 (263)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4678999          999999999999999999999999999987665442 22    43322 2  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCC
Q 019790          208 -ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+..  .++|++|+++|
T Consensus        76 ~~~~~~~~--g~id~lv~~Ag   94 (263)
T 3ai3_A           76 VESVRSSF--GGADILVNNAG   94 (263)
T ss_dssp             HHHHHHHH--SSCSEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCC
Confidence             2222233  26999999987

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.52  E-value=0.01  Score=50.97  Aligned_cols=79  Identities=27%  Similarity=0.368  Sum_probs=54.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-H---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-F---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~---  206 (335)
                      ..+.++||          +||++.+|.+++..+...|++|++++++.++.+.+.    +.+... .+  |-.+.. +   
T Consensus        27 l~~k~vlI----------TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   96 (262)
T 3rkr_A           27 LSGQVAVV----------TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAF   96 (262)
T ss_dssp             TTTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHH
Confidence            35678999          999999999999999899999999999988765543    233322 22  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  .++|++|.++|.
T Consensus        97 ~~~~~~~~--g~id~lv~~Ag~  116 (262)
T 3rkr_A           97 ATGVLAAH--GRCDVLVNNAGV  116 (262)
T ss_dssp             HHHHHHHH--SCCSEEEECCCC
T ss_pred             HHHHHHhc--CCCCEEEECCCc
Confidence            12222333  269999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.49  E-value=0.0097  Score=51.03  Aligned_cols=77  Identities=23%  Similarity=0.454  Sum_probs=54.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-EE--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~-~---~  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.+    .+... .+  |-.+.. +   .
T Consensus         5 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   74 (257)
T 3imf_A            5 KEKVVII----------TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMI   74 (257)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999999887766542    23222 22  333322 1   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++++++|
T Consensus        75 ~~~~~~~g--~id~lv~nAg   92 (257)
T 3imf_A           75 EQIDEKFG--RIDILINNAA   92 (257)
T ss_dssp             HHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHcC--CCCEEEECCC
Confidence            22333332  6999999988

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.49  E-value=0.012  Score=45.03  Aligned_cols=76  Identities=16%  Similarity=0.216  Sum_probs=53.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      +.+++|          .|+ |.+|..+++.+...|++|+++++++++.+.+++.+... +..+..+ .+.+.+. ...++
T Consensus         6 ~~~v~I----------~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~-~~~d~~~-~~~l~~~-~~~~~   71 (144)
T 2hmt_A            6 NKQFAV----------IGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHA-VIANATE-ENELLSL-GIRNF   71 (144)
T ss_dssp             CCSEEE----------ECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEE-EECCTTC-HHHHHTT-TGGGC
T ss_pred             CCcEEE----------ECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEE-EEeCCCC-HHHHHhc-CCCCC
Confidence            456888          885 99999999999999999999999888777666555533 3222222 2233332 22469


Q ss_pred             cEEEeCCChh
Q 019790          220 DVILDCMGAS  229 (335)
Q Consensus       220 d~vid~~g~~  229 (335)
                      |+++.|++..
T Consensus        72 d~vi~~~~~~   81 (144)
T 2hmt_A           72 EYVIVAIGAN   81 (144)
T ss_dssp             SEEEECCCSC
T ss_pred             CEEEECCCCc
Confidence            9999999964

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.49  E-value=0.0096  Score=51.33  Aligned_cols=77  Identities=22%  Similarity=0.304  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H---c--CCCEE-E--eCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L--GADVC-I--NYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~---~--g~~~~-~--~~~~~~-~~-  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +   .  +.... +  |-.+.. +. 
T Consensus        12 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   81 (267)
T 1iy8_A           12 TDRVVLI----------TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEA   81 (267)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHH
Confidence            4678999          999999999999999999999999999987665442 1   1  43322 2  333322 21 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  .++|++|+++|
T Consensus        82 ~~~~~~~~~--g~id~lv~nAg  101 (267)
T 1iy8_A           82 YVTATTERF--GRIDGFFNNAG  101 (267)
T ss_dssp             HHHHHHHHH--SCCSEEEECCC
T ss_pred             HHHHHHHHc--CCCCEEEECCC
Confidence              2222223  26899999887

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.48  E-value=0.011  Score=50.69  Aligned_cols=79  Identities=24%  Similarity=0.351  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~~---  207 (335)
                      .+.++||          +|++|.+|.++++.+...|++|+++.+++++.+.+.    +.+.... +  |-.+.. +.   
T Consensus        13 ~~k~vlI----------TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (266)
T 1xq1_A           13 KAKTVLV----------TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLM   82 (266)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887655432    2343322 2  322222 11   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..+ .++|++|.++|.
T Consensus        83 ~~~~~~~~-~~id~li~~Ag~  102 (266)
T 1xq1_A           83 QTVSSMFG-GKLDILINNLGA  102 (266)
T ss_dssp             HHHHHHHT-TCCSEEEEECCC
T ss_pred             HHHHHHhC-CCCcEEEECCCC
Confidence            12222221 368999998873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.48  E-value=0.0086  Score=52.14  Aligned_cols=77  Identities=25%  Similarity=0.388  Sum_probs=54.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~---~~~~  210 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++.++.++.+.+. +.+.... +  |-.+.. +   .+.+
T Consensus         4 ~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (281)
T 3zv4_A            4 TGEVALI----------TGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERC   73 (281)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988876664 3443332 2  333322 1   2233


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++++++|
T Consensus        74 ~~~~--g~iD~lvnnAg   88 (281)
T 3zv4_A           74 LAAF--GKIDTLIPNAG   88 (281)
T ss_dssp             HHHH--SCCCEEECCCC
T ss_pred             HHhc--CCCCEEEECCC
Confidence            3333  26999999987

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.47  E-value=0.0079  Score=52.18  Aligned_cols=78  Identities=22%  Similarity=0.340  Sum_probs=54.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEE--eCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~  210 (335)
                      .+.++||          +||++.+|.+++..+...|++|+++++++++.+.+. +++.. ..+  |-.+...    .+.+
T Consensus        27 ~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           27 GKKIAIV----------TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -CCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988776654 44422 222  3333221    2222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..  .++|++++++|.
T Consensus        97 ~~~~--g~iD~lVnnAg~  112 (272)
T 4dyv_A           97 VEKF--GRVDVLFNNAGT  112 (272)
T ss_dssp             HHHH--SCCCEEEECCCC
T ss_pred             HHHc--CCCCEEEECCCC
Confidence            3333  269999998873

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.47  E-value=0.012  Score=50.34  Aligned_cols=77  Identities=23%  Similarity=0.394  Sum_probs=53.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~---~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +++.... +  |-.+.. +   .+.+
T Consensus         5 ~~k~vlV----------TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (253)
T 1hxh_A            5 QGKVALV----------TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAV   74 (253)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999987766553 3443322 2  222222 1   1222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++|+++|
T Consensus        75 ~~~~--g~id~lv~~Ag   89 (253)
T 1hxh_A           75 QRRL--GTLNVLVNNAG   89 (253)
T ss_dssp             HHHH--CSCCEEEECCC
T ss_pred             HHHc--CCCCEEEECCC
Confidence            2223  25899999987

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.46  E-value=0.026  Score=43.34  Aligned_cols=93  Identities=23%  Similarity=0.268  Sum_probs=63.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      ..+++|          .| .|.+|..+++.+...|.+|+++++++++.+.+++.+...+. .+..+ .+.+.+ .+-..+
T Consensus         6 ~~~v~I----------~G-~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~-gd~~~-~~~l~~-~~~~~~   71 (141)
T 3llv_A            6 RYEYIV----------IG-SEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVI-ADPTD-ESFYRS-LDLEGV   71 (141)
T ss_dssp             CCSEEE----------EC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEE-CCTTC-HHHHHH-SCCTTC
T ss_pred             CCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEE-CCCCC-HHHHHh-CCcccC
Confidence            346788          77 59999999999999999999999999998888877764432 22222 223333 234579


Q ss_pred             cEEEeCCChhhH----HHhhccccCCCEEEEE
Q 019790          220 DVILDCMGASYF----QRNLGSLNIDGRLFII  247 (335)
Q Consensus       220 d~vid~~g~~~~----~~~~~~l~~~G~~v~~  247 (335)
                      |.++.++++...    ....+.+. ..+++..
T Consensus        72 d~vi~~~~~~~~n~~~~~~a~~~~-~~~iia~  102 (141)
T 3llv_A           72 SAVLITGSDDEFNLKILKALRSVS-DVYAIVR  102 (141)
T ss_dssp             SEEEECCSCHHHHHHHHHHHHHHC-CCCEEEE
T ss_pred             CEEEEecCCHHHHHHHHHHHHHhC-CceEEEE
Confidence            999999996432    22334444 5555554

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.45  E-value=0.0067  Score=51.33  Aligned_cols=77  Identities=22%  Similarity=0.261  Sum_probs=53.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCE-E--EeCCCcc-H---HHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-C--INYKTED-F---VARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~-~--~~~~~~~-~---~~~~~  211 (335)
                      +.++||          +||++++|.+++..+...|++|+++++++++.+.+.+ ++... .  .|-.+.. +   .+.+.
T Consensus         3 ~k~vlV----------TGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            3 LGHIIV----------TGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             CCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            467899          9999999999999999999999999999887766542 32221 1  2333322 1   22233


Q ss_pred             HHhCCCcccEEEeCCCh
Q 019790          212 EETGGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~  228 (335)
                      +..+  ++|++++++|.
T Consensus        73 ~~~g--~id~lvnnAg~   87 (235)
T 3l6e_A           73 EWGG--LPELVLHCAGT   87 (235)
T ss_dssp             HHHC--SCSEEEEECCC
T ss_pred             HhcC--CCcEEEECCCC
Confidence            3332  68999998873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.44  E-value=0.0093  Score=50.79  Aligned_cols=79  Identities=24%  Similarity=0.352  Sum_probs=53.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE--EE--eCCCcc-HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV--CI--NYKTED-FVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~--~~--~~~~~~-~~~~~~~  212 (335)
                      .+.++||          +|++|.+|.++++.+...|++|+++++++++.+.+. +++...  .+  |..+.. +.+.+.+
T Consensus        10 ~~k~vlI----------TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A           10 DGACAAV----------TGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHH
Confidence            4678999          999999999999999999999999999987765543 333322  22  333322 2122211


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      .....++|++|.++|
T Consensus        80 ~~~~~~id~li~~Ag   94 (254)
T 2wsb_A           80 AEAVAPVSILVNSAG   94 (254)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhhCCCcEEEECCc
Confidence            111136999999887

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.44  E-value=0.003  Score=53.83  Aligned_cols=105  Identities=22%  Similarity=0.245  Sum_probs=69.9

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHh
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEET  214 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~  214 (335)
                      ++-.|.++||          +|+++++|.+.++.+-..|++|+++.++++..+....-... ...|-.+.+..+++.+..
T Consensus         7 dlf~GK~alV----------TGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (242)
T 4b79_A            7 DIYAGQQVLV----------TGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEAL   76 (242)
T ss_dssp             TTTTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhc
Confidence            3447899999          99999999999999999999999999987765433211111 122333433334444444


Q ss_pred             CCCcccEEEeCCChh---------hH---------------HHhhcccc-CCCEEEEEeccCC
Q 019790          215 GGKGVDVILDCMGAS---------YF---------------QRNLGSLN-IDGRLFIIGTQGG  252 (335)
Q Consensus       215 ~~~~~d~vid~~g~~---------~~---------------~~~~~~l~-~~G~~v~~g~~~~  252 (335)
                        +++|++++++|-.         .+               +.+++.|+ .+|+|+.+++..+
T Consensus        77 --g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           77 --PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             --SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             --CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence              3699999998731         11               23344553 4799999976654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.43  E-value=0.014  Score=50.07  Aligned_cols=77  Identities=18%  Similarity=0.324  Sum_probs=51.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-HHHHH-Hc----CCCEEE---eCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCK-DL----GADVCI---NYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-~~~~~-~~----g~~~~~---~~~~~~-~~-  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++ .+.+. ++    +....+   |-.+.. +. 
T Consensus         3 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   72 (260)
T 1x1t_A            3 KGKVAVV----------TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRG   72 (260)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHH
Confidence            3578999          9999999999999999999999999988765 44332 21    433322   333322 11 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  .++|++|+++|
T Consensus        73 ~~~~~~~~~--g~iD~lv~~Ag   92 (260)
T 1x1t_A           73 LVDNAVRQM--GRIDILVNNAG   92 (260)
T ss_dssp             HHHHHHHHH--SCCSEEEECCC
T ss_pred             HHHHHHHhc--CCCCEEEECCC
Confidence              2222222  26999999987

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.43  E-value=0.0081  Score=52.25  Aligned_cols=78  Identities=21%  Similarity=0.320  Sum_probs=54.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEE--eCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~  210 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+. +++.. ..+  |-.+...    .+.+
T Consensus        28 ~gk~vlV----------TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           28 AGKVAIV----------TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             TTCEEEE----------TTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988766654 44432 222  3333221    2233


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..+  ++|++++++|.
T Consensus        98 ~~~~g--~iD~lvnnAg~  113 (277)
T 3gvc_A           98 VAAFG--GVDKLVANAGV  113 (277)
T ss_dssp             HHHHS--SCCEEEECCCC
T ss_pred             HHHcC--CCCEEEECCCC
Confidence            33333  69999999873

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.43  E-value=0.0079  Score=51.50  Aligned_cols=77  Identities=26%  Similarity=0.465  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCcc-HH---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTED-FV---ARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~-~~---~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +++... .  .|-.+.+ +.   +.+
T Consensus         4 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (254)
T 1hdc_A            4 SGKTVII----------TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999987766554 343222 1  2333322 22   222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++|+++|
T Consensus        74 ~~~~--g~iD~lv~nAg   88 (254)
T 1hdc_A           74 REEF--GSVDGLVNNAG   88 (254)
T ss_dssp             HHHH--SCCCEEEECCC
T ss_pred             HHHc--CCCCEEEECCC
Confidence            2222  26999999987

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.43  E-value=0.032  Score=48.84  Aligned_cols=103  Identities=16%  Similarity=0.156  Sum_probs=66.2

Q ss_pred             CCCCEEEEeeccccccccccccch--HHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCccH---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSG--IGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDF---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~--~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~---  206 (335)
                      -.+.++||          +|++|.  +|.++++.+...|++|+++.++++..+.++    +.+....+  |-.+..-   
T Consensus        29 l~gk~~lV----------TGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   98 (293)
T 3grk_A           29 LQGKRGLI----------LGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDA   98 (293)
T ss_dssp             TTTCEEEE----------ECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEE----------EcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHH
Confidence            45788999          999855  999999999999999999998865443332    23432222  3333222   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCChhh------------------------------HHHhhccccCCCEEEEEeccCC
Q 019790          207 -VARVKEETGGKGVDVILDCMGASY------------------------------FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~~~------------------------------~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                       .+.+.+..  .++|++|+++|...                              .+.++..+..+|+++.++....
T Consensus        99 ~~~~~~~~~--g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A           99 VFETLEKKW--GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             HHHHHHHHT--SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             HHHHHHHhc--CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence             22222222  26999999987310                              1234455667899999876553

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.42  E-value=0.023  Score=49.24  Aligned_cols=77  Identities=22%  Similarity=0.340  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC-CE--EE--eCCCcc-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DV--CI--NYKTED-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~-~~--~~--~~~~~~-~~-  207 (335)
                      .+.++||          +||+|.+|.++++.+...|++|++++++.++.+.+.    ..+. ..  .+  |-.+.. +. 
T Consensus        31 ~~k~vlV----------TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~  100 (279)
T 1xg5_A           31 RDRLALV----------TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILS  100 (279)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHH
Confidence            4678999          999999999999999999999999999887665443    2332 11  22  333322 11 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  .++|++|+++|
T Consensus       101 ~~~~~~~~~--g~iD~vi~~Ag  120 (279)
T 1xg5_A          101 MFSAIRSQH--SGVDICINNAG  120 (279)
T ss_dssp             HHHHHHHHH--CCCSEEEECCC
T ss_pred             HHHHHHHhC--CCCCEEEECCC
Confidence              1222222  26999999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.42  E-value=0.0073  Score=51.68  Aligned_cols=76  Identities=21%  Similarity=0.265  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~---~  207 (335)
                      .+.++||          +||++++|.++++.+...|++|+++++++++.+.+.    +.+... .+  |-.+.. +   .
T Consensus         6 ~~k~vlV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   75 (252)
T 3h7a_A            6 RNATVAV----------IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFL   75 (252)
T ss_dssp             CSCEEEE----------ECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887765543    234322 22  333322 1   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+.   .++|++++++|
T Consensus        76 ~~~~~~---g~id~lv~nAg   92 (252)
T 3h7a_A           76 NAADAH---APLEVTIFNVG   92 (252)
T ss_dssp             HHHHHH---SCEEEEEECCC
T ss_pred             HHHHhh---CCceEEEECCC
Confidence            233333   36999999988

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.42  E-value=0.014  Score=49.68  Aligned_cols=77  Identities=29%  Similarity=0.415  Sum_probs=52.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~---  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    ..+... .+  |-.+.. +.   
T Consensus         6 ~~k~~lV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~   75 (247)
T 2jah_A            6 QGKVALI----------TGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAV   75 (247)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999987765443    234332 22  333322 11   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|+++|
T Consensus        76 ~~~~~~~--g~id~lv~nAg   93 (247)
T 2jah_A           76 ASTVEAL--GGLDILVNNAG   93 (247)
T ss_dssp             HHHHHHH--SCCSEEEECCC
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence            2222223  26999999887

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.42  E-value=0.01  Score=52.21  Aligned_cols=78  Identities=24%  Similarity=0.329  Sum_probs=54.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-H---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-F---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~---  206 (335)
                      -.+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+.    ..+....   .|-.+.+ +   
T Consensus        29 l~gk~vlV----------TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   98 (301)
T 3tjr_A           29 FDGRAAVV----------TGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRL   98 (301)
T ss_dssp             STTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            35778999          999999999999999999999999999988766543    2343322   2333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  .++|++|+++|
T Consensus        99 ~~~~~~~~--g~id~lvnnAg  117 (301)
T 3tjr_A           99 ADEAFRLL--GGVDVVFSNAG  117 (301)
T ss_dssp             HHHHHHHH--SSCSEEEECCC
T ss_pred             HHHHHHhC--CCCCEEEECCC
Confidence            12222223  26999999988

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.42  E-value=0.018  Score=49.08  Aligned_cols=73  Identities=26%  Similarity=0.329  Sum_probs=51.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~  216 (335)
                      ..+.++||          +|+++.+|.++++.+...|++|++++++++..   ++++....+ |- ..+.. .+.+... 
T Consensus        17 ~~~k~vlV----------TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~D~-~~~~~-~~~~~~~-   80 (249)
T 1o5i_A           17 IRDKGVLV----------LAASRGIGRAVADVLSQEGAEVTICARNEELL---KRSGHRYVVCDL-RKDLD-LLFEKVK-   80 (249)
T ss_dssp             CTTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---HHTCSEEEECCT-TTCHH-HHHHHSC-
T ss_pred             cCCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH---HhhCCeEEEeeH-HHHHH-HHHHHhc-
Confidence            45778999          99999999999999999999999999987443   334422222 22 22333 3333332 


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                       ++|++|+++|
T Consensus        81 -~iD~lv~~Ag   90 (249)
T 1o5i_A           81 -EVDILVLNAG   90 (249)
T ss_dssp             -CCSEEEECCC
T ss_pred             -CCCEEEECCC
Confidence             6999999987

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.41  E-value=0.0095  Score=51.44  Aligned_cols=77  Identities=17%  Similarity=0.303  Sum_probs=53.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~----~  207 (335)
                      .+.++||          +||++++|.+++..+...|++|+++++++++.+.+.    +.+....   .|-.+..-    .
T Consensus         3 ~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   72 (264)
T 3tfo_A            3 MDKVILI----------TGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFA   72 (264)
T ss_dssp             TTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence            3578999          999999999999999999999999999988765543    2343222   23333221    2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++++++|
T Consensus        73 ~~~~~~~--g~iD~lVnnAG   90 (264)
T 3tfo_A           73 QAAVDTW--GRIDVLVNNAG   90 (264)
T ss_dssp             HHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence            2233333  26999999987

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.41  E-value=0.011  Score=51.06  Aligned_cols=77  Identities=23%  Similarity=0.341  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEE--eCCCcc-HH---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCI--NYKTED-FV---ARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~-~~---~~~~  211 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.+ +.....+  |-.+.. +.   +.+.
T Consensus         8 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   77 (270)
T 1yde_A            8 AGKVVVV----------TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETI   77 (270)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHH
Confidence            4678999          9999999999999999999999999999887765543 3222222  333322 11   2222


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +..  .++|++|+++|
T Consensus        78 ~~~--g~iD~lv~nAg   91 (270)
T 1yde_A           78 RRF--GRLDCVVNNAG   91 (270)
T ss_dssp             HHH--SCCCEEEECCC
T ss_pred             HHc--CCCCEEEECCC
Confidence            223  26999999886

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.41  E-value=0.025  Score=48.87  Aligned_cols=100  Identities=16%  Similarity=0.170  Sum_probs=68.3

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHc-----C--C-CEEEeCC
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL-----G--A-DVCINYK  202 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~-----g--~-~~~~~~~  202 (335)
                      ....+.++++||.          .| +| .|..+..+++..  +.+|++++.+++..+.+++.     |  . ...+...
T Consensus        93 ~~~~~~~~~~vLd----------iG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~  160 (280)
T 1i9g_A           93 HEGDIFPGARVLE----------AG-AG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS  160 (280)
T ss_dssp             HHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS
T ss_pred             HHcCCCCCCEEEE----------Ec-cc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC
Confidence            5567889999998          77 44 788888888875  56999999999888777642     3  2 2222111


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEec
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~  249 (335)
                        ++.+.   ......||+|+.....  ..+..+.+.|+++|+++....
T Consensus       161 --d~~~~---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          161 --DLADS---ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             --CGGGC---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             --chHhc---CCCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence              11110   1123479999986654  347788999999999987653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.40  E-value=0.0084  Score=51.15  Aligned_cols=77  Identities=31%  Similarity=0.507  Sum_probs=54.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC---EEEeCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD---VCINYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~---~~~~~~~~~~----~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+.+.+ ++..   ...|-.+..-    .+.+
T Consensus         8 ~gk~~lV----------TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            8 EGKVALV----------TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHH
Confidence            4678999          9999999999999999999999999999887766542 3322   1224333222    2233


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++++++|
T Consensus        78 ~~~~g--~iD~lv~nAg   92 (248)
T 3op4_A           78 TDEFG--GVDILVNNAG   92 (248)
T ss_dssp             HHHHC--CCSEEEECCC
T ss_pred             HHHcC--CCCEEEECCC
Confidence            33332  6999999987

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.40  E-value=0.011  Score=50.94  Aligned_cols=78  Identities=24%  Similarity=0.312  Sum_probs=53.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-----HcCCCEE-E--eCCCcc-HH-
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADVC-I--NYKTED-FV-  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-----~~g~~~~-~--~~~~~~-~~-  207 (335)
                      ..+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.     ..+.... +  |-.+.. +. 
T Consensus        19 l~~k~~lV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   88 (267)
T 1vl8_A           19 LRGRVALV----------TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKK   88 (267)
T ss_dssp             CTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence            35678999          999999999999999999999999999987655432     2244322 2  333322 11 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  .++|++|+++|
T Consensus        89 ~~~~~~~~~--g~iD~lvnnAg  108 (267)
T 1vl8_A           89 LLEAVKEKF--GKLDTVVNAAG  108 (267)
T ss_dssp             HHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHc--CCCCEEEECCC
Confidence              2222233  26999999987

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.40  E-value=0.01  Score=51.44  Aligned_cols=77  Identities=27%  Similarity=0.329  Sum_probs=53.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EE--eCCCcc-HH---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTED-FV---ARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~-~~---~~~  210 (335)
                      .+.++||          +||+|.+|.++++.+...|++|++++++.++.+.+. +.+... .+  |-.+.. +.   +.+
T Consensus         4 ~~k~vlV----------TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            4 SAKVWLV----------TGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             CCCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHH
Confidence            3578999          999999999999999999999999999988766654 344332 22  333322 11   222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++|.++|
T Consensus        74 ~~~~g--~id~lv~~Ag   88 (281)
T 3m1a_A           74 LARYG--RVDVLVNNAG   88 (281)
T ss_dssp             HHHHS--CCSEEEECCC
T ss_pred             HHhCC--CCCEEEECCC
Confidence            22232  6999999987

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.39  E-value=0.027  Score=47.65  Aligned_cols=78  Identities=31%  Similarity=0.430  Sum_probs=53.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcC--CCEEE--eC--CCcc--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG--ADVCI--NY--KTED--  205 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g--~~~~~--~~--~~~~--  205 (335)
                      -.+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+.    +.+  ...++  +.  .+..  
T Consensus        12 l~~k~vlI----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~   81 (247)
T 3i1j_A           12 LKGRVILV----------TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQY   81 (247)
T ss_dssp             TTTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHH
T ss_pred             CCCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHH
Confidence            35778999          999999999999999999999999999988766543    223  12222  22  2211  


Q ss_pred             --HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 --FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 --~~~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+.+..+  ++|++|.++|
T Consensus        82 ~~~~~~~~~~~g--~id~lv~nAg  103 (247)
T 3i1j_A           82 RELAARVEHEFG--RLDGLLHNAS  103 (247)
T ss_dssp             HHHHHHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHHHHhCC--CCCEEEECCc
Confidence              1223333332  6999999887

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.39  E-value=0.014  Score=49.70  Aligned_cols=77  Identities=16%  Similarity=0.279  Sum_probs=52.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhHH-HHHHcCCCEE-E--eCCCcc-HH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA-VCKDLGADVC-I--NYKTED-FV---AR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~-~~~~~g~~~~-~--~~~~~~-~~---~~  209 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++ ++.+ .+++.+.... +  |-.+.. +.   +.
T Consensus         6 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (249)
T 2ew8_A            6 KDKLAVI----------TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ   75 (249)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            4678999          99999999999999999999999999887 5543 3444554322 2  333322 21   12


Q ss_pred             HHHHhCCCcccEEEeCCC
Q 019790          210 VKEETGGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g  227 (335)
                      +.+..  .++|++|+++|
T Consensus        76 ~~~~~--g~id~lv~nAg   91 (249)
T 2ew8_A           76 VISTF--GRCDILVNNAG   91 (249)
T ss_dssp             HHHHH--SCCCEEEECCC
T ss_pred             HHHHc--CCCCEEEECCC
Confidence            22223  36999999887

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.38  E-value=0.017  Score=49.43  Aligned_cols=79  Identities=22%  Similarity=0.333  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCcc-HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTED-FVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~-~~~  208 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+. ++     +.. ..+  |-.+.. +.+
T Consensus         6 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   75 (260)
T 2z1n_A            6 QGKLAVV----------TAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDR   75 (260)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHH
Confidence            4678999          999999999999999999999999999987665443 22     212 222  333322 222


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.....++|++|+++|
T Consensus        76 ~~~~~~~~~gid~lv~~Ag   94 (260)
T 2z1n_A           76 LFEKARDLGGADILVYSTG   94 (260)
T ss_dssp             HHHHHHHTTCCSEEEECCC
T ss_pred             HHHHHHHhcCCCEEEECCC
Confidence            2222222223999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.37  E-value=0.013  Score=49.61  Aligned_cols=77  Identities=23%  Similarity=0.418  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cCCCEE-E--eCCCcc-HHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC-I--NYKTED-FVA-  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g~~~~-~--~~~~~~-~~~-  208 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+++++++++.+.+.+     .+.... +  |-.+.. +.+ 
T Consensus         6 ~~~~vlV----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (248)
T 2pnf_A            6 QGKVSLV----------TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKA   75 (248)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHH
Confidence            4678999          9999999999999999999999999998876654432     243322 2  333322 211 


Q ss_pred             --HHHHHhCCCcccEEEeCCC
Q 019790          209 --RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 --~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+..  .++|++|.++|
T Consensus        76 ~~~~~~~~--~~~d~vi~~Ag   94 (248)
T 2pnf_A           76 FEEIYNLV--DGIDILVNNAG   94 (248)
T ss_dssp             HHHHHHHS--SCCSEEEECCC
T ss_pred             HHHHHHhc--CCCCEEEECCC
Confidence              222222  26999999887

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.36  E-value=0.021  Score=49.18  Aligned_cols=77  Identities=27%  Similarity=0.503  Sum_probs=54.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----H-cCCCEE---EeCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGADVC---INYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~-~g~~~~---~~~~~~~~----  206 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    + .+....   .|-.+...    
T Consensus        19 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~   88 (266)
T 4egf_A           19 DGKRALI----------TGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAEL   88 (266)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            4678999          999999999999999999999999999987765543    1 343322   23333332    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++++++|
T Consensus        89 ~~~~~~~~g--~id~lv~nAg  107 (266)
T 4egf_A           89 ARRAAEAFG--GLDVLVNNAG  107 (266)
T ss_dssp             HHHHHHHHT--SCSEEEEECC
T ss_pred             HHHHHHHcC--CCCEEEECCC
Confidence            223333332  6999999887

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.35  E-value=0.011  Score=51.38  Aligned_cols=77  Identities=31%  Similarity=0.450  Sum_probs=53.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c---CCCEEE---eCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L---GADVCI---NYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~---g~~~~~---~~~~~~~----~  207 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.+ +   +....+   |-.+...    .
T Consensus         7 ~gk~vlV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   76 (280)
T 3tox_A            7 EGKIAIV----------TGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALV   76 (280)
T ss_dssp             TTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999999887665542 2   333322   2222221    2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++|+++|
T Consensus        77 ~~~~~~~g--~iD~lvnnAg   94 (280)
T 3tox_A           77 ELAVRRFG--GLDTAFNNAG   94 (280)
T ss_dssp             HHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHcC--CCCEEEECCC
Confidence            22223332  6999999987

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.33  E-value=0.014  Score=49.52  Aligned_cols=79  Identities=22%  Similarity=0.248  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+.+.    +.+.... +  |-.+.. +.+.+
T Consensus         4 ~~k~vlI----------TGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   73 (247)
T 3lyl_A            4 NEKVALV----------TGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFF   73 (247)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            3578999          999999999999999999999999999987765543    3344332 2  333322 22222


Q ss_pred             HHH-hCCCcccEEEeCCC
Q 019790          211 KEE-TGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~-~~~~~~d~vid~~g  227 (335)
                      .+. ....++|++|+++|
T Consensus        74 ~~~~~~~~~id~li~~Ag   91 (247)
T 3lyl_A           74 AEIKAENLAIDILVNNAG   91 (247)
T ss_dssp             HHHHHTTCCCSEEEECCC
T ss_pred             HHHHHHcCCCCEEEECCC
Confidence            221 11236999999987

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.32  E-value=0.012  Score=50.24  Aligned_cols=78  Identities=19%  Similarity=0.289  Sum_probs=54.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-EE--eCCCcc----HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTED----FV  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~----~~  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.+    .+... .+  |-.+..    +.
T Consensus         8 ~~k~vlI----------TGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   77 (253)
T 3qiv_A            8 ENKVGIV----------TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMA   77 (253)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999999887665532    23322 22  333322    12


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..+  ++|++|.++|.
T Consensus        78 ~~~~~~~g--~id~li~~Ag~   96 (253)
T 3qiv_A           78 DRTLAEFG--GIDYLVNNAAI   96 (253)
T ss_dssp             HHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHcC--CCCEEEECCCc
Confidence            23333332  69999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.32  E-value=0.01  Score=50.77  Aligned_cols=79  Identities=25%  Similarity=0.281  Sum_probs=53.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c-C-CCEE--EeC--CCcc-H
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L-G-ADVC--INY--KTED-F  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~-g-~~~~--~~~--~~~~-~  206 (335)
                      -.+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.+    . + ....  .|-  .+.. .
T Consensus        10 l~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   79 (252)
T 3f1l_A           10 LNDRIILV----------TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENC   79 (252)
T ss_dssp             TTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHH
T ss_pred             cCCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHH
Confidence            45778999          9999999999999999999999999999887655432    1 2 1122  233  2221 1


Q ss_pred             ---HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 ---VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ---~~~~~~~~~~~~~d~vid~~g~  228 (335)
                         .+.+.+..  .++|++++++|.
T Consensus        80 ~~~~~~~~~~~--g~id~lv~nAg~  102 (252)
T 3f1l_A           80 QQLAQRIAVNY--PRLDGVLHNAGL  102 (252)
T ss_dssp             HHHHHHHHHHC--SCCSEEEECCCC
T ss_pred             HHHHHHHHHhC--CCCCEEEECCcc
Confidence               22222222  369999998873

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.31  E-value=0.032  Score=47.53  Aligned_cols=78  Identities=18%  Similarity=0.297  Sum_probs=53.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----c----CCCEEE--eCCCcc-H-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L----GADVCI--NYKTED-F-  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~----g~~~~~--~~~~~~-~-  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.+    .    +....+  |-.+.. + 
T Consensus         6 ~~k~~lV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   75 (250)
T 3nyw_A            6 QKGLAII----------TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKAD   75 (250)
T ss_dssp             CCCEEEE----------ESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHH
Confidence            4678999          9999999999999998899999999999887665532    1    222222  333322 1 


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 --VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+.+..  .++|++++++|.
T Consensus        76 ~~~~~~~~~~--g~iD~lvnnAg~   97 (250)
T 3nyw_A           76 TEIKDIHQKY--GAVDILVNAAAM   97 (250)
T ss_dssp             HHHHHHHHHH--CCEEEEEECCCC
T ss_pred             HHHHHHHHhc--CCCCEEEECCCc
Confidence              22233333  269999999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.31  E-value=0.0081  Score=52.00  Aligned_cols=77  Identities=18%  Similarity=0.267  Sum_probs=54.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-E--EeCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-C--INYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~--~~~~~~~~----~~~~  210 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+. +++... .  .|-.+..-    .+.+
T Consensus        10 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B           10 ENKVAII----------TGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999887766553 444322 2  23333221    2223


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++++++|
T Consensus        80 ~~~~g--~id~lv~nAg   94 (271)
T 3tzq_B           80 IDTFG--RLDIVDNNAA   94 (271)
T ss_dssp             HHHHS--CCCEEEECCC
T ss_pred             HHHcC--CCCEEEECCC
Confidence            33332  6999999887

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.31  E-value=0.0081  Score=52.05  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=50.7

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHHHH-cCCCEEE--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~-~~--  207 (335)
                      .+.++||          +|++  +.+|.++++.+...|++|++++++++   ..+.+.+ .+....+  |-.+.. +.  
T Consensus         5 ~~k~vlV----------TGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   74 (275)
T 2pd4_A            5 KGKKGLI----------VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSL   74 (275)
T ss_dssp             TTCEEEE----------ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHH
Confidence            4678999          9998  99999999999999999999998865   3333332 3322222  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCC
Q 019790          208 -ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+..  .++|++|+++|
T Consensus        75 ~~~~~~~~--g~id~lv~nAg   93 (275)
T 2pd4_A           75 YNSVKKDL--GSLDFIVHSVA   93 (275)
T ss_dssp             HHHHHHHT--SCEEEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCc
Confidence             2222222  36999999887

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.30  E-value=0.021  Score=50.41  Aligned_cols=99  Identities=23%  Similarity=0.302  Sum_probs=68.4

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCC---EEEeCCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD---VCINYKT  203 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~  203 (335)
                      +....++.++.+||-          .| +|. |..+..+++..|++|++++.+++..+.+++.    +..   .+...+.
T Consensus        82 ~~~~~~~~~~~~vLD----------iG-cG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~  149 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLD----------IG-CGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW  149 (318)
T ss_dssp             HHTTSCCCTTCEEEE----------ES-CTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG
T ss_pred             HHHhcCCCCcCEEEE----------Ec-ccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence            445567789999998          87 444 8888899988899999999999988887643    321   1222211


Q ss_pred             ccHHHHHHHHhCCCcccEEEeC-----CCh----hhHHHhhccccCCCEEEEEecc
Q 019790          204 EDFVARVKEETGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ..       . . ..||+|+..     ++.    ..+..+.+.|+++|+++.....
T Consensus       150 ~~-------~-~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          150 ED-------F-A-EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             GG-------C-C-CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             HH-------C-C-CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            11       1 1 479999875     432    2356778999999999876443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.30  E-value=0.011  Score=50.09  Aligned_cols=78  Identities=24%  Similarity=0.361  Sum_probs=53.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHHc-CCCE-EE--eCCCcc-H---HHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDL-GADV-CI--NYKTED-F---VAR  209 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~-g~~~-~~--~~~~~~-~---~~~  209 (335)
                      +.++||          +|++|.+|.++++.+...|  ++|++++++.++.+.+.+. +... .+  |-.+.. +   .+.
T Consensus         3 ~k~vlI----------tGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (250)
T 1yo6_A            3 PGSVVV----------TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CSEEEE----------SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEE----------ecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHH
Confidence            567999          9999999999999999999  9999999998877766654 2222 22  333322 1   122


Q ss_pred             HHHHhCCCcccEEEeCCC
Q 019790          210 VKEETGGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g  227 (335)
                      +.+..+..++|++|.++|
T Consensus        73 ~~~~~g~~~id~li~~Ag   90 (250)
T 1yo6_A           73 VGEIVGSDGLSLLINNAG   90 (250)
T ss_dssp             HHHHHGGGCCCEEEECCC
T ss_pred             HHHhcCCCCCcEEEECCc
Confidence            222222126999999886

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.30  E-value=0.034  Score=47.20  Aligned_cols=77  Identities=18%  Similarity=0.288  Sum_probs=53.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-EeCCCcc-HH---HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTED-FV---ARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~-~~---~~~~~  212 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +++...+ .|-.+.. +.   +.+.+
T Consensus         4 ~~k~vlV----------TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (245)
T 1uls_A            4 KDKAVLI----------TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALA   73 (245)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999          999999999999999999999999999988776554 3453221 2333322 11   22222


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      ..  .++|++|+++|
T Consensus        74 ~~--g~id~lvn~Ag   86 (245)
T 1uls_A           74 HL--GRLDGVVHYAG   86 (245)
T ss_dssp             HH--SSCCEEEECCC
T ss_pred             Hc--CCCCEEEECCC
Confidence            23  26999999987

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.29  E-value=0.014  Score=50.63  Aligned_cols=77  Identities=34%  Similarity=0.410  Sum_probs=52.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~---~  207 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+.    +.+.... +  |-.+.. +   .
T Consensus        21 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   90 (277)
T 2rhc_B           21 DSEVALV----------TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALV   90 (277)
T ss_dssp             TSCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999987655432    2343322 2  333322 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|+++|
T Consensus        91 ~~~~~~~--g~iD~lv~~Ag  108 (277)
T 2rhc_B           91 AAVVERY--GPVDVLVNNAG  108 (277)
T ss_dssp             HHHHHHT--CSCSEEEECCC
T ss_pred             HHHHHHh--CCCCEEEECCC
Confidence            2222222  26999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.28  E-value=0.014  Score=50.07  Aligned_cols=77  Identities=21%  Similarity=0.331  Sum_probs=52.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~---~  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+.+.    +.+.... +  |-.+.. +   .
T Consensus         6 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   75 (262)
T 1zem_A            6 NGKVCLV----------TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTV   75 (262)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999987665443    2243322 2  333322 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++|+++|
T Consensus        76 ~~~~~~~g--~id~lv~nAg   93 (262)
T 1zem_A           76 DSVVRDFG--KIDFLFNNAG   93 (262)
T ss_dssp             HHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHhC--CCCEEEECCC
Confidence            22223332  6999999886

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.28  E-value=0.016  Score=49.73  Aligned_cols=77  Identities=21%  Similarity=0.246  Sum_probs=52.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~---~  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    ..+....   .|-.+.. +   .
T Consensus        13 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   82 (260)
T 2zat_A           13 ENKVALV----------TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLV   82 (260)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887654432    2343322   2333322 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|+++|
T Consensus        83 ~~~~~~~--g~iD~lv~~Ag  100 (260)
T 2zat_A           83 AMAVNLH--GGVDILVSNAA  100 (260)
T ss_dssp             HHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence            2222223  26999999887

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.28  E-value=0.014  Score=50.10  Aligned_cols=100  Identities=18%  Similarity=0.340  Sum_probs=62.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH----HHcCCC-EEE--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGAD-VCI--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~----~~~g~~-~~~--~~~~~~-~---  206 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++ .++++..+..    ++.+.. ..+  |-.+.. .   
T Consensus         7 ~~k~vlV----------TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   76 (259)
T 3edm_A            7 TNRTIVV----------AGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAA   76 (259)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            4678999          9999999999999999999999998 4444433332    233432 222  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh------------h---------------HHHhhccccCCCEEEEEecc
Q 019790          207 VARVKEETGGKGVDVILDCMGAS------------Y---------------FQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~  250 (335)
                      .+.+.+..+  ++|++++++|..            .               .+.+++.+.++|+++.++..
T Consensus        77 ~~~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           77 ISAAADKFG--EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             HHHHHHHHC--SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             HHHHHHHhC--CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            222333332  699999988621            0               12344556668899988654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.27  E-value=0.013  Score=50.17  Aligned_cols=78  Identities=21%  Similarity=0.294  Sum_probs=54.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~~----~  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++.++.+.+.    +.+.... +  |-.+...    .
T Consensus        11 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   80 (256)
T 3gaf_A           11 NDAVAIV----------TGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVI   80 (256)
T ss_dssp             TTCEEEE----------CSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            4678999          999999999999988888999999999887665543    3343332 2  3333221    2


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..+  ++|++++++|.
T Consensus        81 ~~~~~~~g--~id~lv~nAg~   99 (256)
T 3gaf_A           81 KAALDQFG--KITVLVNNAGG   99 (256)
T ss_dssp             HHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHcC--CCCEEEECCCC
Confidence            22333332  69999999873

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.27  E-value=0.014  Score=51.21  Aligned_cols=77  Identities=14%  Similarity=0.333  Sum_probs=52.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc----CCCE-EE--eCCCcc-HHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADV-CI--NYKTED-FVA-  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~----g~~~-~~--~~~~~~-~~~-  208 (335)
                      .+.++||          +||+|.+|.+++..+...|++|++++++.++.+.+. ++    +... .+  |-.+.. +.+ 
T Consensus        25 ~~k~vlI----------TGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   94 (302)
T 1w6u_A           25 QGKVAFI----------TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNT   94 (302)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHH
Confidence            4678999          999999999999999999999999999987665432 21    4332 22  333322 211 


Q ss_pred             --HHHHHhCCCcccEEEeCCC
Q 019790          209 --RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 --~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+..  .++|++|.++|
T Consensus        95 ~~~~~~~~--g~id~li~~Ag  113 (302)
T 1w6u_A           95 VSELIKVA--GHPNIVINNAA  113 (302)
T ss_dssp             HHHHHHHT--CSCSEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCC
Confidence              222222  36899999987

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.26  E-value=0.017  Score=46.90  Aligned_cols=97  Identities=19%  Similarity=0.146  Sum_probs=62.8

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC----------CeEEEEecChhhHHHHHHcCCCEEE-eCC-
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG----------VRVFVTAGSEEKLAVCKDLGADVCI-NYK-  202 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g----------~~V~~~~~~~~~~~~~~~~g~~~~~-~~~-  202 (335)
                      ..+.++++||.          .| +|+ |..+..+++..|          .+|++++.++...     ...-..+ ..+ 
T Consensus        18 ~~~~~~~~vLD----------lG-cG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~   80 (196)
T 2nyu_A           18 QILRPGLRVLD----------CG-AAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADV   80 (196)
T ss_dssp             CCCCTTCEEEE----------ET-CCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCT
T ss_pred             CCCCCCCEEEE----------eC-CCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccC
Confidence            44688999998          87 566 888999999876          7899999876421     1111223 222 


Q ss_pred             -CccHHHHHHHHhCCCcccEEEe-----CCCh-------------hhHHHhhccccCCCEEEEEe
Q 019790          203 -TEDFVARVKEETGGKGVDVILD-----CMGA-------------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       203 -~~~~~~~~~~~~~~~~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g  248 (335)
                       +..+...+.+...+..||+|+.     +++.             ..+..+.+.|+++|+++...
T Consensus        81 ~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           81 TDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             TSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence             2223334444455557999994     3332             22456788999999998763

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.26  E-value=0.014  Score=50.82  Aligned_cols=78  Identities=26%  Similarity=0.367  Sum_probs=52.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE---eCCCcc-H---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI---NYKTED-F---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~---~~~~~~-~---  206 (335)
                      ..+.++||          +||++.+|.+++..+...|++|+++++++++.+.+.    +.+....+   |-.+.. +   
T Consensus        22 ~~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~   91 (279)
T 3sju_A           22 SRPQTAFV----------TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAA   91 (279)
T ss_dssp             ---CEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            45678999          999999999999999999999999999988765543    23433322   333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++|+++|
T Consensus        92 ~~~~~~~~g--~id~lv~nAg  110 (279)
T 3sju_A           92 VAAAVERFG--PIGILVNSAG  110 (279)
T ss_dssp             HHHHHHHHC--SCCEEEECCC
T ss_pred             HHHHHHHcC--CCcEEEECCC
Confidence            222333332  6999999987

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.26  E-value=0.011  Score=50.61  Aligned_cols=77  Identities=23%  Similarity=0.317  Sum_probs=53.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-HH---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-FV---ARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~~---~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++.++.+.+. +++.... +  |-.+.. +.   +.+
T Consensus        11 ~~k~vlV----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (265)
T 2o23_A           11 KGLVAVI----------TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALA   80 (265)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999877665443 4443322 2  333322 21   222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++|.++|
T Consensus        81 ~~~~--g~id~li~~Ag   95 (265)
T 2o23_A           81 KGKF--GRVDVAVNCAG   95 (265)
T ss_dssp             HHHH--SCCCEEEECCC
T ss_pred             HHHC--CCCCEEEECCc
Confidence            2222  26999999887

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.26  E-value=0.016  Score=49.14  Aligned_cols=77  Identities=27%  Similarity=0.375  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~-~~--  207 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++ ++++.+.+    +..+.... +  |-.+.. +.  
T Consensus         3 ~~k~vlV----------TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T 2uvd_A            3 KGKVALV----------TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNM   72 (246)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            3578999          999999999999999999999999998 76655443    22343322 2  333322 21  


Q ss_pred             -HHHHHHhCCCcccEEEeCCC
Q 019790          208 -ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+..  .++|++|+++|
T Consensus        73 ~~~~~~~~--g~id~lv~nAg   91 (246)
T 2uvd_A           73 VKQTVDVF--GQVDILVNNAG   91 (246)
T ss_dssp             HHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCC
Confidence             2222223  26999999987

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.25  E-value=0.0074  Score=52.62  Aligned_cols=78  Identities=24%  Similarity=0.381  Sum_probs=52.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-c----CCC-EEE--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GAD-VCI--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~----g~~-~~~--~~~~~~~----  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.+ +    +.. ..+  |-.+.+-    
T Consensus        32 ~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  101 (281)
T 4dry_A           32 EGRIALV----------TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAAL  101 (281)
T ss_dssp             --CEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHH
Confidence            5778999          9999999999999999999999999999877655432 1    222 222  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  .++|++++++|.
T Consensus       102 ~~~~~~~~--g~iD~lvnnAG~  121 (281)
T 4dry_A          102 FAAVRAEF--ARLDLLVNNAGS  121 (281)
T ss_dssp             HHHHHHHH--SCCSEEEECCCC
T ss_pred             HHHHHHHc--CCCCEEEECCCC
Confidence            22333333  268999999873

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.25  E-value=0.012  Score=50.61  Aligned_cols=95  Identities=8%  Similarity=0.070  Sum_probs=68.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~  215 (335)
                      .++.+||.          .| .|. |..+..+++.. |.+|++++.++...+.+++.+.. .....+.....      ..
T Consensus        84 ~~~~~vLd----------iG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~------~~  145 (269)
T 1p91_A           84 DKATAVLD----------IG-CGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP------FS  145 (269)
T ss_dssp             TTCCEEEE----------ET-CTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS------BC
T ss_pred             CCCCEEEE----------EC-CCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC------CC
Confidence            57788888          77 566 99999999987 78999999999999988876543 22222221110      12


Q ss_pred             CCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          216 GKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       216 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ...||+|+.......+..+.+.|+++|+++.....
T Consensus       146 ~~~fD~v~~~~~~~~l~~~~~~L~pgG~l~~~~~~  180 (269)
T 1p91_A          146 DTSMDAIIRIYAPCKAEELARVVKPGGWVITATPG  180 (269)
T ss_dssp             TTCEEEEEEESCCCCHHHHHHHEEEEEEEEEEEEC
T ss_pred             CCceeEEEEeCChhhHHHHHHhcCCCcEEEEEEcC
Confidence            24799999755555688899999999999877543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.24  E-value=0.014  Score=50.44  Aligned_cols=77  Identities=25%  Similarity=0.439  Sum_probs=53.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE---eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI---NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~---~~~~~~-~---~  207 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.    +.+....+   |-.+.. +   .
T Consensus        25 ~gk~~lV----------TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   94 (271)
T 4ibo_A           25 GGRTALV----------TGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAF   94 (271)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887665443    33444332   222222 1   1


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++++++|
T Consensus        95 ~~~~~~~--g~iD~lv~nAg  112 (271)
T 4ibo_A           95 ARLDEQG--IDVDILVNNAG  112 (271)
T ss_dssp             HHHHHHT--CCCCEEEECCC
T ss_pred             HHHHHHC--CCCCEEEECCC
Confidence            2222222  36999999987

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.23  E-value=0.016  Score=50.58  Aligned_cols=77  Identities=22%  Similarity=0.339  Sum_probs=53.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-EE--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~-~---~  207 (335)
                      ++.++||          +||++.+|.++++.+...|++|++++++.++.+.+.+    .+... .+  |-.+.. +   .
T Consensus        27 ~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~   96 (283)
T 3v8b_A           27 PSPVALI----------TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAV   96 (283)
T ss_dssp             CCCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4678999          9999999999999999999999999999887665542    23332 22  333322 1   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++++++|
T Consensus        97 ~~~~~~~g--~iD~lVnnAg  114 (283)
T 3v8b_A           97 RDLVLKFG--HLDIVVANAG  114 (283)
T ss_dssp             HHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHhC--CCCEEEECCC
Confidence            23333332  6999999887

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.23  E-value=0.02  Score=48.85  Aligned_cols=77  Identities=23%  Similarity=0.398  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCE-EE--eCCCcc-HHH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTED-FVA--  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~-~~~--  208 (335)
                      .+.++||          +|++|.+|.+++..+...|++|+++++++++.+.+    +..+... .+  |-.+.. +.+  
T Consensus        12 ~~k~vlI----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   81 (260)
T 3awd_A           12 DNRVAIV----------TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAV   81 (260)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            4678999          99999999999999999999999999987765433    2234332 22  333322 211  


Q ss_pred             -HHHHHhCCCcccEEEeCCC
Q 019790          209 -RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+..  .++|++|.++|
T Consensus        82 ~~~~~~~--~~id~vi~~Ag   99 (260)
T 3awd_A           82 RSVHEQE--GRVDILVACAG   99 (260)
T ss_dssp             HHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence             222222  26899999887

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.23  E-value=0.021  Score=50.10  Aligned_cols=42  Identities=26%  Similarity=0.415  Sum_probs=36.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      .+.++||          +|++|.+|.+++..+...|++|++++++.++.+.+
T Consensus        17 ~~k~vlV----------TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~   58 (303)
T 1yxm_A           17 QGQVAIV----------TGGATGIGKAIVKELLELGSNVVIASRKLERLKSA   58 (303)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4678999          99999999999999999999999999988766543

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.23  E-value=0.03  Score=48.08  Aligned_cols=77  Identities=31%  Similarity=0.492  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcC-CCE-EE--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG-ADV-CI--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g-~~~-~~--~~~~~~~----  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.    +.+ ... .+  |-.+...    
T Consensus         9 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~   78 (262)
T 3pk0_A            9 QGRSVVV----------TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDAL   78 (262)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHH
Confidence            4678999          999999999999999999999999999988765543    233 222 22  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++++++|
T Consensus        79 ~~~~~~~~g--~id~lvnnAg   97 (262)
T 3pk0_A           79 AGRAVEEFG--GIDVVCANAG   97 (262)
T ss_dssp             HHHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHHhC--CCCEEEECCC
Confidence            222333332  6999999987

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.23  E-value=0.011  Score=51.98  Aligned_cols=79  Identities=19%  Similarity=0.275  Sum_probs=53.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC-CE-E--EeCCCc-cH--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DV-C--INYKTE-DF--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~-~~-~--~~~~~~-~~--  206 (335)
                      ..+.++||          +||++++|.++++.+...|++|++++|+.++.+.+.    +.+. .. .  .|-.+. ..  
T Consensus        10 ~~~k~vlI----------TGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~   79 (311)
T 3o26_A           10 TKRRCAVV----------TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMS   79 (311)
T ss_dssp             --CCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHH
T ss_pred             CCCcEEEE----------ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHH
Confidence            35678999          999999999999999999999999999987754432    2222 21 2  243333 22  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 --VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+.+..+  ++|++|+++|.
T Consensus        80 ~~~~~~~~~~g--~iD~lv~nAg~  101 (311)
T 3o26_A           80 SLADFIKTHFG--KLDILVNNAGV  101 (311)
T ss_dssp             HHHHHHHHHHS--SCCEEEECCCC
T ss_pred             HHHHHHHHhCC--CCCEEEECCcc
Confidence              223333332  69999999984

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.22  E-value=0.016  Score=49.89  Aligned_cols=79  Identities=18%  Similarity=0.241  Sum_probs=54.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-H---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-F---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~---  206 (335)
                      -.+.++||          +|+++.+|.++++.+...|++|++++++.++.+.+.    +.+.... +  |-.+.. +   
T Consensus         9 l~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   78 (264)
T 3ucx_A            9 LTDKVVVI----------SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHL   78 (264)
T ss_dssp             TTTCEEEE----------ESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCcEEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            45788999          999999999999999999999999999988765543    2343332 2  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  .++|++|+++|.
T Consensus        79 ~~~~~~~~--g~id~lv~nAg~   98 (264)
T 3ucx_A           79 VDETMKAY--GRVDVVINNAFR   98 (264)
T ss_dssp             HHHHHHHT--SCCSEEEECCCS
T ss_pred             HHHHHHHc--CCCcEEEECCCC
Confidence            22233333  369999998853

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.22  E-value=0.016  Score=50.28  Aligned_cols=76  Identities=20%  Similarity=0.212  Sum_probs=53.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~---~  207 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.    +.+....   .|-.+.. .   .
T Consensus        32 ~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~  101 (275)
T 4imr_A           32 RGRTALV----------TGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLI  101 (275)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Confidence            5688999          999999999999999999999999999876654432    3343322   2333322 2   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+.   .++|++++++|
T Consensus       102 ~~~~~~---g~iD~lvnnAg  118 (275)
T 4imr_A          102 ERAEAI---APVDILVINAS  118 (275)
T ss_dssp             HHHHHH---SCCCEEEECCC
T ss_pred             HHHHHh---CCCCEEEECCC
Confidence            223232   37999999988

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.21  E-value=0.016  Score=50.01  Aligned_cols=77  Identities=22%  Similarity=0.346  Sum_probs=52.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVA--  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~--  208 (335)
                      .+.++||          +|++|.+|.+++..+...|++|+++++++++.+.+.    +.+... .+  |-.+.. +.+  
T Consensus        30 ~~k~vlI----------TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           30 TGEIVLI----------TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887665442    234332 22  333322 212  


Q ss_pred             -HHHHHhCCCcccEEEeCCC
Q 019790          209 -RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+..  .++|++|.++|
T Consensus       100 ~~~~~~~--g~iD~li~~Ag  117 (272)
T 1yb1_A          100 KKVKAEI--GDVSILVNNAG  117 (272)
T ss_dssp             HHHHHHT--CCCSEEEECCC
T ss_pred             HHHHHHC--CCCcEEEECCC
Confidence             222222  26999999987

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.21  E-value=0.017  Score=49.43  Aligned_cols=76  Identities=20%  Similarity=0.306  Sum_probs=51.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HH---H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FV---A  208 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~---~  208 (335)
                      +.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    ..+... .+  |-.+.. +.   +
T Consensus         2 ~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   71 (256)
T 1geg_A            2 KKVALV----------TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVE   71 (256)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            457899          999999999999999999999999999887655442    234332 22  333322 21   2


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++|+++|
T Consensus        72 ~~~~~~--g~id~lv~nAg   88 (256)
T 1geg_A           72 QARKTL--GGFDVIVNNAG   88 (256)
T ss_dssp             HHHHHT--TCCCEEEECCC
T ss_pred             HHHHHh--CCCCEEEECCC
Confidence            222222  26999999887

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.21  E-value=0.012  Score=51.08  Aligned_cols=77  Identities=27%  Similarity=0.436  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC-EEE--eCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~-~---~  207 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.    +.+.. ..+  |-.+.. +   .
T Consensus        31 ~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~  100 (276)
T 3r1i_A           31 SGKRALI----------TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGML  100 (276)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887655443    23322 222  333322 1   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++++++|
T Consensus       101 ~~~~~~~g--~iD~lvnnAg  118 (276)
T 3r1i_A          101 DQMTGELG--GIDIAVCNAG  118 (276)
T ss_dssp             HHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHcC--CCCEEEECCC
Confidence            22333332  6999999887

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.20  E-value=0.021  Score=48.67  Aligned_cols=72  Identities=19%  Similarity=0.336  Sum_probs=48.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE-EE--eCCCccHHHHHHHHhC--CCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFVARVKEETG--GKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~~~~~~~~~--~~~~d~vid~~g  227 (335)
                      +|+++.+|.++++.+...|++|+++++++++.+.+. +++... .+  |-.+....+.+.+...  ..++|++++++|
T Consensus         6 TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg   83 (248)
T 3asu_A            6 TGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAG   83 (248)
T ss_dssp             TTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCC
T ss_pred             ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            999999999999999999999999999988766554 344322 22  3333222222222211  136999999887

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.19  E-value=0.014  Score=50.55  Aligned_cols=77  Identities=19%  Similarity=0.160  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHHH-Hc----CCCEE---EeCCCc----c
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DL----GADVC---INYKTE----D  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~-~~----g~~~~---~~~~~~----~  205 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++ ++++.+.+. ++    +....   .|-.+.    .
T Consensus        10 ~~k~~lV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   79 (276)
T 1mxh_A           10 ECPAAVI----------TGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLD   79 (276)
T ss_dssp             -CCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHH
Confidence            4578999          999999999999999999999999999 776655442 22    43322   233333    2


Q ss_pred             HH----HHHHHHhCCCcccEEEeCCC
Q 019790          206 FV----ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 ~~----~~~~~~~~~~~~d~vid~~g  227 (335)
                      ..    +.+.+..  .++|++|+++|
T Consensus        80 ~~~~~~~~~~~~~--g~id~lv~nAg  103 (276)
T 1mxh_A           80 CCEDIIDCSFRAF--GRCDVLVNNAS  103 (276)
T ss_dssp             HHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHHHHhc--CCCCEEEECCC
Confidence            21    1222222  26999999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.19  E-value=0.024  Score=49.10  Aligned_cols=77  Identities=22%  Similarity=0.340  Sum_probs=53.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCcc-HHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTED-FVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~-~~~~~~~~  213 (335)
                      .+.++||          +||++.+|.++++.+...|++|++++++.++.+.+. +++.... +  |-.+.. +.+.+.+.
T Consensus        29 ~~k~vlV----------TGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           29 EGASAIV----------SGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             TTEEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999988776654 4554332 2  333322 22222222


Q ss_pred             hCCCcccEEEeC
Q 019790          214 TGGKGVDVILDC  225 (335)
Q Consensus       214 ~~~~~~d~vid~  225 (335)
                      ....++|+++.+
T Consensus        99 ~~~~~id~lv~~  110 (281)
T 3ppi_A           99 NQLGRLRYAVVA  110 (281)
T ss_dssp             TTSSEEEEEEEC
T ss_pred             HHhCCCCeEEEc
Confidence            222468999988

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.19  E-value=0.018  Score=49.93  Aligned_cols=77  Identities=22%  Similarity=0.405  Sum_probs=51.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC------------hhhHHH----HHHcCCCEEE---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVCI---  199 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~----~~~~g~~~~~---  199 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++            .++.+.    ++..+....+   
T Consensus         9 ~~k~~lV----------TGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (281)
T 3s55_A            9 EGKTALI----------TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKV   78 (281)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeC
Confidence            4678999          9999999999999999999999999986            333332    2334443322   


Q ss_pred             eCCCcc-H---HHHHHHHhCCCcccEEEeCCC
Q 019790          200 NYKTED-F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       200 ~~~~~~-~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                      |-.+.. +   .+.+.+..+  ++|++++++|
T Consensus        79 Dv~~~~~v~~~~~~~~~~~g--~id~lv~nAg  108 (281)
T 3s55_A           79 DVKDRAALESFVAEAEDTLG--GIDIAITNAG  108 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHT--CCCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHHhcC--CCCEEEECCC
Confidence            333322 1   223333333  6999999887

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.17  E-value=0.018  Score=49.38  Aligned_cols=77  Identities=23%  Similarity=0.314  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHHH----HcCCCEE-E--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADVC-I--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~----~~g~~~~-~--~~~~~~~----  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++ .+++++.+.+.    +.+.... +  |-.+..-    
T Consensus         3 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   72 (258)
T 3oid_A            3 QNKCALV----------TGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEM   72 (258)
T ss_dssp             CCCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            4678999          9999999999999999999999997 77776655443    2343332 2  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++|+++|
T Consensus        73 ~~~~~~~~g--~id~lv~nAg   91 (258)
T 3oid_A           73 FQQIDETFG--RLDVFVNNAA   91 (258)
T ss_dssp             HHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHcC--CCCEEEECCC
Confidence            222333332  6899999987

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.17  E-value=0.019  Score=49.40  Aligned_cols=77  Identities=25%  Similarity=0.320  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcC--CCE-E--EeCCCccHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG--ADV-C--INYKTEDFVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g--~~~-~--~~~~~~~~~~~  209 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+...    +.+  ... .  .|-.+....+.
T Consensus         9 ~~k~~lV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   78 (267)
T 3t4x_A            9 KGKTALV----------TGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQD   78 (267)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHH
Confidence            4678999          999999999999999999999999999987655432    222  211 1  23333333333


Q ss_pred             HHHHhCCCcccEEEeCCC
Q 019790          210 VKEETGGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g  227 (335)
                      +.+..  .++|++++++|
T Consensus        79 ~~~~~--g~id~lv~nAg   94 (267)
T 3t4x_A           79 VIEKY--PKVDILINNLG   94 (267)
T ss_dssp             HHHHC--CCCSEEEECCC
T ss_pred             HHHhc--CCCCEEEECCC
Confidence            33333  36999999987

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.14  E-value=0.014  Score=50.19  Aligned_cols=77  Identities=19%  Similarity=0.287  Sum_probs=53.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC-EEE--eCCCcc-HH---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTED-FV---ARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~-~~---~~~  210 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+.+ +... ..+  |-.+.. +.   +.+
T Consensus        11 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A           11 SGRKAIV----------TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHH
Confidence            4678999          9999999999999999999999999999877665543 3211 222  333322 11   222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++|+++|
T Consensus        81 ~~~~g--~iD~lv~~Ag   95 (263)
T 3ak4_A           81 IDALG--GFDLLCANAG   95 (263)
T ss_dssp             HHHHT--CCCEEEECCC
T ss_pred             HHHcC--CCCEEEECCC
Confidence            22232  6999999987

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.14  E-value=0.003  Score=50.58  Aligned_cols=100  Identities=20%  Similarity=0.218  Sum_probs=67.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~  205 (335)
                      ....+.++++||.          .| +| .|..+..+++.. +.+|++++.+++..+.+++    .+..  ..+..+...
T Consensus        19 ~~~~~~~~~~vld----------iG-~G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~   86 (178)
T 3hm2_A           19 SALAPKPHETLWD----------IG-GG-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR   86 (178)
T ss_dssp             HHHCCCTTEEEEE----------ES-TT-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG
T ss_pred             HHhcccCCCeEEE----------eC-CC-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh
Confidence            4456788889998          77 45 488999999987 6799999999988877764    3433  223222211


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh---hHHHhhccccCCCEEEEEec
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS---YFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~  249 (335)
                         .+..  ....||+|+......   .+..+.+.|+++|+++....
T Consensus        87 ---~~~~--~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           87 ---AFDD--VPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             ---GGGG--CCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             ---hhhc--cCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence               1111  114799999765443   46888999999999987643

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.14  E-value=0.0038  Score=54.97  Aligned_cols=100  Identities=21%  Similarity=0.164  Sum_probs=69.7

Q ss_pred             HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC--E-EEeCC
Q 019790          130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--V-CINYK  202 (335)
Q Consensus       130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~--~-~~~~~  202 (335)
                      .+....+++++.+||-          .| +| .|..+..+++..|++|++++.+++..+.+++    .+..  . +...+
T Consensus        63 ~~~~~~~~~~~~~vLD----------iG-cG-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d  130 (302)
T 3hem_A           63 LALDKLNLEPGMTLLD----------IG-CG-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG  130 (302)
T ss_dssp             HHHHTTCCCTTCEEEE----------ET-CT-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC
T ss_pred             HHHHHcCCCCcCEEEE----------ee-cc-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC
Confidence            3446667889999998          87 34 5889999999989999999999998877764    2322  1 22222


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCCh----------------hhHHHhhccccCCCEEEEEecc
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ..       +.  ...||+|+....-                ..+..+.+.|+|+|+++.....
T Consensus       131 ~~-------~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          131 WE-------EF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             GG-------GC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             HH-------Hc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            11       11  3579999864321                2357788999999999876543

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.13  E-value=0.013  Score=49.98  Aligned_cols=100  Identities=13%  Similarity=0.117  Sum_probs=65.0

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVAR  209 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~  209 (335)
                      .+.++.+||-          .|  ++.|..+..+++.+  +.+|+.++.+++..+.+++    .+...-+.....+..+.
T Consensus        60 ~~~~~~~VLd----------iG--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~  127 (248)
T 3tfw_A           60 RLTQAKRILE----------IG--TLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQS  127 (248)
T ss_dssp             HHHTCSEEEE----------EC--CTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred             hhcCCCEEEE----------ec--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence            4456788888          77  34588888999987  5799999999988877764    34321011112333333


Q ss_pred             HHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790          210 VKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (335)
                      +........||+|+-....    ..+..+.+.|+++|.++.-
T Consensus       128 l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~  169 (248)
T 3tfw_A          128 LESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGD  169 (248)
T ss_dssp             HHTCCSCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             HHhcCCCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            3333223479999943333    2357788999999988764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.13  E-value=0.005  Score=52.03  Aligned_cols=97  Identities=14%  Similarity=0.176  Sum_probs=63.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      .++||          +|++|.+|.++++.+...| ++|++++|++++.+.+...+.. ++..+-.+ .+.+.+...  ++
T Consensus        24 k~vlV----------tGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~d-~~~~~~~~~--~~   89 (236)
T 3qvo_A           24 KNVLI----------LGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQ-IIMGDVLN-HAALKQAMQ--GQ   89 (236)
T ss_dssp             EEEEE----------ETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEE-EEECCTTC-HHHHHHHHT--TC
T ss_pred             cEEEE----------EeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcE-EEEecCCC-HHHHHHHhc--CC
Confidence            57999          9999999999999999999 8999999988765432221221 22222122 234444443  58


Q ss_pred             cEEEeCCChhhH----HHhhccccC--CCEEEEEeccC
Q 019790          220 DVILDCMGASYF----QRNLGSLNI--DGRLFIIGTQG  251 (335)
Q Consensus       220 d~vid~~g~~~~----~~~~~~l~~--~G~~v~~g~~~  251 (335)
                      |++|.+++....    ..+++.++.  .++|+.++...
T Consensus        90 D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           90 DIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             SEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            999999886432    334555543  36898887644

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.13  E-value=0.0075  Score=51.69  Aligned_cols=77  Identities=27%  Similarity=0.345  Sum_probs=48.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EEE--eCCCcc-H---HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTED-F---VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~-~---~~~~  210 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+... +++.. ..+  |-.+.. .   .+.+
T Consensus         6 ~~k~~lV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   75 (257)
T 3tpc_A            6 KSRVFIV----------TGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFA   75 (257)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999877655443 33322 222  333322 1   2223


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++++++|
T Consensus        76 ~~~~g--~id~lv~nAg   90 (257)
T 3tpc_A           76 KQEFG--HVHGLVNCAG   90 (257)
T ss_dssp             HHHHS--CCCEEEECCC
T ss_pred             HHHcC--CCCEEEECCC
Confidence            33332  6999999887

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.12  E-value=0.02  Score=48.68  Aligned_cols=77  Identities=19%  Similarity=0.292  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-HHH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-FVA--  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~~~--  208 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+++++++++.+.+.    ..+.... +  |-.+.. +.+  
T Consensus        10 ~~~~vlV----------tGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   79 (255)
T 1fmc_A           10 DGKCAII----------TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHH
Confidence            4678999          999999999999999999999999999887654432    2343322 2  333322 111  


Q ss_pred             -HHHHHhCCCcccEEEeCCC
Q 019790          209 -RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+..  .++|++|.++|
T Consensus        80 ~~~~~~~--~~~d~vi~~Ag   97 (255)
T 1fmc_A           80 DFAISKL--GKVDILVNNAG   97 (255)
T ss_dssp             HHHHHHH--SSCCEEEECCC
T ss_pred             HHHHHhc--CCCCEEEECCC
Confidence             122222  26999999887

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.12  E-value=0.014  Score=48.58  Aligned_cols=96  Identities=15%  Similarity=0.266  Sum_probs=61.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|||          +|++|.+|..+++.+...|.+|++++|++++...+. .+. ..+..+-.+ .+.+.+...  ++|
T Consensus         5 ~~ilI----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~-~~~~~Dl~d-~~~~~~~~~--~~d   69 (227)
T 3dhn_A            5 KKIVL----------IGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHL-KVKKADVSS-LDEVCEVCK--GAD   69 (227)
T ss_dssp             CEEEE----------ETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTE-EEECCCTTC-HHHHHHHHT--TCS
T ss_pred             CEEEE----------EcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-Cce-EEEEecCCC-HHHHHHHhc--CCC
Confidence            47999          999999999999999999999999999876543221 111 122211122 234455443  589


Q ss_pred             EEEeCCChh------------hHHHhhccccCC--CEEEEEeccC
Q 019790          221 VILDCMGAS------------YFQRNLGSLNID--GRLFIIGTQG  251 (335)
Q Consensus       221 ~vid~~g~~------------~~~~~~~~l~~~--G~~v~~g~~~  251 (335)
                      +||.++|..            .....++.+...  ++++.++...
T Consensus        70 ~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           70 AVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             EEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             EEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            999998753            112334444433  4888887544

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.12  E-value=0.02  Score=49.22  Aligned_cols=77  Identities=17%  Similarity=0.254  Sum_probs=52.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHHHHcCCCEE-EeCCCcc-H---HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTED-F---VARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~-~---~~~~~~  212 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++. +.+++.+...+ .|-.+.. +   .+.+.+
T Consensus        26 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           26 SSAPILI----------TGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -CCCEEE----------SSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHH
Confidence            4578999          99999999999999999999999999987653 34445554322 2333322 1   222222


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      ..  .++|++++++|
T Consensus        96 ~~--g~iD~lv~nAg  108 (260)
T 3gem_A           96 QT--SSLRAVVHNAS  108 (260)
T ss_dssp             HC--SCCSEEEECCC
T ss_pred             hc--CCCCEEEECCC
Confidence            22  36999999987

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.12  E-value=0.017  Score=50.03  Aligned_cols=78  Identities=23%  Similarity=0.248  Sum_probs=53.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC-EE--EeCCCccH----
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VC--INYKTEDF----  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~-~~--~~~~~~~~----  206 (335)
                      -.+.++||          +||++.+|.+++..+...|++|+++.+++++.+.+.    +.+.. ..  .|-.+...    
T Consensus        26 l~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   95 (270)
T 3ftp_A           26 LDKQVAIV----------TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDAL   95 (270)
T ss_dssp             TTTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHH
Confidence            35678999          999999999999999999999999999987665443    23322 22  23333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++|+++|
T Consensus        96 ~~~~~~~~g--~iD~lvnnAg  114 (270)
T 3ftp_A           96 VESTLKEFG--ALNVLVNNAG  114 (270)
T ss_dssp             HHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHcC--CCCEEEECCC
Confidence            222333332  6999999987

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.11  E-value=0.017  Score=48.56  Aligned_cols=76  Identities=22%  Similarity=0.393  Sum_probs=52.6

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE--eCCCcc-HH---HHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTED-FV---ARVKE  212 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~-~~---~~~~~  212 (335)
                      +.++||          +||+|.+|..++..+...|++|++++++.++.+.+. ++.....+  |-.+.. +.   +.+.+
T Consensus         5 ~k~vlV----------tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (234)
T 2ehd_A            5 KGAVLI----------TGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEE   74 (234)
T ss_dssp             CCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHH
Confidence            457999          999999999999999999999999999988766554 33322333  333322 11   22222


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      ..  .++|++|+++|
T Consensus        75 ~~--~~id~li~~Ag   87 (234)
T 2ehd_A           75 AF--GELSALVNNAG   87 (234)
T ss_dssp             HH--SCCCEEEECCC
T ss_pred             Hc--CCCCEEEECCC
Confidence            22  26899999987

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.11  E-value=0.036  Score=47.35  Aligned_cols=76  Identities=25%  Similarity=0.321  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCcc-HH---HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTED-FV---ARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~---~~~~~  212 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+..+++.. ..+  |-.+.. +.   +.+.+
T Consensus         5 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            5 AGKGVLV----------TGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHH
Confidence            4678999          9999999999999999999999999998776333334432 333  333322 22   22222


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      ..  .++|++|+++|
T Consensus        74 ~~--g~iD~lv~~Ag   86 (256)
T 2d1y_A           74 AL--GRVDVLVNNAA   86 (256)
T ss_dssp             HH--SCCCEEEECCC
T ss_pred             Hc--CCCCEEEECCC
Confidence            22  26899999987

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.11  E-value=0.028  Score=48.12  Aligned_cols=79  Identities=22%  Similarity=0.274  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.    ..+... .+  |-.+.. +...+
T Consensus         4 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (260)
T 2qq5_A            4 NGQVCVV----------TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLF   73 (260)
T ss_dssp             TTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHH
Confidence            3678999          999999999999999999999999999887665443    223322 22  333322 22222


Q ss_pred             HHHhC--CCcccEEEeCCC
Q 019790          211 KEETG--GKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~--~~~~d~vid~~g  227 (335)
                      .+...  ..++|++++++|
T Consensus        74 ~~~~~~~~g~id~lvnnAg   92 (260)
T 2qq5_A           74 EQVDREQQGRLDVLVNNAY   92 (260)
T ss_dssp             HHHHHHHTTCCCEEEECCC
T ss_pred             HHHHHhcCCCceEEEECCc
Confidence            22210  236899999994

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.11  E-value=0.015  Score=49.85  Aligned_cols=77  Identities=19%  Similarity=0.350  Sum_probs=52.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC-EE--EeCCCcc-HH---HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VC--INYKTED-FV---ARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~-~~--~~~~~~~-~~---~~~  210 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. ++... ..  .|-.+.. +.   +.+
T Consensus         6 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   75 (260)
T 1nff_A            6 TGKVALV----------SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTA   75 (260)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHH
Confidence            4678999          999999999999999999999999999987766543 33221 12  2333322 11   222


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++|+++|
T Consensus        76 ~~~~g--~iD~lv~~Ag   90 (260)
T 1nff_A           76 VTAFG--GLHVLVNNAG   90 (260)
T ss_dssp             HHHHS--CCCEEEECCC
T ss_pred             HHHcC--CCCEEEECCC
Confidence            22232  6999999987

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.10  E-value=0.026  Score=49.52  Aligned_cols=78  Identities=17%  Similarity=0.245  Sum_probs=52.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC------------hhhHHH----HHHcCCCEEE--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAV----CKDLGADVCI--  199 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~----~~~~g~~~~~--  199 (335)
                      -.+.++||          +||++++|.++++.+...|++|++++++            .++.+.    ++..+.....  
T Consensus        26 l~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (299)
T 3t7c_A           26 VEGKVAFI----------TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQ   95 (299)
T ss_dssp             TTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEE
Confidence            35778999          9999999999999999999999999876            444333    2344543322  


Q ss_pred             -eCCCcc-H---HHHHHHHhCCCcccEEEeCCC
Q 019790          200 -NYKTED-F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       200 -~~~~~~-~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                       |-.+.. +   .+.+.+..  .++|++|+++|
T Consensus        96 ~Dv~~~~~v~~~~~~~~~~~--g~iD~lv~nAg  126 (299)
T 3t7c_A           96 VDVRDFDAMQAAVDDGVTQL--GRLDIVLANAA  126 (299)
T ss_dssp             CCTTCHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred             CCCCCHHHHHHHHHHHHHHh--CCCCEEEECCC
Confidence             333322 1   22223333  26999999887

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.09  E-value=0.017  Score=47.96  Aligned_cols=92  Identities=14%  Similarity=0.128  Sum_probs=63.0

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCccc
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      +|||          +|++|.+|..++..+...|.+|++++|++++...+...+...+ .|..+...     +..  .++|
T Consensus         2 kilV----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-----~~~--~~~d   64 (224)
T 3h2s_A            2 KIAV----------LGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-----ADL--DSVD   64 (224)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-----HHH--TTCS
T ss_pred             EEEE----------EcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH-----hhc--ccCC
Confidence            5889          9999999999999999999999999999887766543344332 13222222     222  3689


Q ss_pred             EEEeCCChh-----------hHHHhhccccC-CCEEEEEecc
Q 019790          221 VILDCMGAS-----------YFQRNLGSLNI-DGRLFIIGTQ  250 (335)
Q Consensus       221 ~vid~~g~~-----------~~~~~~~~l~~-~G~~v~~g~~  250 (335)
                      +||.++|..           .....++.++. +++++.++..
T Consensus        65 ~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           65 AVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             EEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             EEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence            999999762           12344555543 4788888543

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.09  E-value=0.049  Score=44.60  Aligned_cols=142  Identities=14%  Similarity=0.188  Sum_probs=81.8

Q ss_pred             CCCCCEEEEecCCcceeeEEE-ecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeecccccccccc
Q 019790           79 WKVGDQVCALLGGGGYAEKVA-VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG  157 (335)
Q Consensus        79 ~~~Gd~V~~~~~~g~~~~~~~-~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g  157 (335)
                      +..|+.+...   -.|.+|.. .+....+.+++.+.+..+.-  .........+..  .+.++.+||-          .|
T Consensus         6 ~~~~~~~~~~---p~w~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~l~~--~~~~~~~vLD----------iG   68 (205)
T 3grz_A            6 INLSRHLAIV---PEWEDYQPVFKDQEIIRLDPGLAFGTGNH--QTTQLAMLGIER--AMVKPLTVAD----------VG   68 (205)
T ss_dssp             EEEETTEEEE---ETTCCCCCSSTTCEEEEESCC-----CCH--HHHHHHHHHHHH--HCSSCCEEEE----------ET
T ss_pred             EEECCcEEEe---ccccccccCCCCceeEEecCCcccCCCCC--ccHHHHHHHHHH--hccCCCEEEE----------EC
Confidence            4455555444   34666666 56677777877766655421  111111112211  2567888888          76


Q ss_pred             ccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCCC--EEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          158 GSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                       +|. |..+..+++. +. +|++++.++...+.+++    .+..  .++..+...       .. ...||+|+.+.....
T Consensus        69 -~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-------~~-~~~fD~i~~~~~~~~  137 (205)
T 3grz_A           69 -TGS-GILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA-------DV-DGKFDLIVANILAEI  137 (205)
T ss_dssp             -CTT-SHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT-------TC-CSCEEEEEEESCHHH
T ss_pred             -CCC-CHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc-------cC-CCCceEEEECCcHHH
Confidence             343 7777777764 55 99999999988777764    2432  233322221       11 247999998766543


Q ss_pred             ----HHHhhccccCCCEEEEEe
Q 019790          231 ----FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       231 ----~~~~~~~l~~~G~~v~~g  248 (335)
                          +..+.+.|+++|+++...
T Consensus       138 ~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A          138 LLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             HHHHGGGSGGGEEEEEEEEEEE
T ss_pred             HHHHHHHHHHhcCCCCEEEEEe
Confidence                345677889999998754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.09  E-value=0.02  Score=50.91  Aligned_cols=78  Identities=24%  Similarity=0.343  Sum_probs=51.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC----------hhhHHH----HHHcCCCEEE---e
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----------EEKLAV----CKDLGADVCI---N  200 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~----------~~~~~~----~~~~g~~~~~---~  200 (335)
                      -.+.++||          +||++.+|.+++..+...|++|++++++          .++.+.    +.+.+.....   |
T Consensus        25 l~gk~vlV----------TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   94 (322)
T 3qlj_A           25 VDGRVVIV----------TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSN   94 (322)
T ss_dssp             TTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCC
T ss_pred             cCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECC
Confidence            35788999          9999999999999999999999999876          333322    3334443322   2


Q ss_pred             CCCcc-H---HHHHHHHhCCCcccEEEeCCC
Q 019790          201 YKTED-F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       201 ~~~~~-~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                      -.+.. +   .+.+.+..+  ++|++|+++|
T Consensus        95 v~d~~~v~~~~~~~~~~~g--~iD~lv~nAg  123 (322)
T 3qlj_A           95 VADWDQAAGLIQTAVETFG--GLDVLVNNAG  123 (322)
T ss_dssp             TTSHHHHHHHHHHHHHHHS--CCCEEECCCC
T ss_pred             CCCHHHHHHHHHHHHHHcC--CCCEEEECCC
Confidence            22211 1   222333332  6999999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.09  E-value=0.026  Score=48.89  Aligned_cols=77  Identities=32%  Similarity=0.415  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--CEE-E--eCCCcc-HH---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVC-I--NYKTED-FV---A  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~~~-~--~~~~~~-~~---~  208 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. ++..  ... +  |-.+.. +.   +
T Consensus        28 ~~k~vlV----------TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           28 AGRIALV----------TGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHH
Confidence            4678999          999999999999999999999999999987665443 2211  221 2  222222 11   2


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++|+++|
T Consensus        98 ~~~~~~--g~iD~lvnnAg  114 (276)
T 2b4q_A           98 ALGELS--ARLDILVNNAG  114 (276)
T ss_dssp             HHHHHC--SCCSEEEECCC
T ss_pred             HHHHhc--CCCCEEEECCC
Confidence            222222  36999999987

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.09  E-value=0.019  Score=49.04  Aligned_cols=77  Identities=25%  Similarity=0.332  Sum_probs=50.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHHHcCCCEE-E--eCCCcc-HH---HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVC-I--NYKTED-FV---AR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~g~~~~-~--~~~~~~-~~---~~  209 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++  .+.+++.+.... +  |-.+.. +.   +.
T Consensus         3 ~~k~vlV----------TGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~   72 (255)
T 2q2v_A            3 KGKTALV----------TGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFAL   72 (255)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence            3578999          9999999999999999999999999987651  222333343332 2  322222 11   22


Q ss_pred             HHHHhCCCcccEEEeCCC
Q 019790          210 VKEETGGKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g  227 (335)
                      +.+..  .++|++|+++|
T Consensus        73 ~~~~~--g~id~lv~~Ag   88 (255)
T 2q2v_A           73 AEREF--GGVDILVNNAG   88 (255)
T ss_dssp             HHHHH--SSCSEEEECCC
T ss_pred             HHHHc--CCCCEEEECCC
Confidence            22222  26999999987

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.08  E-value=0.019  Score=49.05  Aligned_cols=77  Identities=18%  Similarity=0.340  Sum_probs=50.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHHH----HcCCCE-EE--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK----DLGADV-CI--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~----~~g~~~-~~--~~~~~~-~~--  207 (335)
                      .+.++||          +|++|.+|.+++..+...|++|+++++ ++++.+.+.    ..+... .+  |-.+.. +.  
T Consensus         6 ~~k~vlI----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   75 (261)
T 1gee_A            6 EGKVVVI----------TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            3578999          999999999999999999999999998 766554332    233322 22  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCC
Q 019790          208 -ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+..  .++|++|.++|
T Consensus        76 ~~~~~~~~--g~id~li~~Ag   94 (261)
T 1gee_A           76 VQSAIKEF--GKLDVMINNAG   94 (261)
T ss_dssp             HHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCC
Confidence             2222222  26899999887

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.06  E-value=0.012  Score=52.98  Aligned_cols=77  Identities=18%  Similarity=0.401  Sum_probs=53.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-----------HHHHHHcCCCEE---EeCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----------LAVCKDLGADVC---INYKTE  204 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-----------~~~~~~~g~~~~---~~~~~~  204 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++++           .+.++..+....   .|-.+.
T Consensus        44 ~gk~vlV----------TGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~  113 (346)
T 3kvo_A           44 AGCTVFI----------TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDE  113 (346)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCH
T ss_pred             CCCEEEE----------eCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCH
Confidence            5788999          9999999999999999999999999988653           233344454322   233332


Q ss_pred             cH----HHHHHHHhCCCcccEEEeCCC
Q 019790          205 DF----VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       205 ~~----~~~~~~~~~~~~~d~vid~~g  227 (335)
                      ..    .+.+.+..+  ++|++|+++|
T Consensus       114 ~~v~~~~~~~~~~~g--~iDilVnnAG  138 (346)
T 3kvo_A          114 QQISAAVEKAIKKFG--GIDILVNNAS  138 (346)
T ss_dssp             HHHHHHHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCC
Confidence            21    223333333  6999999988

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.06  E-value=0.048  Score=44.64  Aligned_cols=99  Identities=11%  Similarity=0.082  Sum_probs=67.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~  205 (335)
                      ....+.++++||-          .| +| .|..+..+++.. +.+|++++.+++..+.+++    .+.+  .++..+...
T Consensus        34 ~~l~~~~~~~vLD----------iG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~  101 (204)
T 3e05_A           34 SKLRLQDDLVMWD----------IG-AG-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE  101 (204)
T ss_dssp             HHTTCCTTCEEEE----------ET-CT-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT
T ss_pred             HHcCCCCCCEEEE----------EC-CC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh
Confidence            5567889999998          77 44 488888888886 3799999999998877764    3332  222222211


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEEec
Q 019790          206 FVARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .   +   .....||+|+.....    ..+..+.+.|+++|+++....
T Consensus       102 ~---~---~~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          102 G---L---DDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             T---C---TTSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             h---h---hcCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            1   1   111469999987652    346778899999999988643

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.06  E-value=0.04  Score=48.24  Aligned_cols=77  Identities=29%  Similarity=0.403  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H---cC-CCE-EE--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LG-ADV-CI--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~---~g-~~~-~~--~~~~~~~----  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+. +   .+ ... .+  |-.+...    
T Consensus        40 ~~k~vlV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~  109 (293)
T 3rih_A           40 SARSVLV----------TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADA  109 (293)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHH
Confidence            5678999          999999999999999999999999999987765543 2   22 122 22  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++|+++|
T Consensus       110 ~~~~~~~~g--~iD~lvnnAg  128 (293)
T 3rih_A          110 ARTVVDAFG--ALDVVCANAG  128 (293)
T ss_dssp             HHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHcC--CCCEEEECCC
Confidence            223333333  6899999887

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.06  E-value=0.021  Score=49.36  Aligned_cols=78  Identities=18%  Similarity=0.366  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC------------hhhHHHH----HHcCCCEEE---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADVCI---  199 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~----~~~g~~~~~---  199 (335)
                      .+.++||          +|+++.+|.+++..+...|++|++++++            .++.+..    +..+....+   
T Consensus        12 ~gk~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (278)
T 3sx2_A           12 TGKVAFI----------TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQA   81 (278)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeC
Confidence            5678999          9999999999999999999999999876            4444332    234443322   


Q ss_pred             eCCCcc-H---HHHHHHHhCCCcccEEEeCCCh
Q 019790          200 NYKTED-F---VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       200 ~~~~~~-~---~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      |-.+.. +   .+.+.+..+  ++|++|+++|.
T Consensus        82 D~~~~~~v~~~~~~~~~~~g--~id~lv~nAg~  112 (278)
T 3sx2_A           82 DVRDRESLSAALQAGLDELG--RLDIVVANAGI  112 (278)
T ss_dssp             CTTCHHHHHHHHHHHHHHHC--CCCEEEECCCC
T ss_pred             CCCCHHHHHHHHHHHHHHcC--CCCEEEECCCC
Confidence            333322 1   222233332  69999999873

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.05  E-value=0.0057  Score=51.68  Aligned_cols=99  Identities=24%  Similarity=0.239  Sum_probs=66.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCccHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFV  207 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~  207 (335)
                      ....+.++++||.          .| +| .|..+..+++..+.+|++++.+++..+.+++    .+.. ..+...  +..
T Consensus        85 ~~l~~~~~~~vLd----------iG-~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~--d~~  150 (235)
T 1jg1_A           85 EIANLKPGMNILE----------VG-TG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG--DGS  150 (235)
T ss_dssp             HHHTCCTTCCEEE----------EC-CT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGG
T ss_pred             HhcCCCCCCEEEE----------Ee-CC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEC--Ccc
Confidence            4457788999998          77 44 7888889998877899999999888777754    3432 111111  110


Q ss_pred             HHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          208 ARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                         .......+||+|+.+.+... ...+.+.|+++|+++..-
T Consensus       151 ---~~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          151 ---KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             ---GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence               01111235999998766543 357788999999987653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.04  E-value=0.02  Score=49.58  Aligned_cols=78  Identities=17%  Similarity=0.336  Sum_probs=53.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H----cCCCEE-E--eCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADVC-I--NYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~----~g~~~~-~--~~~~~~-~--  206 (335)
                      -.+.++||          +||++.+|.++++.+...|++|++++++.++.+... +    .+.... +  |-.+.. .  
T Consensus        25 l~~k~~lV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   94 (277)
T 4fc7_A           25 LRDKVAFI----------TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMA   94 (277)
T ss_dssp             TTTCEEEE----------ETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            35788999          999999999999999999999999999987654432 1    243322 2  333322 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..  .++|++++++|
T Consensus        95 ~~~~~~~~~--g~id~lv~nAg  114 (277)
T 4fc7_A           95 AVDQALKEF--GRIDILINCAA  114 (277)
T ss_dssp             HHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHc--CCCCEEEECCc
Confidence             22333333  26999999987

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.02  E-value=0.031  Score=48.39  Aligned_cols=78  Identities=15%  Similarity=0.218  Sum_probs=51.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-------------ChhhHHHH----HHcCCCEEE-
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-------------SEEKLAVC----KDLGADVCI-  199 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-------------~~~~~~~~----~~~g~~~~~-  199 (335)
                      -.+.++||          +|+++.+|.++++.+...|++|+++++             +.++.+..    ...+..... 
T Consensus         9 l~~k~~lV----------TGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (277)
T 3tsc_A            9 LEGRVAFI----------TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAA   78 (277)
T ss_dssp             TTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cCCCEEEE----------ECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEE
Confidence            35678999          999999999999999999999999987             44444333    233433322 


Q ss_pred             --eCCCcc-H---HHHHHHHhCCCcccEEEeCCC
Q 019790          200 --NYKTED-F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       200 --~~~~~~-~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                        |-.+.. +   .+.+.+..  .++|++++++|
T Consensus        79 ~~D~~~~~~v~~~~~~~~~~~--g~id~lvnnAg  110 (277)
T 3tsc_A           79 VVDTRDFDRLRKVVDDGVAAL--GRLDIIVANAG  110 (277)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred             ECCCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence              333322 1   22222233  36999999987

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.02  E-value=0.013  Score=51.16  Aligned_cols=77  Identities=27%  Similarity=0.457  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-----------HHHHHHcCCCEE-E--eCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-----------LAVCKDLGADVC-I--NYKTE  204 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-----------~~~~~~~g~~~~-~--~~~~~  204 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++.++           .+.++..+.... +  |-.+.
T Consensus         8 ~~k~vlV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   77 (285)
T 3sc4_A            8 RGKTMFI----------SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDG   77 (285)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            4678999          9999999999999999999999999988652           223334443322 2  33332


Q ss_pred             c----HHHHHHHHhCCCcccEEEeCCC
Q 019790          205 D----FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       205 ~----~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .    +.+.+.+..+  ++|++|+++|
T Consensus        78 ~~v~~~~~~~~~~~g--~id~lvnnAg  102 (285)
T 3sc4_A           78 DAVAAAVAKTVEQFG--GIDICVNNAS  102 (285)
T ss_dssp             HHHHHHHHHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCC
Confidence            2    1223333333  6999999987

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.01  E-value=0.0079  Score=50.93  Aligned_cols=100  Identities=17%  Similarity=0.181  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVAR  209 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~  209 (335)
                      ...++.+||.          .| +| .|..+..+++..  +.+|++++.+++..+.+++    .+....+.....+..+.
T Consensus        57 ~~~~~~~VLd----------iG-~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~  124 (239)
T 2hnk_A           57 KISGAKRIIE----------IG-TF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALET  124 (239)
T ss_dssp             HHHTCSEEEE----------EC-CT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred             HhhCcCEEEE----------Ee-CC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHH
Confidence            4457788988          77 34 688899999987  5799999999988777764    24321011111233332


Q ss_pred             HHHHhC-------------C-CcccEEEeCCChh----hHHHhhccccCCCEEEEE
Q 019790          210 VKEETG-------------G-KGVDVILDCMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~-------------~-~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      +.+...             + ..||+|+...+..    .+..+.+.|+++|.++..
T Consensus       125 ~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  180 (239)
T 2hnk_A          125 LQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIAD  180 (239)
T ss_dssp             HHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            332211             1 4799999876643    246778999999999864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.01  E-value=0.024  Score=49.32  Aligned_cols=79  Identities=16%  Similarity=0.247  Sum_probs=51.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE-E--eCCCcc-HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC-I--NYKTED-FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~~~~~  210 (335)
                      .+.++||          +||+|.+|.+++..+...|++|+++.+++++.+.+.    +.+.... +  |-.+.. +.+.+
T Consensus        43 ~~k~vlI----------TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~  112 (285)
T 2c07_A           43 ENKVALV----------TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI  112 (285)
T ss_dssp             SSCEEEE----------ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHH
Confidence            3578999          999999999999999999999999888877655432    2243322 2  333322 22222


Q ss_pred             HHHh-CCCcccEEEeCCC
Q 019790          211 KEET-GGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~-~~~~~d~vid~~g  227 (335)
                      .+.. ...++|++|.++|
T Consensus       113 ~~~~~~~~~id~li~~Ag  130 (285)
T 2c07_A          113 NKILTEHKNVDILVNNAG  130 (285)
T ss_dssp             HHHHHHCSCCCEEEECCC
T ss_pred             HHHHHhcCCCCEEEECCC
Confidence            1110 1136999999887

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.01  E-value=0.012  Score=52.20  Aligned_cols=77  Identities=18%  Similarity=0.364  Sum_probs=53.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC--C-EE--EeCCCcc-H--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA--D-VC--INYKTED-F--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~--~-~~--~~~~~~~-~--  206 (335)
                      .+.++||          +|++|.+|.+++..+...|++|++++++.++.+.+.    ..+.  . ..  .|-.+.. +  
T Consensus         7 ~~k~vlV----------TGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~   76 (319)
T 3ioy_A            7 AGRTAFV----------TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKM   76 (319)
T ss_dssp             TTCEEEE----------ETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHH
T ss_pred             CCCEEEE----------cCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHH
Confidence            4678999          999999999999999999999999999988765543    2232  2 22  2333322 2  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..  .++|++|+++|
T Consensus        77 ~~~~~~~~~--g~id~lv~nAg   96 (319)
T 3ioy_A           77 AADEVEARF--GPVSILCNNAG   96 (319)
T ss_dssp             HHHHHHHHT--CCEEEEEECCC
T ss_pred             HHHHHHHhC--CCCCEEEECCC
Confidence             22222222  36899999998

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.00  E-value=0.032  Score=47.26  Aligned_cols=77  Identities=18%  Similarity=0.308  Sum_probs=52.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcC--CC-EEE--eCCCcc-HH---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--AD-VCI--NYKTED-FV---A  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g--~~-~~~--~~~~~~-~~---~  208 (335)
                      .+.++||          +|++|.+|.++++.+...|++|+++++++++.+.+. ++.  .. ..+  |..+.. +.   +
T Consensus         5 ~~k~vlV----------tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (251)
T 1zk4_A            5 DGKVAII----------TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCcEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHH
Confidence            4678999          999999999999999999999999999887665543 232  11 222  333322 21   2


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++|.++|
T Consensus        75 ~~~~~~--~~id~li~~Ag   91 (251)
T 1zk4_A           75 ATEKAF--GPVSTLVNNAG   91 (251)
T ss_dssp             HHHHHH--SSCCEEEECCC
T ss_pred             HHHHHh--CCCCEEEECCC
Confidence            222222  26899999887

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.99  E-value=0.023  Score=49.31  Aligned_cols=77  Identities=23%  Similarity=0.382  Sum_probs=52.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H---cCC---C-EEE--eCCCcc-H-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGA---D-VCI--NYKTED-F-  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~---~g~---~-~~~--~~~~~~-~-  206 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+. +   .+.   . ..+  |-.+.. + 
T Consensus         5 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   74 (280)
T 1xkq_A            5 SNKTVII----------TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQD   74 (280)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHH
Confidence            4678999          999999999999999999999999999987765543 2   222   2 222  333322 1 


Q ss_pred             --HHHHHHHhCCCcccEEEeCCC
Q 019790          207 --VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+.+..  .++|++|+++|
T Consensus        75 ~~~~~~~~~~--g~iD~lv~nAg   95 (280)
T 1xkq_A           75 QIINSTLKQF--GKIDVLVNNAG   95 (280)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHhc--CCCCEEEECCC
Confidence              12222233  26999999887

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.98  E-value=0.026  Score=49.98  Aligned_cols=78  Identities=15%  Similarity=0.247  Sum_probs=51.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC------------hhhHHHH----HHcCCCEEE--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS------------EEKLAVC----KDLGADVCI--  199 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~------------~~~~~~~----~~~g~~~~~--  199 (335)
                      -.+.++||          +|+++.+|.++++.+...|++|++++++            .++.+..    ++.+....+  
T Consensus        44 l~gk~~lV----------TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (317)
T 3oec_A           44 LQGKVAFI----------TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQ  113 (317)
T ss_dssp             TTTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             cCCCEEEE----------eCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEE
Confidence            35788999          9999999999999999999999999765            4433332    334443322  


Q ss_pred             -eCCCcc-H---HHHHHHHhCCCcccEEEeCCC
Q 019790          200 -NYKTED-F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       200 -~~~~~~-~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                       |-.+.. +   .+.+.+..  .++|++|+++|
T Consensus       114 ~Dv~d~~~v~~~~~~~~~~~--g~iD~lVnnAg  144 (317)
T 3oec_A          114 ADVRDLASLQAVVDEALAEF--GHIDILVSNVG  144 (317)
T ss_dssp             CCTTCHHHHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred             CCCCCHHHHHHHHHHHHHHc--CCCCEEEECCC
Confidence             333322 1   22222333  26999999987

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.96  E-value=0.027  Score=47.23  Aligned_cols=71  Identities=21%  Similarity=0.340  Sum_probs=49.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCC--E-EEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--V-CINYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~--~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      +||++.+|.+++..+...|++|+++++++++.+.+.+ ++..  . ..|-.+....+.+.+.... .+|++++++|
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~~d~lv~~Ag   81 (230)
T 3guy_A            7 TGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS-IPSTVVHSAG   81 (230)
T ss_dssp             ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS-CCSEEEECCC
T ss_pred             ecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh-cCCEEEEeCC
Confidence            9999999999999999999999999999988777653 3322  1 2233333323333333322 3599999887

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.96  E-value=0.025  Score=50.40  Aligned_cols=76  Identities=20%  Similarity=0.375  Sum_probs=49.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-----hhhHHHH----HHcCCCE-EE--eCCCcc-H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-----EEKLAVC----KDLGADV-CI--NYKTED-F  206 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-----~~~~~~~----~~~g~~~-~~--~~~~~~-~  206 (335)
                      +.++||          +|+++.+|.++++.+...|++|+++.++     +++.+.+    +..+... .+  |-.+.. +
T Consensus         5 ~k~vlV----------TGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v   74 (324)
T 3u9l_A            5 KKIILI----------TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSV   74 (324)
T ss_dssp             CCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Confidence            568999          9999999999999999999999998775     3333333    2334332 22  333322 2


Q ss_pred             H---HHHHHHhCCCcccEEEeCCC
Q 019790          207 V---ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~---~~~~~~~~~~~~d~vid~~g  227 (335)
                      .   +.+.+..  .++|++++++|
T Consensus        75 ~~~~~~~~~~~--g~iD~lVnnAG   96 (324)
T 3u9l_A           75 DRAIDQIIGED--GRIDVLIHNAG   96 (324)
T ss_dssp             HHHHHHHHHHH--SCCSEEEECCC
T ss_pred             HHHHHHHHHHc--CCCCEEEECCC
Confidence            2   2222233  26999999998

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=95.95  E-value=0.027  Score=48.47  Aligned_cols=101  Identities=18%  Similarity=0.186  Sum_probs=66.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH---HHcCCC-EEE--eCCCcc----HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDLGAD-VCI--NYKTED----FVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~---~~~g~~-~~~--~~~~~~----~~~  208 (335)
                      +|..+||          +||++++|.+.++.+-..|++|+++.+++++.+.+   .+.+.. ..+  |-.+..    +.+
T Consensus         6 ~gKvalV----------TGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~   75 (258)
T 4gkb_A            6 QDKVVIV----------TGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVA   75 (258)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHH
Confidence            5788999          99999999999999989999999999877654433   333432 222  333322    223


Q ss_pred             HHHHHhCCCcccEEEeCCChh----------hH---------------HHhhcccc-CCCEEEEEeccC
Q 019790          209 RVKEETGGKGVDVILDCMGAS----------YF---------------QRNLGSLN-IDGRLFIIGTQG  251 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~----------~~---------------~~~~~~l~-~~G~~v~~g~~~  251 (335)
                      .+.+..  +++|++++++|-.          .+               +.+++.|+ .+|+++.+++..
T Consensus        76 ~~~~~~--G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  142 (258)
T 4gkb_A           76 QTIATF--GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT  142 (258)
T ss_dssp             HHHHHH--SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred             HHHHHh--CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence            333333  3699999998731          11               23344453 469999987654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=95.95  E-value=0.026  Score=48.48  Aligned_cols=77  Identities=19%  Similarity=0.280  Sum_probs=53.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----H-cCCC-E-E--EeCCCccH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----D-LGAD-V-C--INYKTEDF---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~-~g~~-~-~--~~~~~~~~---  206 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+.+.    + .+.. . .  .|-.+..-   
T Consensus         7 ~~k~~lV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   76 (265)
T 3lf2_A            7 SEAVAVV----------TGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRA   76 (265)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHH
Confidence            4678999          999999999999999999999999999987765543    2 2322 2 2  23333221   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..+  ++|++++++|
T Consensus        77 ~~~~~~~~~g--~id~lvnnAg   96 (265)
T 3lf2_A           77 FAEACERTLG--CASILVNNAG   96 (265)
T ss_dssp             HHHHHHHHHC--SCSEEEECCC
T ss_pred             HHHHHHHHcC--CCCEEEECCC
Confidence             223333333  6899999987

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.95  E-value=0.018  Score=48.92  Aligned_cols=78  Identities=21%  Similarity=0.340  Sum_probs=51.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHHH----HcCCCE-EE--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCK----DLGADV-CI--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~----~~g~~~-~~--~~~~~~-~~--  207 (335)
                      .+.++||          +|++|.+|..++..+...|++|++++++ +++.+.+.    ..+... .+  |-.+.. +.  
T Consensus         6 ~~k~vlV----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   75 (258)
T 3afn_B            6 KGKRVLI----------TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQL   75 (258)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            3578999          9999999999999999999999999988 55544332    223322 22  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCCh
Q 019790          208 -ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g~  228 (335)
                       +.+.+..  .++|++|.++|.
T Consensus        76 ~~~~~~~~--g~id~vi~~Ag~   95 (258)
T 3afn_B           76 VDEFVAKF--GGIDVLINNAGG   95 (258)
T ss_dssp             HHHHHHHH--SSCSEEEECCCC
T ss_pred             HHHHHHHc--CCCCEEEECCCC
Confidence             1222222  269999999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=95.95  E-value=0.016  Score=49.97  Aligned_cols=78  Identities=21%  Similarity=0.261  Sum_probs=52.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-H---HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-F---VARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~---~~~~~~~  213 (335)
                      .+.++||          +||++.+|.+++..+...|++|++++++.++.+.+....... ..|-.+.. +   .+.+.+.
T Consensus        15 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           15 MKKLVVI----------TGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             CCCEEEE----------ESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999          999999999999999999999999999987665442221111 12333322 1   2223333


Q ss_pred             hCCCcccEEEeCCCh
Q 019790          214 TGGKGVDVILDCMGA  228 (335)
Q Consensus       214 ~~~~~~d~vid~~g~  228 (335)
                      .+  ++|++|+++|.
T Consensus        85 ~g--~iD~lvnnAg~   97 (266)
T 3p19_A           85 YG--PADAIVNNAGM   97 (266)
T ss_dssp             HC--SEEEEEECCCC
T ss_pred             CC--CCCEEEECCCc
Confidence            32  69999999873

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.94  E-value=0.03  Score=48.32  Aligned_cols=78  Identities=22%  Similarity=0.424  Sum_probs=51.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHH----HHcCCCE-EE--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADV-CI--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~----~~~g~~~-~~--~~~~~~-~---  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|++++++ ++..+.+    ++.+... .+  |-.+.. +   
T Consensus        28 ~~k~vlI----------TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           28 TGKNVLI----------TGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             SCCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            5678999          9999999999999999999999999984 4433333    3344333 22  322222 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  .++|++|.++|.
T Consensus        98 ~~~~~~~~--g~id~li~nAg~  117 (271)
T 4iin_A           98 IQTIVQSD--GGLSYLVNNAGV  117 (271)
T ss_dssp             HHHHHHHH--SSCCEEEECCCC
T ss_pred             HHHHHHhc--CCCCEEEECCCc
Confidence            22222222  269999999873

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.94  E-value=0.024  Score=49.70  Aligned_cols=77  Identities=22%  Similarity=0.420  Sum_probs=52.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC---CE-EE--eCCCcc-H-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---DV-CI--NYKTED-F-  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~---~~-~~--~~~~~~-~-  206 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+.    +.+.   .. .+  |-.+.. + 
T Consensus        25 ~~k~vlV----------TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~   94 (297)
T 1xhl_A           25 SGKSVII----------TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQD   94 (297)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHH
Confidence            4678999          999999999999999999999999999987665442    2232   22 22  333322 1 


Q ss_pred             --HHHHHHHhCCCcccEEEeCCC
Q 019790          207 --VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+.+..  .++|++|+++|
T Consensus        95 ~~~~~~~~~~--g~iD~lvnnAG  115 (297)
T 1xhl_A           95 DIINTTLAKF--GKIDILVNNAG  115 (297)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHhc--CCCCEEEECCC
Confidence              12222223  26999999887

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.94  E-value=0.06  Score=46.90  Aligned_cols=76  Identities=13%  Similarity=0.211  Sum_probs=53.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc----CCC-EEEeCCCccHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD-VCINYKTEDFVARVK  211 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~----g~~-~~~~~~~~~~~~~~~  211 (335)
                      .++.++||          +|++|++|.+++..+...|++|+++.|+.++.+.+. ++    +.. ...|..+.   +.+.
T Consensus       117 l~gk~vlV----------tGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~---~~~~  183 (287)
T 1lu9_A          117 VKGKKAVV----------LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASRA  183 (287)
T ss_dssp             CTTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHHH
T ss_pred             CCCCEEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH---HHHH
Confidence            36789999          999999999999999999999999999987665443 22    222 22343332   2334


Q ss_pred             HHhCCCcccEEEeCCCh
Q 019790          212 EETGGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~  228 (335)
                      +...  .+|++++|+|.
T Consensus       184 ~~~~--~~DvlVn~ag~  198 (287)
T 1lu9_A          184 EAVK--GAHFVFTAGAI  198 (287)
T ss_dssp             HHTT--TCSEEEECCCT
T ss_pred             HHHH--hCCEEEECCCc
Confidence            4432  48999999974

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.94  E-value=0.024  Score=48.62  Aligned_cols=80  Identities=21%  Similarity=0.321  Sum_probs=52.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCC---CeEEEEecChhhHHHHHH---cCCCE-E--EeCCCcc-HH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG---VRVFVTAGSEEKLAVCKD---LGADV-C--INYKTED-FV  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g---~~V~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~-~~  207 (335)
                      ..+.++||          +|++|.+|.++++.+...|   ++|++++++.++.+.+.+   .+... .  .|-.+.+ +.
T Consensus        19 ~~~k~vlI----------TGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~   88 (267)
T 1sny_A           19 SHMNSILI----------TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYD   88 (267)
T ss_dssp             -CCSEEEE----------SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHH
T ss_pred             CCCCEEEE----------ECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHH
Confidence            34678999          9999999999999999999   999999998765443332   23222 2  2333322 22


Q ss_pred             ---HHHHHHhCCCcccEEEeCCC
Q 019790          208 ---ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ---~~~~~~~~~~~~d~vid~~g  227 (335)
                         +.+.+..+..++|++|.++|
T Consensus        89 ~~~~~~~~~~g~~~id~li~~Ag  111 (267)
T 1sny_A           89 KLVADIEGVTKDQGLNVLFNNAG  111 (267)
T ss_dssp             HHHHHHHHHHGGGCCSEEEECCC
T ss_pred             HHHHHHHHhcCCCCccEEEECCC
Confidence               22223332225999999987

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.93  E-value=0.019  Score=48.66  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=51.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-e--cChhhHHHHH-Hc-CCCEEEeCCC-ccHHHHHHHHh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-A--GSEEKLAVCK-DL-GADVCINYKT-EDFVARVKEET  214 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~--~~~~~~~~~~-~~-g~~~~~~~~~-~~~~~~~~~~~  214 (335)
                      .++||          +|+++.+|.++++.+...|++|+++ .  +++++.+.+. ++ +. .+.+... ..+.+.+.+..
T Consensus         2 k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~   70 (244)
T 1zmo_A            2 VIALV----------THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG   70 (244)
T ss_dssp             CEEEE----------SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS
T ss_pred             CEEEE----------ECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc
Confidence            57899          9999999999999999999999999 6  8887766554 34 32 2333222 22333333332


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                        .++|++|+++|
T Consensus        71 --g~iD~lv~~Ag   81 (244)
T 1zmo_A           71 --EAIDTIVSNDY   81 (244)
T ss_dssp             --SCEEEEEECCC
T ss_pred             --CCCCEEEECCC
Confidence              36999999887

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=95.93  E-value=0.072  Score=45.50  Aligned_cols=95  Identities=21%  Similarity=0.235  Sum_probs=62.9

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~  212 (335)
                      +.++.+||-          .| +|. |..++.+++ +|++|++++.++...+.+++    .+..  +.....++.+.   
T Consensus       118 ~~~~~~VLD----------iG-cG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~---  179 (254)
T 2nxc_A          118 LRPGDKVLD----------LG-TGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA---  179 (254)
T ss_dssp             CCTTCEEEE----------ET-CTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH---
T ss_pred             cCCCCEEEE----------ec-CCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc---
Confidence            577888888          77 444 777777766 47799999999988877764    3432  11112223222   


Q ss_pred             HhCCCcccEEEeCCChh----hHHHhhccccCCCEEEEEecc
Q 019790          213 ETGGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g~~  250 (335)
                       .....||+|+.+....    .+..+.+.|+++|+++..+..
T Consensus       180 -~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          180 -LPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             -GGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             -CcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence             2234799999766433    246678889999999987643

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=95.93  E-value=0.017  Score=49.15  Aligned_cols=99  Identities=19%  Similarity=0.231  Sum_probs=69.8

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCC--EEEeCCC
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKT  203 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~  203 (335)
                      ....++.++++||-          .| +| .|..+..+++..  +.+|++++.+++..+.+++    .+..  ..+... 
T Consensus        86 ~~~~~~~~~~~vld----------iG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-  152 (255)
T 3mb5_A           86 VAYAGISPGDFIVE----------AG-VG-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-  152 (255)
T ss_dssp             HHHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-
T ss_pred             HHhhCCCCCCEEEE----------ec-CC-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-
Confidence            35667889999998          77 44 388888888885  5799999999988877764    2432  222121 


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCChh--hHHHhhccccCCCEEEEEe
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g  248 (335)
                       ++.    +......||+|+-..+..  .+..+.+.|+++|+++...
T Consensus       153 -d~~----~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          153 -DIY----EGIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             -CGG----GCCCCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             -chh----hccCCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence             111    123344699999877653  5788899999999998764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.90  E-value=0.017  Score=50.23  Aligned_cols=91  Identities=13%  Similarity=0.107  Sum_probs=60.6

Q ss_pred             ccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCCCcccEEEeCCChh----
Q 019790          156 HGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMGAS----  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~----  229 (335)
                      +|++|.+|..+++.+... |.+|++++|++++...+...+...+ .|..+   .+.+.+...  ++|+||.+++..    
T Consensus         6 tGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d---~~~l~~~~~--~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            6 TGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFN---QESMVEAFK--GMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTC---HHHHHHHTT--TCSEEEECCCCCCSHH
T ss_pred             EcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCC---HHHHHHHHh--CCCEEEEeCCCCccch
Confidence            999999999999998887 8999999999876554433343322 23332   234555543  689999998742    


Q ss_pred             ----hHHHhhccccCC--CEEEEEeccC
Q 019790          230 ----YFQRNLGSLNID--GRLFIIGTQG  251 (335)
Q Consensus       230 ----~~~~~~~~l~~~--G~~v~~g~~~  251 (335)
                          .....++.++..  ++++.++...
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence                123444554433  5888887654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=95.89  E-value=0.026  Score=48.96  Aligned_cols=78  Identities=29%  Similarity=0.444  Sum_probs=53.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC---CE-EE--eCCCcc-H-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA---DV-CI--NYKTED-F-  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~---~~-~~--~~~~~~-~-  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++++.+.+.    +.+.   .. .+  |-.+.. + 
T Consensus        10 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~   79 (281)
T 3svt_A           10 QDRTYLV----------TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETA   79 (281)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHH
Confidence            4678999          999999999999999999999999999987765443    2332   11 12  333322 1 


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 --VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+.+..+  ++|++++++|.
T Consensus        80 ~~~~~~~~~~g--~id~lv~nAg~  101 (281)
T 3svt_A           80 RAVDAVTAWHG--RLHGVVHCAGG  101 (281)
T ss_dssp             HHHHHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHHHHcC--CCCEEEECCCc
Confidence              222333332  68999999884

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.89  E-value=0.02  Score=49.15  Aligned_cols=79  Identities=15%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCCCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEE--eCCCccH--
Q 019790          137 LSPGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDF--  206 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~--  206 (335)
                      ..++.++||          +||+  +.+|.++++.+...|++|+++.+++...+.++    +.+....+  |-.+..-  
T Consensus        11 ~~~~k~vlI----------TGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   80 (271)
T 3ek2_A           11 FLDGKRILL----------TGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQID   80 (271)
T ss_dssp             TTTTCEEEE----------CCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             ccCCCEEEE----------eCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHH
Confidence            356789999          9988  99999999999999999999998855444333    23322222  3333221  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCC
Q 019790          207 --VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+.+..  .++|++|+++|
T Consensus        81 ~~~~~~~~~~--g~id~lv~nAg  101 (271)
T 3ek2_A           81 ALFASLKTHW--DSLDGLVHSIG  101 (271)
T ss_dssp             HHHHHHHHHC--SCEEEEEECCC
T ss_pred             HHHHHHHHHc--CCCCEEEECCc
Confidence              22233332  36999999887

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.88  E-value=0.032  Score=48.49  Aligned_cols=78  Identities=17%  Similarity=0.302  Sum_probs=51.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHHH----Hc-CCCEEE---eCCCcc-H--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK----DL-GADVCI---NYKTED-F--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~----~~-g~~~~~---~~~~~~-~--  206 (335)
                      .+.++||          +||++.+|.+++..+...|++|+++++ +.+..+.+.    .. +....+   |-.+.. +  
T Consensus        24 ~~k~~lV----------TGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   93 (281)
T 3v2h_A           24 MTKTAVI----------TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIAD   93 (281)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHH
Confidence            4678999          999999999999999999999999998 544444332    22 333222   322322 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 -VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+.+..  .++|++++++|.
T Consensus        94 ~~~~~~~~~--g~iD~lv~nAg~  114 (281)
T 3v2h_A           94 MMAMVADRF--GGADILVNNAGV  114 (281)
T ss_dssp             HHHHHHHHT--SSCSEEEECCCC
T ss_pred             HHHHHHHHC--CCCCEEEECCCC
Confidence             22222332  369999999873

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.88  E-value=0.017  Score=49.98  Aligned_cols=78  Identities=19%  Similarity=0.349  Sum_probs=52.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc---C---CC-EE--EeCCCcc-H-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---G---AD-VC--INYKTED-F-  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~---g---~~-~~--~~~~~~~-~-  206 (335)
                      .+.++||          +|+++.+|.+++..+...|++|+++++++++.+.+. ++   .   .. ..  .|-.+.. + 
T Consensus         5 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   74 (278)
T 1spx_A            5 AEKVAII----------TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQD   74 (278)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHH
Confidence            4578999          999999999999999999999999999987765543 22   2   11 12  2333322 1 


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 --VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+.+..  .++|++|+++|.
T Consensus        75 ~~~~~~~~~~--g~id~lv~~Ag~   96 (278)
T 1spx_A           75 EILSTTLGKF--GKLDILVNNAGA   96 (278)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCC-
T ss_pred             HHHHHHHHHc--CCCCEEEECCCC
Confidence              12222223  269999999873

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.85  E-value=0.033  Score=48.05  Aligned_cols=78  Identities=26%  Similarity=0.296  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~~----  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++.+ +++..+.+    ++.+.... +  |-.+...    
T Consensus        27 ~~k~vlV----------TGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~   96 (269)
T 4dmm_A           27 TDRIALV----------TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEAL   96 (269)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4678999          999999999999999999999999887 55444433    23343332 2  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..+  ++|++++++|.
T Consensus        97 ~~~~~~~~g--~id~lv~nAg~  116 (269)
T 4dmm_A           97 FAAVIERWG--RLDVLVNNAGI  116 (269)
T ss_dssp             HHHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHHcC--CCCEEEECCCC
Confidence            223333332  69999998873

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.84  E-value=0.057  Score=45.13  Aligned_cols=101  Identities=8%  Similarity=0.072  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCC-EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~  205 (335)
                      ...+.+++.+||-          .|  ++.|..+..+++.+  +.+|+.++.+++..+.+++    .|.. .-+.....+
T Consensus        50 ~~~~~~~~~~vLd----------iG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd  117 (221)
T 3dr5_A           50 ATTNGNGSTGAIA----------IT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR  117 (221)
T ss_dssp             HHSCCTTCCEEEE----------ES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred             HhhCCCCCCCEEE----------Ec--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC
Confidence            3344445568887          77  56788899999986  6799999999988777753    3432 111112233


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh----hHHHhhccccCCCEEEE
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~  246 (335)
                      ..+.+.. .....||+||-.....    .+..+.+.|+++|.++.
T Consensus       118 a~~~l~~-~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~  161 (221)
T 3dr5_A          118 PLDVMSR-LANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVL  161 (221)
T ss_dssp             HHHHGGG-SCTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHH-hcCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEE
Confidence            2222222 2235799998654432    35778899999999886

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.84  E-value=0.03  Score=48.10  Aligned_cols=77  Identities=29%  Similarity=0.388  Sum_probs=51.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCcc-HHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTED-FVA-  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~-~~~-  208 (335)
                      .+.++||          +|++|.+|.+++..+...|++|+++++ ++++.+.+    ++.+.... +  |-.+.. +.+ 
T Consensus        20 ~~k~vlI----------tGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~   89 (274)
T 1ja9_A           20 AGKVALT----------TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVAL   89 (274)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence            4678999          999999999999999999999999998 66554433    23354322 2  333322 211 


Q ss_pred             --HHHHHhCCCcccEEEeCCC
Q 019790          209 --RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 --~~~~~~~~~~~d~vid~~g  227 (335)
                        .+.+..+  ++|++|.++|
T Consensus        90 ~~~~~~~~~--~~d~vi~~Ag  108 (274)
T 1ja9_A           90 FDKAVSHFG--GLDFVMSNSG  108 (274)
T ss_dssp             HHHHHHHHS--CEEEEECCCC
T ss_pred             HHHHHHHcC--CCCEEEECCC
Confidence              2222222  6999999887

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.83  E-value=0.025  Score=48.21  Aligned_cols=101  Identities=16%  Similarity=0.154  Sum_probs=69.4

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC----EEEeCCCccH
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD----VCINYKTEDF  206 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~  206 (335)
                      +.....+.++.+||-          .|  ++.|..+..+++..+++|++++.+++..+.+++....    .....+....
T Consensus        47 ~~~~~~~~~~~~vLd----------iG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~  114 (266)
T 3ujc_A           47 ILSDIELNENSKVLD----------IG--SGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK  114 (266)
T ss_dssp             HTTTCCCCTTCEEEE----------ET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC
T ss_pred             HHHhcCCCCCCEEEE----------EC--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC
Confidence            335567788999998          77  3478888888887799999999999999988875422    1222221111


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEec
Q 019790          207 VARVKEETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~  249 (335)
                            ......||+|+.+..-         ..+..+.+.|+|+|+++....
T Consensus       115 ------~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          115 ------EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             ------CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ------CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence                  1123579999975331         124677889999999987754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=95.80  E-value=0.03  Score=48.45  Aligned_cols=79  Identities=24%  Similarity=0.327  Sum_probs=51.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH---cCCCE-E--EeCCCccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGADV-C--INYKTEDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~~~~~~~~  212 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++++++...+.+++   .+... .  .|-.+....+.+.+
T Consensus        30 ~gk~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~   99 (273)
T 3uf0_A           30 AGRTAVV----------TGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAE   99 (273)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            4778999          9999999999999999999999999976544443333   33222 1  23333222222211


Q ss_pred             H-hCCCcccEEEeCCC
Q 019790          213 E-TGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~-~~~~~~d~vid~~g  227 (335)
                      . ....++|++|+++|
T Consensus       100 ~~~~~g~iD~lv~nAg  115 (273)
T 3uf0_A          100 ELAATRRVDVLVNNAG  115 (273)
T ss_dssp             HHHHHSCCCEEEECCC
T ss_pred             HHHhcCCCcEEEECCC
Confidence            1 11136999999887

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.80  E-value=0.028  Score=48.99  Aligned_cols=77  Identities=13%  Similarity=0.134  Sum_probs=51.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhHHHHH-----HcCCCE-E--EeCCC----cc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK-----DLGADV-C--INYKT----ED  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~-----~~g~~~-~--~~~~~----~~  205 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++ ++.+.+.     ..+... .  .|-.+    ..
T Consensus        22 ~~k~~lV----------TGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~   91 (288)
T 2x9g_A           22 EAPAAVV----------TGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPA   91 (288)
T ss_dssp             CCCEEEE----------TTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHH
Confidence            4678999          99999999999999988999999999987 5543332     234332 2  23333    11


Q ss_pred             -H---HHHHHHHhCCCcccEEEeCCC
Q 019790          206 -F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                       +   .+.+.+..  .++|++|+++|
T Consensus        92 ~v~~~~~~~~~~~--g~iD~lvnnAG  115 (288)
T 2x9g_A           92 SCEEIINSCFRAF--GRCDVLVNNAS  115 (288)
T ss_dssp             HHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHHHHhc--CCCCEEEECCC
Confidence             1   12222222  26999999887

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.79  E-value=0.035  Score=48.07  Aligned_cols=78  Identities=22%  Similarity=0.301  Sum_probs=52.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-------------ChhhHHHHH----HcCCCEE--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-------------SEEKLAVCK----DLGADVC--  198 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-------------~~~~~~~~~----~~g~~~~--  198 (335)
                      -.+.++||          +|+++.+|.++++.+...|++|+++++             ++++.+.+.    +.+....  
T Consensus        13 l~gk~~lV----------TGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (280)
T 3pgx_A           13 LQGRVAFI----------TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTR   82 (280)
T ss_dssp             TTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred             cCCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEE
Confidence            45788999          999999999999999999999999987             455544432    3343332  


Q ss_pred             -EeCCCccH----HHHHHHHhCCCcccEEEeCCC
Q 019790          199 -INYKTEDF----VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       199 -~~~~~~~~----~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .|-.+..-    .+.+.+..+  ++|++++++|
T Consensus        83 ~~Dv~~~~~v~~~~~~~~~~~g--~id~lvnnAg  114 (280)
T 3pgx_A           83 VLDVRDDAALRELVADGMEQFG--RLDVVVANAG  114 (280)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHC--CCCEEEECCC
T ss_pred             EcCCCCHHHHHHHHHHHHHHcC--CCCEEEECCC
Confidence             23333221    222233332  6999999987

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.79  E-value=0.0032  Score=53.86  Aligned_cols=86  Identities=16%  Similarity=0.246  Sum_probs=54.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH--HHHHHHHhCC--CcccEEEeCCChhh-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF--VARVKEETGG--KGVDVILDCMGASY-  230 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~--~~~d~vid~~g~~~-  230 (335)
                      +|+++.+|.++++.+...|++|+++++++++.+.      .     ...++  .+.+.+....  .++|++|+++|... 
T Consensus         7 TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-----~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~   75 (257)
T 1fjh_A            7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-----LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ   75 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-----TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-----cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCC
Confidence            9999999999999999999999999987654221      0     11111  1223333221  36899999987422 


Q ss_pred             ------------------HHHhhccccC--CCEEEEEeccCC
Q 019790          231 ------------------FQRNLGSLNI--DGRLFIIGTQGG  252 (335)
Q Consensus       231 ------------------~~~~~~~l~~--~G~~v~~g~~~~  252 (335)
                                        .+.+++.+..  .|+++.++....
T Consensus        76 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           76 TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence                              1233444433  389999876543

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.77  E-value=0.02  Score=48.55  Aligned_cols=76  Identities=25%  Similarity=0.239  Sum_probs=51.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc----CCCE-EE--eCCCcc-HH---
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADV-CI--NYKTED-FV---  207 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~----g~~~-~~--~~~~~~-~~---  207 (335)
                      +.++||          +|++|.+|.+++..+...|++|+++++++++.+.+. ++    +... .+  |-.+.. +.   
T Consensus         2 ~k~vlI----------tGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   71 (250)
T 2cfc_A            2 SRVAIV----------TGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAI   71 (250)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            457899          999999999999999999999999999987765543 22    2221 22  333322 11   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|.++|
T Consensus        72 ~~~~~~~--~~id~li~~Ag   89 (250)
T 2cfc_A           72 AATMEQF--GAIDVLVNNAG   89 (250)
T ss_dssp             HHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHh--CCCCEEEECCC
Confidence            2222222  26899999886

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.76  E-value=0.021  Score=49.37  Aligned_cols=77  Identities=19%  Similarity=0.210  Sum_probs=51.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE-EE--eCCCcc-HHH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVA--  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~--  208 (335)
                      .+.++||          +|++|.+|.+++..+...|++|++++++.++.+.+.    ..+... .+  |-.+.. +.+  
T Consensus        33 ~~k~vlI----------TGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~  102 (279)
T 3ctm_A           33 KGKVASV----------TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETI  102 (279)
T ss_dssp             TTCEEEE----------TTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHH
Confidence            4678999          999999999999988888999999998766544332    234332 22  333322 212  


Q ss_pred             -HHHHHhCCCcccEEEeCCC
Q 019790          209 -RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+..  .++|++|.++|
T Consensus       103 ~~~~~~~--g~id~li~~Ag  120 (279)
T 3ctm_A          103 SQQEKDF--GTIDVFVANAG  120 (279)
T ss_dssp             HHHHHHH--SCCSEEEECGG
T ss_pred             HHHHHHh--CCCCEEEECCc
Confidence             222222  25899999886

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.76  E-value=0.073  Score=49.01  Aligned_cols=90  Identities=11%  Similarity=0.183  Sum_probs=66.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH----
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF----  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~----  231 (335)
                      .| .|.+|..+++.++..|.+|++++.++++.+.+++.|...++ .+..+ . .+.+..+-..+|+++-+++....    
T Consensus        10 iG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~-GDat~-~-~~L~~agi~~A~~viv~~~~~~~n~~i   85 (413)
T 3l9w_A           10 AG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFY-GDATR-M-DLLESAGAAKAEVLINAIDDPQTNLQL   85 (413)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEE-SCTTC-H-HHHHHTTTTTCSEEEECCSSHHHHHHH
T ss_pred             EC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEE-cCCCC-H-HHHHhcCCCccCEEEECCCChHHHHHH
Confidence            77 79999999999999999999999999999999988876544 22222 1 23334445679999999997542    


Q ss_pred             HHhhccccCCCEEEEEec
Q 019790          232 QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       232 ~~~~~~l~~~G~~v~~g~  249 (335)
                      ....+.+.+.-+++....
T Consensus        86 ~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           86 TEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHhCCCCeEEEEEC
Confidence            334556667777776643

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.75  E-value=0.021  Score=49.65  Aligned_cols=75  Identities=32%  Similarity=0.423  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCE--EE--eCCCccHH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV--CI--NYKTEDFV---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~--~~--~~~~~~~~---  207 (335)
                      .+.++||          +|++|.+|.++++.+...|++|+++++++++.+.+.    +.+...  .+  |-.+....   
T Consensus        27 ~~k~vlI----------TGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~   96 (286)
T 1xu9_A           27 QGKKVIV----------TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQF   96 (286)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHH
Confidence            4678999          999999999999999999999999999988765543    234322  22  33332211   


Q ss_pred             -HHHHHHhCCCcccEEEeC
Q 019790          208 -ARVKEETGGKGVDVILDC  225 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~  225 (335)
                       +.+.+..+  ++|++|++
T Consensus        97 ~~~~~~~~g--~iD~li~n  113 (286)
T 1xu9_A           97 VAQAGKLMG--GLDMLILN  113 (286)
T ss_dssp             HHHHHHHHT--SCSEEEEC
T ss_pred             HHHHHHHcC--CCCEEEEC
Confidence             22222232  69999988

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.73  E-value=0.028  Score=47.45  Aligned_cols=78  Identities=18%  Similarity=0.312  Sum_probs=49.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH----HHcCCCEE-E--eCCCcc-HH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADVC-I--NYKTED-FV--  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~----~~~g~~~~-~--~~~~~~-~~--  207 (335)
                      .+.++||          +|++|.+|..+++.+...|++|+++ .++++..+.+    +..+.... +  |-.+.. +.  
T Consensus         4 ~~~~vlI----------tGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (247)
T 2hq1_A            4 KGKTAIV----------TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENM   73 (247)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred             CCcEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3578999          9999999999999999999999998 5555444332    23343322 2  333322 11  


Q ss_pred             -HHHHHHhCCCcccEEEeCCCh
Q 019790          208 -ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 -~~~~~~~~~~~~d~vid~~g~  228 (335)
                       +.+.+..  .++|++|.++|.
T Consensus        74 ~~~~~~~~--~~~d~vi~~Ag~   93 (247)
T 2hq1_A           74 VKTAMDAF--GRIDILVNNAGI   93 (247)
T ss_dssp             HHHHHHHH--SCCCEEEECC--
T ss_pred             HHHHHHhc--CCCCEEEECCCC
Confidence             1222222  269999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.72  E-value=0.027  Score=48.18  Aligned_cols=76  Identities=21%  Similarity=0.365  Sum_probs=50.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHH----HcCCCEE-E--eCCCcc-H---
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCK----DLGADVC-I--NYKTED-F---  206 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~----~~g~~~~-~--~~~~~~-~---  206 (335)
                      +.++||          +|+++.+|.++++.+...|++|+++++++++  .+.+.    ..+.... +  |-.+.. +   
T Consensus         2 ~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   71 (258)
T 3a28_C            2 SKVAMV----------TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSA   71 (258)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            467899          9999999999999888889999999988765  43332    2243322 2  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++|+++|
T Consensus        72 ~~~~~~~~g--~iD~lv~nAg   90 (258)
T 3a28_C           72 IDEAAEKLG--GFDVLVNNAG   90 (258)
T ss_dssp             HHHHHHHHT--CCCEEEECCC
T ss_pred             HHHHHHHhC--CCCEEEECCC
Confidence            122222332  6999999887

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.71  E-value=0.036  Score=48.12  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=32.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++
T Consensus        10 ~~k~~lV----------TGas~gIG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFV----------TGAARGQGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCEEEE----------eCCCchHHHHHHHHHHHCCCeEEEEecc
Confidence            5778999          9999999999999999999999999876

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.71  E-value=0.03  Score=48.37  Aligned_cols=77  Identities=25%  Similarity=0.414  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh-------H----HHHHHcCCCEE---EeCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-------L----AVCKDLGADVC---INYKTE  204 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~-------~----~~~~~~g~~~~---~~~~~~  204 (335)
                      .+.++||          +|+++++|.++++.+...|++|++++++.++       .    +.++..+....   .|-.+.
T Consensus         5 ~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   74 (274)
T 3e03_A            5 SGKTLFI----------TGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREE   74 (274)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCH
T ss_pred             CCcEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            4678999          9999999999999999999999999987642       2    22233343222   233332


Q ss_pred             cH----HHHHHHHhCCCcccEEEeCCC
Q 019790          205 DF----VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       205 ~~----~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .-    .+.+.+..+  ++|++++++|
T Consensus        75 ~~v~~~~~~~~~~~g--~iD~lvnnAG   99 (274)
T 3e03_A           75 DQVRAAVAATVDTFG--GIDILVNNAS   99 (274)
T ss_dssp             HHHHHHHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCC
Confidence            21    223333332  6999999987

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.70  E-value=0.031  Score=47.18  Aligned_cols=73  Identities=16%  Similarity=0.067  Sum_probs=51.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~  215 (335)
                      .+.++||          +|++|.+|..+++.+...  |++|++++|++++.+.+ ..+...+ .|..+   .+.+.+...
T Consensus         3 ~~~~ilV----------tGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d---~~~~~~~~~   68 (253)
T 1xq6_A            3 NLPTVLV----------TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITD---ADSINPAFQ   68 (253)
T ss_dssp             SCCEEEE----------ESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTS---HHHHHHHHT
T ss_pred             CCCEEEE----------EcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCC---HHHHHHHHc
Confidence            3568999          999999999999999988  89999999987765443 1122222 23222   234444443


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                        ++|++|.+++
T Consensus        69 --~~d~vi~~a~   78 (253)
T 1xq6_A           69 --GIDALVILTS   78 (253)
T ss_dssp             --TCSEEEECCC
T ss_pred             --CCCEEEEecc
Confidence              5899999887

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.70  E-value=0.067  Score=46.31  Aligned_cols=96  Identities=16%  Similarity=0.121  Sum_probs=64.8

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||....+..++.+..---.|.+++|          .|.++.+|..+++++...|++|++..+.                
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvV----------IG~s~iVG~p~A~lL~~~gAtVtv~hs~----------------  194 (285)
T 3l07_A          141 ESCTPKGIMTMLREYGIKTEGAYAVV----------VGASNVVGKPVSQLLLNAKATVTTCHRF----------------  194 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEE----------ECCCTTTHHHHHHHHHHTTCEEEEECTT----------------
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCchhHHHHHHHHHHCCCeEEEEeCC----------------
Confidence            44444445555544433357888999          8876779999999999999998877532                


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                         +.+.    .+.+  +.+|++|.++|...+ ---++++++-.++.+|...
T Consensus       195 ---t~~L----~~~~--~~ADIVI~Avg~p~~-I~~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          195 ---TTDL----KSHT--TKADILIVAVGKPNF-ITADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             ---CSSH----HHHH--TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred             ---chhH----HHhc--ccCCEEEECCCCCCC-CCHHHcCCCcEEEEecccC
Confidence               1222    2333  258999999997653 1235678888888887543

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.70  E-value=0.053  Score=46.27  Aligned_cols=42  Identities=24%  Similarity=0.215  Sum_probs=35.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhh---CCCeEEEEecChhhHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~---~g~~V~~~~~~~~~~~~~  190 (335)
                      .+.++||          +|+++.+|.+++..+..   .|++|+++++++++.+.+
T Consensus         5 ~~k~~lV----------TGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~   49 (259)
T 1oaa_A            5 GCAVCVL----------TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEE----------SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHH
T ss_pred             CCcEEEE----------eCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHH
Confidence            3567899          99999999999888877   899999999998776554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=95.70  E-value=0.019  Score=49.06  Aligned_cols=70  Identities=11%  Similarity=-0.114  Sum_probs=47.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH---HcCCCEEEeCCCccHH---HHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADVCINYKTEDFV---ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~---~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +|+++.+|.++++.+...|++|+++++++++.+.+.   ..+.....- +..++.   +.+.+..  .++|++++++|.
T Consensus         7 TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~v~~~~~~~~~~~--g~iD~lv~nAg~   82 (254)
T 1zmt_A            7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-SEQEPAELIEAVTSAY--GQVDVLVSNDIF   82 (254)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCSHHHHHHHHHHHH--SCCCEEEEECCC
T ss_pred             eCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHHHHHHHHHHHHHh--CCCCEEEECCCc
Confidence            999999999999999999999999999877655443   224332211 333332   3333333  269999998873

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=95.68  E-value=0.079  Score=44.61  Aligned_cols=74  Identities=27%  Similarity=0.382  Sum_probs=51.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccHHH---HHHHHhC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVA---RVKEETG  215 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~---~~~~~~~  215 (335)
                      +.++||          +|+++.+|.++++.+...|++|+++++++++  ..++++... ..|-.+.+..+   .+.+.. 
T Consensus         2 ~k~vlV----------TGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-   68 (239)
T 2ekp_A            2 ERKALV----------TGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQSLGAVPLPTDLEKDDPKGLVKRALEAL-   68 (239)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHHHHTCEEEECCTTTSCHHHHHHHHHHHH-
T ss_pred             CCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHHhhCcEEEecCCchHHHHHHHHHHHHHc-
Confidence            457899          9999999999999999999999999998765  233345322 12333333332   222333 


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                       .++|++++++|
T Consensus        69 -g~id~lv~~Ag   79 (239)
T 2ekp_A           69 -GGLHVLVHAAA   79 (239)
T ss_dssp             -TSCCEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             26999999887

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.68  E-value=0.027  Score=49.22  Aligned_cols=42  Identities=17%  Similarity=0.122  Sum_probs=36.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC  190 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~  190 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++ +++++.+.+
T Consensus         8 ~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALV----------TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence            4678999          99999999999999999999999999 988765544

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.67  E-value=0.037  Score=47.47  Aligned_cols=77  Identities=22%  Similarity=0.450  Sum_probs=52.1

Q ss_pred             CCCEEEEeeccccccccccccc-hHHHHHHHHHhhCCCeEEEEecChhhHHHHH-H---cC-CCE-EE--eCCCcc-H--
Q 019790          139 PGESFLVDFCSISYSDVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LG-ADV-CI--NYKTED-F--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g-~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~---~g-~~~-~~--~~~~~~-~--  206 (335)
                      .+.++||          +|++| ++|.+++..+...|++|++++++.++.+.+. +   .+ ... .+  |-.+.. +  
T Consensus        21 ~~k~vlI----------TGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   90 (266)
T 3o38_A           21 KGKVVLV----------TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDA   90 (266)
T ss_dssp             TTCEEEE----------SSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEE----------ECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHH
Confidence            5678999          99875 8999999999999999999999987765543 2   22 222 22  333322 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..  .++|++|+++|
T Consensus        91 ~~~~~~~~~--g~id~li~~Ag  110 (266)
T 3o38_A           91 LITQTVEKA--GRLDVLVNNAG  110 (266)
T ss_dssp             HHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHh--CCCcEEEECCC
Confidence             22233333  26899999987

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.60  E-value=0.032  Score=47.89  Aligned_cols=100  Identities=18%  Similarity=0.316  Sum_probs=63.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh---hHHHH----HHcCCCEE---EeCCCccH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC----KDLGADVC---INYKTEDF--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~----~~~g~~~~---~~~~~~~~--  206 (335)
                      .+.++||          +||++++|.++++.+...|++|+++.++..   +.+.+    +..+....   .|-.+..-  
T Consensus        10 ~~k~vlV----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~   79 (262)
T 3ksu_A           10 KNKVIVI----------AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVA   79 (262)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            4678999          999999999999999999999999876533   33222    22233222   23333221  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEecc
Q 019790          207 --VARVKEETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~  250 (335)
                        .+.+.+..  .++|++++++|..           .+               +.+++.++.+|+++.++..
T Consensus        80 ~~~~~~~~~~--g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           80 KLFDFAEKEF--GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             HHHHHHHHHH--CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             HHHHHHHHHc--CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence              22233333  2699999998821           01               2344556678999988654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.60  E-value=0.044  Score=46.44  Aligned_cols=77  Identities=32%  Similarity=0.390  Sum_probs=50.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCEE-E--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC-I--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~~-~--~~~~~~-~---  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++.+ +.++.+.+    +..+.... +  |-.+.. +   
T Consensus         3 ~~k~~lV----------TGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   72 (246)
T 3osu_A            3 MTKSALV----------TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAM   72 (246)
T ss_dssp             CSCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            3568999          999999999999999999999998876 44444333    33444332 2  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..+  ++|++++++|
T Consensus        73 ~~~~~~~~g--~id~lv~nAg   91 (246)
T 3osu_A           73 IKEVVSQFG--SLDVLVNNAG   91 (246)
T ss_dssp             HHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHcC--CCCEEEECCC
Confidence            222333332  6999999887

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.58  E-value=0.081  Score=45.79  Aligned_cols=96  Identities=18%  Similarity=0.094  Sum_probs=65.5

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||....+...|.+..---.|.+++|          .|.++.+|..++.++...|++|++..+.                
T Consensus       141 ~PcTp~gv~~lL~~~~i~l~Gk~vvV----------vGrs~iVG~plA~lL~~~gAtVtv~hs~----------------  194 (286)
T 4a5o_A          141 RPCTPKGIMTLLASTGADLYGMDAVV----------VGASNIVGRPMALELLLGGCTVTVTHRF----------------  194 (286)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEE----------ECTTSTTHHHHHHHHHHTTCEEEEECTT----------------
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCchhHHHHHHHHHHCCCeEEEEeCC----------------
Confidence            44444444555544333347889999          8977779999999999999999887532                


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                         +.+..+.+      +.+|++|.++|...+- --++++++..++.+|...
T Consensus       195 ---T~~L~~~~------~~ADIVI~Avg~p~~I-~~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          195 ---TRDLADHV------SRADLVVVAAGKPGLV-KGEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             ---CSCHHHHH------HTCSEEEECCCCTTCB-CGGGSCTTCEEEECCSCS
T ss_pred             ---CcCHHHHh------ccCCEEEECCCCCCCC-CHHHcCCCeEEEEecccc
Confidence               12222222      2589999999976431 235678888888888654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.58  E-value=0.048  Score=46.74  Aligned_cols=79  Identities=18%  Similarity=0.221  Sum_probs=51.0

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecCh---hhHHHHHH-cCCCEEE--eCCCcc-HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCKD-LGADVCI--NYKTED-FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~---~~~~~~~~-~g~~~~~--~~~~~~-~~~~  209 (335)
                      .+.++||          +|++  +.+|.++++.+...|++|+++++++   +..+.+.+ .+....+  |-.+.. +.+.
T Consensus         8 ~~k~vlV----------TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   77 (265)
T 1qsg_A            8 SGKRILV----------TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTM   77 (265)
T ss_dssp             TTCEEEE----------CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHH
Confidence            4678999          9998  9999999999999999999999876   33333332 2322223  333322 2222


Q ss_pred             HHHHhC-CCcccEEEeCCC
Q 019790          210 VKEETG-GKGVDVILDCMG  227 (335)
Q Consensus       210 ~~~~~~-~~~~d~vid~~g  227 (335)
                      +.+... ..++|++|+++|
T Consensus        78 ~~~~~~~~g~iD~lv~~Ag   96 (265)
T 1qsg_A           78 FAELGKVWPKFDGFVHSIG   96 (265)
T ss_dssp             HHHHHTTCSSEEEEEECCC
T ss_pred             HHHHHHHcCCCCEEEECCC
Confidence            222211 136899999887

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.56  E-value=0.046  Score=47.05  Aligned_cols=77  Identities=13%  Similarity=0.299  Sum_probs=51.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--C-EEE--eCCCcc-HH---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTED-FV---A  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~-~~---~  208 (335)
                      .+.++||          +|++|.+|.++++.+...|++|+++.++.+..+.+. +++.  . ..+  |-.+.. +.   +
T Consensus        15 ~~k~vlI----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   84 (278)
T 2bgk_A           15 QDKVAII----------TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVD   84 (278)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             cCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence            4678999          999999999999999999999999999877655443 3322  1 222  333322 11   2


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++|+++|
T Consensus        85 ~~~~~~--~~id~li~~Ag  101 (278)
T 2bgk_A           85 TTIAKH--GKLDIMFGNVG  101 (278)
T ss_dssp             HHHHHH--SCCCEEEECCC
T ss_pred             HHHHHc--CCCCEEEECCc
Confidence            222222  26999999887

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=95.55  E-value=0.039  Score=46.49  Aligned_cols=76  Identities=22%  Similarity=0.265  Sum_probs=49.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHHH----HcCCCE-E--EeCCCcc-HHH--
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADV-C--INYKTED-FVA--  208 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~----~~g~~~-~--~~~~~~~-~~~--  208 (335)
                      |.++||          +|++|.+|..+++.+...|++|+++ .+++++.+.+.    ..+... .  .|-.+.. +.+  
T Consensus         1 ~k~vlV----------TGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   70 (244)
T 1edo_A            1 SPVVVV----------TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMM   70 (244)
T ss_dssp             CCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHH
Confidence            457899          9999999999999999999999995 77776654432    234322 1  2333322 222  


Q ss_pred             -HHHHHhCCCcccEEEeCCC
Q 019790          209 -RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 -~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+..  .++|++|.++|
T Consensus        71 ~~~~~~~--g~id~li~~Ag   88 (244)
T 1edo_A           71 KTAIDAW--GTIDVVVNNAG   88 (244)
T ss_dssp             HHHHHHS--SCCSEEEECCC
T ss_pred             HHHHHHc--CCCCEEEECCC
Confidence             222222  26899999887

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.54  E-value=0.053  Score=47.76  Aligned_cols=100  Identities=17%  Similarity=0.114  Sum_probs=66.8

Q ss_pred             HhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCCc
Q 019790          133 MTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTE  204 (335)
Q Consensus       133 ~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~  204 (335)
                      .... +.++.+||-          .|  ++.|..+..+++..|++|++++.+++..+.+++    .+..   .++..+..
T Consensus       110 ~~l~~~~~~~~vLD----------iG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~  177 (312)
T 3vc1_A          110 DHLGQAGPDDTLVD----------AG--CGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML  177 (312)
T ss_dssp             TTSCCCCTTCEEEE----------ES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred             HHhccCCCCCEEEE----------ec--CCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence            3344 788999988          77  345888888888879999999999988877764    3321   22222211


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCC------hhhHHHhhccccCCCEEEEEecc
Q 019790          205 DFVARVKEETGGKGVDVILDCMG------ASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      .+.      .....||+|+..-.      ...+..+.+.|+++|+++.....
T Consensus       178 ~~~------~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~  223 (312)
T 3vc1_A          178 DTP------FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGC  223 (312)
T ss_dssp             SCC------CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             cCC------CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            110      12347999986332      23367788999999999877543

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=95.54  E-value=0.021  Score=48.57  Aligned_cols=98  Identities=16%  Similarity=0.074  Sum_probs=68.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHc-----CCCE--EEeCCC
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL-----GADV--CINYKT  203 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~-----g~~~--~~~~~~  203 (335)
                      ....+.++++||.          .| +| .|..+..+++..  +.+|++++.+++..+.+++.     |.+.  +...+.
T Consensus        90 ~~~~~~~~~~vLd----------iG-~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~  157 (258)
T 2pwy_A           90 TLLDLAPGMRVLE----------AG-TG-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKL  157 (258)
T ss_dssp             HHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCG
T ss_pred             HHcCCCCCCEEEE----------EC-CC-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECch
Confidence            5567889999999          77 45 488888999885  57999999999988877643     5322  222111


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          204 EDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ...      ......||+|+...+.  ..+..+.+.|+++|+++...
T Consensus       158 ~~~------~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          158 EEA------ELEEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             GGC------CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             hhc------CCCCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            110      0223469999986664  34688899999999998775

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=95.53  E-value=0.057  Score=46.78  Aligned_cols=98  Identities=20%  Similarity=0.226  Sum_probs=66.6

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CC--CE-EEeCCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--DV-CINYKT  203 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~--~~-~~~~~~  203 (335)
                      +....++.++.+||-          .|  ++.|..+..+++..|++|++++.+++..+.+++.    +.  .. +...+-
T Consensus        56 ~~~~~~~~~~~~vLD----------iG--cG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~  123 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLD----------VG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW  123 (287)
T ss_dssp             HHTTTTCCTTCEEEE----------ET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG
T ss_pred             HHHHcCCCCcCEEEE----------EC--CcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECCh
Confidence            335567788999998          77  3448888889977899999999999988877642    21  11 222111


Q ss_pred             ccHHHHHHHHhCCCcccEEEeC-----CCh----hhHHHhhccccCCCEEEEEec
Q 019790          204 EDFVARVKEETGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .       +. . ..||+|+..     .+.    ..+..+.+.|+|+|+++....
T Consensus       124 ~-------~~-~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          124 E-------QF-D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             G-------GC-C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             h-------hC-C-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            1       11 1 479999864     321    235778899999999987643

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.52  E-value=0.041  Score=45.72  Aligned_cols=97  Identities=14%  Similarity=0.104  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCC---EEEeCCCccH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDF  206 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~  206 (335)
                      ...++.+||-          .|  ++.|..+..+++..  +.+|+.++.+++..+.+++    .+..   .++.   .+.
T Consensus        55 ~~~~~~~vLd----------iG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~  119 (223)
T 3duw_A           55 QIQGARNILE----------IG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT---GLA  119 (223)
T ss_dssp             HHHTCSEEEE----------EC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCH
T ss_pred             HhhCCCEEEE----------ec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCH
Confidence            3456788888          77  44688888899887  6799999999988777653    3432   2222   222


Q ss_pred             HHHHHHHhC--CCcccEEEeCCChh----hHHHhhccccCCCEEEEE
Q 019790          207 VARVKEETG--GKGVDVILDCMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       207 ~~~~~~~~~--~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      .+.+.....  ...||+||-.....    .+..+.+.|+++|.++.-
T Consensus       120 ~~~~~~~~~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~  166 (223)
T 3duw_A          120 LDSLQQIENEKYEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD  166 (223)
T ss_dssp             HHHHHHHHHTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred             HHHHHHHHhcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence            222222211  14699998544332    357778999999977764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.51  E-value=0.075  Score=46.04  Aligned_cols=79  Identities=25%  Similarity=0.327  Sum_probs=52.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHH----HHcCCCEE---EeCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADVC---INYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~----~~~g~~~~---~~~~~~~-~--  206 (335)
                      ..+.++||          +||++.+|.++++.+...|++|+++++ ++++.+.+    +..+....   .|-.+.. +  
T Consensus        27 ~~~k~~lV----------TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~   96 (280)
T 4da9_A           27 KARPVAIV----------TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQA   96 (280)
T ss_dssp             CCCCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHH
T ss_pred             cCCCEEEE----------ecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence            35678999          999999999999999999999999985 55544433    23343332   2333322 2  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 -VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+.+..+  ++|++|+++|.
T Consensus        97 ~~~~~~~~~g--~iD~lvnnAg~  117 (280)
T 4da9_A           97 TVDAVVAEFG--RIDCLVNNAGI  117 (280)
T ss_dssp             HHHHHHHHHS--CCCEEEEECC-
T ss_pred             HHHHHHHHcC--CCCEEEECCCc
Confidence             233333333  69999999875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.51  E-value=0.013  Score=50.61  Aligned_cols=74  Identities=22%  Similarity=0.292  Sum_probs=50.2

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE--EeCCCccH----HHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC--INYKTEDF----VARV  210 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~----~~~~  210 (335)
                      -..+.++||          +||++.+|.++++.+...|++|++++++++...     +....  .|-.+..-    .+.+
T Consensus        11 ~~~~k~vlV----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A           11 EFTDKVAIV----------TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             TTTTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHH
Confidence            356789999          999999999999999999999999998765431     11122  23333221    2223


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++|+++|
T Consensus        76 ~~~~--g~iD~lv~nAg   90 (269)
T 3vtz_A           76 TKKY--GRIDILVNNAG   90 (269)
T ss_dssp             HHHH--SCCCEEEECCC
T ss_pred             HHHc--CCCCEEEECCC
Confidence            3333  26999999987

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=95.50  E-value=0.0022  Score=53.12  Aligned_cols=97  Identities=12%  Similarity=0.001  Sum_probs=66.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~  206 (335)
                      ....+.++++||-          .| +| .|..+..+++. +.+|++++.+++..+.+++    .+..  .+...+... 
T Consensus        71 ~~l~~~~~~~vLd----------iG-~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-  136 (210)
T 3lbf_A           71 ELLELTPQSRVLE----------IG-TG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQ-  136 (210)
T ss_dssp             HHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-
T ss_pred             HhcCCCCCCEEEE----------Ec-CC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCccc-
Confidence            5567789999998          77 44 58888888888 8899999999988877764    3432  122221111 


Q ss_pred             HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          207 VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                        .   ......||+|+.+..... ...+.+.|+++|+++..-
T Consensus       137 --~---~~~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          137 --G---WQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             --C---CGGGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             --C---CccCCCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence              0   111247999998765543 346788999999997653

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=95.48  E-value=0.062  Score=44.74  Aligned_cols=99  Identities=19%  Similarity=0.084  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC------CeEEEEecChhhHHHHHH----cC------CC-EE
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKD----LG------AD-VC  198 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g------~~V~~~~~~~~~~~~~~~----~g------~~-~~  198 (335)
                      .+.++++||.          .| +|. |..+..+++..+      .+|++++.+++..+.+++    .+      .. .+
T Consensus        77 ~~~~~~~VLd----------iG-~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~  144 (227)
T 2pbf_A           77 VLKPGSRAID----------VG-SGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKI  144 (227)
T ss_dssp             TSCTTCEEEE----------ES-CTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEE
T ss_pred             hCCCCCEEEE----------EC-CCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEE
Confidence            5788999998          87 444 888888888876      599999999988777754    23      12 22


Q ss_pred             EeCCCcc-HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEec
Q 019790          199 INYKTED-FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       199 ~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~  249 (335)
                      ...+... +......   ..+||+|+....... ...+.+.|+++|+++..-.
T Consensus       145 ~~~d~~~~~~~~~~~---~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          145 IHKNIYQVNEEEKKE---LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             EECCGGGCCHHHHHH---HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             EECChHhcccccCcc---CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            2222111 1100011   247999998766543 5778899999999976643

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.47  E-value=0.14  Score=43.50  Aligned_cols=43  Identities=21%  Similarity=0.112  Sum_probs=37.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      .+.++||          +|++|.+|..++..+...|++|+++++++++.+.+.
T Consensus         6 ~~k~vlI----------TGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~   48 (264)
T 2pd6_A            6 RSALALV----------TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETV   48 (264)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence            4678999          999999999999999999999999999987766543

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.47  E-value=0.029  Score=49.01  Aligned_cols=79  Identities=22%  Similarity=0.320  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC---eEEEEecChhhHHHHHH-c-----CCCE-E--EeCCCccH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKD-L-----GADV-C--INYKTEDF  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~---~V~~~~~~~~~~~~~~~-~-----g~~~-~--~~~~~~~~  206 (335)
                      .+.++||          +||++++|.+++..+...|+   +|+++.++.++.+.+.+ +     +... .  .|-.+...
T Consensus        32 ~~k~~lV----------TGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~  101 (287)
T 3rku_A           32 AKKTVLI----------TGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEK  101 (287)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGG
T ss_pred             CCCEEEE----------ecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHH
Confidence            3678999          99999999999887777776   99999999887766542 1     3222 1  24444333


Q ss_pred             HHHHHHHhCC--CcccEEEeCCC
Q 019790          207 VARVKEETGG--KGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~--~~~d~vid~~g  227 (335)
                      .+.+.+....  .++|++|+++|
T Consensus       102 v~~~~~~~~~~~g~iD~lVnnAG  124 (287)
T 3rku_A          102 IKPFIENLPQEFKDIDILVNNAG  124 (287)
T ss_dssp             HHHHHHTSCGGGCSCCEEEECCC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCC
Confidence            3333332211  26999999887

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.47  E-value=0.055  Score=46.73  Aligned_cols=77  Identities=16%  Similarity=0.261  Sum_probs=51.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--C-EEE--eCCCccHHHHHHHHh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VCI--NYKTEDFVARVKEET  214 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~-~~~--~~~~~~~~~~~~~~~  214 (335)
                      .++||          +|+++.+|.++++.+...|++|+++++++++.+.+. ++..  . ..+  |-.+....+.+.+..
T Consensus        22 k~vlV----------TGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   91 (272)
T 2nwq_A           22 STLFI----------TGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNL   91 (272)
T ss_dssp             CEEEE----------SSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTC
T ss_pred             cEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            67999          999999999999999999999999999988766553 2321  1 222  333322222222211


Q ss_pred             C--CCcccEEEeCCC
Q 019790          215 G--GKGVDVILDCMG  227 (335)
Q Consensus       215 ~--~~~~d~vid~~g  227 (335)
                      .  ..++|++|+++|
T Consensus        92 ~~~~g~iD~lvnnAG  106 (272)
T 2nwq_A           92 PEEFATLRGLINNAG  106 (272)
T ss_dssp             CGGGSSCCEEEECCC
T ss_pred             HHHhCCCCEEEECCC
Confidence            1  136899999887

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.46  E-value=0.089  Score=45.31  Aligned_cols=94  Identities=14%  Similarity=0.100  Sum_probs=65.4

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||.......++.+..  -.|.+++|          .|.++.+|..++.++...|++|++..+.                
T Consensus       132 ~PcTp~gv~~lL~~~~--l~Gk~vvV----------vG~s~iVG~plA~lL~~~gAtVtv~~~~----------------  183 (276)
T 3ngx_A          132 VPATPRAVIDIMDYYG--YHENTVTI----------VNRSPVVGRPLSMMLLNRNYTVSVCHSK----------------  183 (276)
T ss_dssp             CCHHHHHHHHHHHHHT--CCSCEEEE----------ECCCTTTHHHHHHHHHHTTCEEEEECTT----------------
T ss_pred             CCCcHHHHHHHHHHhC--cCCCEEEE----------EcCChHHHHHHHHHHHHCCCeEEEEeCC----------------
Confidence            4444555555564544  67889999          8976789999999999999999888642                


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                         +.+..+.++      .+|++|.++|...+- --++++++..++.+|...
T Consensus       184 ---t~~L~~~~~------~ADIVI~Avg~p~~I-~~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          184 ---TKDIGSMTR------SSKIVVVAVGRPGFL-NREMVTPGSVVIDVGINY  225 (276)
T ss_dssp             ---CSCHHHHHH------HSSEEEECSSCTTCB-CGGGCCTTCEEEECCCEE
T ss_pred             ---cccHHHhhc------cCCEEEECCCCCccc-cHhhccCCcEEEEeccCc
Confidence               122333332      479999999986431 135578888888887543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.45  E-value=0.041  Score=46.36  Aligned_cols=76  Identities=16%  Similarity=0.180  Sum_probs=50.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCC-------eEEEEecChhhHHHHHH----cCCCE-EE--eCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-------RVFVTAGSEEKLAVCKD----LGADV-CI--NYKTED  205 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-------~V~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~  205 (335)
                      +.++||          +||+|.+|.+++..+...|+       +|+++.+++++.+.+.+    .+... .+  |-.+..
T Consensus         2 ~k~vlI----------TGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   71 (244)
T 2bd0_A            2 KHILLI----------TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMA   71 (244)
T ss_dssp             CEEEEE----------ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHH
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHH
Confidence            457899          99999999999998888899       99999998877655432    23222 22  333322


Q ss_pred             -HH---HHHHHHhCCCcccEEEeCCC
Q 019790          206 -FV---ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~~---~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.   +.+.+..  .++|++|.++|
T Consensus        72 ~v~~~~~~~~~~~--g~id~li~~Ag   95 (244)
T 2bd0_A           72 DVRRLTTHIVERY--GHIDCLVNNAG   95 (244)
T ss_dssp             HHHHHHHHHHHHT--SCCSEEEECCC
T ss_pred             HHHHHHHHHHHhC--CCCCEEEEcCC
Confidence             21   2222222  36999999887

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=95.45  E-value=0.017  Score=47.83  Aligned_cols=99  Identities=19%  Similarity=0.102  Sum_probs=67.3

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC-EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD-VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~  205 (335)
                      ....+.++.+||.          .| +| .|..+..+++..|  .+|++++.+++..+.+++    .+.. ..+...+  
T Consensus        71 ~~~~~~~~~~vLd----------iG-~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d--  136 (215)
T 2yxe_A           71 ELLDLKPGMKVLE----------IG-TG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD--  136 (215)
T ss_dssp             HHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC--
T ss_pred             HhhCCCCCCEEEE----------EC-CC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC--
Confidence            4557788999999          87 45 5888889998876  799999999988777764    2322 1111111  


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                      ....   ......||+|+.+..... ...+.+.|+++|+++..-
T Consensus       137 ~~~~---~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          137 GTLG---YEPLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             GGGC---CGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccC---CCCCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            1110   111247999998766544 367789999999998764

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.44  E-value=0.022  Score=48.00  Aligned_cols=99  Identities=19%  Similarity=0.189  Sum_probs=64.1

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~  210 (335)
                      ..++.+||-          .|  ++.|..+..+++.+  +.+|+.++.+++..+.+++    .+....+.....+..+.+
T Consensus        70 ~~~~~~vLd----------iG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l  137 (232)
T 3cbg_A           70 LTGAKQVLE----------IG--VFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATL  137 (232)
T ss_dssp             HHTCCEEEE----------EC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHH
T ss_pred             hcCCCEEEE----------ec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence            345678888          77  34888999999987  5699999999988777754    243210111123333333


Q ss_pred             HHHhC-C--CcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790          211 KEETG-G--KGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~~-~--~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (335)
                      .+... +  ..||+||-....    ..+..+.+.|+++|.++.-
T Consensus       138 ~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~  181 (232)
T 3cbg_A          138 EQLTQGKPLPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVID  181 (232)
T ss_dssp             HHHHTSSSCCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             HHHHhcCCCCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence            33322 1  479999844332    2357788999999999864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=95.42  E-value=0.25  Score=37.19  Aligned_cols=93  Identities=14%  Similarity=0.154  Sum_probs=59.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      +.+++|          .| .|.+|..+++.+...|.+|+++++++++.+.+++ .+... +..+..+. +.+.+. .-..
T Consensus         4 ~m~i~I----------iG-~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~~~-~~l~~~-~~~~   69 (140)
T 1lss_A            4 GMYIII----------AG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALV-INGDCTKI-KTLEDA-GIED   69 (140)
T ss_dssp             -CEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEE-EESCTTSH-HHHHHT-TTTT
T ss_pred             CCEEEE----------EC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEE-EEcCCCCH-HHHHHc-Cccc
Confidence            357888          87 6999999999999999999999999888777764 45533 32222221 222222 2246


Q ss_pred             ccEEEeCCChhhH----HHhhccccCCCEEEEE
Q 019790          219 VDVILDCMGASYF----QRNLGSLNIDGRLFII  247 (335)
Q Consensus       219 ~d~vid~~g~~~~----~~~~~~l~~~G~~v~~  247 (335)
                      +|+++.|++....    ....+.+.+ ++++..
T Consensus        70 ~d~vi~~~~~~~~~~~~~~~~~~~~~-~~ii~~  101 (140)
T 1lss_A           70 ADMYIAVTGKEEVNLMSSLLAKSYGI-NKTIAR  101 (140)
T ss_dssp             CSEEEECCSCHHHHHHHHHHHHHTTC-CCEEEE
T ss_pred             CCEEEEeeCCchHHHHHHHHHHHcCC-CEEEEE
Confidence            9999999987542    223334444 466543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.41  E-value=0.086  Score=45.66  Aligned_cols=96  Identities=17%  Similarity=0.112  Sum_probs=64.5

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||....+...|.+...--.|.+++|          .|.++.+|..++.++...|++|++..+..               
T Consensus       140 ~PcTp~gv~~lL~~~~i~l~Gk~vvV----------vGrs~iVG~p~A~lL~~~gAtVtv~h~~t---------------  194 (285)
T 3p2o_A          140 LPCTPLGVMKLLKAYEIDLEGKDAVI----------IGASNIVGRPMATMLLNAGATVSVCHIKT---------------  194 (285)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEE----------ECCCTTTHHHHHHHHHHTTCEEEEECTTC---------------
T ss_pred             CCCCHHHHHHHHHHhCCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCc---------------
Confidence            34444444444533333357889999          89777799999999999999988876421               


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                          .+.    .+.+  +.+|++|.++|...+ ---++++++..++.+|...
T Consensus       195 ----~~L----~~~~--~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          195 ----KDL----SLYT--RQADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             ----SCH----HHHH--TTCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred             ----hhH----HHHh--hcCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence                222    2333  258999999997643 1235678887788887654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.40  E-value=0.037  Score=49.30  Aligned_cols=42  Identities=17%  Similarity=0.122  Sum_probs=36.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC  190 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~  190 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++ +++++.+.+
T Consensus        45 ~~k~~lV----------TGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALV----------TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            4678999          99999999999999999999999999 888766554

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.40  E-value=0.035  Score=48.11  Aligned_cols=78  Identities=12%  Similarity=0.194  Sum_probs=52.1

Q ss_pred             CCCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecCh--hhHHHHHH-cCCCEEE--eCCCcc-H---
Q 019790          138 SPGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCKD-LGADVCI--NYKTED-F---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~-~g~~~~~--~~~~~~-~---  206 (335)
                      -.+.++||          +||+  +++|.++++.+...|++|++++++.  +..+.+.+ .+....+  |-.+.. +   
T Consensus        24 l~~k~vlV----------TGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~   93 (280)
T 3nrc_A           24 LAGKKILI----------TGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDL   93 (280)
T ss_dssp             TTTCEEEE----------CCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEE----------ECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHH
Confidence            35678999          9988  5599999999999999999999887  55555543 3333333  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  .++|++|+++|
T Consensus        94 ~~~~~~~~--g~id~li~nAg  112 (280)
T 3nrc_A           94 FVELGKVW--DGLDAIVHSIA  112 (280)
T ss_dssp             HHHHHHHC--SSCCEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCc
Confidence            22222332  36999999887

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.40  E-value=0.052  Score=45.67  Aligned_cols=75  Identities=21%  Similarity=0.297  Sum_probs=49.8

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHHH----HcCCC-EE-E--eCCCccHH----
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGAD-VC-I--NYKTEDFV----  207 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~----~~g~~-~~-~--~~~~~~~~----  207 (335)
                      .++||          +|++|.+|..+++.+...|++|+++ .+++++.+.+.    ..+.. .. +  |-.+....    
T Consensus         2 k~vlI----------TGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   71 (245)
T 2ph3_A            2 RKALI----------TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALV   71 (245)
T ss_dssp             CEEEE----------TTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHH
T ss_pred             CEEEE----------eCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHH
Confidence            47899          9999999999999999999999998 78877655432    23332 22 2  33332211    


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  .++|++|.++|
T Consensus        72 ~~~~~~~--~~~d~li~~Ag   89 (245)
T 2ph3_A           72 HQAAEVL--GGLDTLVNNAG   89 (245)
T ss_dssp             HHHHHHH--TCCCEEEECCC
T ss_pred             HHHHHhc--CCCCEEEECCC
Confidence            2222223  26999999887

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.40  E-value=0.0052  Score=52.13  Aligned_cols=95  Identities=16%  Similarity=0.075  Sum_probs=63.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC----CCEEEeCCCccHHHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----ADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~  213 (335)
                      .+|.+||-          +|  .+.|..+..+++..+.++++++.+++..+.+++..    ....+.  ..++. .+...
T Consensus        59 ~~G~rVLd----------iG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~--~~~a~-~~~~~  123 (236)
T 3orh_A           59 SKGGRVLE----------VG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPL--KGLWE-DVAPT  123 (236)
T ss_dssp             TTCEEEEE----------EC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEE--ESCHH-HHGGG
T ss_pred             cCCCeEEE----------EC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEE--eehHH-hhccc
Confidence            67889999          87  45788899999887889999999999888887532    211111  12222 22223


Q ss_pred             hCCCcccEE-EeCCCh-----------hhHHHhhccccCCCEEEEE
Q 019790          214 TGGKGVDVI-LDCMGA-----------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       214 ~~~~~~d~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~  247 (335)
                      .....||.| +|+...           ..+.++.+.|+|||+++.+
T Consensus       124 ~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~  169 (236)
T 3orh_A          124 LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  169 (236)
T ss_dssp             SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence            344579888 565432           1235678899999999865

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.40  E-value=0.08  Score=47.35  Aligned_cols=78  Identities=15%  Similarity=0.227  Sum_probs=54.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CC-eEEEEecChhhHHHHHH-cC-CC-EEEeCCCccHHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKD-LG-AD-VCINYKTEDFVARVKE  212 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~-~V~~~~~~~~~~~~~~~-~g-~~-~~~~~~~~~~~~~~~~  212 (335)
                      -.+.+|||          +||+|.+|..+++.+... |. +|+++++++.+...+.. +. .. ..+..+-.+ .+.+.+
T Consensus        19 ~~~k~vlV----------TGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~   87 (344)
T 2gn4_A           19 LDNQTILI----------TGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD-LERLNY   87 (344)
T ss_dssp             TTTCEEEE----------ETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC-HHHHHH
T ss_pred             hCCCEEEE----------ECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC-HHHHHH
Confidence            45678999          999999999999988888 98 99999999877665542 22 11 122222222 234455


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ...  ++|+||.+++.
T Consensus        88 ~~~--~~D~Vih~Aa~  101 (344)
T 2gn4_A           88 ALE--GVDICIHAAAL  101 (344)
T ss_dssp             HTT--TCSEEEECCCC
T ss_pred             HHh--cCCEEEECCCC
Confidence            543  68999999873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.39  E-value=0.031  Score=44.94  Aligned_cols=97  Identities=18%  Similarity=0.190  Sum_probs=64.0

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCccHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFV  207 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~  207 (335)
                      ...+.++++||-          .|  .+.|..+..+++. +.+|++++.+++..+.+++    .+.+  .++.....   
T Consensus        17 ~~~~~~~~~vLD----------iG--cG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~---   80 (185)
T 3mti_A           17 AEVLDDESIVVD----------AT--MGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHE---   80 (185)
T ss_dssp             HTTCCTTCEEEE----------SC--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGG---
T ss_pred             HHhCCCCCEEEE----------Ec--CCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHH---
Confidence            346788999988          77  3458888888888 8899999999988877753    3322  22221111   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh----------------hhHHHhhccccCCCEEEEEe
Q 019790          208 ARVKEETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g  248 (335)
                       .+.... ...||+|+-+.+.                ..+..+.+.|+++|+++.+.
T Consensus        81 -~l~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  135 (185)
T 3mti_A           81 -NLDHYV-REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI  135 (185)
T ss_dssp             -GGGGTC-CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -HHHhhc-cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence             111122 3479999865321                12366778999999998764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.38  E-value=0.029  Score=49.88  Aligned_cols=79  Identities=13%  Similarity=0.131  Sum_probs=50.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH----HHHH-cCCC-EEEeCCCccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA----VCKD-LGAD-VCINYKTEDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~----~~~~-~g~~-~~~~~~~~~~~~~~~~  212 (335)
                      .+.++||          +||+|.+|..+++.+...|++|++++++.+...    .+.. .+.. ..+..+-.+ .+.+.+
T Consensus         4 ~~~~vlV----------TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~   72 (341)
T 3enk_A            4 TKGTILV----------TGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD-ERALAR   72 (341)
T ss_dssp             SSCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC-HHHHHH
T ss_pred             CCcEEEE----------ecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC-HHHHHH
Confidence            3568999          999999999999999999999999988654322    2221 1222 222221111 223333


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      .....++|+||.+++.
T Consensus        73 ~~~~~~~d~vih~A~~   88 (341)
T 3enk_A           73 IFDAHPITAAIHFAAL   88 (341)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhccCCcEEEECccc
Confidence            3322369999999873

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.37  E-value=0.058  Score=51.21  Aligned_cols=78  Identities=17%  Similarity=0.282  Sum_probs=51.9

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhh-------HHHHHHcCCCEEE---eCCCcc
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-------LAVCKDLGADVCI---NYKTED  205 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~-------~~~~~~~g~~~~~---~~~~~~  205 (335)
                      +.++.++||          +||+|.+|..++..+...|+ +|+++.++...       .+.++..|....+   |-.+..
T Consensus       256 ~~~~~~vLI----------TGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~  325 (511)
T 2z5l_A          256 WQPSGTVLI----------TGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERD  325 (511)
T ss_dssp             CCCCSEEEE----------ETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHH
T ss_pred             cCCCCEEEE----------ECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHH
Confidence            467789999          99999999999998888899 68888887531       2333444543322   222322


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g  227 (335)
                         .+.+.....++|.||.+.|
T Consensus       326 ---~v~~~~~~~~ld~VVh~AG  344 (511)
T 2z5l_A          326 ---ALAALVTAYPPNAVFHTAG  344 (511)
T ss_dssp             ---HHHHHHHHSCCSEEEECCC
T ss_pred             ---HHHHHHhcCCCcEEEECCc
Confidence               2222222147999999987

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.35  E-value=0.019  Score=48.72  Aligned_cols=100  Identities=15%  Similarity=0.155  Sum_probs=61.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhh-CCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      .+.++||          +|+++.+|.++++.+.. .|++|++..++++ ..+.+    .....|-.+..-.+.+.+....
T Consensus         3 ~~k~vlI----------TGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~----~~~~~Dv~~~~~v~~~~~~~~~   68 (244)
T 4e4y_A            3 AMANYLV----------TGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL----KFIKADLTKQQDITNVLDIIKN   68 (244)
T ss_dssp             CCEEEEE----------ETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE----EEEECCTTCHHHHHHHHHHTTT
T ss_pred             CCCeEEE----------eCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc----eEEecCcCCHHHHHHHHHHHHh
Confidence            4567999          99999999999877766 6889999887654 21111    0011233333322333344334


Q ss_pred             CcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          217 KGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       217 ~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      .++|++++++|..           .+               +.+.+.+.++|+++.++....
T Consensus        69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~  130 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC  130 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH
Confidence            5799999998741           01               233455666789998876543

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.35  E-value=0.068  Score=47.39  Aligned_cols=77  Identities=21%  Similarity=0.287  Sum_probs=52.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe---------cChhhHHH----HHHcCCCEEEeCCCcc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA---------GSEEKLAV----CKDLGADVCINYKTED  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~---------~~~~~~~~----~~~~g~~~~~~~~~~~  205 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++         |+.++.+.    ++..+.....|..+..
T Consensus         8 ~gk~~lV----------TGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~   77 (319)
T 1gz6_A            8 DGRVVLV----------TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVE   77 (319)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGG
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHH
Confidence            4678999          99999999999999999999999964         34444332    3334444455655533


Q ss_pred             -H---HHHHHHHhCCCcccEEEeCCC
Q 019790          206 -F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .   .+.+.+..  .++|++|+++|
T Consensus        78 ~~~~~~~~~~~~~--g~iD~lVnnAG  101 (319)
T 1gz6_A           78 AGEKLVKTALDTF--GRIDVVVNNAG  101 (319)
T ss_dssp             GHHHHHHHHHHHT--SCCCEEEECCC
T ss_pred             HHHHHHHHHHHHc--CCCCEEEECCC
Confidence             2   22233333  36999999987

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.34  E-value=0.02  Score=48.59  Aligned_cols=75  Identities=19%  Similarity=0.226  Sum_probs=49.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHH-----HH-
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK-----EE-  213 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~-  213 (335)
                      +.++||          +||++.+|.++++.+.. |++|+++.+++++.+.+.+......+..   ++.+...     +. 
T Consensus         5 ~k~vlI----------TGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~~~~~~   70 (245)
T 3e9n_A            5 KKIAVV----------TGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIES---DIVKEVLEEGGVDKL   70 (245)
T ss_dssp             -CEEEE----------ESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEEC---CHHHHHHTSSSCGGG
T ss_pred             CCEEEE----------EcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceec---ccchHHHHHHHHHHH
Confidence            578999          99999999999888766 9999999999988877766432222221   1211110     01 


Q ss_pred             hCCCcccEEEeCCCh
Q 019790          214 TGGKGVDVILDCMGA  228 (335)
Q Consensus       214 ~~~~~~d~vid~~g~  228 (335)
                      ..-.++|++++++|.
T Consensus        71 ~~~~~id~lv~~Ag~   85 (245)
T 3e9n_A           71 KNLDHVDTLVHAAAV   85 (245)
T ss_dssp             TTCSCCSEEEECC--
T ss_pred             HhcCCCCEEEECCCc
Confidence            111368999999874

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.34  E-value=0.048  Score=51.05  Aligned_cols=92  Identities=18%  Similarity=0.203  Sum_probs=68.7

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      --.|.++.|          .| .|.+|..+++.++.+|++|++.+++..+...+...|.. +.     .    +.+..  
T Consensus       254 ~l~GktVgI----------IG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~~-----~----l~ell--  310 (479)
T 1v8b_A          254 LISGKIVVI----------CG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV-----T----LDEIV--  310 (479)
T ss_dssp             CCTTSEEEE----------EC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC-----C----HHHHT--
T ss_pred             ccCCCEEEE----------Ee-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-ec-----C----HHHHH--
Confidence            356888988          87 89999999999999999999999998775445555652 21     1    23333  


Q ss_pred             CcccEEEeCCChhhH--HHhhccccCCCEEEEEeccC
Q 019790          217 KGVDVILDCMGASYF--QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       217 ~~~d~vid~~g~~~~--~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +..|+|+-+.+...+  ...+..|+++..++.+|...
T Consensus       311 ~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          311 DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             hcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            258999999866542  46778899999999887543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.33  E-value=0.087  Score=45.96  Aligned_cols=97  Identities=14%  Similarity=0.109  Sum_probs=64.8

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||....+...|.+..---.|.+++|          .|.++.+|..++.++...|++|++..+....             
T Consensus       145 ~PcTp~gv~~lL~~~~i~l~Gk~vvV----------IG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~-------------  201 (300)
T 4a26_A          145 TPCTAKGVIVLLKRCGIEMAGKRAVV----------LGRSNIVGAPVAALLMKENATVTIVHSGTST-------------  201 (300)
T ss_dssp             CCHHHHHHHHHHHHHTCCCTTCEEEE----------ECCCTTTHHHHHHHHHHTTCEEEEECTTSCH-------------
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCCCCC-------------
Confidence            44444444555544443457889999          8876779999999999999999988752211             


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                            ..  +.+.+  +.+|++|.++|...+- --++++++..++.+|..
T Consensus       202 ------l~--l~~~~--~~ADIVI~Avg~p~~I-~~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          202 ------ED--MIDYL--RTADIVIAAMGQPGYV-KGEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             ------HH--HHHHH--HTCSEEEECSCCTTCB-CGGGSCTTCEEEECCCE
T ss_pred             ------ch--hhhhh--ccCCEEEECCCCCCCC-cHHhcCCCcEEEEEecc
Confidence                  11  01222  2589999999976431 13557888888888764

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.32  E-value=0.14  Score=42.02  Aligned_cols=95  Identities=17%  Similarity=0.061  Sum_probs=60.7

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-CC----------------C-
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GA----------------D-  196 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-g~----------------~-  196 (335)
                      ..+.++.+||.          .|  .+.|..+..+++. |++|++++.+++..+.+++. +.                . 
T Consensus        18 l~~~~~~~vLD----------~G--CG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v   84 (203)
T 1pjz_A           18 LNVVPGARVLV----------PL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGI   84 (203)
T ss_dssp             HCCCTTCEEEE----------TT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSS
T ss_pred             cccCCCCEEEE----------eC--CCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCcc
Confidence            45678889999          76  4567777788876 99999999999998888653 11                1 


Q ss_pred             EEEeCCCccHHHHHHHHhCCCcccEEEeCCC-----hh----hHHHhhccccCCCEEEEE
Q 019790          197 VCINYKTEDFVARVKEETGGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      ..+..+...+..  ..   ...||+|++...     ..    .+..+.+.|+|+|+++++
T Consensus        85 ~~~~~d~~~l~~--~~---~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           85 EIWCGDFFALTA--RD---IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             EEEEECCSSSTH--HH---HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             EEEECccccCCc--cc---CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            122111111110  00   026999997332     11    246678899999995444

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.32  E-value=0.033  Score=47.58  Aligned_cols=77  Identities=23%  Similarity=0.329  Sum_probs=49.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE---EeCCCccHHHHHHH-Hh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC---INYKTEDFVARVKE-ET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~-~~  214 (335)
                      .+.++||          +|+++.+|.++++.+...|++|++++++.++.  ..+++....   .|-.+....+.+.+ ..
T Consensus         8 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            8 RDAVAVV----------TGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADLGDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             --CEEEE----------ETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHHTCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3578999          99999999999999888999999999855433  334443332   23333221111111 11


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                      ...++|++++++|
T Consensus        76 ~~g~id~lv~nAg   88 (257)
T 3tl3_A           76 TMGTLRIVVNCAG   88 (257)
T ss_dssp             HHSCEEEEEECGG
T ss_pred             HhCCCCEEEECCC
Confidence            1236999999998

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.32  E-value=0.048  Score=46.49  Aligned_cols=78  Identities=18%  Similarity=0.308  Sum_probs=50.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH-HHH----HcCCCEE-E--eCCCcc-HHH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCK----DLGADVC-I--NYKTED-FVA-  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~-~~~----~~g~~~~-~--~~~~~~-~~~-  208 (335)
                      .+.++||          +|++|.+|.+++..+...|++|++++++.++.. .++    ..+.... +  |-.+.. +.+ 
T Consensus        13 ~~k~vlI----------TGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~   82 (265)
T 1h5q_A           13 VNKTIIV----------TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   82 (265)
T ss_dssp             TTEEEEE----------ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHH
Confidence            4568999          999999999999999999999999998544332 222    2243322 2  333322 222 


Q ss_pred             --HHHHHhCCCcccEEEeCCCh
Q 019790          209 --RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 --~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+..  .++|++|.++|.
T Consensus        83 ~~~~~~~~--~~id~li~~Ag~  102 (265)
T 1h5q_A           83 IQQIDADL--GPISGLIANAGV  102 (265)
T ss_dssp             HHHHHHHS--CSEEEEEECCCC
T ss_pred             HHHHHHhc--CCCCEEEECCCc
Confidence              222222  369999998873

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.32  E-value=0.021  Score=47.67  Aligned_cols=101  Identities=18%  Similarity=0.178  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVAR  209 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~  209 (335)
                      ...++.+||-          .| + +.|..+..+++..  +.+|++++.+++..+.+++    .+...-+.....+..+.
T Consensus        66 ~~~~~~~vLd----------iG-~-G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~  133 (229)
T 2avd_A           66 RLIQAKKALD----------LG-T-FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALET  133 (229)
T ss_dssp             HHTTCCEEEE----------EC-C-TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred             HhcCCCEEEE----------Ec-C-CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHH
Confidence            3456778888          77 3 3788899999886  5799999999888777764    24310011111233333


Q ss_pred             HHHHhCC---CcccEEEeCCCh----hhHHHhhccccCCCEEEEEe
Q 019790          210 VKEETGG---KGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       210 ~~~~~~~---~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +.+....   ..||+|+-....    ..+..+.+.|+++|.++...
T Consensus       134 ~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          134 LDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             HHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            3333211   479998865443    23677889999999988753

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.30  E-value=0.054  Score=46.64  Aligned_cols=78  Identities=28%  Similarity=0.410  Sum_probs=51.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHHH----HcCCCEE-E--eCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGADVC-I--NYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~~----~~g~~~~-~--~~~~~~-~--  206 (335)
                      ..+.++||          +||++.+|.++++.+...|++|+++ .++.+..+.+.    +.+.... +  |-.+.. +  
T Consensus        24 ~~~k~vlI----------TGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   93 (272)
T 4e3z_A           24 SDTPVVLV----------TGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAA   93 (272)
T ss_dssp             CCSCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            45778999          9999999999999999999999887 66666554432    3333222 2  333322 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..+  ++|++|.++|
T Consensus        94 ~~~~~~~~~g--~id~li~nAg  113 (272)
T 4e3z_A           94 MFSAVDRQFG--RLDGLVNNAG  113 (272)
T ss_dssp             HHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHhCC--CCCEEEECCC
Confidence             222333332  6899999887

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.29  E-value=0.038  Score=47.29  Aligned_cols=77  Identities=22%  Similarity=0.333  Sum_probs=50.6

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHHHH-cCCCEEE--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~-~---  206 (335)
                      .+.++||          +|++  +.+|.++++.+...|++|++++++++   ..+.+.+ .+....+  |-.+.. +   
T Consensus         7 ~~k~vlV----------TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~   76 (261)
T 2wyu_A            7 SGKKALV----------MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDAL   76 (261)
T ss_dssp             TTCEEEE----------ESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHH
Confidence            4678999          9998  89999999988888999999998875   2333332 3432333  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  .++|++|+++|
T Consensus        77 ~~~~~~~~--g~iD~lv~~Ag   95 (261)
T 2wyu_A           77 FAGVKEAF--GGLDYLVHAIA   95 (261)
T ss_dssp             HHHHHHHH--SSEEEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCC
Confidence            12222222  26999999987

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=95.29  E-value=0.047  Score=44.34  Aligned_cols=97  Identities=14%  Similarity=0.149  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCC--CE-EEeCCCcc
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGA--DV-CINYKTED  205 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~--~~-~~~~~~~~  205 (335)
                      ..++++++||-          .| +| .|..+..+++..+  .+|++++.+++..+.+++    .+.  .. ++..+...
T Consensus        18 ~~~~~~~~vLD----------lG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~   85 (197)
T 3eey_A           18 MFVKEGDTVVD----------AT-CG-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQN   85 (197)
T ss_dssp             HHCCTTCEEEE----------SC-CT-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGG
T ss_pred             hcCCCCCEEEE----------cC-CC-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence            45678889988          77 34 4788888888864  599999999988877754    232  22 22222111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh----------------hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +    ... ....||+|+-+.+-                ..+..+.+.|+++|+++...
T Consensus        86 ~----~~~-~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~  139 (197)
T 3eey_A           86 M----DKY-IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI  139 (197)
T ss_dssp             G----GGT-CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             H----hhh-ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence            1    111 22479999865422                34677889999999998764

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.29  E-value=0.047  Score=51.27  Aligned_cols=92  Identities=15%  Similarity=0.176  Sum_probs=67.9

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      .-.|.++.|          .| .|.+|..+++.++.+|++|++.+++..+...+...|.. +.     +    +.+..  
T Consensus       274 ~L~GktVgI----------IG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~~-----~----l~ell--  330 (494)
T 3d64_A          274 MIAGKIAVV----------AG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-VV-----T----MEYAA--  330 (494)
T ss_dssp             CCTTCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-EC-----C----HHHHT--
T ss_pred             ccCCCEEEE----------Ec-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-eC-----C----HHHHH--
Confidence            356788988          87 89999999999999999999999988765444445543 21     1    23333  


Q ss_pred             CcccEEEeCCChhh-H-HHhhccccCCCEEEEEeccC
Q 019790          217 KGVDVILDCMGASY-F-QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       217 ~~~d~vid~~g~~~-~-~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +..|+|+.+++... + ...+..|+++..++.+|...
T Consensus       331 ~~aDiVi~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          331 DKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             TTCSEEEECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             hcCCEEEECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            25899999986543 2 46778899998888887644

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.26  E-value=0.092  Score=45.29  Aligned_cols=85  Identities=22%  Similarity=0.281  Sum_probs=59.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      +.+++|          +| +|++|.+++..+...|.+|++..|+.++.+.+.+++.. .....+.            ..+
T Consensus       118 ~k~vlv----------lG-aGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~l------------~~~  173 (269)
T 3phh_A          118 YQNALI----------LG-AGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPPK------------SAF  173 (269)
T ss_dssp             CCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCCS------------SCC
T ss_pred             CCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHHh------------ccC
Confidence            788999          88 69999999999999999999999999887766676642 3322211            158


Q ss_pred             cEEEeCCChhh-----H-HH-hhccccCCCEEEEEe
Q 019790          220 DVILDCMGASY-----F-QR-NLGSLNIDGRLFIIG  248 (335)
Q Consensus       220 d~vid~~g~~~-----~-~~-~~~~l~~~G~~v~~g  248 (335)
                      |+||+|++...     + .. ....++++..++.+.
T Consensus       174 DiVInaTp~Gm~~~~~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          174 DLIINATSASLHNELPLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             SEEEECCTTCCCCSCSSCHHHHHHHHHHCSEEEESC
T ss_pred             CEEEEcccCCCCCCCCCChHHHHhhCCCCCEEEEeC
Confidence            99999987531     1 11 112456666666553

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.26  E-value=0.042  Score=48.69  Aligned_cols=77  Identities=21%  Similarity=0.188  Sum_probs=52.3

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-----CCCE-EE---eCCCccHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-----GADV-CI---NYKTEDFV  207 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-----g~~~-~~---~~~~~~~~  207 (335)
                      ..++.+|||          +|++|.+|..++..+...|++|++++++..+.+.+.+.     +... .+   |..+..  
T Consensus         8 ~~~~~~vlV----------TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~--   75 (342)
T 1y1p_A            8 LPEGSLVLV----------TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG--   75 (342)
T ss_dssp             SCTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT--
T ss_pred             CCCCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH--
Confidence            345778999          99999999999999988999999999987765544321     2222 12   322221  


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+..  .++|+||.+++.
T Consensus        76 -~~~~~~--~~~d~vih~A~~   93 (342)
T 1y1p_A           76 -AYDEVI--KGAAGVAHIASV   93 (342)
T ss_dssp             -TTTTTT--TTCSEEEECCCC
T ss_pred             -HHHHHH--cCCCEEEEeCCC
Confidence             222222  268999998863

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.26  E-value=0.093  Score=41.94  Aligned_cols=98  Identities=12%  Similarity=0.166  Sum_probs=65.2

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--CEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~~~~~~~~~~~  206 (335)
                      ....+.++.+||.          .| +|. |..+..+++.. .+|++++.+++..+.+++    .+.  ...+  ...++
T Consensus        27 ~~~~~~~~~~vld----------iG-~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~--~~~d~   91 (192)
T 1l3i_A           27 CLAEPGKNDVAVD----------VG-CGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTL--MEGDA   91 (192)
T ss_dssp             HHHCCCTTCEEEE----------ES-CTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEE--EESCH
T ss_pred             HhcCCCCCCEEEE----------EC-CCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEE--EecCH
Confidence            4456788899988          77 444 88888888876 899999999988877764    333  2111  11233


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEEe
Q 019790          207 VARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .+.+   .....||+|+.....    ..+..+.+.|+++|+++...
T Consensus        92 ~~~~---~~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           92 PEAL---CKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             HHHH---TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             HHhc---ccCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            2212   111379999976542    33567788999999998764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.26  E-value=0.059  Score=43.94  Aligned_cols=63  Identities=21%  Similarity=0.331  Sum_probs=45.1

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccE
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV  221 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~  221 (335)
                      ++||          +||+|.+|..+++.+. .|++|+++.++++          ....|-.+....+.+.+..  .++|+
T Consensus         5 ~vlV----------tGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------~~~~D~~~~~~~~~~~~~~--~~~d~   61 (202)
T 3d7l_A            5 KILL----------IGASGTLGSAVKERLE-KKAEVITAGRHSG----------DVTVDITNIDSIKKMYEQV--GKVDA   61 (202)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------SEECCTTCHHHHHHHHHHH--CCEEE
T ss_pred             EEEE----------EcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------ceeeecCCHHHHHHHHHHh--CCCCE
Confidence            6899          9999999999999988 8999999998754          1233444433222222222  36899


Q ss_pred             EEeCCC
Q 019790          222 ILDCMG  227 (335)
Q Consensus       222 vid~~g  227 (335)
                      +|.++|
T Consensus        62 vi~~ag   67 (202)
T 3d7l_A           62 IVSATG   67 (202)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999887

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.24  E-value=0.033  Score=47.38  Aligned_cols=77  Identities=14%  Similarity=0.220  Sum_probs=50.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecCh--hhHHHHHHc--CCCE-E--EeCCCc-c-HH-
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE--EKLAVCKDL--GADV-C--INYKTE-D-FV-  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~--~~~~~~~~~--g~~~-~--~~~~~~-~-~~-  207 (335)
                      .+.++||          +||++.+|.++++.+...|++ |+++++++  +..+.+.+.  +... .  .|-.+. . +. 
T Consensus         4 ~~k~vlV----------tGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            4 TNKNVIF----------VAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred             CCcEEEE----------ECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHH
Confidence            3578999          999999999999999999996 89888875  334444432  2211 1  233333 2 22 


Q ss_pred             --HHHHHHhCCCcccEEEeCCC
Q 019790          208 --ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 --~~~~~~~~~~~~d~vid~~g  227 (335)
                        +.+.+..  .++|++|+++|
T Consensus        74 ~~~~~~~~~--g~id~lv~~Ag   93 (254)
T 1sby_A           74 LLKKIFDQL--KTVDILINGAG   93 (254)
T ss_dssp             HHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHhc--CCCCEEEECCc
Confidence              2222223  26999999987

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.24  E-value=0.038  Score=47.16  Aligned_cols=77  Identities=23%  Similarity=0.311  Sum_probs=50.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHH-HcCCCEE-E--eCCCccH----HHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK-DLGADVC-I--NYKTEDF----VAR  209 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~-~~g~~~~-~--~~~~~~~----~~~  209 (335)
                      +.++||          +|+++.+|.++++.+...  |++|+.+.+++++.+.+. +++.... +  |-.+...    .+.
T Consensus         2 gk~~lV----------TGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILV----------TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEE----------CSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEE----------ECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            467899          999999999988777666  478999999988776664 3443222 2  3333221    222


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+..  .++|++++++|.
T Consensus        72 ~~~~~--g~id~lvnnAg~   88 (254)
T 3kzv_A           72 AVKGH--GKIDSLVANAGV   88 (254)
T ss_dssp             HHHHH--SCCCEEEEECCC
T ss_pred             HHHhc--CCccEEEECCcc
Confidence            23333  269999998873

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.24  E-value=0.046  Score=47.11  Aligned_cols=93  Identities=12%  Similarity=0.106  Sum_probs=58.9

Q ss_pred             ccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh----
Q 019790          156 HGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS----  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~----  229 (335)
                      +|++|.+|..+++.+...  |++|+++++++++.+.+...+... +..+-.+ .+.+.+...  ++|+||.+++..    
T Consensus         5 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~D~~d-~~~~~~~~~--~~d~vi~~a~~~~~~~   80 (286)
T 2zcu_A            5 TGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITV-RQADYGD-EAALTSALQ--GVEKLLLISSSEVGQR   80 (286)
T ss_dssp             ESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEE-EECCTTC-HHHHHHHTT--TCSEEEECC-------
T ss_pred             EcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeE-EEcCCCC-HHHHHHHHh--CCCEEEEeCCCCchHH
Confidence            999999999999998887  999999999877655554444433 2222222 234455543  589999998742    


Q ss_pred             --hHHHhhccccC--CCEEEEEeccCC
Q 019790          230 --YFQRNLGSLNI--DGRLFIIGTQGG  252 (335)
Q Consensus       230 --~~~~~~~~l~~--~G~~v~~g~~~~  252 (335)
                        .....++.+..  -++++.++....
T Consensus        81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~  107 (286)
T 2zcu_A           81 APQHRNVINAAKAAGVKFIAYTSLLHA  107 (286)
T ss_dssp             -CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence              12333444432  258888876543

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.21  E-value=0.076  Score=46.83  Aligned_cols=87  Identities=13%  Similarity=0.198  Sum_probs=64.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          +| .|.+|...++.++..|++|++.+++.+. +.+.+.|... .     ++.+.+ +     .
T Consensus       141 ~g~~vgI----------iG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~-----~l~ell-~-----~  196 (307)
T 1wwk_A          141 EGKTIGI----------IG-FGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-V-----DLETLL-K-----E  196 (307)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-C-----CHHHHH-H-----H
T ss_pred             CCceEEE----------Ec-cCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-c-----CHHHHH-h-----h
Confidence            4678888          77 8999999999999999999999988766 4556677632 1     222222 1     4


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+.+++...     + ...+..+++++.++.++.
T Consensus       197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~ar  233 (307)
T 1wwk_A          197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSR  233 (307)
T ss_dssp             CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence            799999987532     1 346778899998888865

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.21  E-value=0.036  Score=46.84  Aligned_cols=75  Identities=25%  Similarity=0.276  Sum_probs=48.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCcc-H---HHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTED-F---VARVK  211 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~---~~~~~  211 (335)
                      ..+.++||          +|+++.+|.++++.+...|++|+++++++++.+     +....+  |-.+.. +   .+.+.
T Consensus         5 ~~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~   69 (241)
T 1dhr_A            5 GEARRVLV----------YGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVG   69 (241)
T ss_dssp             -CCCEEEE----------ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCCCEEEE----------ECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHH
Confidence            34678999          999999999999999999999999998865432     111111  211111 1   12222


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +..+..++|++|+++|
T Consensus        70 ~~~~~g~iD~lv~~Ag   85 (241)
T 1dhr_A           70 KLLGDQKVDAILCVAG   85 (241)
T ss_dssp             HHHTTCCEEEEEECCC
T ss_pred             HHhCCCCCCEEEEccc
Confidence            2232136999999987

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.16  E-value=0.036  Score=47.19  Aligned_cols=78  Identities=29%  Similarity=0.321  Sum_probs=49.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhH----HHHHHcCCC-EEE--eCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKL----AVCKDLGAD-VCI--NYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~----~~~~~~g~~-~~~--~~~~~~-~--  206 (335)
                      .++.++||          +||++.+|.+++..+...|++|++++ ++.++.    +.+++.+.. ..+  |-.+.+ +  
T Consensus        11 ~~~k~vlI----------TGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   80 (256)
T 3ezl_A           11 MSQRIAYV----------TGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQ   80 (256)
T ss_dssp             --CEEEEE----------TTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHH
T ss_pred             CCCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHH
Confidence            56788999          99999999999999999999999987 443332    223334433 222  222222 1  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..  .++|++|.++|
T Consensus        81 ~~~~~~~~~--g~id~lv~~Ag  100 (256)
T 3ezl_A           81 AFDKVKAEV--GEIDVLVNNAG  100 (256)
T ss_dssp             HHHHHHHHT--CCEEEEEECCC
T ss_pred             HHHHHHHhc--CCCCEEEECCC
Confidence             22333333  26999999987

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.16  E-value=0.13  Score=45.83  Aligned_cols=76  Identities=18%  Similarity=0.148  Sum_probs=51.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh----hHHHHHHc------CCCEEEeCCCccHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCKDL------GADVCINYKTEDFVAR  209 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~----~~~~~~~~------g~~~~~~~~~~~~~~~  209 (335)
                      +.+|||          +||+|.+|..+++.+...|.+|++++++..    ....+...      ..-..+..+-.+ .+.
T Consensus        25 ~~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~   93 (351)
T 3ruf_A           25 PKTWLI----------TGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD-LTT   93 (351)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC-HHH
T ss_pred             CCeEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC-HHH
Confidence            578999          999999999999999999999999998543    33333332      211223222222 234


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+...  ++|+||.+++.
T Consensus        94 ~~~~~~--~~d~Vih~A~~  110 (351)
T 3ruf_A           94 CEQVMK--GVDHVLHQAAL  110 (351)
T ss_dssp             HHHHTT--TCSEEEECCCC
T ss_pred             HHHHhc--CCCEEEECCcc
Confidence            555543  69999999873

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.16  E-value=0.24  Score=43.06  Aligned_cols=73  Identities=12%  Similarity=0.177  Sum_probs=50.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcC-----CCEEEeCCCccHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLG-----ADVCINYKTEDFVARV  210 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g-----~~~~~~~~~~~~~~~~  210 (335)
                      -.+.+++|          +| +|++|.+++..+...|+ +|+++.|+.++.+.+. +++     ... ......++.+.+
T Consensus       125 l~~k~vlV----------lG-aGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i-~~~~~~~l~~~l  192 (283)
T 3jyo_A          125 AKLDSVVQ----------VG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVDARGIEDVI  192 (283)
T ss_dssp             CCCSEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCE-EEECSTTHHHHH
T ss_pred             cCCCEEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceE-EEcCHHHHHHHH
Confidence            45778999          88 59999999999999999 7999999988776553 222     222 111212333222


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .      .+|+||+|++.
T Consensus       193 ~------~~DiVInaTp~  204 (283)
T 3jyo_A          193 A------AADGVVNATPM  204 (283)
T ss_dssp             H------HSSEEEECSST
T ss_pred             h------cCCEEEECCCC
Confidence            1      48999999974

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.15  E-value=0.054  Score=46.63  Aligned_cols=100  Identities=23%  Similarity=0.362  Sum_probs=63.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCEE-E--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC-I--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~~-~--~~~~~~~----  206 (335)
                      .+.++||          +||++++|.++++.+...|++|+++. ++++..+.+    +..+.... +  |-.+...    
T Consensus        26 ~~k~~lV----------TGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   95 (267)
T 3u5t_A           26 TNKVAIV----------TGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRL   95 (267)
T ss_dssp             -CCEEEE----------ESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence            5678999          99999999999998888899999874 444444333    33444332 2  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEecc
Q 019790          207 VARVKEETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~  250 (335)
                      .+.+.+..+  ++|++++++|..           .+               +.+++.++.+|+++.++..
T Consensus        96 ~~~~~~~~g--~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A           96 FATAEEAFG--GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             HHHHHHHHS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             HHHHHHHcC--CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            222333332  699999998731           01               2344556668999988654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.15  E-value=0.045  Score=47.54  Aligned_cols=77  Identities=14%  Similarity=0.243  Sum_probs=50.6

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChh---hHHHHHH-cCCCEEE--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVCKD-LGADVCI--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~---~~~~~~~-~g~~~~~--~~~~~~~----  206 (335)
                      .+.++||          +|++  +.+|.++++.+...|++|++++++++   ..+.+.+ .+....+  |-.+...    
T Consensus        20 ~~k~vlV----------TGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~   89 (285)
T 2p91_A           20 EGKRALI----------TGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNL   89 (285)
T ss_dssp             TTCEEEE----------CCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHH
Confidence            4678999          9998  89999999999899999999998875   2333322 3322222  3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  .++|++|+++|
T Consensus        90 ~~~~~~~~--g~iD~lv~~Ag  108 (285)
T 2p91_A           90 KKFLEENW--GSLDIIVHSIA  108 (285)
T ss_dssp             HHHHHHHT--SCCCEEEECCC
T ss_pred             HHHHHHHc--CCCCEEEECCC
Confidence            12222222  36999999887

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.14  E-value=0.055  Score=47.56  Aligned_cols=75  Identities=19%  Similarity=0.199  Sum_probs=48.1

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETG  215 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~  215 (335)
                      .++..++||          +||+|.+|..+++.+...|++|++++++... +.   ++...+ .|..+.   +.+.+...
T Consensus         9 ~~~~~~vlV----------TGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~---~~~~~~~~   71 (321)
T 2pk3_A            9 HHGSMRALI----------TGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDS---QRVKKVIS   71 (321)
T ss_dssp             ----CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCH---HHHHHHHH
T ss_pred             ccCcceEEE----------ECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCH---HHHHHHHH
Confidence            355678999          9999999999999999999999999987654 21   222111 132222   22333322


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                      +.++|+||.+++.
T Consensus        72 ~~~~d~vih~A~~   84 (321)
T 2pk3_A           72 DIKPDYIFHLAAK   84 (321)
T ss_dssp             HHCCSEEEECCSC
T ss_pred             hcCCCEEEEcCcc
Confidence            2358999999873

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.14  E-value=0.059  Score=46.33  Aligned_cols=72  Identities=25%  Similarity=0.413  Sum_probs=49.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC--EEEeCCCcc----HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTED----FVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~--~~~~~~~~~----~~~~~~~  212 (335)
                      .|.++||          +|+++++|.+.++.+-..|++|+++.+++++.     ....  ...|-.+.+    +.+.+.+
T Consensus        10 ~GK~alV----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A           10 RGKRALI----------TAGTKGAGAATVSLFLELGAQVLTTARARPEG-----LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             TTCEEEE----------SCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            6789999          99999999999999999999999999875421     1111  122333322    2233333


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      ..  .++|++++++|
T Consensus        75 ~~--G~iDilVnnAG   87 (261)
T 4h15_A           75 RL--GGVDVIVHMLG   87 (261)
T ss_dssp             HT--SSCSEEEECCC
T ss_pred             Hc--CCCCEEEECCC
Confidence            33  36999999876

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.11  E-value=0.028  Score=49.79  Aligned_cols=80  Identities=15%  Similarity=0.061  Sum_probs=48.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH--HHHHHc----CCCEE-EeCCCccHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDL----GADVC-INYKTEDFVA  208 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~----g~~~~-~~~~~~~~~~  208 (335)
                      +-+++.+|||          +||+|.+|..+++.+...|.+|++++++....  ..+..+    +...+ .|..+.   +
T Consensus        10 ~~~~~~~vlV----------TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~   76 (335)
T 1rpn_A           10 HGSMTRSALV----------TGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA---C   76 (335)
T ss_dssp             -----CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCH---H
T ss_pred             ccccCCeEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCH---H
Confidence            3467889999          99999999999999998999999999875431  222222    11111 132222   2


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+...+.++|+||.+++.
T Consensus        77 ~~~~~~~~~~~d~Vih~A~~   96 (335)
T 1rpn_A           77 SVQRAVIKAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHHHHHHHHCCSEEEECCSC
T ss_pred             HHHHHHHHcCCCEEEECccc
Confidence            23333222257999998873

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.10  E-value=0.089  Score=45.34  Aligned_cols=91  Identities=16%  Similarity=0.194  Sum_probs=59.8

Q ss_pred             ccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCCcccEEEeCCChh---
Q 019790          156 HGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGAS---  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---  229 (335)
                      +|++|.+|..+++.+...  |.+|+++++++.+.+.+...+...+. |..+   .+.+.+...  ++|+||.+++..   
T Consensus         6 tGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d---~~~l~~~~~--~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            6 TGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQ---PESLQKAFA--GVSKLLFISGPHYDN   80 (287)
T ss_dssp             TTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTC---HHHHHHHTT--TCSEEEECCCCCSCH
T ss_pred             EcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCC---HHHHHHHHh--cCCEEEEcCCCCcCc
Confidence            999999999999988888  89999999987766655544443321 2222   234555543  589999988741   


Q ss_pred             -----hHHHhhccccCC--CEEEEEeccC
Q 019790          230 -----YFQRNLGSLNID--GRLFIIGTQG  251 (335)
Q Consensus       230 -----~~~~~~~~l~~~--G~~v~~g~~~  251 (335)
                           .....++.+...  ++++.++...
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence                 122334444333  5888887644

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.10  E-value=0.14  Score=45.31  Aligned_cols=89  Identities=16%  Similarity=0.127  Sum_probs=63.1

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCC
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .+|.|          +| .|.+|.+.++.++..|.  +|++.++++++.+.+.+.|.. ...... ...      ..  .
T Consensus        34 ~kI~I----------IG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~-~~~------~~--~   93 (314)
T 3ggo_A           34 QNVLI----------VG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI-AKV------ED--F   93 (314)
T ss_dssp             SEEEE----------ES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT-TGG------GG--G
T ss_pred             CEEEE----------Ee-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH-HHH------hh--c
Confidence            57888          87 89999999999999998  999999999999888888763 222211 110      11  2


Q ss_pred             cccEEEeCCChhhHH----HhhccccCCCEEEEEec
Q 019790          218 GVDVILDCMGASYFQ----RNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       218 ~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~g~  249 (335)
                      ..|+||-|+......    .....++++..++.++.
T Consensus        94 ~aDvVilavp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A           94 SPDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             cCCEEEEeCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            589999999876543    34445666666666543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.09  E-value=0.13  Score=44.61  Aligned_cols=96  Identities=15%  Similarity=0.070  Sum_probs=64.5

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||........|.+...--.|.+++|          .|++..+|.-+++++...|++|++..+..               
T Consensus       139 ~PcTp~gi~~ll~~~~i~l~gk~vvV----------IG~s~iVG~p~A~lL~~~gAtVtv~hs~t---------------  193 (288)
T 1b0a_A          139 RPCTPRGIVTLLERYNIDTFGLNAVV----------IGASNIVGRPMSMELLLAGCTTTVTHRFT---------------  193 (288)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEE----------ECCCTTTHHHHHHHHHTTTCEEEEECSSC---------------
T ss_pred             CCCcHHHHHHHHHHcCCCCCCCEEEE----------ECCChHHHHHHHHHHHHCCCeEEEEeCCc---------------
Confidence            44444444444533333346788888          88766789999999999999999885322               


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                          .+..+.++      .+|++|.++|...+ ---+.++++..++.+|...
T Consensus       194 ----~~L~~~~~------~ADIVI~Avg~p~l-I~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          194 ----KNLRHHVE------NADLLIVAVGKPGF-IPGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             ----SCHHHHHH------HCSEEEECSCCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred             ----hhHHHHhc------cCCEEEECCCCcCc-CCHHHcCCCcEEEEccCCc
Confidence                23333332      48999999998653 1234578888888888654

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.08  E-value=0.035  Score=46.18  Aligned_cols=100  Identities=19%  Similarity=0.175  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVAR  209 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~  209 (335)
                      ...++.+||-          .|  ++.|..+..+++.+  +.+|++++.+++..+.+++    .+....+.....+..+.
T Consensus        61 ~~~~~~~vLd----------iG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~  128 (225)
T 3tr6_A           61 KLMQAKKVID----------IG--TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT  128 (225)
T ss_dssp             HHHTCSEEEE----------EC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred             HhhCCCEEEE----------eC--CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH
Confidence            3456778888          76  44588888999886  5799999999988777754    34321011111223333


Q ss_pred             HHHHhCC---CcccEEEeCCChh----hHHHhhccccCCCEEEEE
Q 019790          210 VKEETGG---KGVDVILDCMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~~---~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      +......   ..||+|+-.....    .+..+.+.|+++|.++.-
T Consensus       129 ~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  173 (225)
T 3tr6_A          129 LAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVD  173 (225)
T ss_dssp             HHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence            3333221   4799999544432    256778999999999864

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.08  E-value=0.039  Score=46.97  Aligned_cols=98  Identities=18%  Similarity=0.215  Sum_probs=63.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc-HHHHHHHHh-CCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEET-GGK  217 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~-~~~  217 (335)
                      +.++||          +||++.+|.++++.+...|++|+++++++++.+.     ....++-.+.. ..+.+.+.. ...
T Consensus        22 ~k~vlI----------TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-----~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           22 SKNILV----------LGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-----HSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-----EEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----cceEEEeCCHHHHHHHHHHHHHHcC
Confidence            568999          9999999999999999999999999988764321     11222323322 222222221 123


Q ss_pred             cccEEEeCCCh--------h----h---------------HHHhhccccCCCEEEEEeccCC
Q 019790          218 GVDVILDCMGA--------S----Y---------------FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       218 ~~d~vid~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      ++|++|.++|.        .    .               ...+...++++|+++.++....
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  148 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA  148 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence            68999999872        0    0               1233455566789999876543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.07  E-value=0.066  Score=46.93  Aligned_cols=70  Identities=14%  Similarity=0.176  Sum_probs=49.4

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|||          +||+|.+|..+++.+...|.+|++++|++...+ +.  +.. .+.. +.. .+.+.+...  ++|
T Consensus         3 ~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~-~~~~-Dl~-~~~~~~~~~--~~d   64 (311)
T 3m2p_A            3 LKIAV----------TGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYE-YRVS-DYT-LEDLINQLN--DVD   64 (311)
T ss_dssp             CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCE-EEEC-CCC-HHHHHHHTT--TCS
T ss_pred             CEEEE----------ECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceE-EEEc-ccc-HHHHHHhhc--CCC
Confidence            57999          999999999999999999999999999854444 33  332 2222 222 456666654  799


Q ss_pred             EEEeCCCh
Q 019790          221 VILDCMGA  228 (335)
Q Consensus       221 ~vid~~g~  228 (335)
                      +||.+++.
T Consensus        65 ~Vih~a~~   72 (311)
T 3m2p_A           65 AVVHLAAT   72 (311)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcccc
Confidence            99998874

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.05  E-value=0.0075  Score=51.40  Aligned_cols=97  Identities=22%  Similarity=0.177  Sum_probs=65.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC--E-EEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--V-CINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~  205 (335)
                      ....+.++.+||-          .| +| .|..+..+++..|++|++++.++...+.+++    .+..  . ....+...
T Consensus        30 ~~~~~~~~~~VLD----------iG-cG-~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~   97 (256)
T 1nkv_A           30 RVLRMKPGTRILD----------LG-SG-SGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG   97 (256)
T ss_dssp             HHTCCCTTCEEEE----------ET-CT-TCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred             HhcCCCCCCEEEE----------EC-CC-CCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence            5567889999998          77 33 4888889998889999999999988777753    3321  2 22222111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC-------hhhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMG-------ASYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .       .....||+|+-.-.       ...+..+.+.|+|+|+++...
T Consensus        98 ~-------~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A           98 Y-------VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             C-------CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             C-------CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            1       11347999985221       123677889999999998764

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=95.02  E-value=0.1  Score=46.42  Aligned_cols=101  Identities=16%  Similarity=0.158  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHHc----C------------
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDL----G------------  194 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~----g------------  194 (335)
                      ....+.++++||-          .| +|. |..+..+++..|  .+|++++.++...+.+++.    +            
T Consensus        99 ~~l~~~~g~~VLD----------iG-~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~  166 (336)
T 2b25_A           99 SMMDINPGDTVLE----------AG-SGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP  166 (336)
T ss_dssp             HHHTCCTTCEEEE----------EC-CTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCC
T ss_pred             HhcCCCCCCEEEE----------eC-CCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccC
Confidence            4457889999998          77 444 888888888766  6899999999887777542    1            


Q ss_pred             CC-EEEeCCCccHHHHHHHHhCCCcccEEEeCCChh--hHHHhhccccCCCEEEEEec
Q 019790          195 AD-VCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       195 ~~-~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .. .+...+.......+    ....||+|+-.....  .+..+.+.|+++|+++....
T Consensus       167 ~~v~~~~~d~~~~~~~~----~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          167 DNVDFIHKDISGATEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             CCEEEEESCTTCCC-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             CceEEEECChHHccccc----CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence            11 12222221111011    123699998765543  36888999999999987643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.02  E-value=0.0045  Score=53.53  Aligned_cols=73  Identities=22%  Similarity=0.330  Sum_probs=48.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH----HHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF----VARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~  214 (335)
                      .+.++||          +||++.+|.++++.+...|++|++++++.+..+.....    ..|-.+...    .+.+.+..
T Consensus        27 ~gk~vlV----------TGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~   92 (266)
T 3uxy_A           27 EGKVALV----------TGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGL   92 (266)
T ss_dssp             TTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhc
Confidence            4678999          99999999999999999999999999876543221111    112222221    22233333


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                        .++|++++++|
T Consensus        93 --g~iD~lvnnAg  103 (266)
T 3uxy_A           93 --GRLDIVVNNAG  103 (266)
T ss_dssp             --SCCCEEEECCC
T ss_pred             --CCCCEEEECCC
Confidence              26999999887

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.02  E-value=0.016  Score=49.37  Aligned_cols=74  Identities=30%  Similarity=0.333  Sum_probs=50.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHH----HHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV----ARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~  214 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++.+.+.  +  ...|-.+.+..    +.+.+..
T Consensus        14 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           14 VSRSVLV----------TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHc
Confidence            4678999          999999999999999999999999998765433221  1  23344443221    2222222


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                        .++|++|+++|.
T Consensus        80 --g~id~lv~~Ag~   91 (247)
T 1uzm_A           80 --GPVEVLVSNAGL   91 (247)
T ss_dssp             --SSCSEEEEECSC
T ss_pred             --CCCCEEEECCCC
Confidence              268999998873

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.01  E-value=0.15  Score=44.53  Aligned_cols=96  Identities=15%  Similarity=0.077  Sum_probs=63.3

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI  199 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~  199 (335)
                      +||........|.+...--.|.+++|          .|++..+|.-+++++...|++|++..+.                
T Consensus       145 ~PcTp~gi~~ll~~~~i~l~gk~vvV----------IG~s~iVG~p~A~lL~~~gAtVtv~hs~----------------  198 (301)
T 1a4i_A          145 IPCTPKGCLELIKETGVPIAGRHAVV----------VGRSKIVGAPMHDLLLWNNATVTTCHSK----------------  198 (301)
T ss_dssp             CCHHHHHHHHHHHTTTCCCTTCEEEE----------ECCCTTTHHHHHHHHHHTTCEEEEECTT----------------
T ss_pred             cCchHHHHHHHHHHcCCCCCCCEEEE----------ECCCchHHHHHHHHHHhCCCeEEEEECC----------------
Confidence            34333333334433222246788888          8866679999999999999999887522                


Q ss_pred             eCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          200 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                         +.++    .+.+  +.+|+||.++|...+ ---+.++++..++.+|...
T Consensus       199 ---t~~L----~~~~--~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          199 ---TAHL----DEEV--NKGDILVVATGQPEM-VKGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             ---CSSH----HHHH--TTCSEEEECCCCTTC-BCGGGSCTTCEEEECCCBC
T ss_pred             ---cccH----HHHh--ccCCEEEECCCCccc-CCHHHcCCCcEEEEccCCC
Confidence               2222    3333  258999999998653 2234578888889888654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.01  E-value=0.046  Score=48.46  Aligned_cols=76  Identities=17%  Similarity=0.206  Sum_probs=49.3

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH--HHHHHcCC--CE-EE--eCCCccHHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDLGA--DV-CI--NYKTEDFVARVKE  212 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~g~--~~-~~--~~~~~~~~~~~~~  212 (335)
                      +.++||          +||+|.+|..+++.+...|++|++++++....  +.+..++.  .. .+  |..+.   +.+.+
T Consensus         3 ~~~vlV----------tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~   69 (345)
T 2z1m_A            3 GKRALI----------TGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEF---SNIIR   69 (345)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCH---HHHHH
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCH---HHHHH
Confidence            568999          99999999999999888999999999876532  23333321  11 22  22222   22222


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ...+.++|+||.+++.
T Consensus        70 ~~~~~~~d~vih~A~~   85 (345)
T 2z1m_A           70 TIEKVQPDEVYNLAAQ   85 (345)
T ss_dssp             HHHHHCCSEEEECCCC
T ss_pred             HHHhcCCCEEEECCCC
Confidence            2221157999999873

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=94.97  E-value=0.052  Score=45.30  Aligned_cols=95  Identities=18%  Similarity=0.139  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-------CeEEEEecChhhHHHHHHc----C-------CCE
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-------VRVFVTAGSEEKLAVCKDL----G-------ADV  197 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-------~~V~~~~~~~~~~~~~~~~----g-------~~~  197 (335)
                      .+.++++||.          .| +|. |..+..+++..+       .+|++++.+++..+.+++.    +       .-.
T Consensus        81 ~~~~~~~VLd----------iG-~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~  148 (227)
T 1r18_A           81 HLKPGARILD----------VG-SGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL  148 (227)
T ss_dssp             TCCTTCEEEE----------ES-CTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred             hCCCCCEEEE----------EC-CCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE
Confidence            5788999998          77 444 888888888776       4999999998877776532    1       112


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                      +...+...   .   ......||+|+.+..... ...+.+.|+++|+++..-
T Consensus       149 ~~~~d~~~---~---~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~  194 (227)
T 1r18_A          149 IVEGDGRK---G---YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVPV  194 (227)
T ss_dssp             EEESCGGG---C---CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             EEECCccc---C---CCcCCCccEEEECCchHHHHHHHHHHhcCCCEEEEEE
Confidence            22221111   0   111247999998766544 477889999999997653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.96  E-value=0.036  Score=46.66  Aligned_cols=73  Identities=19%  Similarity=0.278  Sum_probs=47.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCcc-H---HHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTED-F---VARVKEE  213 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~---~~~~~~~  213 (335)
                      +.++||          +|+++.+|.++++.+...|++|+++++++++.+     +....+  |-.+.. +   .+.+.+.
T Consensus         3 ~k~vlI----------TGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   67 (236)
T 1ooe_A            3 SGKVIV----------YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASS   67 (236)
T ss_dssp             CEEEEE----------ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHH
Confidence            567899          999999999999999999999999998865432     111122  111111 1   1222222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .+..++|++|+++|
T Consensus        68 ~~~g~id~lv~~Ag   81 (236)
T 1ooe_A           68 LQGSQVDGVFCVAG   81 (236)
T ss_dssp             HTTCCEEEEEECCC
T ss_pred             hCCCCCCEEEECCc
Confidence            32137999999988

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=94.95  E-value=0.37  Score=44.15  Aligned_cols=110  Identities=12%  Similarity=0.163  Sum_probs=68.7

Q ss_pred             HHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-----------c
Q 019790          126 TVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-----------L  193 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-----------~  193 (335)
                      ..+..+....++.++++||=          +|  ++.|..++++|+..|+ +|++++.++...+.+++           .
T Consensus       160 ~~i~~il~~l~l~~gd~VLD----------LG--CGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~  227 (438)
T 3uwp_A          160 DLVAQMIDEIKMTDDDLFVD----------LG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY  227 (438)
T ss_dssp             HHHHHHHHHHCCCTTCEEEE----------ES--CTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEE----------eC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh
Confidence            33444556678899998877          76  6678888999988888 49999998765544432           2


Q ss_pred             CC--CE--EEeCCCccHHHHHHHHhCCCcccEEEeCC---Ch---hhHHHhhccccCCCEEEEEeccC
Q 019790          194 GA--DV--CINYKTEDFVARVKEETGGKGVDVILDCM---GA---SYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       194 g~--~~--~~~~~~~~~~~~~~~~~~~~~~d~vid~~---g~---~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      |.  ..  ++..+-....  .....  ..+|+||-..   ..   ..+...++.|++||+++..-...
T Consensus       228 Gl~~~rVefi~GD~~~lp--~~d~~--~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~  291 (438)
T 3uwp_A          228 GKKHAEYTLERGDFLSEE--WRERI--ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFA  291 (438)
T ss_dssp             TBCCCEEEEEECCTTSHH--HHHHH--HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred             CCCCCCeEEEECcccCCc--ccccc--CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence            32  22  2222222221  11111  1489998522   22   23566789999999999874433

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=94.94  E-value=0.15  Score=45.70  Aligned_cols=48  Identities=23%  Similarity=0.363  Sum_probs=39.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD  196 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~  196 (335)
                      -+|.++.|          .| .|.+|..+++.++..|++|++.+.+..+.+..+++++.
T Consensus       173 L~GktV~I----------~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~  220 (355)
T 1c1d_A          173 LDGLTVLV----------QG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT  220 (355)
T ss_dssp             STTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCCEEEE----------EC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCE
Confidence            47889999          87 89999999999999999999888777665555566653

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=94.84  E-value=0.087  Score=44.79  Aligned_cols=99  Identities=13%  Similarity=0.136  Sum_probs=62.5

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~  210 (335)
                      ..++.+||-          .|  ++.|..+..+++.+  +.+|+.++.+++..+.+++    .|...-+.....+..+.+
T Consensus        77 ~~~~~~VLe----------iG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l  144 (247)
T 1sui_A           77 LINAKNTME----------IG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL  144 (247)
T ss_dssp             HTTCCEEEE----------EC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred             hhCcCEEEE----------eC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH
Confidence            356678888          77  55688888888886  6799999999888777653    343110111112222322


Q ss_pred             HHHh----CCCcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790          211 KEET----GGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~----~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (335)
                      ....    ....||+||-....    ..+..+.+.|+++|.++.-
T Consensus       145 ~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  189 (247)
T 1sui_A          145 DEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYD  189 (247)
T ss_dssp             HHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEE
T ss_pred             HHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEe
Confidence            2221    12479999854432    2356788999999998764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=94.82  E-value=0.094  Score=45.04  Aligned_cols=78  Identities=22%  Similarity=0.348  Sum_probs=50.2

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCC-EEE--eCCCccH---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGAD-VCI--NYKTEDF---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~-~~~--~~~~~~~---  206 (335)
                      ..+.++||          +||++.+|.++++.+...|++|+++. ++.+..+..    +..+.. ..+  |-.+...   
T Consensus        23 ~~~k~vlI----------TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~   92 (269)
T 3gk3_A           23 QAKRVAFV----------TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCER   92 (269)
T ss_dssp             -CCCEEEE----------TTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHH
T ss_pred             hcCCEEEE----------ECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            35678999          99999999999999999999999998 454443332    222322 222  3333221   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..+  ++|++|.++|
T Consensus        93 ~~~~~~~~~g--~id~li~nAg  112 (269)
T 3gk3_A           93 CAEKVLADFG--KVDVLINNAG  112 (269)
T ss_dssp             HHHHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHHHcC--CCCEEEECCC
Confidence             223333332  6999999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=94.79  E-value=0.04  Score=47.32  Aligned_cols=72  Identities=18%  Similarity=0.212  Sum_probs=48.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HH---HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FV---ARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~---~~~~~~  213 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++++++++     ...... ..|-.+.. +.   +.+.+.
T Consensus         7 ~~k~vlV----------TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            7 RDKVVIV----------TGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999          9999999999999999999999999987654     111111 12333322 11   222222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .  .++|++|+++|
T Consensus        72 ~--g~iD~lv~~Ag   83 (264)
T 2dtx_A           72 Y--GSISVLVNNAG   83 (264)
T ss_dssp             H--SCCCEEEECCC
T ss_pred             c--CCCCEEEECCC
Confidence            2  26999999987

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=94.78  E-value=0.059  Score=46.05  Aligned_cols=76  Identities=18%  Similarity=0.327  Sum_probs=49.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHHHH----cCCCE-E--EeCCCcc-H---H
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKD----LGADV-C--INYKTED-F---V  207 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~----~g~~~-~--~~~~~~~-~---~  207 (335)
                      +.++||          +|+++.+|.++++.+...|++|+++.++.+ ..+.+.+    .+... .  .|-.+.. +   .
T Consensus         7 ~k~vlV----------TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   76 (264)
T 3i4f_A            7 VRHALI----------TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIV   76 (264)
T ss_dssp             CCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHH
T ss_pred             cCEEEE----------eCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            468999          999999999999999999999999976543 3333332    22222 2  2333322 1   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+  ++|++|.++|
T Consensus        77 ~~~~~~~g--~id~lv~~Ag   94 (264)
T 3i4f_A           77 EEAMSHFG--KIDFLINNAG   94 (264)
T ss_dssp             HHHHHHHS--CCCEEECCCC
T ss_pred             HHHHHHhC--CCCEEEECCc
Confidence            22223332  6999999998

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=94.75  E-value=0.19  Score=44.07  Aligned_cols=91  Identities=15%  Similarity=0.084  Sum_probs=61.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCCC--EEEeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~  214 (335)
                      .+.+++|          +| +|.+|.+++..+...|+ +|++..|+.++.+.+. .++..  .+.+     + +.+.+..
T Consensus       140 ~~~~vlV----------lG-aGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-----~-~~~~~~~  202 (297)
T 2egg_A          140 DGKRILV----------IG-AGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-----L-AEAETRL  202 (297)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-----H-HHHHHTG
T ss_pred             CCCEEEE----------EC-cHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-----H-HHHHhhh
Confidence            5778999          88 69999999999999998 9999999988866554 45542  1221     1 2333333


Q ss_pred             CCCcccEEEeCCChhhHH------HhhccccCCCEEEEEe
Q 019790          215 GGKGVDVILDCMGASYFQ------RNLGSLNIDGRLFIIG  248 (335)
Q Consensus       215 ~~~~~d~vid~~g~~~~~------~~~~~l~~~G~~v~~g  248 (335)
                        ..+|+||+|++.....      .....++++..++.+.
T Consensus       203 --~~aDivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~  240 (297)
T 2egg_A          203 --AEYDIIINTTSVGMHPRVEVQPLSLERLRPGVIVSDII  240 (297)
T ss_dssp             --GGCSEEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECC
T ss_pred             --ccCCEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence              3689999999865321      1123456666666664

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=94.74  E-value=0.17  Score=43.25  Aligned_cols=102  Identities=13%  Similarity=0.026  Sum_probs=66.6

Q ss_pred             HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC---CEEEeCC
Q 019790          130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA---DVCINYK  202 (335)
Q Consensus       130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~---~~~~~~~  202 (335)
                      ++.....+.++.+||-          .|  ++.|..+..+++.-+++|++++.++...+.+++    .+.   -.++..+
T Consensus        37 ~l~~l~~~~~~~~vLD----------iG--cG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d  104 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIAD----------IG--CGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGS  104 (267)
T ss_dssp             HHTTCCCCCTTCEEEE----------ET--CTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred             HHHhcccCCCCCEEEE----------eC--CCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcC
Confidence            3433335788899988          77  346888889998866699999999988777754    332   1222222


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCC-----h-hhHHHhhccccCCCEEEEEec
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMG-----A-SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g-----~-~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      ...+.      .....||+|+-...     . ..+..+.+.|+|+|+++....
T Consensus       105 ~~~~~------~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          105 MDDLP------FRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             TTSCC------CCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             hhhCC------CCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            11110      12347999986432     2 235778899999999987643

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=94.72  E-value=0.14  Score=41.98  Aligned_cols=97  Identities=16%  Similarity=0.160  Sum_probs=65.9

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CE-EEeCCCccHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DV-CINYKTEDFVARVK  211 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~-~~~~~~~~~~~~~~  211 (335)
                      ...+.++.+||-          .|  ++.|..+..+++. |++|++++.++...+.+++.+. .. .+..+...+     
T Consensus        41 l~~~~~~~~vLd----------iG--~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-----  102 (218)
T 3ou2_A           41 LRAGNIRGDVLE----------LA--SGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-----  102 (218)
T ss_dssp             HTTTTSCSEEEE----------ES--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-----
T ss_pred             HhcCCCCCeEEE----------EC--CCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-----
Confidence            345778888888          77  3347777778777 8899999999999988887552 22 222221111     


Q ss_pred             HHhCCCcccEEEeCCC-----h----hhHHHhhccccCCCEEEEEecc
Q 019790          212 EETGGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                        .....||+|+....     .    ..+..+.+.|+++|+++.....
T Consensus       103 --~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          103 --TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             --CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             --CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence              23457999996442     2    2256778899999999877543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=94.72  E-value=0.056  Score=43.94  Aligned_cols=97  Identities=12%  Similarity=0.142  Sum_probs=61.2

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .++||          +|++|.+|..+++.+...|.+|++++|++++.......+. ..+..+-.+ .+.+.+...  ++|
T Consensus         4 ~~ilV----------tGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~--~~d   69 (206)
T 1hdo_A            4 KKIAI----------FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQ-AADVDKTVA--GQD   69 (206)
T ss_dssp             CEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTS-HHHHHHHHT--TCS
T ss_pred             CEEEE----------EcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EEEEecCCC-HHHHHHHHc--CCC
Confidence            57999          9999999999999999999999999998765432211122 222222222 234445443  589


Q ss_pred             EEEeCCChhh-----------HHHhhccccC--CCEEEEEeccC
Q 019790          221 VILDCMGASY-----------FQRNLGSLNI--DGRLFIIGTQG  251 (335)
Q Consensus       221 ~vid~~g~~~-----------~~~~~~~l~~--~G~~v~~g~~~  251 (335)
                      ++|.+++...           ....++.+..  .++++.++...
T Consensus        70 ~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           70 AVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             EEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             EEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence            9999987421           2233333332  35888876543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=94.71  E-value=0.17  Score=49.11  Aligned_cols=77  Identities=17%  Similarity=0.219  Sum_probs=52.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh---------hhHH----HHHHcCCCEEEeCCCcc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------EKLA----VCKDLGADVCINYKTED  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~---------~~~~----~~~~~g~~~~~~~~~~~  205 (335)
                      .+..+||          +|+++++|.+.++.+...|++|++.+++.         ++.+    .+++.|...+.|..+..
T Consensus         7 ~gkvalV----------TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~   76 (604)
T 2et6_A            7 KDKVVII----------TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVL   76 (604)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTT
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHH
Confidence            4678999          99999999999999999999999987643         2222    23334544455554432


Q ss_pred             ----HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 ----FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 ----~~~~~~~~~~~~~~d~vid~~g  227 (335)
                          +.+.+.+..  +++|++++++|
T Consensus        77 ~~~~~v~~~~~~~--G~iDiLVnNAG  100 (604)
T 2et6_A           77 DGDKIVETAVKNF--GTVHVIINNAG  100 (604)
T ss_dssp             CHHHHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHHHHHc--CCCCEEEECCC
Confidence                233333333  36999999987

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=94.71  E-value=0.18  Score=43.51  Aligned_cols=72  Identities=14%  Similarity=0.177  Sum_probs=51.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC--CEEEeCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~--~~~~~~~~~~~~~~~~~~~~  215 (335)
                      ++.+++|          +|+ |.+|.+++..+...|++|++..|+.++.+.+. +++.  ....  .+.   +.+   ..
T Consensus       118 ~~k~vlV----------iGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~--~~~---~~~---~~  178 (271)
T 1nyt_A          118 PGLRILL----------IGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSM---DEL---EG  178 (271)
T ss_dssp             TTCEEEE----------ECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCS---GGG---TT
T ss_pred             CCCEEEE----------ECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeE--ecH---HHh---cc
Confidence            5778999          885 89999999999999999999999988765554 4432  1111  111   111   11


Q ss_pred             CCcccEEEeCCChhh
Q 019790          216 GKGVDVILDCMGASY  230 (335)
Q Consensus       216 ~~~~d~vid~~g~~~  230 (335)
                       ..+|++++|++...
T Consensus       179 -~~~DivVn~t~~~~  192 (271)
T 1nyt_A          179 -HEFDLIINATSSGI  192 (271)
T ss_dssp             -CCCSEEEECCSCGG
T ss_pred             -CCCCEEEECCCCCC
Confidence             36999999998654

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=94.69  E-value=0.23  Score=42.81  Aligned_cols=83  Identities=14%  Similarity=0.103  Sum_probs=57.8

Q ss_pred             ccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCC-cccEEEeCCChhhH
Q 019790          156 HGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK-GVDVILDCMGASYF  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~  231 (335)
                      +| .|.+|.+.++.+...|.  +|++.++++++.+.+++.|.. .... +   ..    +..  . ..|+||.|+.....
T Consensus         7 IG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~-~---~~----~~~--~~~aDvVilavp~~~~   75 (281)
T 2g5c_A            7 VG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT-S---IA----KVE--DFSPDFVMLSSPVRTF   75 (281)
T ss_dssp             ES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES-C---GG----GGG--GTCCSEEEECSCHHHH
T ss_pred             Ee-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC-C---HH----HHh--cCCCCEEEEcCCHHHH
Confidence            77 89999999999998898  999999999988888877763 1221 1   11    111  2 58999999997654


Q ss_pred             HH----hhccccCCCEEEEEec
Q 019790          232 QR----NLGSLNIDGRLFIIGT  249 (335)
Q Consensus       232 ~~----~~~~l~~~G~~v~~g~  249 (335)
                      ..    ....++++..++.++.
T Consensus        76 ~~v~~~l~~~l~~~~iv~~~~~   97 (281)
T 2g5c_A           76 REIAKKLSYILSEDATVTDQGS   97 (281)
T ss_dssp             HHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHHhhCCCCcEEEECCC
Confidence            33    3345666665555543

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=94.65  E-value=0.083  Score=45.21  Aligned_cols=77  Identities=21%  Similarity=0.267  Sum_probs=50.3

Q ss_pred             CCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhh-----HHHHH-HcCCCEEE---eCCCcc-H
Q 019790          139 PGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEK-----LAVCK-DLGADVCI---NYKTED-F  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~-----~~~~~-~~g~~~~~---~~~~~~-~  206 (335)
                      .+.++||          +|++  +.+|.++++.+...|++|+++.++..+     .+.+. ..+....+   |-.+.. +
T Consensus        19 ~~k~vlI----------TGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   88 (267)
T 3gdg_A           19 KGKVVVV----------TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESC   88 (267)
T ss_dssp             TTCEEEE----------TTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHH
T ss_pred             CCCEEEE----------ECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHH
Confidence            4678999          9998  899999999999999999999876432     22222 23433322   323322 1


Q ss_pred             ---HHHHHHHhCCCcccEEEeCCC
Q 019790          207 ---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ---~~~~~~~~~~~~~d~vid~~g  227 (335)
                         .+.+.+..  .++|++|+++|
T Consensus        89 ~~~~~~~~~~~--g~id~li~nAg  110 (267)
T 3gdg_A           89 EKLVKDVVADF--GQIDAFIANAG  110 (267)
T ss_dssp             HHHHHHHHHHT--SCCSEEEECCC
T ss_pred             HHHHHHHHHHc--CCCCEEEECCC
Confidence               22333333  36899999987

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=94.65  E-value=0.033  Score=47.84  Aligned_cols=71  Identities=20%  Similarity=0.219  Sum_probs=49.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      +.++||          +|++|.+|..+++.+...|++|+++++++.+..     +... .+..+-.+ .+.+.+...  +
T Consensus         3 ~k~vlV----------TGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d-~~~~~~~~~--~   64 (267)
T 3rft_A            3 MKRLLV----------TGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----GPNEECVQCDLAD-ANAVNAMVA--G   64 (267)
T ss_dssp             EEEEEE----------ESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----CTTEEEEECCTTC-HHHHHHHHT--T
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----CCCCEEEEcCCCC-HHHHHHHHc--C
Confidence            357899          999999999999999999999999998865433     2221 22222122 234444443  6


Q ss_pred             ccEEEeCCCh
Q 019790          219 VDVILDCMGA  228 (335)
Q Consensus       219 ~d~vid~~g~  228 (335)
                      +|++|.++|.
T Consensus        65 ~D~vi~~Ag~   74 (267)
T 3rft_A           65 CDGIVHLGGI   74 (267)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            8999999873

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.62  E-value=0.03  Score=48.02  Aligned_cols=74  Identities=20%  Similarity=0.229  Sum_probs=49.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCccH----HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDF----VARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~----~~~~~~~  213 (335)
                      .+.++||          +||++.+|.+++..+...|++|++++++.+.....   .... ..|-.+...    .+.+.+.
T Consensus        27 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           27 QQKVVVI----------TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             TCCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999          99999999999999999999999999876543211   1111 123333221    2222233


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .+  ++|++++++|
T Consensus        94 ~g--~iD~lv~nAg  105 (260)
T 3un1_A           94 FG--RIDSLVNNAG  105 (260)
T ss_dssp             HS--CCCEEEECCC
T ss_pred             CC--CCCEEEECCC
Confidence            32  6999999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=94.61  E-value=0.5  Score=38.98  Aligned_cols=87  Identities=10%  Similarity=-0.044  Sum_probs=58.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR-  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~-  233 (335)
                      .| .|.+|..+++.+...|.+|+++++++++.+.+.+ .+.. ++..+..+ .+.+.+. +-..+|+++-+++.+.... 
T Consensus         6 iG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~-~~~l~~a-~i~~ad~vi~~~~~d~~n~~   81 (218)
T 3l4b_C            6 IG-GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDGSH-KEILRDA-EVSKNDVVVILTPRDEVNLF   81 (218)
T ss_dssp             EC-CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCTTS-HHHHHHH-TCCTTCEEEECCSCHHHHHH
T ss_pred             EC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCCCC-HHHHHhc-CcccCCEEEEecCCcHHHHH
Confidence            77 6999999999999999999999999998887654 5554 33333332 2233332 3357999999999865322 


Q ss_pred             ---hhccccCCCEEEE
Q 019790          234 ---NLGSLNIDGRLFI  246 (335)
Q Consensus       234 ---~~~~l~~~G~~v~  246 (335)
                         ..+.+.+..+++.
T Consensus        82 ~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           82 IAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             HHHHHHHTSCCCEEEE
T ss_pred             HHHHHHHHcCCCeEEE
Confidence               2233344455554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=94.59  E-value=0.081  Score=51.40  Aligned_cols=79  Identities=22%  Similarity=0.276  Sum_probs=47.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---------ChhhHH----HHHHcCCCEEEeCCCcc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---------SEEKLA----VCKDLGADVCINYKTED  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---------~~~~~~----~~~~~g~~~~~~~~~~~  205 (335)
                      .|.++||          +||++++|.+++..+...|++|+++++         +.++.+    .+++.+...+.|..+..
T Consensus        18 ~gk~~lV----------TGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~   87 (613)
T 3oml_A           18 DGRVAVV----------TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVI   87 (613)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGG
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHH
Confidence            5778999          999999999999999999999999876         433332    33445656666665543


Q ss_pred             HHHHHHHHh-C-CCcccEEEeCCC
Q 019790          206 FVARVKEET-G-GKGVDVILDCMG  227 (335)
Q Consensus       206 ~~~~~~~~~-~-~~~~d~vid~~g  227 (335)
                      -.+.+.+.. . ..++|++|+++|
T Consensus        88 ~~~~~~~~~~~~~g~iDiLVnnAG  111 (613)
T 3oml_A           88 DGAKVIETAIKAFGRVDILVNNAG  111 (613)
T ss_dssp             GHHHHHC----------CEECCCC
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCC
Confidence            222222211 1 136899999987

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=94.59  E-value=0.14  Score=44.49  Aligned_cols=96  Identities=17%  Similarity=0.061  Sum_probs=65.1

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--C-EEEeCCCccHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCINYKTEDFVA  208 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~-~~~~~~~~~~~~  208 (335)
                      .+.++.+||-          .|  ++.|..+..+++..|++|++++.++...+.+++    .+.  . .+...+....  
T Consensus        79 ~~~~~~~vLD----------iG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--  144 (297)
T 2o57_A           79 VLQRQAKGLD----------LG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI--  144 (297)
T ss_dssp             CCCTTCEEEE----------ET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC--
T ss_pred             CCCCCCEEEE----------eC--CCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC--
Confidence            7788999998          77  347888888888889999999999988777653    232  1 2222221111  


Q ss_pred             HHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEec
Q 019790          209 RVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~  249 (335)
                          -.....||+|+..-.-       ..+..+.+.|+|+|+++....
T Consensus       145 ----~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          145 ----PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             ----SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ----CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence                0123469999864332       236778899999999987643

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=94.57  E-value=0.34  Score=42.33  Aligned_cols=81  Identities=14%  Similarity=0.029  Sum_probs=55.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~  234 (335)
                      +| .|.+|...+..+...|.+|++.++++++.+.+.+.|.........+.        .  ...|+||-|+... .....
T Consensus        13 IG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~--------~--~~aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A           13 VG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREF--------A--GVVDALVILVVNAAQVRQV   81 (303)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTT--------T--TTCSEEEECCSSHHHHHHH
T ss_pred             EC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHH--------H--hcCCEEEEECCCHHHHHHH
Confidence            77 89999999999989999999999999999988887765422211111        1  2468888888864 34333


Q ss_pred             h-------ccccCCCEEEEE
Q 019790          235 L-------GSLNIDGRLFII  247 (335)
Q Consensus       235 ~-------~~l~~~G~~v~~  247 (335)
                      +       ..++++..++..
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~  101 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVS  101 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEEC
T ss_pred             HhChhhHHhhCCCCCEEEec
Confidence            2       334455545544

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.55  E-value=0.17  Score=42.82  Aligned_cols=100  Identities=11%  Similarity=0.090  Sum_probs=66.9

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC---EEEeCCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKT  203 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~  203 (335)
                      +.....+.++.+||-          .|  ++.|..+..+++..+.+|++++.++...+.+++    .+..   .++..+.
T Consensus        38 l~~l~~~~~~~~vLD----------iG--~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~  105 (257)
T 3f4k_A           38 VSFINELTDDAKIAD----------IG--CGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM  105 (257)
T ss_dssp             HTTSCCCCTTCEEEE----------ET--CTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred             HHHHhcCCCCCeEEE----------eC--CCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence            434446788889988          77  345888999999987899999999988877653    3321   2222222


Q ss_pred             ccHHHHHHHHhCCCcccEEEeC-----CCh-hhHHHhhccccCCCEEEEEe
Q 019790          204 EDFVARVKEETGGKGVDVILDC-----MGA-SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~-----~g~-~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ..+.      .....||+|+-.     .+. ..+..+.+.|+|+|+++...
T Consensus       106 ~~~~------~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          106 DNLP------FQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             TSCS------SCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             hhCC------CCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            1111      123479999753     222 23677889999999998775

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.53  E-value=0.12  Score=49.12  Aligned_cols=82  Identities=15%  Similarity=0.161  Sum_probs=51.6

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEE-ecCh-------------h----hHHHHHHcCCC
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVT-AGSE-------------E----KLAVCKDLGAD  196 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~-~~~~-------------~----~~~~~~~~g~~  196 (335)
                      .+.++.++||          +||+|++|..+++.+-..|++ ++.+ .++.             +    ..+.+++.|..
T Consensus       247 ~~~~~~~vLI----------TGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~  316 (525)
T 3qp9_A          247 WWQADGTVLV----------TGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGAT  316 (525)
T ss_dssp             SSCTTSEEEE----------SSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCE
T ss_pred             eecCCCEEEE----------ECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCE
Confidence            3567889999          999999999999888888996 6666 6662             1    22334455654


Q ss_pred             EEE---eCCCcc-HHHHHHHHhCCCcccEEEeCCC
Q 019790          197 VCI---NYKTED-FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       197 ~~~---~~~~~~-~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      ..+   |-.+.. ....+.+.....++|.+|.++|
T Consensus       317 v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AG  351 (525)
T 3qp9_A          317 ATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPP  351 (525)
T ss_dssp             EEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             EEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence            322   222322 2222222222347899999987

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=94.53  E-value=0.2  Score=43.18  Aligned_cols=96  Identities=11%  Similarity=0.128  Sum_probs=63.1

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCE
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADV  197 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~  197 (335)
                      +||....+...+.+...--.|.+++|          .|++..+|..+++++...  |++|++..+..             
T Consensus       138 ~PcTp~gi~~ll~~~~i~l~gk~vvV----------vG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------  194 (281)
T 2c2x_A          138 LPCTPRGIVHLLRRYDISIAGAHVVV----------IGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------  194 (281)
T ss_dssp             CCHHHHHHHHHHHHTTCCCTTCEEEE----------ECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------
T ss_pred             CCChHHHHHHHHHHcCCCCCCCEEEE----------ECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------
Confidence            44444444444534332346778888          886556899999999999  89998875332             


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                            .+    +.+.+  +.+|++|.++|...+ ---+.++++-.++.+|...
T Consensus       195 ------~~----L~~~~--~~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          195 ------RD----LPALT--RQADIVVAAVGVAHL-LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             ------SC----HHHHH--TTCSEEEECSCCTTC-BCGGGSCTTCEEEECCEEE
T ss_pred             ------hH----HHHHH--hhCCEEEECCCCCcc-cCHHHcCCCcEEEEccCCC
Confidence                  22    23333  258999999998754 2234578887788887654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=94.52  E-value=0.03  Score=46.97  Aligned_cols=100  Identities=15%  Similarity=0.085  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcC---CCE-EEeCCCccHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---ADV-CINYKTEDFV  207 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g---~~~-~~~~~~~~~~  207 (335)
                      ....+.++++||-          .| +|. |..+..+++..| .+|++++.+++..+.+++..   ... .+..+.....
T Consensus        68 ~~~~~~~~~~VLD----------lG-cG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~  135 (230)
T 1fbn_A           68 KVMPIKRDSKILY----------LG-ASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ  135 (230)
T ss_dssp             CCCCCCTTCEEEE----------ES-CCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG
T ss_pred             cccCCCCCCEEEE----------Ec-ccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcc
Confidence            3345678888888          77 444 888888888876 69999999998887776422   122 1222221110


Q ss_pred             HHHHHHhCCCcccEEEeCCChh----h-HHHhhccccCCCEEEEE
Q 019790          208 ARVKEETGGKGVDVILDCMGAS----Y-FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~----~-~~~~~~~l~~~G~~v~~  247 (335)
                      . . .... ..||+|+......    . +..+.+.|+++|+++..
T Consensus       136 ~-~-~~~~-~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          136 E-Y-ANIV-EKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             G-G-TTTS-CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             c-c-cccC-ccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            0 0 0112 4699999655432    2 56778899999999875

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=94.52  E-value=0.1  Score=46.55  Aligned_cols=87  Identities=13%  Similarity=0.050  Sum_probs=64.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|...++.++..|++|++.+++... +.+.+.|...      .++    .+..  ..
T Consensus       164 ~g~tvgI----------IG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~------~~l----~ell--~~  219 (335)
T 2g76_A          164 NGKTLGI----------LG-LGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ------LPL----EEIW--PL  219 (335)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE------CCH----HHHG--GG
T ss_pred             CcCEEEE----------Ee-ECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee------CCH----HHHH--hc
Confidence            5678888          77 8999999999999999999999987655 3555677632      122    2222  25


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+.|++...     + ...+..|++++.++.++.
T Consensus       220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~ar  256 (335)
T 2g76_A          220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCAR  256 (335)
T ss_dssp             CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred             CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            799999987632     1 456788999998888875

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=94.51  E-value=0.085  Score=43.96  Aligned_cols=98  Identities=15%  Similarity=0.085  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC---C-EEEeCCCccHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---D-VCINYKTEDFVA  208 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~---~-~~~~~~~~~~~~  208 (335)
                      ....+.++.+||-          .| +| .|..+..+++. +.+|++++.+++..+.+++...   . .++..+...   
T Consensus        64 ~~~~~~~~~~vLd----------iG-~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~---  127 (231)
T 1vbf_A           64 DELDLHKGQKVLE----------IG-TG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTL---  127 (231)
T ss_dssp             HHTTCCTTCEEEE----------EC-CT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGG---
T ss_pred             HhcCCCCCCEEEE----------Ec-CC-CCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccc---
Confidence            4557788999998          77 44 38888888877 4899999999998888875321   2 222222111   


Q ss_pred             HHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEec
Q 019790          209 RVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~  249 (335)
                      .   ......||+|+....-.. ...+.+.|+++|+++..-.
T Consensus       128 ~---~~~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          128 G---YEEEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             C---CGGGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             c---cccCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            0   111247999997665433 3567889999999987643

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=94.51  E-value=0.018  Score=48.86  Aligned_cols=35  Identities=20%  Similarity=0.265  Sum_probs=31.2

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      ++||          +|++|.+|..++..+...|++|+++++++++
T Consensus         3 ~vlV----------tGasg~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (255)
T 2dkn_A            3 VIAI----------TGSASGIGAALKELLARAGHTVIGIDRGQAD   37 (255)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             EEEE----------eCCCcHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            5888          9999999999999988899999999987653

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=94.48  E-value=0.22  Score=42.53  Aligned_cols=100  Identities=17%  Similarity=0.189  Sum_probs=66.8

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--C-EEEeCCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCINYKT  203 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~-~~~~~~~  203 (335)
                      +.....+.++.+||-          .|  ++.|..+..+++..+++|++++.+++..+.+++    .+.  . .+...+.
T Consensus        53 l~~~~~~~~~~~vLD----------iG--cG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~  120 (273)
T 3bus_A           53 MIALLDVRSGDRVLD----------VG--CGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADA  120 (273)
T ss_dssp             HHHHSCCCTTCEEEE----------ES--CTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred             HHHhcCCCCCCEEEE----------eC--CCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcc
Confidence            345667789999998          77  345888888988889999999999988777654    232  1 2222221


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCC-----Ch--hhHHHhhccccCCCEEEEEe
Q 019790          204 EDFVARVKEETGGKGVDVILDCM-----GA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~-----g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ....      .....||+|+-.-     ..  ..+..+.+.|+++|+++...
T Consensus       121 ~~~~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          121 MDLP------FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             TSCC------SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             ccCC------CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            1110      1224799998532     22  23577889999999998664

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=94.48  E-value=0.27  Score=42.27  Aligned_cols=81  Identities=9%  Similarity=0.004  Sum_probs=56.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                      +| .|.+|.+.+..+...|.+|++.++++++.+.+.+.|.. .... +       +.+.   ...|+||-|+........
T Consensus         6 iG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~-~-------~~~~---~~~D~vi~av~~~~~~~~   73 (279)
T 2f1k_A            6 VG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ-D-------LSLL---QTAKIIFLCTPIQLILPT   73 (279)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES-C-------GGGG---TTCSEEEECSCHHHHHHH
T ss_pred             Ec-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccC-C-------HHHh---CCCCEEEEECCHHHHHHH
Confidence            77 89999999999988899999999999988888777753 2221 1       1111   258999999998654333


Q ss_pred             ----hccccCCCEEEEEe
Q 019790          235 ----LGSLNIDGRLFIIG  248 (335)
Q Consensus       235 ----~~~l~~~G~~v~~g  248 (335)
                          ...++++..++.++
T Consensus        74 ~~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           74 LEKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HHHHGGGSCTTCEEEECC
T ss_pred             HHHHHhhCCCCCEEEECC
Confidence                34455555555553

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=94.47  E-value=0.15  Score=43.32  Aligned_cols=97  Identities=16%  Similarity=0.213  Sum_probs=63.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCC--EEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD--VCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~--~~~~~~~~~~  206 (335)
                      ......++.+||-          .| +| .|..+..+++. +.+|++++.+++..+.+++.    +..  .....+...+
T Consensus        31 ~~l~~~~~~~vLD----------iG-cG-~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l   97 (260)
T 1vl5_A           31 QIAALKGNEEVLD----------VA-TG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM   97 (260)
T ss_dssp             HHHTCCSCCEEEE----------ET-CT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC
T ss_pred             HHhCCCCCCEEEE----------Ee-CC-CCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC
Confidence            4456678889998          77 33 67777788776 45999999999888777642    321  1222221111


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEe
Q 019790          207 VARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .      .....||+|+.+..-       ..+..+.+.|+|+|+++...
T Consensus        98 ~------~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A           98 P------FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             C------SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             C------CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            0      123479999976442       33577889999999998764

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=94.47  E-value=0.16  Score=43.41  Aligned_cols=77  Identities=16%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCcc-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTED-F---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~-~---  206 (335)
                      .+.++||          +||++.+|.++++.+...|++|+++. ++.++.+..    .+.+... .+  |-.+.. +   
T Consensus        25 ~~k~vlV----------TGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~   94 (267)
T 4iiu_A           25 MSRSVLV----------TGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREV   94 (267)
T ss_dssp             CCCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            3578999          99999999999999999999997755 555444332    2333332 22  333322 1   


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  .++|++|+++|
T Consensus        95 ~~~~~~~~--g~id~li~nAg  113 (267)
T 4iiu_A           95 LEHEIAQH--GAWYGVVSNAG  113 (267)
T ss_dssp             HHHHHHHH--CCCSEEEECCC
T ss_pred             HHHHHHHh--CCccEEEECCC
Confidence            22222222  26899999987

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=94.47  E-value=0.09  Score=44.35  Aligned_cols=99  Identities=12%  Similarity=0.069  Sum_probs=62.7

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~  210 (335)
                      ..+..+||-          .|  ++.|..+..+++.+  +.+|+.++.+++..+.+++    .|....+.....+..+.+
T Consensus        68 ~~~~~~VLe----------iG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l  135 (237)
T 3c3y_A           68 LVNAKKTIE----------VG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLAL  135 (237)
T ss_dssp             HTTCCEEEE----------EC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred             hhCCCEEEE----------eC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH
Confidence            356678888          77  45688888888886  5799999999988777753    343210111112233333


Q ss_pred             HHHh----CCCcccEEEeCCChh----hHHHhhccccCCCEEEEE
Q 019790          211 KEET----GGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~----~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      ....    ....||+||-.....    .+..+.+.|+++|.++.-
T Consensus       136 ~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d  180 (237)
T 3c3y_A          136 DNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYD  180 (237)
T ss_dssp             HHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEe
Confidence            3221    124799998654432    356778999999988764

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=94.47  E-value=0.075  Score=44.83  Aligned_cols=100  Identities=15%  Similarity=0.079  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcC----CCEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLG----ADVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~  206 (335)
                      ....++||++||=          .|  .+.|..+..+|+..|.  +|++++.+++..+.+++.-    .-..+..+....
T Consensus        71 ~~l~ikpG~~Vld----------lG--~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p  138 (233)
T 4df3_A           71 IELPVKEGDRILY----------LG--IASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP  138 (233)
T ss_dssp             SCCCCCTTCEEEE----------ET--CTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG
T ss_pred             hhcCCCCCCEEEE----------ec--CcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc
Confidence            4467899999999          77  5568899999998875  7999999999888776432    111122222111


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-----hhHHHhhccccCCCEEEEE
Q 019790          207 VARVKEETGGKGVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  247 (335)
                       .... . ....+|+||-....     ..+..+.+.|+++|+++..
T Consensus       139 -~~~~-~-~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          139 -EKYR-H-LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             -GGGT-T-TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cccc-c-ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence             0111 1 12368988864442     1246678899999999764

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=94.44  E-value=0.12  Score=40.53  Aligned_cols=98  Identities=14%  Similarity=0.130  Sum_probs=61.0

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHcCCCEEEeCCCcc--HHHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVCINYKTED--FVARV  210 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~  210 (335)
                      ..+.++.+||-          .| +|. |..+..+++..  +.++++++.++ ..+.    ..-..+..+...  ..+.+
T Consensus        18 ~~~~~~~~vLd----------~G-~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~   80 (180)
T 1ej0_A           18 KLFKPGMTVVD----------LG-AAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKAL   80 (180)
T ss_dssp             CCCCTTCEEEE----------ES-CTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHH
T ss_pred             CCCCCCCeEEE----------eC-CCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhh
Confidence            34678889988          77 444 88888888886  47999999876 3321    111222222222  22233


Q ss_pred             HHHhCCCcccEEEeCC-----Ch-------------hhHHHhhccccCCCEEEEEec
Q 019790          211 KEETGGKGVDVILDCM-----GA-------------SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~-----g~-------------~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      ........||+|+...     +.             ..+..+.+.|+++|+++....
T Consensus        81 ~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           81 LERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            3334455799999732     22             235667888999999987643

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.43  E-value=0.14  Score=48.15  Aligned_cols=81  Identities=16%  Similarity=0.264  Sum_probs=52.6

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhh-------HHHHHHcCCCEE-E--eCCCcc
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-------LAVCKDLGADVC-I--NYKTED  205 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~-------~~~~~~~g~~~~-~--~~~~~~  205 (335)
                      +.++.++||          +||+|.+|..++..+...|+ +|+++.|+...       .+.++..|.... +  |-.+..
T Consensus       223 ~~~~~~vLI----------TGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~  292 (486)
T 2fr1_A          223 WKPTGTVLV----------TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE  292 (486)
T ss_dssp             CCCCSEEEE----------ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH
T ss_pred             cCCCCEEEE----------ECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHH
Confidence            467889999          99999999999988888899 59999987641       123444564332 2  222322


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 -FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g  227 (335)
                       +...+.+.....++|.||.++|
T Consensus       293 ~v~~~~~~i~~~g~ld~VIh~AG  315 (486)
T 2fr1_A          293 SVRELLGGIGDDVPLSAVFHAAA  315 (486)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCc
Confidence             2222222212246899999987

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=94.43  E-value=0.15  Score=44.50  Aligned_cols=74  Identities=23%  Similarity=0.360  Sum_probs=50.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-----hhhHHHHH---HcCCCEEEeCCCccHHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-----EEKLAVCK---DLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-----~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      .+|||          +|++|.+|..+++.+...|.+|++++|+     +++.+.++   ..+.. ++..+-.+ .+.+.+
T Consensus         5 ~~ilV----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d-~~~l~~   72 (313)
T 1qyd_A            5 SRVLI----------VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDD-HQRLVD   72 (313)
T ss_dssp             CCEEE----------ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSC-HHHHHH
T ss_pred             CEEEE----------EcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCC-HHHHHH
Confidence            56899          9999999999999999899999999987     34443333   23432 23222122 234555


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ...  ++|+||.+++.
T Consensus        73 ~~~--~~d~vi~~a~~   86 (313)
T 1qyd_A           73 ALK--QVDVVISALAG   86 (313)
T ss_dssp             HHT--TCSEEEECCCC
T ss_pred             HHh--CCCEEEECCcc
Confidence            543  59999998874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=94.40  E-value=0.17  Score=47.65  Aligned_cols=78  Identities=24%  Similarity=0.324  Sum_probs=50.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChh-------hHHHHHHcCCCEEE---eCCCcc-HHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE-------KLAVCKDLGADVCI---NYKTED-FVA  208 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~-------~~~~~~~~g~~~~~---~~~~~~-~~~  208 (335)
                      .++||          +||+|++|..+++.+...|+ +|+.+.++..       ..+.+++.|....+   |-.+.. +.+
T Consensus       240 ~~vLI----------TGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~  309 (496)
T 3mje_A          240 GSVLV----------TGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAA  309 (496)
T ss_dssp             SEEEE----------ETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             CEEEE----------ECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            78999          99999999999998888899 7888887632       22334456654332   222322 222


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.....++|.+|.++|.
T Consensus       310 ~~~~i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          310 LLAELPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             HHHTCCTTSCEEEEEECCCC
T ss_pred             HHHHHHHhCCCeEEEECCcc
Confidence            22222222479999998873

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=94.40  E-value=0.13  Score=43.07  Aligned_cols=95  Identities=14%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHh
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET  214 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  214 (335)
                      ..+.++.+||-          .|  ++.|..+..+++. |++|++++.+++..+.+++. . ..+.   .+..+.+. ..
T Consensus        37 ~~~~~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~-~-~~~~---~d~~~~~~-~~   97 (240)
T 3dli_A           37 PYFKGCRRVLD----------IG--CGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK-F-NVVK---SDAIEYLK-SL   97 (240)
T ss_dssp             GGTTTCSCEEE----------ET--CTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT-S-EEEC---SCHHHHHH-TS
T ss_pred             hhhcCCCeEEE----------Ee--CCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh-c-ceee---ccHHHHhh-hc
Confidence            34577888888          76  3456666666665 88999999999988888766 2 2222   22222221 22


Q ss_pred             CCCcccEEEeC-----CCh----hhHHHhhccccCCCEEEEEe
Q 019790          215 GGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       215 ~~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ..+.||+|+-.     ++.    ..+..+.+.|+++|+++...
T Consensus        98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  140 (240)
T 3dli_A           98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES  140 (240)
T ss_dssp             CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred             CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            34579999863     232    23567889999999998654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=94.38  E-value=0.048  Score=46.56  Aligned_cols=72  Identities=24%  Similarity=0.285  Sum_probs=49.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCcc-HH---HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTED-FV---ARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~---~~~~~  212 (335)
                      .+.++||          +|+++.+|.++++.+...|++|+++.+++++.+.      -..+  |-.+.+ +.   +.+.+
T Consensus        20 ~~k~vlV----------TGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~   83 (253)
T 2nm0_A           20 MSRSVLV----------TGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEE   83 (253)
T ss_dssp             CCCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHH
Confidence            3678999          9999999999999999999999999987654322      1222  333322 21   22222


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ..  .++|++|+++|.
T Consensus        84 ~~--g~iD~lv~nAg~   97 (253)
T 2nm0_A           84 TH--GPVEVLIANAGV   97 (253)
T ss_dssp             HT--CSCSEEEEECSC
T ss_pred             Hc--CCCCEEEECCCC
Confidence            22  368999998873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=94.38  E-value=0.43  Score=42.11  Aligned_cols=75  Identities=11%  Similarity=0.164  Sum_probs=50.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecC---hhhHHHHH-H----cCCC-EEEeCCCccHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS---EEKLAVCK-D----LGAD-VCINYKTEDFV  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~---~~~~~~~~-~----~g~~-~~~~~~~~~~~  207 (335)
                      -.+.++||          +| +|++|.+++..+...|+ +|+++.|+   .++.+.+. +    .+.. ...+..+.   
T Consensus       152 l~gk~~lV----------lG-aGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~---  217 (315)
T 3tnl_A          152 IIGKKMTI----------CG-AGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDH---  217 (315)
T ss_dssp             CTTSEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH---
T ss_pred             ccCCEEEE----------EC-CChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchH---
Confidence            35788999          88 59999999999999999 89999999   66655443 2    2221 23333321   


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  ..+|+||+|++.
T Consensus       218 ~~l~~~l--~~aDiIINaTp~  236 (315)
T 3tnl_A          218 EQLRKEI--AESVIFTNATGV  236 (315)
T ss_dssp             HHHHHHH--HTCSEEEECSST
T ss_pred             HHHHhhh--cCCCEEEECccC
Confidence            1222222  258999999874

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.38  E-value=0.035  Score=49.76  Aligned_cols=75  Identities=9%  Similarity=0.073  Sum_probs=48.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc--C-CCEEE--eCCCccHHHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--G-ADVCI--NYKTEDFVARVKEE  213 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~--g-~~~~~--~~~~~~~~~~~~~~  213 (335)
                      +.+|||          +||+|.+|..+++.+...|++|++++++..+...+. .+  + .-..+  |..+..   .+.+.
T Consensus         9 ~~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~   75 (357)
T 1rkx_A            9 GKRVFV----------TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN---KLLES   75 (357)
T ss_dssp             TCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHH---HHHHH
T ss_pred             CCEEEE----------ECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHH---HHHHH
Confidence            568999          999999999999999999999999998765432222 11  1 11222  323322   22222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      ..+.++|+||.+++
T Consensus        76 ~~~~~~d~vih~A~   89 (357)
T 1rkx_A           76 IREFQPEIVFHMAA   89 (357)
T ss_dssp             HHHHCCSEEEECCS
T ss_pred             HHhcCCCEEEECCC
Confidence            22115899999987

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=94.35  E-value=0.097  Score=43.56  Aligned_cols=97  Identities=19%  Similarity=0.175  Sum_probs=62.4

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC-CEEEeCCCccHHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVAR  209 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~  209 (335)
                      ..++++.+||-          .| +|..|..+..+++..+.+|++++.+++..+.+++    .+. -.++..+...+   
T Consensus        51 ~~~~~~~~vLD----------lG-~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~---  116 (230)
T 3evz_A           51 TFLRGGEVALE----------IG-TGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII---  116 (230)
T ss_dssp             TTCCSSCEEEE----------EC-CTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS---
T ss_pred             hhcCCCCEEEE----------cC-CCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh---
Confidence            44678888888          76 4436777777777668899999999988877753    332 22333221111   


Q ss_pred             HHHHhCCCcccEEEeCCC--------------------------hhhHHHhhccccCCCEEEEE
Q 019790          210 VKEETGGKGVDVILDCMG--------------------------ASYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g--------------------------~~~~~~~~~~l~~~G~~v~~  247 (335)
                       ... ....||+|+-...                          ...+..+.+.|+++|+++.+
T Consensus       117 -~~~-~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          117 -KGV-VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             -TTT-CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             -hhc-ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence             011 1247999995421                          22356778889999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=94.27  E-value=0.12  Score=47.48  Aligned_cols=84  Identities=19%  Similarity=0.165  Sum_probs=54.5

Q ss_pred             hcCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhh-CCCeEEEEecChhh----------------HHHHHHcCC
Q 019790          134 TSHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEK----------------LAVCKDLGA  195 (335)
Q Consensus       134 ~~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~~V~~~~~~~~~----------------~~~~~~~g~  195 (335)
                      ...+ ..+.++||          +||++++|.+++..+-. .|++|+++.++.+.                .+.+++.|.
T Consensus        54 ~~~~~~~gKvaLV----------TGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~  123 (422)
T 3s8m_A           54 RGVRNDGPKKVLV----------IGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGL  123 (422)
T ss_dssp             TCCCSSSCSEEEE----------ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred             ccccccCCCEEEE----------ECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCC
Confidence            3455 35678899          99999999998888877 89999999875432                134455664


Q ss_pred             CEE-E--eCCCcc----HHHHHHHHhCCCcccEEEeCCCh
Q 019790          196 DVC-I--NYKTED----FVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       196 ~~~-~--~~~~~~----~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      ... +  |-.+..    ..+.+.+..+ +++|++++++|.
T Consensus       124 ~a~~i~~Dvtd~~~v~~~v~~i~~~~~-G~IDiLVNNAG~  162 (422)
T 3s8m_A          124 YSKSINGDAFSDAARAQVIELIKTEMG-GQVDLVVYSLAS  162 (422)
T ss_dssp             CEEEEESCTTSHHHHHHHHHHHHHHSC-SCEEEEEECCCC
T ss_pred             cEEEEEecCCCHHHHHHHHHHHHHHcC-CCCCEEEEcCcc
Confidence            432 2  222222    2233334432 369999999875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=94.27  E-value=0.094  Score=47.10  Aligned_cols=36  Identities=14%  Similarity=0.147  Sum_probs=29.5

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      .++||          +||+|.+|..+++.+...|++|++++++...
T Consensus         2 ~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   37 (372)
T 1db3_A            2 KVALI----------TGVTGQDGSYLAEFLLEKGYEVHGIKRRASS   37 (372)
T ss_dssp             CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred             CEEEE----------ECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence            46899          9999999999999998899999999987643

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=94.21  E-value=0.1  Score=44.94  Aligned_cols=98  Identities=16%  Similarity=0.126  Sum_probs=66.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHHc-----CCC-EEEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL-----GAD-VCINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~~-----g~~-~~~~~~~~  204 (335)
                      ....+.++++||-          .|  ++.|..+..+++..  +.+|++++.+++..+.+++.     |.+ ..+...  
T Consensus       104 ~~~~~~~~~~VLD----------~G--~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~--  169 (275)
T 1yb2_A          104 MRCGLRPGMDILE----------VG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS--  169 (275)
T ss_dssp             --CCCCTTCEEEE----------EC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS--
T ss_pred             HHcCCCCcCEEEE----------ec--CCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC--
Confidence            4567788999988          76  33677788888874  67999999999888777642     422 222111  


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          205 DFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ++.+    ......||+|+-....  ..+..+.+.|+++|+++...
T Consensus       170 d~~~----~~~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          170 DIAD----FISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             CTTT----CCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             chhc----cCcCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            1111    1223469999986654  34688899999999998775

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=94.20  E-value=0.18  Score=42.70  Aligned_cols=105  Identities=24%  Similarity=0.366  Sum_probs=63.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE-ecChhhHHHH----HHcCCCE-EE--eCCCccH---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGADV-CI--NYKTEDF---  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~-~~~~~~~~~~----~~~g~~~-~~--~~~~~~~---  206 (335)
                      -.+.++||          +|+++.+|.++++.+...|++|+++ .++.++.+..    ++.+... .+  |-.+..-   
T Consensus         5 l~~k~vlI----------TGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   74 (255)
T 3icc_A            5 LKGKVALV----------TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEA   74 (255)
T ss_dssp             TTTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHH
T ss_pred             cCCCEEEE----------ECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHH
Confidence            35678999          9999999999999999999999886 4554443332    2333322 22  2222211   


Q ss_pred             -HHHHHHH----hCCCcccEEEeCCChh-----------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          207 -VARVKEE----TGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 -~~~~~~~----~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                       .+.+.+.    .+..++|++++++|..           .+               +.+++.++++|+++.++....
T Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~  151 (255)
T 3icc_A           75 LYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  151 (255)
T ss_dssp             HHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred             HHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence             1122221    1223599999988731           01               233445566789999876543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.20  E-value=0.081  Score=47.19  Aligned_cols=92  Identities=15%  Similarity=0.220  Sum_probs=58.8

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh----hhHHHH---HHcCCCEE-EeCCCccHHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----EKLAVC---KDLGADVC-INYKTEDFVARVKE  212 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~----~~~~~~---~~~g~~~~-~~~~~~~~~~~~~~  212 (335)
                      .+|||          +|++|.+|..++..+...|.+|++++|+.    ++.+.+   ...+...+ .|..+   .+.+.+
T Consensus        11 ~~IlV----------tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d---~~~l~~   77 (346)
T 3i6i_A           11 GRVLI----------AGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE---QEAMEK   77 (346)
T ss_dssp             CCEEE----------ECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC---HHHHHH
T ss_pred             CeEEE----------ECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC---HHHHHH
Confidence            57999          99999999999999999999999999876    444433   23444332 23333   223333


Q ss_pred             HhCCCcccEEEeCCChhh---HHHhhccccCCC---EEE
Q 019790          213 ETGGKGVDVILDCMGASY---FQRNLGSLNIDG---RLF  245 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~~~---~~~~~~~l~~~G---~~v  245 (335)
                      .....++|+||.+++...   ....++.++..|   +++
T Consensus        78 ~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v  116 (346)
T 3i6i_A           78 ILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL  116 (346)
T ss_dssp             HHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred             HHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence            332236999999998632   233444444333   555

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=94.19  E-value=0.15  Score=42.37  Aligned_cols=95  Identities=19%  Similarity=0.108  Sum_probs=63.1

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cC-----C-CE-EEeCC
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-----A-DV-CINYK  202 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g-----~-~~-~~~~~  202 (335)
                      .+.++++||-          .| +| .|..+..+++..|  .+|++++.++...+.+++    .+     . .. +...+
T Consensus        74 ~~~~~~~vLD----------iG-~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d  141 (226)
T 1i1n_A           74 QLHEGAKALD----------VG-SG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD  141 (226)
T ss_dssp             TSCTTCEEEE----------ET-CT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred             hCCCCCEEEE----------Ec-CC-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence            4778999998          77 34 4888888888775  699999999988777653    22     1 22 22211


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                      ...   .   ......||+|+....... ...+.+.|+++|+++..-
T Consensus       142 ~~~---~---~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          142 GRM---G---YAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             GGG---C---CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ccc---C---cccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            110   0   011246999987665543 577889999999998754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=94.17  E-value=0.26  Score=42.78  Aligned_cols=69  Identities=20%  Similarity=0.166  Sum_probs=49.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCC---CEEEeCCCccHHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGA---DVCINYKTEDFVARVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~---~~~~~~~~~~~~~~~~~~  213 (335)
                      .+.+++|          +| +|.+|.+++..+...|+ +|++..|+.++.+.+. +++.   ..+....+         .
T Consensus       125 ~~k~vlv----------lG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---------l  184 (281)
T 3o8q_A          125 KGATILL----------IG-AGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---------L  184 (281)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---------C
T ss_pred             cCCEEEE----------EC-chHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---------h
Confidence            5778999          88 58999999998888997 9999999988766554 3332   12222111         1


Q ss_pred             hCCCcccEEEeCCChh
Q 019790          214 TGGKGVDVILDCMGAS  229 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~  229 (335)
                       . ..+|+||+|++..
T Consensus       185 -~-~~aDiIInaTp~g  198 (281)
T 3o8q_A          185 -K-QSYDVIINSTSAS  198 (281)
T ss_dssp             -C-SCEEEEEECSCCC
T ss_pred             -c-CCCCEEEEcCcCC
Confidence             1 4699999999764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.16  E-value=0.19  Score=38.98  Aligned_cols=94  Identities=19%  Similarity=0.180  Sum_probs=60.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC-hhhHHHHHH---cCCCEEEeCCCccHHHHHHHHhC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVCKD---LGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      ..+++|          .| .|.+|...++.+...|.+|++++++ +++.+.+++   .+.. ++..+..+ .+.+.+. +
T Consensus         3 ~~~vlI----------~G-~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~-~~~l~~a-~   68 (153)
T 1id1_A            3 KDHFIV----------CG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND-SSVLKKA-G   68 (153)
T ss_dssp             CSCEEE----------EC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS-HHHHHHH-T
T ss_pred             CCcEEE----------EC-CCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCC-HHHHHHc-C
Confidence            356778          77 6999999999999999999999986 455544442   2433 33333222 2233332 2


Q ss_pred             CCcccEEEeCCChhhHH----HhhccccCCCEEEEE
Q 019790          216 GKGVDVILDCMGASYFQ----RNLGSLNIDGRLFII  247 (335)
Q Consensus       216 ~~~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~  247 (335)
                      -.++|.++-+++.....    ...+.+.+..+++..
T Consensus        69 i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           69 IDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             TTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             hhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            34799999999875432    234445556677664

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=94.16  E-value=0.28  Score=44.75  Aligned_cols=82  Identities=16%  Similarity=0.175  Sum_probs=52.5

Q ss_pred             cCC-CCCCEEEEeeccccccccccccchHHHHHHHHHhh-CCCeEEEEecChhh----------------HHHHHHcCCC
Q 019790          135 SHL-SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC-QGVRVFVTAGSEEK----------------LAVCKDLGAD  196 (335)
Q Consensus       135 ~~~-~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~-~g~~V~~~~~~~~~----------------~~~~~~~g~~  196 (335)
                      ..+ ..+.++||          +|+++++|.+++..+-. .|++|+++.++.+.                .+.+++.|..
T Consensus        41 ~~~~~~gKvaLV----------TGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~  110 (405)
T 3zu3_A           41 GPIANGPKRVLV----------IGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLY  110 (405)
T ss_dssp             CCCTTCCSEEEE----------ESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCC
T ss_pred             CCcCCCCCEEEE----------eCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCc
Confidence            444 45677899          99999999998888777 89999998765332                1234455544


Q ss_pred             EE-E--eCCCcc----HHHHHHHHhCCCcccEEEeCCCh
Q 019790          197 VC-I--NYKTED----FVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       197 ~~-~--~~~~~~----~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .. +  |-.+..    +.+.+.+..  +++|++++++|.
T Consensus       111 a~~i~~Dvtd~~~v~~~v~~i~~~~--G~IDiLVNNAG~  147 (405)
T 3zu3_A          111 AKSINGDAFSDEIKQLTIDAIKQDL--GQVDQVIYSLAS  147 (405)
T ss_dssp             EEEEESCTTSHHHHHHHHHHHHHHT--SCEEEEEECCCC
T ss_pred             eEEEECCCCCHHHHHHHHHHHHHHc--CCCCEEEEcCcc
Confidence            32 2  222222    223333343  369999999875

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=94.15  E-value=0.044  Score=48.48  Aligned_cols=97  Identities=23%  Similarity=0.172  Sum_probs=64.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC-E-EEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD-V-CINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~-~-~~~~~~~  204 (335)
                      ....+.++++||-          .| +|. |..+..+++..+  .+|++++.+++..+.+++    .+.. . +...+..
T Consensus        69 ~~l~~~~~~~VLD----------iG-cG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~  136 (317)
T 1dl5_A           69 EWVGLDKGMRVLE----------IG-GGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGY  136 (317)
T ss_dssp             HHTTCCTTCEEEE----------EC-CTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred             HhcCCCCcCEEEE----------ec-CCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChh
Confidence            5567889999998          77 444 888888888753  469999999998877764    3432 1 2222111


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~  247 (335)
                      .   ..   .....||+|+....-.. ...+.+.|+++|+++..
T Consensus       137 ~---~~---~~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~  174 (317)
T 1dl5_A          137 Y---GV---PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (317)
T ss_dssp             G---CC---GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             h---cc---ccCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEE
Confidence            1   01   01246999998765543 25677899999999766

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=94.14  E-value=0.29  Score=43.85  Aligned_cols=98  Identities=10%  Similarity=0.049  Sum_probs=60.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH--HHHHHc-CCCEEEeCC-CccHHHHHHHHhC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL--AVCKDL-GADVCINYK-TEDFVARVKEETG  215 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~--~~~~~~-g~~~~~~~~-~~~~~~~~~~~~~  215 (335)
                      +.+|||          +|++|.+|..+++.+...|.+|++++|+.++.  +.+.+. +. .++..+ -.+ .+.+.+...
T Consensus         5 ~~~ilV----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v-~~v~~D~l~d-~~~l~~~~~   72 (352)
T 1xgk_A            5 KKTIAV----------VGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNV-TLFQGPLLNN-VPLMDTLFE   72 (352)
T ss_dssp             CCCEEE----------ESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTE-EEEESCCTTC-HHHHHHHHT
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCc-EEEECCccCC-HHHHHHHHh
Confidence            457999          99999999999998888899999999887654  333332 22 222222 112 233444443


Q ss_pred             CCcccEEEeCCChh------hHHHhhccccC-C--CEEEEEeccC
Q 019790          216 GKGVDVILDCMGAS------YFQRNLGSLNI-D--GRLFIIGTQG  251 (335)
Q Consensus       216 ~~~~d~vid~~g~~------~~~~~~~~l~~-~--G~~v~~g~~~  251 (335)
                        ++|+||.+.+..      .....++.+.. +  ++++.++...
T Consensus        73 --~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           73 --GAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             --TCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             --cCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence              589999776542      11233444333 2  5888887643

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=94.13  E-value=0.13  Score=45.71  Aligned_cols=75  Identities=17%  Similarity=0.173  Sum_probs=47.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh----------hhHHHHHH-cCCC-EEE--eCCCccH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE----------EKLAVCKD-LGAD-VCI--NYKTEDF  206 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~----------~~~~~~~~-~g~~-~~~--~~~~~~~  206 (335)
                      .+|||          +||+|.+|..+++.+...|++|++++++.          +..+.+.+ .+.. ..+  |..+.  
T Consensus         3 ~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~--   70 (348)
T 1ek6_A            3 EKVLV----------TGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ--   70 (348)
T ss_dssp             SEEEE----------ETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH--
T ss_pred             CEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH--
Confidence            57899          99999999999999888899999998642          22333332 1221 222  32332  


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                       +.+.+.....++|+||.+++.
T Consensus        71 -~~~~~~~~~~~~d~vih~A~~   91 (348)
T 1ek6_A           71 -GALQRLFKKYSFMAVIHFAGL   91 (348)
T ss_dssp             -HHHHHHHHHCCEEEEEECCSC
T ss_pred             -HHHHHHHHhcCCCEEEECCCC
Confidence             223332221269999999873

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=94.13  E-value=0.19  Score=45.15  Aligned_cols=89  Identities=22%  Similarity=0.249  Sum_probs=64.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|...++.++..|++|++.+++....+.+.+.|...+     .++    .+..  +.
T Consensus       163 ~gktvGI----------IG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l----~ell--~~  220 (351)
T 3jtm_A          163 EGKTIGT----------VG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----EDL----NEML--PK  220 (351)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SCH----HHHG--GG
T ss_pred             cCCEEeE----------EE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CCH----HHHH--hc
Confidence            5778988          87 8999999999999999999999988766666666775331     122    2222  24


Q ss_pred             ccEEEeCCChh-----hH-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGAS-----YF-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~-----~~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+-+++..     .+ ...+..|+++..++.++.
T Consensus       221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence            79999988742     11 456778888888887764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.12  E-value=0.23  Score=43.16  Aligned_cols=73  Identities=15%  Similarity=0.224  Sum_probs=51.1

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-------hhHHHHH---HcCCCEE-EeCCCccHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-------EKLAVCK---DLGADVC-INYKTEDFVAR  209 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-------~~~~~~~---~~g~~~~-~~~~~~~~~~~  209 (335)
                      .+|||          .||+|.+|..+++.+...|.+|++++|+.       ++.+.++   ..+...+ .|..+   .+.
T Consensus         3 ~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~   69 (307)
T 2gas_A            3 NKILI----------LGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND---HET   69 (307)
T ss_dssp             CCEEE----------ESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTC---HHH
T ss_pred             cEEEE----------ECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCC---HHH
Confidence            56899          99999999999999888899999999886       4443332   3454332 23332   234


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+...  ++|+||.+++.
T Consensus        70 l~~~~~--~~d~vi~~a~~   86 (307)
T 2gas_A           70 LVKAIK--QVDIVICAAGR   86 (307)
T ss_dssp             HHHHHT--TCSEEEECSSS
T ss_pred             HHHHHh--CCCEEEECCcc
Confidence            455443  59999999885

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.08  E-value=0.37  Score=41.72  Aligned_cols=80  Identities=15%  Similarity=0.067  Sum_probs=54.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~  234 (335)
                      +| .|.+|...+..+...|.+|++.++++++.+.+.+.|....     .+..+.+.      ..|+||-|+.. ......
T Consensus         7 IG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~~~~~------~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            7 IG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERA-----ATPCEVVE------SCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHH------HCSEEEECCSSHHHHHHH
T ss_pred             Ee-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeec-----CCHHHHHh------cCCEEEEEcCCHHHHHHH
Confidence            77 8999999999999999999999999999888887765321     12222221      36888888884 344433


Q ss_pred             h-------ccccCCCEEEEE
Q 019790          235 L-------GSLNIDGRLFII  247 (335)
Q Consensus       235 ~-------~~l~~~G~~v~~  247 (335)
                      +       ..++++..++..
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~   94 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDM   94 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEEC
T ss_pred             HcCcchHhhcCCCCCEEEeC
Confidence            3       345555555544

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=94.07  E-value=0.23  Score=45.70  Aligned_cols=82  Identities=15%  Similarity=0.119  Sum_probs=51.8

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHH--HHHHHhhCCCeEEEEecChh---------------h-HHHHHHcCCC
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEE---------------K-LAVCKDLGAD  196 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~--a~~~a~~~g~~V~~~~~~~~---------------~-~~~~~~~g~~  196 (335)
                      .....+.++||          +|+++++|.+  .+..+...|++|+++.++..               . .+.+++.|..
T Consensus        55 ~~~~~gK~aLV----------TGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  124 (418)
T 4eue_A           55 IGFRGPKKVLI----------VGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLV  124 (418)
T ss_dssp             CCCCCCSEEEE----------ESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred             CcCCCCCEEEE----------ECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCc
Confidence            44577889999          9999999998  66656566999999887532               1 1233445544


Q ss_pred             EE-E--eCCCcc----HHHHHHHHhCCCcccEEEeCCCh
Q 019790          197 VC-I--NYKTED----FVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       197 ~~-~--~~~~~~----~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .. +  |-.+..    +.+.+.+..  +++|++++++|.
T Consensus       125 ~~~~~~Dvtd~~~v~~~v~~i~~~~--G~IDiLVnNAG~  161 (418)
T 4eue_A          125 AKNFIEDAFSNETKDKVIKYIKDEF--GKIDLFVYSLAA  161 (418)
T ss_dssp             EEEEESCTTCHHHHHHHHHHHHHTT--CCEEEEEECCCC
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHc--CCCCEEEECCcc
Confidence            32 2  333322    122333333  369999998875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.06  E-value=0.073  Score=47.92  Aligned_cols=73  Identities=16%  Similarity=0.082  Sum_probs=49.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH-cCCCEE-EeCC-CccHHHHHHHHhC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD-LGADVC-INYK-TEDFVARVKEETG  215 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~-~g~~~~-~~~~-~~~~~~~~~~~~~  215 (335)
                      ..+|||          +||+|.+|..+++.+... |.+|++++++..+...+.. .+...+ .|.. +.   +.+.+...
T Consensus        24 ~~~vlV----------tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~---~~~~~~~~   90 (372)
T 3slg_A           24 AKKVLI----------LGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINK---EWVEYHVK   90 (372)
T ss_dssp             CCEEEE----------ESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCH---HHHHHHHH
T ss_pred             CCEEEE----------ECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCH---HHHHHHhc
Confidence            468999          999999999999988887 8999999998766544432 222222 1322 22   23333332


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                        ++|+||.+++
T Consensus        91 --~~d~Vih~A~  100 (372)
T 3slg_A           91 --KCDVILPLVA  100 (372)
T ss_dssp             --HCSEEEECBC
T ss_pred             --cCCEEEEcCc
Confidence              6899999877

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=94.05  E-value=0.22  Score=42.49  Aligned_cols=94  Identities=14%  Similarity=-0.019  Sum_probs=60.9

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCC--------------------
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--------------------  195 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~--------------------  195 (335)
                      ..++.+||.          .|  .+.|..+..+++. |++|++++.++...+.+++ .+.                    
T Consensus        66 ~~~~~~vLD----------~G--CG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (252)
T 2gb4_A           66 GQSGLRVFF----------PL--CGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS  132 (252)
T ss_dssp             TCCSCEEEE----------TT--CTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred             CCCCCeEEE----------eC--CCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCC
Confidence            457889999          76  4567778888876 9999999999999888864 321                    


Q ss_pred             -CE-EEeCCCccHHHHHHHHhCCCcccEEEeCCC-----hh----hHHHhhccccCCCEEEEEe
Q 019790          196 -DV-CINYKTEDFVARVKEETGGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       196 -~~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~g  248 (335)
                       .. .+..+...+.     ......||+|++...     ..    .+..+.+.|+|+|+++++.
T Consensus       133 ~~i~~~~~D~~~l~-----~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          133 GSISLYCCSIFDLP-----RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             SSEEEEESCTTTGG-----GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CceEEEECccccCC-----cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence             11 1111111110     111147999997432     11    2466789999999986553

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=94.04  E-value=0.047  Score=48.42  Aligned_cols=77  Identities=13%  Similarity=0.107  Sum_probs=48.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHH-HHHcCCCEEE--eCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV-CKDLGADVCI--NYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~-~~~~g~~~~~--~~~~~~~~~~~~~~~~  215 (335)
                      .+.+|||          +|++|.+|..+++.+...|++|++++++...... +..+..-..+  |..+..   .+.+...
T Consensus        19 ~~~~vlV----------TGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~---~~~~~~~   85 (330)
T 2pzm_A           19 SHMRILI----------TGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAG---LLERAFD   85 (330)
T ss_dssp             TCCEEEE----------ETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHH---HHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHH---HHHHHHh
Confidence            4678999          9999999999999999899999999985433211 1111111122  323322   2222221


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                      ..++|+||.+++.
T Consensus        86 ~~~~D~vih~A~~   98 (330)
T 2pzm_A           86 SFKPTHVVHSAAA   98 (330)
T ss_dssp             HHCCSEEEECCCC
T ss_pred             hcCCCEEEECCcc
Confidence            1168999999873

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=94.04  E-value=0.35  Score=43.37  Aligned_cols=88  Identities=17%  Similarity=0.185  Sum_probs=62.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          +| .|.+|..+++.++..|++|++.+++. +.+.+.+.|...+     .++.+.+.      .
T Consensus       159 ~g~tvGI----------IG-lG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~-----~~l~ell~------~  215 (352)
T 3gg9_A          159 KGQTLGI----------FG-YGKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVA-----ESKDALFE------Q  215 (352)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEEC-----SSHHHHHH------H
T ss_pred             CCCEEEE----------Ee-ECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEe-----CCHHHHHh------h
Confidence            4668888          77 89999999999999999999999775 3344556665321     12222221      3


Q ss_pred             ccEEEeCCChhh------HHHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY------FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~------~~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+-++....      ....+..|+++..++.++.
T Consensus       216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            799999886421      1456788999998888863

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=94.03  E-value=0.36  Score=41.96  Aligned_cols=81  Identities=16%  Similarity=0.082  Sum_probs=55.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh-hhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-~~~~~~  234 (335)
                      +| .|.+|...+..+...|.+|++.++++++.+.+.+.|...   .  .+..+.+      ...|+||.|++. ..+...
T Consensus        11 iG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~---~--~~~~~~~------~~~D~vi~~v~~~~~~~~~   78 (299)
T 1vpd_A           11 IG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET---A--STAKAIA------EQCDVIITMLPNSPHVKEV   78 (299)
T ss_dssp             EC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE---C--SSHHHHH------HHCSEEEECCSSHHHHHHH
T ss_pred             EC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee---c--CCHHHHH------hCCCEEEEECCCHHHHHHH
Confidence            77 899999999988888999999999998888887766421   1  1222222      147999999984 444444


Q ss_pred             h-------ccccCCCEEEEEe
Q 019790          235 L-------GSLNIDGRLFIIG  248 (335)
Q Consensus       235 ~-------~~l~~~G~~v~~g  248 (335)
                      +       ..++++..++.++
T Consensus        79 ~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           79 ALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HHSTTCHHHHCCTTCEEEECS
T ss_pred             HhCcchHhhcCCCCCEEEECC
Confidence            3       4456666665553

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=93.99  E-value=0.18  Score=44.57  Aligned_cols=88  Identities=14%  Similarity=0.107  Sum_probs=63.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -.|.++.|          +| .|.+|...++.++..|++|++.+++.++. .+.+.|...  .    +..+.+ +     
T Consensus       140 l~g~~vgI----------IG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~--~----~l~ell-~-----  195 (313)
T 2ekl_A          140 LAGKTIGI----------VG-FGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA--V----SLEELL-K-----  195 (313)
T ss_dssp             CTTCEEEE----------ES-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE--C----CHHHHH-H-----
T ss_pred             CCCCEEEE----------Ee-eCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee--c----CHHHHH-h-----
Confidence            35678988          87 89999999999999999999999887654 355677532  1    222222 1     


Q ss_pred             cccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          218 GVDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       218 ~~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      ..|+|+.+++...     + ...+..+++++.++.++.
T Consensus       196 ~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~ar  233 (313)
T 2ekl_A          196 NSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSR  233 (313)
T ss_dssp             HCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred             hCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence            4799999987532     1 456678898888887765

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=93.98  E-value=0.68  Score=40.74  Aligned_cols=75  Identities=12%  Similarity=0.182  Sum_probs=49.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecC---hhhHHHHH-Hc----CCC-EEEeCCCccHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS---EEKLAVCK-DL----GAD-VCINYKTEDFVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~---~~~~~~~~-~~----g~~-~~~~~~~~~~~~  208 (335)
                      .+.++||          +| +|++|.+++..+...|+ +|+++.|+   .++.+.+. ++    +.. ...+..+..+  
T Consensus       147 ~gk~~lV----------lG-AGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~--  213 (312)
T 3t4e_A          147 RGKTMVL----------LG-AGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHA--  213 (312)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHH--
T ss_pred             CCCEEEE----------EC-cCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhh--
Confidence            5778999          88 69999999999999998 89999999   65555443 22    221 2233322111  


Q ss_pred             HHHHHhCCCcccEEEeCCChh
Q 019790          209 RVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~~  229 (335)
                       +.+..  ..+|+||+|++..
T Consensus       214 -~~~~l--~~~DiIINaTp~G  231 (312)
T 3t4e_A          214 -FTEAL--ASADILTNGTKVG  231 (312)
T ss_dssp             -HHHHH--HHCSEEEECSSTT
T ss_pred             -hHhhc--cCceEEEECCcCC
Confidence             11111  2489999998753

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=93.98  E-value=0.21  Score=45.11  Aligned_cols=89  Identities=12%  Similarity=0.072  Sum_probs=64.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .|.+|.|          +| .|.+|...++.++..|++ |++.+++....+.+.+.|...+     .++.+.+      .
T Consensus       163 ~g~tvgI----------IG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell------~  220 (364)
T 2j6i_A          163 EGKTIAT----------IG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----ENIEELV------A  220 (364)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHH------H
T ss_pred             CCCEEEE----------EC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CCHHHHH------h
Confidence            5778988          87 899999999999999997 9999987766666666664321     1222222      1


Q ss_pred             cccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          218 GVDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       218 ~~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      ..|+|+.+++...     + ...+..|++++.++.++.
T Consensus       221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~ar  258 (364)
T 2j6i_A          221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTAR  258 (364)
T ss_dssp             TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence            4799999887631     2 346778888888887764

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=93.96  E-value=0.3  Score=40.75  Aligned_cols=99  Identities=17%  Similarity=0.175  Sum_probs=64.1

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCC---EEEeCCCccH
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD---VCINYKTEDF  206 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~  206 (335)
                      +.......++.+||-          .|  ++.|..+..+++. |. ++++++.++...+.+++....   .....+....
T Consensus        35 l~~~~~~~~~~~vLd----------iG--~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~  101 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVD----------LG--CGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKL  101 (243)
T ss_dssp             HHHHSCCCTTCEEEE----------ET--CTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGC
T ss_pred             HHHhccccCCCEEEE----------Ec--CcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhc
Confidence            445556667888888          76  3346777777776 77 999999999988888765421   1222111111


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEe
Q 019790          207 VARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  248 (335)
                            ......||+|+....-       ..+..+.+.|+++|+++...
T Consensus       102 ------~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          102 ------HLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             ------CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ------cCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence                  0123479999865431       23567788999999998753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=93.95  E-value=0.034  Score=46.78  Aligned_cols=99  Identities=14%  Similarity=0.151  Sum_probs=60.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      +.++||          +||+|.+|..+++.+...|+  +|++++|++++.+.....+. ..+..+-.+ .+.+.+...  
T Consensus        18 ~~~vlV----------tGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~d-~~~~~~~~~--   83 (242)
T 2bka_A           18 NKSVFI----------LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDFEK-LDDYASAFQ--   83 (242)
T ss_dssp             CCEEEE----------ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCGGG-GGGGGGGGS--
T ss_pred             CCeEEE----------ECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc-eEEecCcCC-HHHHHHHhc--
Confidence            568999          99999999999999998999  99999987654322211122 222111111 122333332  


Q ss_pred             cccEEEeCCChhh---------------HHHhhccccC--CCEEEEEeccCC
Q 019790          218 GVDVILDCMGASY---------------FQRNLGSLNI--DGRLFIIGTQGG  252 (335)
Q Consensus       218 ~~d~vid~~g~~~---------------~~~~~~~l~~--~G~~v~~g~~~~  252 (335)
                      ++|++|.|+|...               ....++.+..  .++++.++....
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           84 GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            6899999998421               1122333332  368998876554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=93.88  E-value=0.31  Score=47.19  Aligned_cols=77  Identities=16%  Similarity=0.260  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC--hhhHHHHHHcCCCEEEeCCCc-----cHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS--EEKLAVCKDLGADVCINYKTE-----DFVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~--~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~  211 (335)
                      .+..+||          +|+++++|.+.++.+...|++|++..+.  ++..+.+++.+........+.     .+.+.+.
T Consensus       321 ~gkvalV----------TGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~  390 (604)
T 2et6_A          321 KDKVVLI----------TGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVI  390 (604)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred             CCCeEEE----------ECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHH
Confidence            3567899          9999999999999999999999998743  222344445554433333332     1223333


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +..  .++|++++++|
T Consensus       391 ~~~--G~iDiLVnNAG  404 (604)
T 2et6_A          391 DKY--GTIDILVNNAG  404 (604)
T ss_dssp             HHH--SCCCEEEECCC
T ss_pred             Hhc--CCCCEEEECCC
Confidence            333  36999999987

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=93.87  E-value=0.61  Score=42.16  Aligned_cols=116  Identities=12%  Similarity=0.141  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecC----hhh---------HHH
Q 019790          124 ACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS----EEK---------LAV  189 (335)
Q Consensus       124 ~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~----~~~---------~~~  189 (335)
                      ....+.++.....--+..+|++          .| .|..|..+++++..+|+ +|++++++    .++         ..+
T Consensus       176 lAal~~A~~i~g~~l~~~kVVv----------~G-AGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~  244 (388)
T 1vl6_A          176 SAAFLNALKLTEKKIEEVKVVV----------NG-IGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEI  244 (388)
T ss_dssp             HHHHHHHHHHHTCCTTTCEEEE----------EC-CSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEEEE----------EC-CCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHH
Confidence            3344444533332235567888          77 79999999999999999 89999987    443         233


Q ss_pred             HHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHh
Q 019790          190 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF  263 (335)
Q Consensus       190 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  263 (335)
                      ++....    ......+.+    ...  ++|++|-+++... ....++.|+++.-++.+..+.   .+..+...+
T Consensus       245 A~~~~~----~~~~~~L~e----av~--~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt---~E~~p~~a~  306 (388)
T 1vl6_A          245 ARITNP----ERLSGDLET----ALE--GADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV---PEIDPELAR  306 (388)
T ss_dssp             HHTSCT----TCCCSCHHH----HHT--TCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS---CSSCHHHHH
T ss_pred             HHhhhc----cCchhhHHH----HHc--cCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC---CCCCHHHHH
Confidence            333221    111233333    333  4799999887533 366778888877555555443   344444443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=93.87  E-value=0.026  Score=49.93  Aligned_cols=119  Identities=9%  Similarity=0.021  Sum_probs=68.1

Q ss_pred             cCcchHHHHHHHHHHh--------cC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH-
Q 019790          119 AFPEVACTVWSTVFMT--------SH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-  188 (335)
Q Consensus       119 ~~~~~~~~a~~~l~~~--------~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~-  188 (335)
                      .+||....+...+.+.        .+ --.|.+++|          .|+...+|..+++++...|++|++..++..+.. 
T Consensus       147 ~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvV----------IG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~  216 (320)
T 1edz_A          147 ILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIV----------INRSEIVGRPLAALLANDGATVYSVDVNNIQKFT  216 (320)
T ss_dssp             CCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEE----------ECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE
T ss_pred             cCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEE----------ECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh
Confidence            3555555555555442        12 236778888          885446799999999999999999987633221 


Q ss_pred             HHHHcCC--CEEEeCC-CccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccC
Q 019790          189 VCKDLGA--DVCINYK-TEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       189 ~~~~~g~--~~~~~~~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      ....++.  ....... . + .+.+.+.+.  .+|+||.++|...+.---+.++++-.++.+|...
T Consensus       217 ra~~la~~~~~~t~~~~t-~-~~~L~e~l~--~ADIVIsAtg~p~~vI~~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          217 RGESLKLNKHHVEDLGEY-S-EDLLKKCSL--DSDVVITGVPSENYKFPTEYIKEGAVCINFACTK  278 (320)
T ss_dssp             SCCCSSCCCCEEEEEEEC-C-HHHHHHHHH--HCSEEEECCCCTTCCBCTTTSCTTEEEEECSSSC
T ss_pred             HHHHHhhhcccccccccc-c-HhHHHHHhc--cCCEEEECCCCCcceeCHHHcCCCeEEEEcCCCc
Confidence            1112221  1110000 0 0 023444432  4899999999864311234467776777777643

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=93.86  E-value=0.2  Score=40.03  Aligned_cols=97  Identities=10%  Similarity=0.146  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC----EEEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD----VCINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~----~~~~~~~~  204 (335)
                      ......++.+||-          .|  ++.|..+..+++. +.++++++.+++..+.+++    .+..    .++..+..
T Consensus        46 ~~~~~~~~~~vLd----------iG--~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~  112 (194)
T 1dus_A           46 ENVVVDKDDDILD----------LG--CGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLY  112 (194)
T ss_dssp             HHCCCCTTCEEEE----------ET--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTT
T ss_pred             HHcccCCCCeEEE----------eC--CCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchh
Confidence            5556678888888          76  3357777788887 8899999999988777764    2322    22322221


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCC----h----hhHHHhhccccCCCEEEEEec
Q 019790          205 DFVARVKEETGGKGVDVILDCMG----A----SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      ..       .....||+|+-...    .    ..+..+.+.|+++|+++....
T Consensus       113 ~~-------~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  158 (194)
T 1dus_A          113 EN-------VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ  158 (194)
T ss_dssp             TT-------CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cc-------cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence            11       11347999997543    1    224667788999999987743

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=93.85  E-value=0.22  Score=42.08  Aligned_cols=73  Identities=18%  Similarity=0.245  Sum_probs=48.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE-EEeCCCcc-HHH---HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTED-FVA---RVKEE  213 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~-~~~---~~~~~  213 (335)
                      .+.++||          +|+++.+|.+++..+...|++|++++++++.    ++.+... ..|-.+.. +.+   .+.+.
T Consensus         6 ~~k~vlV----------TGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            6 SGKNVWV----------TGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----EQYPFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----SCCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----hcCCceEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999          9999999999999999999999999987652    1223211 12333322 222   22222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      .  .++|++|+++|
T Consensus        72 ~--g~id~lv~~Ag   83 (250)
T 2fwm_X           72 T--ERLDALVNAAG   83 (250)
T ss_dssp             C--SCCCEEEECCC
T ss_pred             c--CCCCEEEECCC
Confidence            2  36999999987

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=93.84  E-value=0.27  Score=43.77  Aligned_cols=76  Identities=14%  Similarity=0.154  Sum_probs=49.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh----hHHHHHH-c----CCC-EEEeCCCccHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE----KLAVCKD-L----GAD-VCINYKTEDFVAR  209 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~----~~~~~~~-~----g~~-~~~~~~~~~~~~~  209 (335)
                      +.+|||          +|++|.+|..++..+...|++|++++++..    ..+.+.+ +    +.. ..+..+-.+ .+.
T Consensus        27 ~~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~   95 (352)
T 1sb8_A           27 PKVWLI----------TGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRN-LDD   95 (352)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTS-HHH
T ss_pred             CCeEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCC-HHH
Confidence            468999          999999999999999989999999998642    2332221 1    111 222222222 233


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+...  ++|+||.+++.
T Consensus        96 ~~~~~~--~~d~vih~A~~  112 (352)
T 1sb8_A           96 CNNACA--GVDYVLHQAAL  112 (352)
T ss_dssp             HHHHHT--TCSEEEECCSC
T ss_pred             HHHHhc--CCCEEEECCcc
Confidence            444443  69999999873

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=93.83  E-value=0.093  Score=45.10  Aligned_cols=98  Identities=16%  Similarity=0.080  Sum_probs=62.1

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE--EEeCCCccHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARV  210 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~  210 (335)
                      ...++.++.+||-          .|  ++.|..+..+++. |++|++++.+++..+.+++.....  ..+..+...  ..
T Consensus        39 ~~l~l~~g~~VLD----------lG--cGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~--~~  103 (261)
T 3iv6_A           39 FLENIVPGSTVAV----------IG--ASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITA--EI  103 (261)
T ss_dssp             HTTTCCTTCEEEE----------EC--TTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTS--CC
T ss_pred             HhcCCCCcCEEEE----------Ee--CcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeeccc--cc
Confidence            5567788999988          77  4567788888775 889999999999998887533211  111111110  00


Q ss_pred             HHHhCCCcccEEEeCCC-----hh----hHHHhhccccCCCEEEEE
Q 019790          211 KEETGGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      .... ...||+|+-+..     .+    .+..+.+.| |+|+++..
T Consensus       104 ~~~~-~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          104 PKEL-AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             CGGG-TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             cccc-CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            0001 247999987532     11    245567778 99998754

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=93.81  E-value=0.054  Score=48.05  Aligned_cols=77  Identities=14%  Similarity=0.107  Sum_probs=48.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHHHHcCCCEEE--eCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCI--NYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~--~~~~~~~~~~~~~~~~  215 (335)
                      .+.+|||          +||+|.+|..++..+...|++|++++++.... +.+..+..-..+  |..+.   +.+.+...
T Consensus        20 ~~~~vlV----------TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~---~~~~~~~~   86 (333)
T 2q1w_A           20 HMKKVFI----------TGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADH---ALVNQLIG   86 (333)
T ss_dssp             -CCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCH---HHHHHHHH
T ss_pred             CCCEEEE----------eCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCH---HHHHHHHh
Confidence            3568999          99999999999999988999999999864321 111111111122  32222   22333222


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                      +..+|+||.+++.
T Consensus        87 ~~~~D~vih~A~~   99 (333)
T 2q1w_A           87 DLQPDAVVHTAAS   99 (333)
T ss_dssp             HHCCSEEEECCCC
T ss_pred             ccCCcEEEECcee
Confidence            2258999998873

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=93.78  E-value=0.28  Score=44.74  Aligned_cols=96  Identities=21%  Similarity=0.255  Sum_probs=60.3

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCccHHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVK  211 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~  211 (335)
                      +++|++||=          .+  ++.|..++.+++. |++|++++.++...+.+++    .+.. .+.   ..+..+.+.
T Consensus       212 ~~~g~~VLD----------lg--~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~---~~D~~~~l~  275 (393)
T 4dmg_A          212 VRPGERVLD----------VY--SYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIR---HGEALPTLR  275 (393)
T ss_dssp             CCTTCEEEE----------ES--CTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEE---ESCHHHHHH
T ss_pred             hcCCCeEEE----------cc--cchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEE---EccHHHHHH
Confidence            346888877          44  3345555566654 8889999999998877753    3433 333   233333333


Q ss_pred             HHhCCCcccEEEeCCCh----------------hhHHHhhccccCCCEEEEEecc
Q 019790          212 EETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      .. .+. ||+|+-..+.                ..+..+.+.|+++|.++.+...
T Consensus       276 ~~-~~~-fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s  328 (393)
T 4dmg_A          276 GL-EGP-FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS  328 (393)
T ss_dssp             TC-CCC-EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             Hh-cCC-CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence            22 344 9999853332                2346678899999999876543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=93.78  E-value=0.041  Score=48.98  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=48.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh----HHHHHHc------CCCE-EE--eCCCccH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK----LAVCKDL------GADV-CI--NYKTEDF  206 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~----~~~~~~~------g~~~-~~--~~~~~~~  206 (335)
                      +.++||          +|+++.+|.+++..+...|++|+++.++..+    .+.++..      +... .+  |-.+..-
T Consensus         2 ~k~vlV----------TGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~   71 (327)
T 1jtv_A            2 RTVVLI----------TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKS   71 (327)
T ss_dssp             CEEEEE----------SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHH
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHH
Confidence            467899          9999999999999999999998877654322    1222221      1222 22  3333222


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+.....++|++|+++|
T Consensus        72 v~~~~~~~~~g~iD~lVnnAG   92 (327)
T 1jtv_A           72 VAAARERVTEGRVDVLVCNAG   92 (327)
T ss_dssp             HHHHHHTCTTSCCSEEEECCC
T ss_pred             HHHHHHHHhcCCCCEEEECCC
Confidence            222322222347999999886

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=93.76  E-value=0.17  Score=42.77  Aligned_cols=94  Identities=16%  Similarity=0.174  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCCE-EEeCCCccHHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GADV-CINYKTEDFVAR  209 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~  209 (335)
                      ..+.++.+||-          .|  ++.|..+..+++. +.+|++++.+++..+.+++.    .... ....+...+.  
T Consensus        35 ~~~~~~~~vLD----------iG--~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--   99 (263)
T 2yqz_A           35 HPKGEEPVFLE----------LG--VGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP--   99 (263)
T ss_dssp             CCSSSCCEEEE----------ET--CTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC--
T ss_pred             cCCCCCCEEEE----------eC--CcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC--
Confidence            36678888888          76  3347777777776 88999999999988888754    1222 2222211110  


Q ss_pred             HHHHhCCCcccEEEeCCC-------hhhHHHhhccccCCCEEEEE
Q 019790          210 VKEETGGKGVDVILDCMG-------ASYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~  247 (335)
                          .....||+|+....       ...+..+.+.|+++|+++..
T Consensus       100 ----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          100 ----LPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             ----SCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ----CCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence                12346999997543       12356778999999999766

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=93.75  E-value=0.15  Score=42.28  Aligned_cols=100  Identities=13%  Similarity=0.080  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVAR  209 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~  209 (335)
                      ...++.+||-          .|  .+.|..++.+++.+  +.+|+.++.+++..+.+++    .+...-+.....+..+.
T Consensus        55 ~~~~~~~vLd----------iG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~  122 (221)
T 3u81_A           55 REYSPSLVLE----------LG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL  122 (221)
T ss_dssp             HHHCCSEEEE----------EC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred             HhcCCCEEEE----------EC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence            3356778888          76  45678888888865  6799999999988877754    34321011111222222


Q ss_pred             HHHHh---CCCcccEEEeCCChhhH------HHhhccccCCCEEEEE
Q 019790          210 VKEET---GGKGVDVILDCMGASYF------QRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~---~~~~~d~vid~~g~~~~------~~~~~~l~~~G~~v~~  247 (335)
                      +....   ....||+||-.......      ...++.|+++|.++.-
T Consensus       123 l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~  169 (221)
T 3u81_A          123 IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLAD  169 (221)
T ss_dssp             GGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEES
T ss_pred             HHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEe
Confidence            22221   11479999865433221      1122789999988753

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=93.71  E-value=0.24  Score=43.87  Aligned_cols=88  Identities=8%  Similarity=0.001  Sum_probs=62.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .|.++.|          +| .|.+|...++.++..|++|++.++ +.+. ..+.+.|... .    .++.+.+ +     
T Consensus       145 ~g~~vgI----------IG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~-~----~~l~ell-~-----  201 (320)
T 1gdh_A          145 DNKTLGI----------YG-FGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATF-H----DSLDSLL-S-----  201 (320)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEE-C----SSHHHHH-H-----
T ss_pred             CCCEEEE----------EC-cCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEE-c----CCHHHHH-h-----
Confidence            5678888          77 899999999999999999999998 7655 3455667532 1    1222222 1     


Q ss_pred             cccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          218 GVDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       218 ~~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      ..|+|+.|+....     + ...+..++++..++.++.
T Consensus       202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence            4799999987531     1 345678888888887765

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=93.71  E-value=0.4  Score=41.36  Aligned_cols=88  Identities=15%  Similarity=0.175  Sum_probs=57.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH-HcCC--CEEEeCCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGA--DVCINYKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~-~~g~--~~~~~~~~~~~~~~~~~~~  214 (335)
                      .+.+++|          +| +|++|.+++..+...|+ +|++..|+.++.+.+. +++.  .......  +    +.   
T Consensus       119 ~~k~~lv----------lG-aGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~----l~---  178 (272)
T 3pwz_A          119 RNRRVLL----------LG-AGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE--A----LE---  178 (272)
T ss_dssp             TTSEEEE----------EC-CSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--G----GT---
T ss_pred             cCCEEEE----------EC-ccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--H----hc---
Confidence            5778999          88 68999999999999996 9999999998876654 4442  1222211  1    11   


Q ss_pred             CCCcccEEEeCCChhhHHH----hhccccCCCEEEEE
Q 019790          215 GGKGVDVILDCMGASYFQR----NLGSLNIDGRLFII  247 (335)
Q Consensus       215 ~~~~~d~vid~~g~~~~~~----~~~~l~~~G~~v~~  247 (335)
                      . ..+|+||+|++......    -...++++..++.+
T Consensus       179 ~-~~~DivInaTp~gm~~~~~~i~~~~l~~~~~V~Dl  214 (272)
T 3pwz_A          179 G-QSFDIVVNATSASLTADLPPLPADVLGEAALAYEL  214 (272)
T ss_dssp             T-CCCSEEEECSSGGGGTCCCCCCGGGGTTCSEEEES
T ss_pred             c-cCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEe
Confidence            1 46999999998643110    12345555555544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=93.71  E-value=0.12  Score=45.70  Aligned_cols=74  Identities=15%  Similarity=0.179  Sum_probs=49.3

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|||          +||+|.+|..+++.+...|++|++++++..+.+.+...+... +..+-.+ .+.+.+...  ++|
T Consensus        14 M~ilV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~-~~~Dl~d-~~~~~~~~~--~~d   79 (342)
T 2x4g_A           14 VKYAV----------LGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPEC-RVAEMLD-HAGLERALR--GLD   79 (342)
T ss_dssp             CEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEE-EECCTTC-HHHHHHHTT--TCS
T ss_pred             CEEEE----------ECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEE-EEecCCC-HHHHHHHHc--CCC
Confidence            47999          999999999999999999999999998876544333323322 2222222 234455443  599


Q ss_pred             EEEeCCCh
Q 019790          221 VILDCMGA  228 (335)
Q Consensus       221 ~vid~~g~  228 (335)
                      +||.+++.
T Consensus        80 ~vih~a~~   87 (342)
T 2x4g_A           80 GVIFSAGY   87 (342)
T ss_dssp             EEEEC---
T ss_pred             EEEECCcc
Confidence            99999873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=93.69  E-value=0.26  Score=42.66  Aligned_cols=67  Identities=9%  Similarity=0.075  Sum_probs=47.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                      +|.+|.+|...+..+...|.+|++.++++++.+.+.+.|... .  +..       +..  ...|+||.|+........
T Consensus        17 IG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~--~~~-------~~~--~~aDvVi~av~~~~~~~v   83 (286)
T 3c24_A           17 LGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-T--DGD-------GWI--DEADVVVLALPDNIIEKV   83 (286)
T ss_dssp             ETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-C--CSS-------GGG--GTCSEEEECSCHHHHHHH
T ss_pred             ECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-C--CHH-------HHh--cCCCEEEEcCCchHHHHH
Confidence            884499999999999889999999999998888877766322 1  111       111  247888888876554433

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=93.68  E-value=0.081  Score=46.89  Aligned_cols=72  Identities=13%  Similarity=0.084  Sum_probs=46.5

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHc-CCCEE-EeCCCccHHHHHHHHhCCCc
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL-GADVC-INYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~  218 (335)
                      +|||          +|++|.+|..+++.+... |++|++++++..+.+.+... +...+ .|..+..  +.+.+..  .+
T Consensus         2 ~vlV----------tGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~--~~   67 (345)
T 2bll_A            2 RVLI----------LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS--EWIEYHV--KK   67 (345)
T ss_dssp             EEEE----------ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS--HHHHHHH--HH
T ss_pred             eEEE----------ECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcH--HHHHhhc--cC
Confidence            6889          999999999999998887 89999999987654332211 22111 1322211  1222222  15


Q ss_pred             ccEEEeCCC
Q 019790          219 VDVILDCMG  227 (335)
Q Consensus       219 ~d~vid~~g  227 (335)
                      +|+||.+++
T Consensus        68 ~d~vih~A~   76 (345)
T 2bll_A           68 CDVVLPLVA   76 (345)
T ss_dssp             CSEEEECBC
T ss_pred             CCEEEEccc
Confidence            899999876

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=93.63  E-value=0.2  Score=45.18  Aligned_cols=91  Identities=12%  Similarity=0.189  Sum_probs=64.3

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|+|          +|+ |.+|..+++.+.. ..+|.+.+++.++.+.+++......+|..+   .+.+.+...  +.|
T Consensus        17 mkilv----------lGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d---~~~l~~~~~--~~D   79 (365)
T 3abi_A           17 MKVLI----------LGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASN---FDKLVEVMK--EFE   79 (365)
T ss_dssp             CEEEE----------ECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTC---HHHHHHHHT--TCS
T ss_pred             cEEEE----------ECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCC---HHHHHHHHh--CCC
Confidence            47999          985 9999999888754 578999999998888877654333344333   234555554  589


Q ss_pred             EEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          221 VILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       221 ~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                      +|++|++... ...+-.++..+=.++.+.
T Consensus        80 vVi~~~p~~~~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           80 LVIGALPGFLGFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             EEEECCCGGGHHHHHHHHHHHTCEEEECC
T ss_pred             EEEEecCCcccchHHHHHHhcCcceEeee
Confidence            9999999754 344455666677777764

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=93.62  E-value=0.23  Score=44.19  Aligned_cols=89  Identities=12%  Similarity=0.002  Sum_probs=63.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          +| .|.+|..+++.++..|++|++.+++....+...+.|...    .  ++.+.+ +     .
T Consensus       144 ~g~tvGI----------IG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~----~--~l~ell-~-----~  200 (330)
T 4e5n_A          144 DNATVGF----------LG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ----V--ACSELF-A-----S  200 (330)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE----C--CHHHHH-H-----H
T ss_pred             CCCEEEE----------Ee-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee----C--CHHHHH-h-----h
Confidence            4678888          77 899999999999999999999998875555555666421    1  222222 1     3


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEecc
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~~  250 (335)
                      .|+|+-++....     + ...+..|+++..++.++..
T Consensus       201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCC
Confidence            799999887421     1 4567888988888887643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=93.60  E-value=0.35  Score=39.64  Aligned_cols=83  Identities=13%  Similarity=0.022  Sum_probs=53.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC-----CCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-----ADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g-----~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      +|++|.+|...+..+...|.+|++.++++++.+.+.+ .+     .+...    .+..+.+      ...|+||.|+...
T Consensus         6 iGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~D~Vi~~~~~~   75 (212)
T 1jay_A            6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITG----MKNEDAA------EACDIAVLTIPWE   75 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEE----EEHHHHH------HHCSEEEECSCHH
T ss_pred             EcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCCh----hhHHHHH------hcCCEEEEeCChh
Confidence            8878999999998888889999999999887766543 23     22211    2222222      2489999999976


Q ss_pred             hHHHhhcccc---CCCEEEEEe
Q 019790          230 YFQRNLGSLN---IDGRLFIIG  248 (335)
Q Consensus       230 ~~~~~~~~l~---~~G~~v~~g  248 (335)
                      .....+..+.   ++..++.+.
T Consensus        76 ~~~~~~~~l~~~~~~~~vi~~~   97 (212)
T 1jay_A           76 HAIDTARDLKNILREKIVVSPL   97 (212)
T ss_dssp             HHHHHHHHTHHHHTTSEEEECC
T ss_pred             hHHHHHHHHHHHcCCCEEEEcC
Confidence            5544433222   344445543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=93.57  E-value=0.095  Score=46.59  Aligned_cols=69  Identities=16%  Similarity=0.160  Sum_probs=47.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~  216 (335)
                      .++.+|||          +||+|.+|..+++.+...|++|+++++++..      .+...+ .|..+.   +.+.+... 
T Consensus        17 ~~~~~vlV----------tGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~---~~~~~~~~-   76 (347)
T 4id9_A           17 RGSHMILV----------TGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDG---QALSDAIM-   76 (347)
T ss_dssp             ----CEEE----------ETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCH---HHHHHHHT-
T ss_pred             cCCCEEEE----------ECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCH---HHHHHHHh-
Confidence            45678999          9999999999999999999999999987654      233332 233322   33444443 


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                       ++|+||.+++
T Consensus        77 -~~d~vih~A~   86 (347)
T 4id9_A           77 -GVSAVLHLGA   86 (347)
T ss_dssp             -TCSEEEECCC
T ss_pred             -CCCEEEECCc
Confidence             6999999876

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=93.54  E-value=0.2  Score=43.42  Aligned_cols=74  Identities=16%  Similarity=0.127  Sum_probs=51.7

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhH--HHHHHcCCCEEE-eCCCccHHHHHHHHhC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKL--AVCKDLGADVCI-NYKTEDFVARVKEETG  215 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~~~~  215 (335)
                      ..+|||          +|++|.+|..+++.+...| .+|++++|++++.  +.+...+...+. |..+   .+.+.+...
T Consensus         5 ~~~ilV----------tGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d---~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVV----------FGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDD---QVIMELALN   71 (299)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTC---HHHHHHHHT
T ss_pred             CCEEEE----------ECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCC---HHHHHHHHh
Confidence            357999          9999999999999888888 8999999987653  233344543322 3222   234445443


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                        ++|.||.+++.
T Consensus        72 --~~d~vi~~a~~   82 (299)
T 2wm3_A           72 --GAYATFIVTNY   82 (299)
T ss_dssp             --TCSEEEECCCH
T ss_pred             --cCCEEEEeCCC
Confidence              58999999874

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=93.53  E-value=0.24  Score=40.11  Aligned_cols=94  Identities=19%  Similarity=0.261  Sum_probs=60.0

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCCEEE-eCCCccHHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GADVCI-NYKTEDFVARVK  211 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~-~~~~~~~~~~~~  211 (335)
                      +.++ +||-          .| +| .|..+..+++. |++|++++.+++..+.+++.    +....+ ..+....     
T Consensus        28 ~~~~-~vLd----------iG-cG-~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-----   88 (202)
T 2kw5_A           28 IPQG-KILC----------LA-EG-EGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADF-----   88 (202)
T ss_dssp             SCSS-EEEE----------CC-CS-CTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTB-----
T ss_pred             CCCC-CEEE----------EC-CC-CCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhc-----
Confidence            4566 8888          77 34 37777777775 88999999999887777642    332222 1111111     


Q ss_pred             HHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEecc
Q 019790          212 EETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                       ......||+|+.+...       ..+..+.+.|+++|+++.....
T Consensus        89 -~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  133 (202)
T 2kw5_A           89 -DIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFA  133 (202)
T ss_dssp             -SCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred             -CCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence             0123479999875321       2246778999999999877543

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=93.50  E-value=0.34  Score=39.75  Aligned_cols=96  Identities=19%  Similarity=0.202  Sum_probs=63.6

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH--HhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE--ETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~  215 (335)
                      .++.+||-          .|  ++.|..+..+++. |++|++++.++...+.+++.+.......+   +. .+..  ...
T Consensus        51 ~~~~~vLd----------iG--~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~---~~-~~~~~~~~~  113 (227)
T 3e8s_A           51 RQPERVLD----------LG--CGEGWLLRALADR-GIEAVGVDGDRTLVDAARAAGAGEVHLAS---YA-QLAEAKVPV  113 (227)
T ss_dssp             TCCSEEEE----------ET--CTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHTCSSCEEECC---HH-HHHTTCSCC
T ss_pred             CCCCEEEE----------eC--CCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhcccccchhh---HH-hhccccccc
Confidence            45678887          76  3457777777777 88999999999999888876433333222   11 1111  123


Q ss_pred             CCcccEEEeCCC------hhhHHHhhccccCCCEEEEEecc
Q 019790          216 GKGVDVILDCMG------ASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       216 ~~~~d~vid~~g------~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      +..||+|+.+..      ...+..+.+.|+++|+++.....
T Consensus       114 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~  154 (227)
T 3e8s_A          114 GKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH  154 (227)
T ss_dssp             CCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence            345999987432      13467788999999999876543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=93.47  E-value=0.24  Score=42.52  Aligned_cols=90  Identities=14%  Similarity=0.111  Sum_probs=61.7

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|||          +|+ |.+|..++..+...|.+|++++|++.+...+...+...+. .+-.++.        -.++|
T Consensus         6 ~~ilV----------tGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~D~~d~~--------~~~~d   65 (286)
T 3ius_A            6 GTLLS----------FGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLL-WPGEEPS--------LDGVT   65 (286)
T ss_dssp             CEEEE----------ETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEE-SSSSCCC--------CTTCC
T ss_pred             CcEEE----------ECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEE-ecccccc--------cCCCC
Confidence            47999          997 9999999999999999999999999888777665544332 2212211        24799


Q ss_pred             EEEeCCChh-----hHHHhhcccc----CCCEEEEEecc
Q 019790          221 VILDCMGAS-----YFQRNLGSLN----IDGRLFIIGTQ  250 (335)
Q Consensus       221 ~vid~~g~~-----~~~~~~~~l~----~~G~~v~~g~~  250 (335)
                      +||.+++..     .....++.++    .-.+++.++..
T Consensus        66 ~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           66 HLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             EEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             EEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence            999998742     1233333332    23688877653

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=93.46  E-value=0.23  Score=43.11  Aligned_cols=74  Identities=22%  Similarity=0.303  Sum_probs=50.0

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh------hhHHHHH---HcCCCEE-EeCCCccHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCK---DLGADVC-INYKTEDFVARV  210 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~------~~~~~~~---~~g~~~~-~~~~~~~~~~~~  210 (335)
                      .+|||          .|++|.+|..++..+...|.+|++++|+.      ++.+.++   ..+...+ .|..+   .+.+
T Consensus         5 ~~ilV----------tGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~l   71 (308)
T 1qyc_A            5 SRILL----------IGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDD---HASL   71 (308)
T ss_dssp             CCEEE----------ESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTC---HHHH
T ss_pred             CEEEE----------EcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCC---HHHH
Confidence            56899          99999999999999999999999999873      3333232   3344322 13222   2334


Q ss_pred             HHHhCCCcccEEEeCCChh
Q 019790          211 KEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~  229 (335)
                      .+...  ++|+||.+++..
T Consensus        72 ~~~~~--~~d~vi~~a~~~   88 (308)
T 1qyc_A           72 VEAVK--NVDVVISTVGSL   88 (308)
T ss_dssp             HHHHH--TCSEEEECCCGG
T ss_pred             HHHHc--CCCEEEECCcch
Confidence            44432  589999999863

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=93.45  E-value=0.19  Score=45.83  Aligned_cols=89  Identities=11%  Similarity=-0.031  Sum_probs=63.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          +| .|.+|..+++.++..|++|++.+++....+...+.|....     .++    .+..  ..
T Consensus       190 ~gktvGI----------IG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l----~ell--~~  247 (393)
T 2nac_A          190 EAMHVGT----------VA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATR----EDMY--PV  247 (393)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSH----HHHG--GG
T ss_pred             CCCEEEE----------Ee-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CCH----HHHH--hc
Confidence            5678888          77 8999999999999999999999987665565666665321     112    2222  24


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+.++....     + ...+..|+++..++.++.
T Consensus       248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR  284 (393)
T 2nac_A          248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTAR  284 (393)
T ss_dssp             CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence            799998887421     2 456677888877777764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=93.42  E-value=0.57  Score=39.05  Aligned_cols=93  Identities=18%  Similarity=0.130  Sum_probs=56.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .+.+|||          .| .|.+|...+..+...|++|++++.... ..+.+.+.+.-..+. ....  .   +.+  .
T Consensus        30 ~gk~VLV----------VG-gG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~-~~~~--~---~dL--~   90 (223)
T 3dfz_A           30 KGRSVLV----------VG-GGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKR-KKVG--E---EDL--L   90 (223)
T ss_dssp             TTCCEEE----------EC-CSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEEC-SCCC--G---GGS--S
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEE-CCCC--H---hHh--C
Confidence            4667888          77 699999999999999999999986432 233333333222221 1111  0   011  3


Q ss_pred             cccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          218 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       218 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ++|+||-+++....+..+...+..|..+-....
T Consensus        91 ~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~  123 (223)
T 3dfz_A           91 NVFFIVVATNDQAVNKFVKQHIKNDQLVNMASS  123 (223)
T ss_dssp             SCSEEEECCCCTHHHHHHHHHSCTTCEEEC---
T ss_pred             CCCEEEECCCCHHHHHHHHHHHhCCCEEEEeCC
Confidence            699999999987765544444447777655433

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=93.40  E-value=0.23  Score=46.26  Aligned_cols=79  Identities=24%  Similarity=0.400  Sum_probs=51.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--H-HHHHHcCCCEE-EeCCCccHHH----HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--L-AVCKDLGADVC-INYKTEDFVA----RV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~-~~~~~~g~~~~-~~~~~~~~~~----~~  210 (335)
                      ++.++||          +||++++|.+++..+-..|++|+++.+++..  . +...+.+...+ .|-.+....+    .+
T Consensus       212 ~gk~~LV----------TGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~  281 (454)
T 3u0b_A          212 DGKVAVV----------TGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHV  281 (454)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCEEEE----------eCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHH
Confidence            4678999          9999999999999888889999999876432  2 22234454322 2333333222    22


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+.. +.++|++|+++|.
T Consensus       282 ~~~~-g~~id~lV~nAGv  298 (454)
T 3u0b_A          282 TEHH-GGKVDILVNNAGI  298 (454)
T ss_dssp             HHHS-TTCCSEEEECCCC
T ss_pred             HHHc-CCCceEEEECCcc
Confidence            2222 2249999999873

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=93.39  E-value=0.64  Score=40.99  Aligned_cols=87  Identities=15%  Similarity=0.181  Sum_probs=59.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      ..+|.|          +| .|.+|...++.+...|.+|++.++++++.+.+.+.|....     .+..+    ..  ...
T Consensus        31 ~~~I~i----------IG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~e----~~--~~a   88 (320)
T 4dll_A           31 ARKITF----------LG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH-----EQARA----AA--RDA   88 (320)
T ss_dssp             CSEEEE----------EC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE-----SSHHH----HH--TTC
T ss_pred             CCEEEE----------EC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee-----CCHHH----HH--hcC
Confidence            457888          77 8999999999999999999999999999888877765322     11112    11  247


Q ss_pred             cEEEeCCChh-hHHHhh------ccccCCCEEEEEe
Q 019790          220 DVILDCMGAS-YFQRNL------GSLNIDGRLFIIG  248 (335)
Q Consensus       220 d~vid~~g~~-~~~~~~------~~l~~~G~~v~~g  248 (335)
                      |+||-|+... .....+      ..++++..++.++
T Consensus        89 DvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~s  124 (320)
T 4dll_A           89 DIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMA  124 (320)
T ss_dssp             SEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred             CEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence            8888888853 333333      2455555555543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=93.34  E-value=0.22  Score=44.57  Aligned_cols=37  Identities=16%  Similarity=0.177  Sum_probs=32.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhh--CCCeEEEEecChh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC--QGVRVFVTAGSEE  185 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~--~g~~V~~~~~~~~  185 (335)
                      .+.+|||          +||+|.+|..++..+..  .|++|++++++..
T Consensus         9 ~~~~vlV----------TGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILI----------TGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence            4678999          99999999999999888  8999999998654

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=93.34  E-value=0.21  Score=45.36  Aligned_cols=38  Identities=16%  Similarity=0.091  Sum_probs=31.2

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ...+.+|||          +||+|-+|..++..+...|++|+++++..
T Consensus         8 ~~~~~~vlV----------TG~tGfIG~~l~~~L~~~G~~V~~~~r~~   45 (404)
T 1i24_A            8 HHHGSRVMV----------IGGDGYCGWATALHLSKKNYEVCIVDNLV   45 (404)
T ss_dssp             ----CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred             ccCCCeEEE----------eCCCcHHHHHHHHHHHhCCCeEEEEEecC
Confidence            467789999          99999999999998888899999998754

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=93.31  E-value=0.028  Score=48.43  Aligned_cols=93  Identities=14%  Similarity=0.264  Sum_probs=61.8

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhC---CCeEEEEecChhhHHHHHH----cCCC---EEEeCCCccH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ---GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDF  206 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~---g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~  206 (335)
                      +++|.+||-          .|  ++.|..+..+++..   |++|++++.+++..+.+++    .+..   ..+..+-.. 
T Consensus        68 ~~~~~~vLD----------lG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~-  134 (261)
T 4gek_A           68 VQPGTQVYD----------LG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD-  134 (261)
T ss_dssp             CCTTCEEEE----------ET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT-
T ss_pred             CCCCCEEEE----------Ee--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc-
Confidence            689999998          77  55677777788764   7899999999998887764    2321   122221111 


Q ss_pred             HHHHHHHhCCCcccEEEeCCC-----h----hhHHHhhccccCCCEEEEEec
Q 019790          207 VARVKEETGGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~  249 (335)
                             .....+|+|+-+..     .    ..+..+.+.|+|||+++....
T Consensus       135 -------~~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          135 -------IAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             -------CCCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             -------ccccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence                   12236888876432     1    125678899999999987643

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=93.26  E-value=0.11  Score=42.77  Aligned_cols=92  Identities=16%  Similarity=0.149  Sum_probs=60.6

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC--CEEEeCCCccHHHHHHHHh
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCINYKTEDFVARVKEET  214 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~  214 (335)
                      ..++.+||-          .|  ++.|..+..+++. |+++++++.+++..+.+++...  -..+..+...+.      .
T Consensus        43 ~~~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~------~  103 (220)
T 3hnr_A           43 NKSFGNVLE----------FG--VGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFE------V  103 (220)
T ss_dssp             HTCCSEEEE----------EC--CTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCC------C
T ss_pred             ccCCCeEEE----------eC--CCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcC------C
Confidence            347788888          76  3457777777776 8899999999998888876422  112222221110      1


Q ss_pred             CCCcccEEEeCCC-----hh----hHHHhhccccCCCEEEEEe
Q 019790          215 GGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       215 ~~~~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~g  248 (335)
                      . ..||+|+-...     ..    .+..+.+.|+++|.++...
T Consensus       104 ~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          104 P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            1 47999987532     21    4567788999999998764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=93.20  E-value=0.11  Score=43.64  Aligned_cols=75  Identities=15%  Similarity=0.228  Sum_probs=49.7

Q ss_pred             CCCEEEEeeccccccccccc----------------cchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCC
Q 019790          139 PGESFLVDFCSISYSDVHGG----------------SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK  202 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~----------------~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~  202 (335)
                      .|.++||          +||                +|.+|.++++.+...|++|+++.++.. .+.  ..+. .+++-.
T Consensus         7 ~gk~vlV----------TgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~--~~g~-~~~dv~   72 (226)
T 1u7z_A            7 KHLNIMI----------TAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT--PPFV-KRVDVM   72 (226)
T ss_dssp             TTCEEEE----------EESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC--CTTE-EEEECC
T ss_pred             CCCEEEE----------ECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc--CCCC-eEEccC
Confidence            5788999          887                589999999999999999999876531 110  1122 234433


Q ss_pred             C-ccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          203 T-EDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       203 ~-~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      + ....+.+.+..+  ++|+++.|++-.
T Consensus        73 ~~~~~~~~v~~~~~--~~Dili~~Aav~   98 (226)
T 1u7z_A           73 TALEMEAAVNASVQ--QQNIFIGCAAVA   98 (226)
T ss_dssp             SHHHHHHHHHHHGG--GCSEEEECCBCC
T ss_pred             cHHHHHHHHHHhcC--CCCEEEECCccc
Confidence            3 223344444433  589999998853

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=93.19  E-value=0.45  Score=40.57  Aligned_cols=104  Identities=12%  Similarity=0.042  Sum_probs=62.6

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCC----------CEEEeC
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA----------DVCINY  201 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~----------~~~~~~  201 (335)
                      ......++.+||-          .|  .+.|..+..+++.. +.+|++++.+++..+.+++.-.          -.++..
T Consensus        30 ~~~~~~~~~~VLD----------lG--~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~   97 (260)
T 2ozv_A           30 SLVADDRACRIAD----------LG--AGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEA   97 (260)
T ss_dssp             HTCCCCSCEEEEE----------CC--SSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEEC
T ss_pred             HHhcccCCCEEEE----------eC--ChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeC
Confidence            3455667778777          65  33455555666665 5699999999998888764221          123333


Q ss_pred             CCccHH-HHHHHHhCCCcccEEEeCCC------------------------h-hhHHHhhccccCCCEEEEEe
Q 019790          202 KTEDFV-ARVKEETGGKGVDVILDCMG------------------------A-SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       202 ~~~~~~-~~~~~~~~~~~~d~vid~~g------------------------~-~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +-..+. ....+......||+|+-+-.                        - ..+..+.+.|+++|+++++-
T Consensus        98 D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  170 (260)
T 2ozv_A           98 DVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS  170 (260)
T ss_dssp             CTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            333331 11111223457999987511                        1 12456778899999998764

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=93.15  E-value=0.3  Score=42.38  Aligned_cols=87  Identities=16%  Similarity=0.166  Sum_probs=56.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      -.+.+++|          +| +|++|.+++..+...|+ +|+++.|+.++.+.+.+. . ....     + +.+.+ .  
T Consensus       120 ~~~k~vlv----------lG-aGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~-~-~~~~-----~-~~l~~-l--  177 (282)
T 3fbt_A          120 IKNNICVV----------LG-SGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE-F-KVIS-----Y-DELSN-L--  177 (282)
T ss_dssp             CTTSEEEE----------EC-SSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT-S-EEEE-----H-HHHTT-C--
T ss_pred             ccCCEEEE----------EC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-c-Cccc-----H-HHHHh-c--
Confidence            35778999          88 68999999999999998 999999999877665431 1 1121     2 22322 2  


Q ss_pred             CcccEEEeCCChhhH------HHhhccccCCCEEEEE
Q 019790          217 KGVDVILDCMGASYF------QRNLGSLNIDGRLFII  247 (335)
Q Consensus       217 ~~~d~vid~~g~~~~------~~~~~~l~~~G~~v~~  247 (335)
                       .+|+||+|++....      ......++++..++.+
T Consensus       178 -~~DivInaTp~Gm~~~~~~~pi~~~~l~~~~~v~Dl  213 (282)
T 3fbt_A          178 -KGDVIINCTPKGMYPKEGESPVDKEVVAKFSSAVDL  213 (282)
T ss_dssp             -CCSEEEECSSTTSTTSTTCCSSCHHHHTTCSEEEES
T ss_pred             -cCCEEEECCccCccCCCccCCCCHHHcCCCCEEEEE
Confidence             58999999864211      1123445666655554

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=93.13  E-value=0.14  Score=41.96  Aligned_cols=93  Identities=22%  Similarity=0.161  Sum_probs=62.4

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc-CCCEEEeCCCccHHHHHHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEE  213 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~  213 (335)
                      ..+.++.+||-          .|  ++.|..+..+++. |++|++++.+++..+.+++. +..... .+-..       .
T Consensus        39 ~~~~~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~d~~~-------~   97 (211)
T 3e23_A           39 GELPAGAKILE----------LG--CGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVRT-MLFHQ-------L   97 (211)
T ss_dssp             TTSCTTCEEEE----------SS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEE-CCGGG-------C
T ss_pred             HhcCCCCcEEE----------EC--CCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceEE-eeecc-------C
Confidence            45677888888          77  3457777777766 88999999999988888754 433221 11111       1


Q ss_pred             hCCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEe
Q 019790          214 TGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       214 ~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .....||+|+....-         ..+..+.+.|+++|+++..-
T Consensus        98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A           98 DAIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             CCCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            124579999865321         23467788999999998763

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=93.10  E-value=0.3  Score=43.44  Aligned_cols=88  Identities=14%  Similarity=0.124  Sum_probs=60.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|...++.++..|.+|++.+++.++.+.+.+.+....      ++.+.+.      .
T Consensus       154 ~g~~vgI----------IG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l~------~  210 (330)
T 2gcg_A          154 TQSTVGI----------IG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELAA------Q  210 (330)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHHH------H
T ss_pred             CCCEEEE----------EC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHHh------h
Confidence            3568888          87 7999999999999999999999987765555555554221      2222221      4


Q ss_pred             ccEEEeCCChhh-----H-HHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY-----F-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~-----~-~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+.+++...     + ...+..++++..++.++.
T Consensus       211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred             CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            799999887531     1 345667787777766543

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=93.06  E-value=0.63  Score=40.81  Aligned_cols=86  Identities=14%  Similarity=0.055  Sum_probs=58.9

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|.|          +| .|.+|...+..+...|.+|++.++++++.+.+.+.|.. +.    .+..+.+      ...|
T Consensus        31 ~~I~i----------IG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~----~~~~~~~------~~~D   88 (316)
T 2uyy_A           31 KKIGF----------LG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR-LG----RTPAEVV------STCD   88 (316)
T ss_dssp             SCEEE----------EC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCE-EC----SCHHHHH------HHCS
T ss_pred             CeEEE----------Ec-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCE-Ec----CCHHHHH------hcCC
Confidence            56888          77 79999999988888899999999999888877776642 11    1222222      1479


Q ss_pred             EEEeCCC-hhhHHHhh-------ccccCCCEEEEEe
Q 019790          221 VILDCMG-ASYFQRNL-------GSLNIDGRLFIIG  248 (335)
Q Consensus       221 ~vid~~g-~~~~~~~~-------~~l~~~G~~v~~g  248 (335)
                      +||.|+. .......+       ..+.++..++.++
T Consensus        89 vVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s  124 (316)
T 2uyy_A           89 ITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMS  124 (316)
T ss_dssp             EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             EEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECC
Confidence            9999998 44444433       3455555566554

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=93.03  E-value=0.22  Score=43.67  Aligned_cols=90  Identities=13%  Similarity=0.279  Sum_probs=57.9

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh------hhHHHH---HHcCCCEE-EeCCCccHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVC---KDLGADVC-INYKTEDFVARV  210 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~------~~~~~~---~~~g~~~~-~~~~~~~~~~~~  210 (335)
                      .+|||          .|++|.+|..+++.+...|.+|++++|+.      ++.+.+   ...+...+ .|..+   .+.+
T Consensus         5 ~~ilV----------tGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d---~~~l   71 (321)
T 3c1o_A            5 EKIII----------YGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEE---HEKM   71 (321)
T ss_dssp             CCEEE----------ETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTC---HHHH
T ss_pred             cEEEE----------EcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCC---HHHH
Confidence            46899          99999999999999998999999999875      233332   23344332 23332   2345


Q ss_pred             HHHhCCCcccEEEeCCChhh---HHHhhccccCC---CEEE
Q 019790          211 KEETGGKGVDVILDCMGASY---FQRNLGSLNID---GRLF  245 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~~---~~~~~~~l~~~---G~~v  245 (335)
                      .+...  ++|+||.+++...   ....++.+...   ++++
T Consensus        72 ~~a~~--~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           72 VSVLK--QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             HHHHT--TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             HHHHc--CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence            55543  5899999998532   23334444332   4666

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=93.03  E-value=0.13  Score=42.77  Aligned_cols=96  Identities=20%  Similarity=0.206  Sum_probs=64.2

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHhC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~  215 (335)
                      +.++.+||-          .|  ++.|..+..+++. |++|++++.++...+.+++... -.++..+....   + ....
T Consensus        46 ~~~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~---~-~~~~  108 (226)
T 3m33_A           46 LTPQTRVLE----------AG--CGHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGE---L-PAGL  108 (226)
T ss_dssp             CCTTCEEEE----------ES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSS---C-CTTC
T ss_pred             CCCCCeEEE----------eC--CCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhc---c-CCcC
Confidence            367788888          76  4457788888887 8899999999998888876532 22222222110   0 0110


Q ss_pred             CCcccEEEeCCCh-hhHHHhhccccCCCEEEEEec
Q 019790          216 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       216 ~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      ...||+|+..... ..+..+.+.|+++|+++..+.
T Consensus       109 ~~~fD~v~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (226)
T 3m33_A          109 GAPFGLIVSRRGPTSVILRLPELAAPDAHFLYVGP  143 (226)
T ss_dssp             CCCEEEEEEESCCSGGGGGHHHHEEEEEEEEEEES
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHcCCCcEEEEeCC
Confidence            3479999987543 346778899999999995543

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=93.00  E-value=0.31  Score=40.26  Aligned_cols=95  Identities=12%  Similarity=0.131  Sum_probs=61.9

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-----------EEEeCCCcc
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-----------VCINYKTED  205 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-----------~~~~~~~~~  205 (335)
                      +.++.+||-          .|  ++.|..+..+++. |++|++++.++...+.+++....           ..+..+...
T Consensus        28 ~~~~~~vLd----------iG--~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~   94 (235)
T 3sm3_A           28 LQEDDEILD----------IG--CGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS   94 (235)
T ss_dssp             CCTTCEEEE----------ET--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS
T ss_pred             CCCCCeEEE----------EC--CCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc
Confidence            457888888          77  3347777777777 88999999999988888753211           122222111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC-----h-----hhHHHhhccccCCCEEEEEecc
Q 019790          206 FVARVKEETGGKGVDVILDCMG-----A-----SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g-----~-----~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      +      ......||+|+-...     .     ..+..+.+.|+++|+++.....
T Consensus        95 ~------~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  143 (235)
T 3sm3_A           95 L------SFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFG  143 (235)
T ss_dssp             C------CSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             c------CCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence            1      012347999986332     1     2356778899999999877543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=92.98  E-value=0.43  Score=42.09  Aligned_cols=74  Identities=18%  Similarity=0.218  Sum_probs=46.5

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh--hh---HHHHHHcCCCEEE--eCCCccHHHHHHHHh
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EK---LAVCKDLGADVCI--NYKTEDFVARVKEET  214 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~--~~---~~~~~~~g~~~~~--~~~~~~~~~~~~~~~  214 (335)
                      +|||          +||+|.+|..+++.+...|++|++++++.  ..   .+.+...+.-..+  |..+.   +.+.+..
T Consensus         3 ~vlV----------TGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~---~~~~~~~   69 (347)
T 1orr_A            3 KLLI----------TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLI   69 (347)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHH
T ss_pred             EEEE----------eCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCH---HHHHHHH
Confidence            6889          99999999999999998999999998632  11   2223222322223  33232   2222222


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                      .+.++|+||.+++.
T Consensus        70 ~~~~~d~vih~A~~   83 (347)
T 1orr_A           70 TKYMPDSCFHLAGQ   83 (347)
T ss_dssp             HHHCCSEEEECCCC
T ss_pred             hccCCCEEEECCcc
Confidence            21258999999873

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=92.98  E-value=0.34  Score=41.07  Aligned_cols=73  Identities=16%  Similarity=0.254  Sum_probs=47.5

Q ss_pred             ccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          156 HGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .|++|.+|...++.+... +.+++.........+.+....++.++|.+.........+..-..+.++|+-++|-
T Consensus         6 ~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            6 LGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            887899999999998866 8898877654333333333456777777665544333333233467778877764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=92.98  E-value=0.86  Score=39.94  Aligned_cols=86  Identities=14%  Similarity=0.045  Sum_probs=59.0

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      .+|.|          +| .|.+|...+..+...|.+|++.++++++.+.+.+.|....     .+..+.+.      ..|
T Consensus        22 ~~I~i----------IG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~-----~~~~~~~~------~aD   79 (310)
T 3doj_A           22 MEVGF----------LG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVC-----ESPAEVIK------KCK   79 (310)
T ss_dssp             CEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEEC-----SSHHHHHH------HCS
T ss_pred             CEEEE----------EC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEc-----CCHHHHHH------hCC
Confidence            47888          77 8999999999999999999999999999888887775321     12222221      368


Q ss_pred             EEEeCCChh-hHHHhh-------ccccCCCEEEEEe
Q 019790          221 VILDCMGAS-YFQRNL-------GSLNIDGRLFIIG  248 (335)
Q Consensus       221 ~vid~~g~~-~~~~~~-------~~l~~~G~~v~~g  248 (335)
                      +||-|++.. .....+       ..++++..++.++
T Consensus        80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence            899888753 333333       3445555555543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=92.95  E-value=0.074  Score=44.73  Aligned_cols=66  Identities=11%  Similarity=0.157  Sum_probs=42.3

Q ss_pred             cchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCCh
Q 019790          159 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       159 ~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +|.+|.+.++.+...|++|+.+.++....... ..+. .+++... ....+.+.+..  .++|++|.|++-
T Consensus        28 SG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~-~~~~-~~~~v~s~~em~~~v~~~~--~~~Dili~aAAv   94 (232)
T 2gk4_A           28 TGHLGKIITETLLSAGYEVCLITTKRALKPEP-HPNL-SIREITNTKDLLIEMQERV--QDYQVLIHSMAV   94 (232)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC-CTTE-EEEECCSHHHHHHHHHHHG--GGCSEEEECSBC
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCCccccccC-CCCe-EEEEHhHHHHHHHHHHHhc--CCCCEEEEcCcc
Confidence            78899999999999999999999764311100 0122 2333332 22344455544  368999998874

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=92.93  E-value=0.43  Score=42.59  Aligned_cols=86  Identities=16%  Similarity=0.096  Sum_probs=57.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +| .|.+|.+.+..++..|.+|++.++++++.+.+.+.|....     .+..+.+.+..  ...|+||-|+....+...+
T Consensus        14 IG-~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~-----~~~~e~~~~a~--~~aDlVilavP~~~~~~vl   85 (341)
T 3ktd_A           14 LG-LGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVS-----ADLEATLQRAA--AEDALIVLAVPMTAIDSLL   85 (341)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEE-----SCHHHHHHHHH--HTTCEEEECSCHHHHHHHH
T ss_pred             Ee-ecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeee-----CCHHHHHHhcc--cCCCEEEEeCCHHHHHHHH
Confidence            77 8999999999999999999999999999988888887432     12222222211  1368999888875443332


Q ss_pred             c---cccCCCEEEEEec
Q 019790          236 G---SLNIDGRLFIIGT  249 (335)
Q Consensus       236 ~---~l~~~G~~v~~g~  249 (335)
                      .   .++++..++.++.
T Consensus        86 ~~l~~~~~~~iv~Dv~S  102 (341)
T 3ktd_A           86 DAVHTHAPNNGFTDVVS  102 (341)
T ss_dssp             HHHHHHCTTCCEEECCS
T ss_pred             HHHHccCCCCEEEEcCC
Confidence            2   2344444444543

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=92.93  E-value=0.22  Score=41.64  Aligned_cols=96  Identities=16%  Similarity=0.172  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCC---EEEeCCCccHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFV  207 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~  207 (335)
                      ...++.+||-          .|  ++.|..+..+++.. +.+|+.++.+++..+.+++    .+..   .++..+.... 
T Consensus        68 ~~~~~~~vLD----------iG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-  134 (232)
T 3ntv_A           68 RMNNVKNILE----------IG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ-  134 (232)
T ss_dssp             HHHTCCEEEE----------EC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-
T ss_pred             hhcCCCEEEE----------Ee--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH-
Confidence            3456778887          76  45677777888854 6799999999988777754    3421   2232222221 


Q ss_pred             HHHHHHhCCCcccEEEeCCCh----hhHHHhhccccCCCEEEEE
Q 019790          208 ARVKEETGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~  247 (335)
                        +.+.. ...||+||-....    ..+..+.+.|+++|.++.-
T Consensus       135 --~~~~~-~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          135 --FENVN-DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             --HHHHT-TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             --HHhhc-cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence              12011 2479999854432    2356788999999998763

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=92.89  E-value=0.11  Score=45.01  Aligned_cols=89  Identities=12%  Similarity=0.042  Sum_probs=55.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      .+.+++|          +| +|++|.+++..+...|+ +|++..|+.++.+.+.+ .. ...     .+ +.+.+..  .
T Consensus       116 ~~k~vlv----------lG-aGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~-----~~-~~~~~~~--~  174 (277)
T 3don_A          116 EDAYILI----------LG-AGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI-----NL-SHAESHL--D  174 (277)
T ss_dssp             GGCCEEE----------EC-CSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE-----CH-HHHHHTG--G
T ss_pred             CCCEEEE----------EC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc-----cH-hhHHHHh--c
Confidence            4678888          88 69999999999999999 89999999877554332 11 111     12 2333322  3


Q ss_pred             cccEEEeCCChhhHHH-----hhccccCCCEEEEEe
Q 019790          218 GVDVILDCMGASYFQR-----NLGSLNIDGRLFIIG  248 (335)
Q Consensus       218 ~~d~vid~~g~~~~~~-----~~~~l~~~G~~v~~g  248 (335)
                      .+|+||+|++......     -...++++..++.+.
T Consensus       175 ~aDiVInaTp~Gm~~~~~~~l~~~~l~~~~~V~D~v  210 (277)
T 3don_A          175 EFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIV  210 (277)
T ss_dssp             GCSEEEECCC-------CCSSCCTTCCSSCEEEESC
T ss_pred             CCCEEEECccCCCCCCCcCCCCHHHcCCCCEEEEec
Confidence            5899999987542211     134466666666553

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=92.88  E-value=0.29  Score=43.22  Aligned_cols=73  Identities=23%  Similarity=0.332  Sum_probs=45.6

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC----hhhHHHHHHc-CC-CEEE--eCCCccHHHHHHHH
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKLAVCKDL-GA-DVCI--NYKTEDFVARVKEE  213 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~----~~~~~~~~~~-g~-~~~~--~~~~~~~~~~~~~~  213 (335)
                      ++||          +||+|.+|..+++.+...|++|+++.+.    ++..+.+... +. -..+  |..+..   .+.+.
T Consensus         2 ~vlV----------TGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~   68 (338)
T 1udb_A            2 RVLV----------TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA---LMTEI   68 (338)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHH---HHHHH
T ss_pred             EEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHH---HHHHH
Confidence            5888          9999999999999998899999998753    2223333322 21 1222  333322   22222


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      ..+.++|+||.+++
T Consensus        69 ~~~~~~D~vih~A~   82 (338)
T 1udb_A           69 LHDHAIDTVIHFAG   82 (338)
T ss_dssp             HHHTTCSEEEECCS
T ss_pred             hhccCCCEEEECCc
Confidence            22125899999987

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=92.88  E-value=0.17  Score=43.86  Aligned_cols=93  Identities=23%  Similarity=0.273  Sum_probs=60.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHcC--------------CCEEEeCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLG--------------ADVCINYK  202 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~  202 (335)
                      .++.+||.          .|  ++.|..+..+++. +. +|++++.+++..+.+++.-              ...+ ...
T Consensus        74 ~~~~~VLd----------iG--~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v-~~~  139 (281)
T 1mjf_A           74 PKPKRVLV----------IG--GGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKA-KLT  139 (281)
T ss_dssp             SCCCEEEE----------EE--CTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSE-EEE
T ss_pred             CCCCeEEE----------Ec--CCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcE-EEE
Confidence            45678988          77  4457777788887 64 9999999999888877531              1111 111


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCC-----------hhhHHHhhccccCCCEEEEE
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMG-----------ASYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~  247 (335)
                      ..+..+.+..   ...||+|+-...           .+.+..+.+.|+++|.++..
T Consensus       140 ~~D~~~~l~~---~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          140 IGDGFEFIKN---NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             ESCHHHHHHH---CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             ECchHHHhcc---cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            1232233333   347999985332           12356778999999999875

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=92.88  E-value=0.069  Score=42.10  Aligned_cols=93  Identities=17%  Similarity=0.147  Sum_probs=62.9

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEEeCCCccHHHHHHHHh
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEET  214 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~  214 (335)
                      .+.++.+||-          .|  ++.|..+..+++... ++++++.+++..+.+++.... ..+..+         ...
T Consensus        14 ~~~~~~~vLD----------iG--~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d---------~~~   71 (170)
T 3i9f_A           14 FEGKKGVIVD----------YG--CGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP---------KEI   71 (170)
T ss_dssp             HSSCCEEEEE----------ET--CTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG---------GGS
T ss_pred             CcCCCCeEEE----------EC--CCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC---------CCC
Confidence            4577888888          77  334777788887764 999999999988888765222 222211         112


Q ss_pred             CCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEecc
Q 019790          215 GGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       215 ~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ....||+|+.+..-       ..+..+.+.|+++|+++.....
T Consensus        72 ~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  114 (170)
T 3i9f_A           72 PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWR  114 (170)
T ss_dssp             CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence            23479999864332       2357788999999999887543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=92.87  E-value=0.18  Score=44.07  Aligned_cols=68  Identities=12%  Similarity=0.068  Sum_probs=39.3

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC-ccHHHHHHHHhCCCc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKG  218 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~  218 (335)
                      +.+|||          +|++|.+|..+++.+...|++|++++++....      + ....|..+ ..+.+.+...    +
T Consensus         2 ~~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~-~~~~Dl~d~~~~~~~~~~~----~   60 (315)
T 2ydy_A            2 NRRVLV----------TGATGLLGRAVHKEFQQNNWHAVGCGFRRARP------K-FEQVNLLDSNAVHHIIHDF----Q   60 (315)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------CHHHHHHH----C
T ss_pred             CCeEEE----------ECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC------C-eEEecCCCHHHHHHHHHhh----C
Confidence            457999          99999999999999998999999999765431      1 11122222 1222222222    5


Q ss_pred             ccEEEeCCCh
Q 019790          219 VDVILDCMGA  228 (335)
Q Consensus       219 ~d~vid~~g~  228 (335)
                      +|+||.+++.
T Consensus        61 ~d~vih~A~~   70 (315)
T 2ydy_A           61 PHVIVHCAAE   70 (315)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCcc
Confidence            8999998874

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=92.87  E-value=0.32  Score=39.53  Aligned_cols=67  Identities=19%  Similarity=0.298  Sum_probs=44.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEE--eCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      +|++|.+|..+++.+...  +|+++++++++.+.+.+ ++. ..+  |-.+......+.+.  ..++|++|.++|
T Consensus         6 tGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag   75 (207)
T 2yut_A            6 TGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVG   75 (207)
T ss_dssp             ETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCC
T ss_pred             EcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCC
Confidence            999999999988887776  99999999877766543 333 333  22222211222222  136999999987

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=92.86  E-value=0.11  Score=43.39  Aligned_cols=71  Identities=28%  Similarity=0.353  Sum_probs=46.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCcc-HHHHHHHHhCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTED-FVARVKEETGG  216 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~~~~~~~~~~  216 (335)
                      +.++||          +|++|.+|..+++.+...|++|++++++++ .+   +.   ..+  |-.+.. +.+.+.+....
T Consensus         2 ~k~vlV----------tGasggiG~~la~~l~~~G~~V~~~~r~~~-~~---~~---~~~~~D~~~~~~~~~~~~~~~~~   64 (242)
T 1uay_A            2 ERSALV----------TGGASGLGRAAALALKARGYRVVVLDLRRE-GE---DL---IYVEGDVTREEDVRRAVARAQEE   64 (242)
T ss_dssp             CCEEEE----------ETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS---SS---EEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEE----------eCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc---ce---EEEeCCCCCHHHHHHHHHHHHhh
Confidence            467899          999999999999988888999999998764 11   11   222  333322 22222211011


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                      .++|+++.++|
T Consensus        65 ~~~d~li~~ag   75 (242)
T 1uay_A           65 APLFAVVSAAG   75 (242)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCceEEEEccc
Confidence            26899999886

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=92.86  E-value=0.17  Score=45.74  Aligned_cols=75  Identities=16%  Similarity=0.093  Sum_probs=49.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHH-HHHHcCCCE-EEeCCCccHHHHHHHHhCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGADV-CINYKTEDFVARVKEETGG  216 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~~~~~~  216 (335)
                      +.+|||          +|++|.+|..+++.+...| .+|++++++..... .+.. .... .+..+-.+ .+.+.+... 
T Consensus        32 ~~~ilV----------tGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~-~~~v~~~~~Dl~d-~~~l~~~~~-   98 (377)
T 2q1s_A           32 NTNVMV----------VGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD-HPAVRFSETSITD-DALLASLQD-   98 (377)
T ss_dssp             TCEEEE----------ETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCC-CTTEEEECSCTTC-HHHHHHCCS-
T ss_pred             CCEEEE----------ECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccC-CCceEEEECCCCC-HHHHHHHhh-
Confidence            568999          9999999999999999999 99999998754321 1110 1111 22221122 234444443 


Q ss_pred             CcccEEEeCCCh
Q 019790          217 KGVDVILDCMGA  228 (335)
Q Consensus       217 ~~~d~vid~~g~  228 (335)
                       ++|+||.+++.
T Consensus        99 -~~d~Vih~A~~  109 (377)
T 2q1s_A           99 -EYDYVFHLATY  109 (377)
T ss_dssp             -CCSEEEECCCC
T ss_pred             -CCCEEEECCCc
Confidence             69999998874

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=92.82  E-value=0.35  Score=42.69  Aligned_cols=38  Identities=24%  Similarity=0.232  Sum_probs=32.4

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      .+.+|||          +||+|.+|..++..+...|++|++++++.+.
T Consensus         4 ~~~~vlV----------TGatGfIG~~l~~~L~~~G~~V~~~~r~~~~   41 (337)
T 2c29_D            4 QSETVCV----------TGASGFIGSWLVMRLLERGYTVRATVRDPTN   41 (337)
T ss_dssp             --CEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred             CCCEEEE----------ECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence            4578999          9999999999999888899999999887653

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=92.82  E-value=0.35  Score=43.33  Aligned_cols=90  Identities=11%  Similarity=0.090  Sum_probs=60.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHh-hCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~-~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      -.|.++.|          +| .|.+|...++.++ ..|.+|++.+++.+..+.+.+.|...+     .++.+.+.     
T Consensus       161 l~g~~vgI----------IG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~-----  219 (348)
T 2w2k_A          161 PRGHVLGA----------VG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV-----DSLEELAR-----  219 (348)
T ss_dssp             STTCEEEE----------EC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHHH-----
T ss_pred             CCCCEEEE----------EE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe-----CCHHHHhc-----
Confidence            35678888          87 8999999999999 999999999988766655555564321     12222221     


Q ss_pred             CcccEEEeCCChhh-H-----HHhhccccCCCEEEEEec
Q 019790          217 KGVDVILDCMGASY-F-----QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       217 ~~~d~vid~~g~~~-~-----~~~~~~l~~~G~~v~~g~  249 (335)
                       ..|+|+.|+.... .     ...+..++++..++.++.
T Consensus       220 -~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~sr  257 (348)
T 2w2k_A          220 -RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR  257 (348)
T ss_dssp             -HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred             -cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence             3688888876421 1     234566777766665543

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=92.77  E-value=0.69  Score=40.97  Aligned_cols=87  Identities=22%  Similarity=0.282  Sum_probs=61.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC----------EEEeCCCccHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD----------VCINYKTEDFVAR  209 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~  209 (335)
                      ..+|.|          +| .|.+|.+.+..+...|.+|++.++++++.+.+++.|..          ...+    +    
T Consensus        14 ~~kI~i----------IG-~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~----   74 (335)
T 1z82_A           14 EMRFFV----------LG-AGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATN----D----   74 (335)
T ss_dssp             CCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEES----C----
T ss_pred             CCcEEE----------EC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeC----C----
Confidence            356877          77 89999999888888899999999998888888765521          1111    1    


Q ss_pred             HHHHhCCCcccEEEeCCChhhHHHhhccccC-CCEEEEEe
Q 019790          210 VKEETGGKGVDVILDCMGASYFQRNLGSLNI-DGRLFIIG  248 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~-~G~~v~~g  248 (335)
                      ..+ .  ...|+||-|+....+..++..+.+ +..++.+.
T Consensus        75 ~~~-~--~~aDvVil~vk~~~~~~v~~~l~~~~~~vv~~~  111 (335)
T 1z82_A           75 LEE-I--KKEDILVIAIPVQYIREHLLRLPVKPSMVLNLS  111 (335)
T ss_dssp             GGG-C--CTTEEEEECSCGGGHHHHHTTCSSCCSEEEECC
T ss_pred             HHH-h--cCCCEEEEECCHHHHHHHHHHhCcCCCEEEEEe
Confidence            111 1  358999999998777777776663 44455553

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=92.74  E-value=0.48  Score=42.19  Aligned_cols=86  Identities=16%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+.+|.|          +| .|.+|...++.++..|.+|++.+++.+. +.+.+.|..  .  .  ++.+.+.      .
T Consensus       149 ~g~~vgI----------IG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~--~--~--~l~~~l~------~  204 (334)
T 2dbq_A          149 YGKTIGI----------IG-LGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAE--F--K--PLEDLLR------E  204 (334)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCE--E--C--CHHHHHH------H
T ss_pred             CCCEEEE----------Ec-cCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcc--c--C--CHHHHHh------h
Confidence            4668888          87 8999999999999999999999988776 555556642  1  1  2222221      4


Q ss_pred             ccEEEeCCChhh-H-----HHhhccccCCCEEEEEe
Q 019790          219 VDVILDCMGASY-F-----QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       219 ~d~vid~~g~~~-~-----~~~~~~l~~~G~~v~~g  248 (335)
                      .|+|+.|++... .     ...+..++++..++.++
T Consensus       205 aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          205 SDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred             CCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence            799999887532 1     34566778887777665

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=92.73  E-value=1.3  Score=39.77  Aligned_cols=90  Identities=11%  Similarity=-0.003  Sum_probs=59.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      ..+|.|          +| .|.+|...+..+...|.+|++.++++++.+.+.+.|...     ..+..+.+...   ...
T Consensus        22 ~mkIgi----------IG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-----~~s~~e~~~~a---~~~   82 (358)
T 4e21_A           22 SMQIGM----------IG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAG-----ARSIEEFCAKL---VKP   82 (358)
T ss_dssp             CCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBC-----CSSHHHHHHHS---CSS
T ss_pred             CCEEEE----------EC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEE-----eCCHHHHHhcC---CCC
Confidence            357877          77 899999999999999999999999999888887766421     12222222221   235


Q ss_pred             cEEEeCCChhhHH----HhhccccCCCEEEEEe
Q 019790          220 DVILDCMGASYFQ----RNLGSLNIDGRLFIIG  248 (335)
Q Consensus       220 d~vid~~g~~~~~----~~~~~l~~~G~~v~~g  248 (335)
                      |+||-|+......    .....++++..++..+
T Consensus        83 DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId~s  115 (358)
T 4e21_A           83 RVVWLMVPAAVVDSMLQRMTPLLAANDIVIDGG  115 (358)
T ss_dssp             CEEEECSCGGGHHHHHHHHGGGCCTTCEEEECS
T ss_pred             CEEEEeCCHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence            8888888765433    3344455555555543

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=92.71  E-value=0.12  Score=44.58  Aligned_cols=36  Identities=19%  Similarity=0.168  Sum_probs=31.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      ++..+|||          +||+|.+|..++..+...|++|++++++
T Consensus        10 ~~~~~vlV----------tGatG~iG~~l~~~L~~~g~~V~~~~r~   45 (292)
T 1vl0_A           10 HHHMKILI----------TGANGQLGREIQKQLKGKNVEVIPTDVQ   45 (292)
T ss_dssp             --CEEEEE----------ESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred             cccceEEE----------ECCCChHHHHHHHHHHhCCCeEEeccCc
Confidence            45678999          9999999999999999999999999876

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=92.70  E-value=0.82  Score=38.72  Aligned_cols=80  Identities=14%  Similarity=0.156  Sum_probs=56.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                      +| .|.+|...+..+...|.+|.+.++++++.+.+.+ +|...   .  .+..+.+      ...|+||.|+........
T Consensus         9 iG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~--~~~~~~~------~~~D~Vi~~v~~~~~~~v   76 (259)
T 2ahr_A            9 IG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---A--MSHQDLI------DQVDLVILGIKPQLFETV   76 (259)
T ss_dssp             EC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---C--SSHHHHH------HTCSEEEECSCGGGHHHH
T ss_pred             EC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---e--CCHHHHH------hcCCEEEEEeCcHhHHHH
Confidence            77 8999999998888889999999999888777653 46432   1  1222222      148999999997766677


Q ss_pred             hccccCCCEEEEE
Q 019790          235 LGSLNIDGRLFII  247 (335)
Q Consensus       235 ~~~l~~~G~~v~~  247 (335)
                      +..++++..++..
T Consensus        77 ~~~l~~~~~vv~~   89 (259)
T 2ahr_A           77 LKPLHFKQPIISM   89 (259)
T ss_dssp             HTTSCCCSCEEEC
T ss_pred             HHHhccCCEEEEe
Confidence            7767655544444

>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*

Probab=92.68  E-value=0.31  Score=42.11  Aligned_cols=96  Identities=16%  Similarity=0.075  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----C------CCEEEeCCCcc
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----G------ADVCINYKTED  205 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g------~~~~~~~~~~~  205 (335)
                      ...++.+||-          .|  ++.|..+..+++. |++|++++.++...+.+++.    +      .-.+...+...
T Consensus        54 ~~~~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~  120 (293)
T 3thr_A           54 RQHGCHRVLD----------VA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT  120 (293)
T ss_dssp             HHTTCCEEEE----------TT--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred             cccCCCEEEE----------ec--CCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence            3356778888          76  4457777777776 88999999999988877542    1      11222222222


Q ss_pred             HHHHHHHHhCCCcccEEEeC---C---Ch---------hhHHHhhccccCCCEEEEE
Q 019790          206 FVARVKEETGGKGVDVILDC---M---GA---------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~---~---g~---------~~~~~~~~~l~~~G~~v~~  247 (335)
                      +...   +.....||+|+..   .   ..         ..+..+.+.|+++|.++..
T Consensus       121 ~~~~---~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  174 (293)
T 3thr_A          121 LDKD---VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  174 (293)
T ss_dssp             HHHH---SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             Cccc---cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            2211   1234579999964   1   11         2357788999999999765

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=92.67  E-value=3.2  Score=36.64  Aligned_cols=83  Identities=16%  Similarity=0.206  Sum_probs=53.9

Q ss_pred             ccccchHHHHHHHHHh-hC-CCeEEE-EecChhhHHHH-HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-
Q 019790          156 HGGSSGIGTFAIQMGK-CQ-GVRVFV-TAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-  230 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~-~~-g~~V~~-~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-  230 (335)
                      +| .|.+|...++.++ .. ++++++ .++++++.+.+ +.+|...+++    +    +.+......+|+|+.|++... 
T Consensus        14 iG-~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~----~~~~l~~~~~D~V~i~tp~~~h   84 (346)
T 3cea_A           14 IG-LGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----N----YKDMIDTENIDAIFIVAPTPFH   84 (346)
T ss_dssp             EC-CSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----C----HHHHHTTSCCSEEEECSCGGGH
T ss_pred             Ec-CCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----C----HHHHhcCCCCCEEEEeCChHhH
Confidence            77 7999998887776 44 778665 46677766554 4567654442    2    233343346999999999854 


Q ss_pred             HHHhhccccCCCEEEEEe
Q 019790          231 FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       231 ~~~~~~~l~~~G~~v~~g  248 (335)
                      ...+..+|+. |+-+++.
T Consensus        85 ~~~~~~al~~-G~~v~~e  101 (346)
T 3cea_A           85 PEMTIYAMNA-GLNVFCE  101 (346)
T ss_dssp             HHHHHHHHHT-TCEEEEC
T ss_pred             HHHHHHHHHC-CCEEEEc
Confidence            5566677766 4555554

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=92.67  E-value=0.47  Score=38.64  Aligned_cols=97  Identities=15%  Similarity=0.182  Sum_probs=62.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CC--C-EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~--~-~~~~~~~~~  205 (335)
                      ......++ +||-          .|  ++.|..+..+++..+.++++++.+++..+.+++.    +.  . ..+..+...
T Consensus        38 ~~~~~~~~-~vLd----------iG--~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~  104 (219)
T 3dlc_A           38 NRFGITAG-TCID----------IG--SGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN  104 (219)
T ss_dssp             HHHCCCEE-EEEE----------ET--CTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB
T ss_pred             HhcCCCCC-EEEE----------EC--CCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH
Confidence            44455666 7777          66  3457788888888778999999999888777643    32  1 122222111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +.      .....||+|+-+..-       ..+..+.+.|+++|+++...
T Consensus       105 ~~------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  148 (219)
T 3dlc_A          105 IP------IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGG  148 (219)
T ss_dssp             CS------SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CC------CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence            10      123479999975431       23577889999999998764

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=92.65  E-value=0.48  Score=43.35  Aligned_cols=100  Identities=18%  Similarity=0.153  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      ....+.++.+||-          .|  ++.|..+..+++ .|.+|+.++.+++..+.+++.+.......-.......+..
T Consensus       101 ~~~~~~~~~~VLD----------iG--cG~G~~~~~l~~-~g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~  167 (416)
T 4e2x_A          101 ATELTGPDPFIVE----------IG--CNDGIMLRTIQE-AGVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRR  167 (416)
T ss_dssp             HTTTCSSSCEEEE----------ET--CTTTTTHHHHHH-TTCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHH
T ss_pred             HHhCCCCCCEEEE----------ec--CCCCHHHHHHHH-cCCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhccc
Confidence            4456678888888          77  334666666666 4889999999999999998877655432222222222221


Q ss_pred             HhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEE
Q 019790          213 ETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~  247 (335)
                        ....||+|+-.-.-       ..+..+.+.|+++|+++..
T Consensus       168 --~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~  207 (416)
T 4e2x_A          168 --TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE  207 (416)
T ss_dssp             --HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             --CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence              12479999864431       2357788999999999865

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=92.60  E-value=0.34  Score=39.73  Aligned_cols=100  Identities=18%  Similarity=0.180  Sum_probs=65.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCC--EEEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~  204 (335)
                      ....+.++.+||-          .|  ++.|..+..+++..  ..+|++++.+++..+.+++    .+..  .++..+..
T Consensus        31 ~~~~~~~~~~vLD----------iG--~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~   98 (219)
T 3dh0_A           31 KEFGLKEGMTVLD----------VG--TGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN   98 (219)
T ss_dssp             HHHTCCTTCEEEE----------SS--CTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred             HHhCCCCCCEEEE----------Ee--cCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence            4456788889988          77  33477777788776  4699999999988777754    2321  22222211


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEecc
Q 019790          205 DFVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      .+.      .....||+|+-+..-       ..+..+.+.|+++|+++.....
T Consensus        99 ~~~------~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  145 (219)
T 3dh0_A           99 KIP------LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK  145 (219)
T ss_dssp             BCS------SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             cCC------CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence            110      123469999864432       2357788999999999887543

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=92.59  E-value=0.59  Score=39.62  Aligned_cols=91  Identities=22%  Similarity=0.270  Sum_probs=59.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      ++.+||-          .|  ++.|..+..+++. |++|++++.+++..+.+++......+..+...+.      .....
T Consensus        54 ~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~------~~~~~  114 (260)
T 2avn_A           54 NPCRVLD----------LG--GGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP------FPSGA  114 (260)
T ss_dssp             SCCEEEE----------ET--CTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC------SCTTC
T ss_pred             CCCeEEE----------eC--CCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCC------CCCCC
Confidence            7778888          76  3456677777766 8899999999998888876543223322222110      12346


Q ss_pred             ccEEEeCCCh--------hhHHHhhccccCCCEEEEEe
Q 019790          219 VDVILDCMGA--------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       219 ~d~vid~~g~--------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ||+|+-....        ..+..+.+.|+++|+++...
T Consensus       115 fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  152 (260)
T 2avn_A          115 FEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV  152 (260)
T ss_dssp             EEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence            9999864321        12466788899999998653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	335
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	2e-26
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-26
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	3e-24
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	2e-23
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	8e-23
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	1e-22
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-22
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	4e-22
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	5e-22
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-21
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	3e-21
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	3e-21
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	3e-19
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	6e-19
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-18
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	7e-18
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	9e-17
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	5e-16
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	5e-16
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-15
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	3e-15
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	5e-15
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	8e-15
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-14
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	7e-14
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-13
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	1e-13
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	2e-13
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-13
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	5e-13
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	8e-13
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	9e-13
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-12
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	4e-12
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	6e-12
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	2e-11
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	3e-11
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	6e-11
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-10
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	7e-10
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-09
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	6e-09
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	1e-08
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	2e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	6e-08
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	3e-07
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	3e-07
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	9e-07
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	4e-06
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	8e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-04
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	0.002
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	0.003

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  101 bits (252), Expect = 2e-26
 Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 11/190 (5%)

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV 175
           +AA F     T W ++     LSPGE  L+          H  + G+G  A+ + K  G 
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLI----------HSATGGVGMAAVSIAKMIGA 51

Query: 176 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235
           R++ TAGS+ K  +   LG +   + ++ DF   + E T G GVDV+L+ +     QR +
Sbjct: 52  RIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGV 111

Query: 236 GSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 295
             L   GR   +G +          +  AK  +     L        A    ++ +++  
Sbjct: 112 QILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARY-RQLLQHILQ 170

Query: 296 AIAVGKVKPV 305
            +A GK++ +
Sbjct: 171 HVADGKLEVL 180

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score =   99 bits (248), Expect = 2e-26
 Identities = 29/151 (19%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            +A V+ +  +     +Q +    + + +VL++V  +++N  D L         K     
Sbjct: 4   FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFV 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA------LLGGGGYAEKVAVPAGQVLPVPSGVSL 114
           PG++ +G +  V     R++ GD+V A      +   GGY+E   +    ++P+P G+  
Sbjct: 64  PGIDLAGVV--VSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE- 120

Query: 115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
           + A               +   L  G + + 
Sbjct: 121 RIAQEISLAELPQALKRILRGELR-GRTVVR 150

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 94.6 bits (234), Expect = 3e-24
 Identities = 26/138 (18%), Positives = 58/138 (42%), Gaps = 8/138 (5%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           ++A+++ Q     +  +Q +++ ++ + +V + V  ++LN  D L   G     +     
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMI 60

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGG------GGYAEKVAVPAGQVLPVPSGVSL 114
           PG++ +GT+ +      R+  G +V     G      GG AE+  V    ++ +P G + 
Sbjct: 61  PGIDFAGTVRTSEDP--RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118

Query: 115 KDAAAFPEVACTVWSTVF 132
           K+ +              
Sbjct: 119 KEISLSEAPNFAEAIINN 136

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)

Query: 1   MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP 59
           M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y        
Sbjct: 3   MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPY 62

Query: 60  YPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAA 118
            PG + +G I +VG N S +K GD+V       GGYAE        V  +P  +     +
Sbjct: 63  TPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGS 122

Query: 119 AFPEVACTVWSTVFMTSHLSPGESFLV 145
            +P           +    + G+  L+
Sbjct: 123 QYPLEKVAEAHENIIHGSGATGKMILL 149

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 91.1 bits (225), Expect = 8e-23
 Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 32/173 (18%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+   G+P  L+++EV+ P     +VL+K+EA+ +   D    +G +P        
Sbjct: 6   MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFI 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-----------CALLGGGGY--------------- 94
           PG E  G + +VG  V+R K GD+V           C     G                 
Sbjct: 64  PGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNG 123

Query: 95  --AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
             AE V      V  +P  V         +    +     M +    G   L 
Sbjct: 124 GYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQ--MRAGQIEGRIVLE 174

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 91.2 bits (225), Expect = 1e-22
 Identities = 60/190 (31%), Positives = 86/190 (45%), Gaps = 13/190 (6%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           +S + AAA      TV+  +  T  + P E FL           H  + G+G  A Q  K
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLF----------HAAAGGVGLIACQWAK 50

Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231
             G ++  T G+ +K       GA   INY+ ED V R+KE TGGK V V+ D +G   +
Sbjct: 51  ALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTW 110

Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKR-LTVQAAGLRSRSTENKALIVSEVE 290
           +R+L  L   G +   G   GA T +N+  L  K  L V    L+   T  + L  +E  
Sbjct: 111 ERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL--TEAS 168

Query: 291 KNVWPAIAVG 300
             ++  IA G
Sbjct: 169 NELFSLIASG 178

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 88.3 bits (218), Expect = 3e-22
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 15/145 (10%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ + G P  L+L ++ +P+ ++ EV+++VEA  LN AD L R G+Y         
Sbjct: 1   MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120
           PG+E                 G +  AL+  GG AE+VAVP G +LP+P G  +      
Sbjct: 59  PGMEVV-----------GVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFP 107

Query: 121 PEVACTVWSTVFMTSHLSPGESFLV 145
              A   +  +    H   G+  + 
Sbjct: 108 FAEAEAAFRALLDRGHT--GKVVVR 130

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 89.7 bits (221), Expect = 4e-22
 Identities = 36/199 (18%), Positives = 65/199 (32%), Gaps = 19/199 (9%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           +++   A       T +  +     L+PG+ + +          +GG+S +G +A Q+GK
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFI---------QNGGTSAVGKYASQIGK 51

Query: 172 CQGVRVFVTAGS----EEKLAVCKDLGADVCINYKTEDFVARVKEE-----TGGKGVDVI 222
                           +E +A  K+LGA   I     +               G    + 
Sbjct: 52  LLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLA 111

Query: 223 LDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK 282
           L+C+G          LN +G +   G        +  +    K  T     +      NK
Sbjct: 112 LNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNK 171

Query: 283 ALIVSEVEKNVWPAIAVGK 301
            L  S + + +      GK
Sbjct: 172 ELKTSTLNQ-IIAWYEEGK 189

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 88.5 bits (218), Expect = 5e-22
 Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 3/146 (2%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP 61
             I   + G PEVLQ  E       ++E+ ++ +A  +N  DT  R G YPPP   S   
Sbjct: 2   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLG 61

Query: 62  GLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK--DAAA 119
                                  V A    G Y+    + A +   +P+ + +   +   
Sbjct: 62  TEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQK 121

Query: 120 FPEVACTVWSTVFMTSHLSPGESFLV 145
           +P         +   S  + G S L+
Sbjct: 122 YPLKDAQRAHEIL-ESRATQGSSLLI 146

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 2e-21
 Identities = 34/193 (17%), Positives = 57/193 (29%), Gaps = 51/193 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  + G P  L ++E+E    K  EV IK+ ATA+   D     G+ P        
Sbjct: 7   CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV-I 63

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCAL-------------------------------- 88
            G   +G + SVG+ V++ K GD V  L                                
Sbjct: 64  LGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123

Query: 89  ----------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
                           +G   ++E   V    V  +   + + +          +     
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE 183

Query: 133 MTSHLSPGESFLV 145
           +        + + 
Sbjct: 184 LMHSGKSIRTVVK 196

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 86.5 bits (213), Expect = 3e-21
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 15/166 (9%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            +A+   +      + ++ +    +  D VLIKV  + +N  D L  K      +     
Sbjct: 4   FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLI 63

Query: 61  PGLECSGTILSVGKNVSR----WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKD 116
            G++ +GT++S                    +   GG +E  +VP   ++P+P  +SLK+
Sbjct: 64  LGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKE 123

Query: 117 AAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGI 162
           A     +                 +  L           +     +
Sbjct: 124 AMVDQLLTIVDREVSLEE-TPGALKDIL----------QNRIQGRV 158

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 87.7 bits (216), Expect = 3e-21
 Identities = 33/193 (17%), Positives = 57/193 (29%), Gaps = 51/193 (26%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V  +   P  L ++E+E      +E+ IK+ AT +   D L          G    
Sbjct: 9   CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTD-LYHLFEGKHKDGFPVV 65

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA--------------------------------- 87
            G E +G + SVG  V+ ++ G++V                                   
Sbjct: 66  LGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMS 125

Query: 88  ---------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
                           LG   +++   V    V  +   V L +         +V   + 
Sbjct: 126 PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAID 185

Query: 133 MTSHLSPGESFLV 145
           +  H     + L 
Sbjct: 186 LMKHGKCIRTVLS 198

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.2 bits (202), Expect = 3e-19
 Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 38/181 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            + I I      +  +  + +     D ++ IK+EA  +  +D     G +   K     
Sbjct: 7   FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK-MPLV 65

Query: 61  PGLECSGTILSVG-KNVSRWKVGDQVCA-------------------------------- 87
            G E  G ++ +G K+ S  KVG +V                                  
Sbjct: 66  VGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY 125

Query: 88  ---LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFL 144
               +  GGYA  V V    V+P+P  + ++            +  +     +    + +
Sbjct: 126 EDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLV 184

Query: 145 V 145
            
Sbjct: 185 G 185

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (198), Expect = 6e-19
 Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 12/181 (6%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172
             K  AA      T +  +  ++ +  GES LV   S                  Q+ + 
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAA----------CQIARA 51

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 232
            G+++  TAG+EE   +    GA    N++  +++ ++K+  G KG+D+I++ +      
Sbjct: 52  YGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLS 111

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292
           ++L  L+  GR+ ++G++G    E+N     AK  ++    L S + E      + ++  
Sbjct: 112 KDLSLLSHGGRVIVVGSRGTI--EINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

Query: 293 V 293
           +
Sbjct: 170 M 170

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 78.5 bits (192), Expect = 3e-18
 Identities = 42/173 (24%), Positives = 61/173 (35%), Gaps = 34/173 (19%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MKA V+ Q   P  L+++EVE P I   EVL++++A  +   D     G +P        
Sbjct: 1   MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLI 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA----------------------------LLGGG 92
           PG E  G +  VG  V+  KVGD+V                                  G
Sbjct: 59  PGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDG 118

Query: 93  GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
           GYAE     A  V+ +P    + +     ++         M      G   L 
Sbjct: 119 GYAEYCRAAADYVVKIPDNTII-EVQPLEKINEVFDR---MLKGQINGRVVLT 167

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 78.1 bits (191), Expect = 7e-18
 Identities = 42/180 (23%), Positives = 62/180 (34%), Gaps = 39/180 (21%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           M+A+ + + G P  L LQE+  P+ K  +VLIKVEA  +  +D   R+G +   +     
Sbjct: 1   MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 61  -------PGLECSGTILSVGKNVSRWKVGDQVC--------------------------- 86
                   G E +G I  VG  V  +  GD V                            
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 87  ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP-EVACTVWSTVFMTSHLSPGESFLV 145
            +   G YAE V VP  + +     V          E A      +     +  G   L+
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAI--GRQVLI 176

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 74.9 bits (183), Expect = 9e-17
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 13/161 (8%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           V ++          T          ++P  SF+             G+  +G  A+   K
Sbjct: 1   VPIELLGPLGCGIQTGAGACINALKVTPASSFVT-----------WGAGAVGLSALLAAK 49

Query: 172 CQGVRVFVTAGS-EEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230
             G  + +     E +L + K LGA   IN KT+D VA +KE T G     +        
Sbjct: 50  VCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEI 109

Query: 231 FQRNLGSLNIDGRLFIIG-TQGGAKTELNITSLFAKRLTVQ 270
            ++ + +L I G++ ++G  Q G   + ++  L     T+ 
Sbjct: 110 LKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTIL 150

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 73.4 bits (179), Expect = 5e-16
 Identities = 35/197 (17%), Positives = 55/197 (27%), Gaps = 59/197 (29%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA +  + GSP  L ++E+E    K  EV I+V AT +   D                 
Sbjct: 9   CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLG 66

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGGGGY----- 94
              EC+G + SVG  V+ +K GD+V                     C  L    Y     
Sbjct: 67  H--ECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124

Query: 95  --------------------------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128
                                     ++   V    +  V     L           ++ 
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESIN 184

Query: 129 STVFMTSHLSPGESFLV 145
             +     +  G+S   
Sbjct: 185 DAI---DLMKEGKSIRT 198

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 5e-16
 Identities = 29/175 (16%), Positives = 49/175 (28%), Gaps = 36/175 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             ++V+     P  L+L+    P+   +EVL+++ +  +  +D    +            
Sbjct: 8   NLSLVVH---GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 61  --PGLECSGTILSVGKNVSRWKVGDQVCA------------------------LLGGG-- 92
              G E SGT+  VG +V   K GD+V                                 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 93  --GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
                      A     +P  V       FP          F T     G   ++
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP---LEKALEAFETFKKGLGLKIML 176

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 70.8 bits (172), Expect = 3e-15
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 35/175 (20%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP- 59
           + A++         L+L++   P+ K+DEVL+++    +  +D    +            
Sbjct: 3   LSAVLY----KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 58

Query: 60  -YPGLECSGTILSVGKNVSRWKVGDQVCALLGGG-------------------------- 92
              G E SGT++ VGKNV   K GD+V    G                            
Sbjct: 59  MVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPD 118

Query: 93  --GYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
               A      A     +P   ++K                F  +      +  V
Sbjct: 119 DGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV-DAFEAARKKADNTIKV 172

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 70.6 bits (171), Expect = 3e-15
 Identities = 26/180 (14%), Positives = 49/180 (27%), Gaps = 21/180 (11%)

Query: 1   MKAIVITQPGSP-EVLQLQ--EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---- 53
            +A++ TQ G P +VL  Q  E++D  +  +EV++K   + +N +D  Q +G YP     
Sbjct: 4   AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAK 63

Query: 54  ----PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVP 109
                      P        +    +                     +          + 
Sbjct: 64  TTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIK 123

Query: 110 SGVSLKDAAAFPEVACTVWSTVF-MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQ 168
                +  A       T   ++  +     P                   +S  G   I 
Sbjct: 124 LPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQ---------DGVANSKDGKQLIT 174

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 69.9 bits (170), Expect = 5e-15
 Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 15/186 (8%)

Query: 113 SLKDAAAFPEVACTVWSTVFM---TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQM 169
           +LK+A A      T   ++               LV           G + G+G+ A+ M
Sbjct: 2   TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLV----------TGATGGVGSLAVSM 51

Query: 170 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 229
              +G  V  + G   +    + LGA   +  +  D +A        +     +D +G  
Sbjct: 52  LAKRGYTVEASTGKAAEHDYLRVLGAKEVLARE--DVMAERIRPLDKQRWAAAVDPVGGR 109

Query: 230 YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEV 289
                L  +   G + + G  GGA+    +     + +++          + +  I   +
Sbjct: 110 TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERL 169

Query: 290 EKNVWP 295
             ++ P
Sbjct: 170 AGDLKP 175

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 69.9 bits (170), Expect = 8e-15
 Identities = 36/193 (18%), Positives = 59/193 (30%), Gaps = 55/193 (28%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
            KA V+ +   P    ++EVE    K  EV IK+ AT + R+D     G+   P      
Sbjct: 9   CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG 66

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA--------------------------------- 87
              E +G + S+G+ V+  + GD+V                                   
Sbjct: 67  H--EAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124

Query: 88  ---------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132
                           LG   +++   V    V  + +  +L        +     +  F
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHV-LPFEKINEGF 183

Query: 133 MTSHLSPGESFLV 145
               L  GES   
Sbjct: 184 --DLLRSGESIRT 194

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 67.8 bits (164), Expect = 3e-14
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 34/174 (19%)

Query: 2   KAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKG--SYPPPKGAS 58
           KA  + +   P  L++++V+ P+++   +V++++    +   D    +G           
Sbjct: 1   KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLP 58

Query: 59  PYPGLECSGTILSVGKNVSRWKVGDQV---------------------CALLGGGGY--- 94
              G E  G I  V + V   + GD V                     C  L   G    
Sbjct: 59  YTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID 118

Query: 95  ---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV 145
              AE +      V+ +P  V ++      +    V   +        G + L+
Sbjct: 119 GGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL--EKGEVLGRAVLI 170

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 67.2 bits (163), Expect = 7e-14
 Identities = 32/218 (14%), Positives = 60/218 (27%), Gaps = 63/218 (28%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKD-------DEVLIKVEATALNRADTLQRKGSYPP 53
            + +V    G    +++Q+++ P+++D         V++KV +T +  +D    +G    
Sbjct: 2   NRGVVYLGSG---KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 58

Query: 54  PKGASPYPGL--------------------------------ECSGTILSVGKNVSRWKV 81
             G      +                                 C      V   V+  + 
Sbjct: 59  QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARA 118

Query: 82  GDQVCALLGGG---GYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH 136
           G     +  G    G AE V VP     +L +P      +     EV      ++   + 
Sbjct: 119 GGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAP 177

Query: 137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG 174
              GE                 +     F I   K   
Sbjct: 178 RGYGE---------------FDAGVPKKFVIDPHKTFS 200

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 66.9 bits (162), Expect = 1e-13
 Identities = 42/195 (21%), Positives = 65/195 (33%), Gaps = 17/195 (8%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           + A V    G+    +LQ ++  Q + DEVL+KV AT +   D + R   YP P  A   
Sbjct: 4   IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLG 61

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCA-----------LLGGGGYAEKVAVPAGQVLPVP 109
              E SG I ++G NV+  +VGD V               G   Y  +            
Sbjct: 62  H--EGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSE 119

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDV--HGGSSGIGTFAI 167
              +L               + F T  LS   + +       +  +        I   AI
Sbjct: 120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179

Query: 168 QMGKCQGVRVFVTAG 182
              K   ++  +   
Sbjct: 180 DSRKGITLKPIIKIA 194

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 65.8 bits (159), Expect = 1e-13
 Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 13/160 (8%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
           L+          T + +    + ++ G +            V G      +  +      
Sbjct: 3   LEKVCLIGCGFSTGYGSAVKVAKVTQGSTCA----------VFGLGGVGLSVIMGCKAAG 52

Query: 174 GVRVFVTAGSEEKLAVCKDLGADVCINYK-TEDFVARVKEETGGKGVDVILDCMGASYFQ 232
             R+     +++K A  K++GA  C+N +  +  +  V  E    GVD   + +G     
Sbjct: 53  AARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTM 112

Query: 233 RNLGSLNIDGR--LFIIGTQGGAKTELNITSLFAKRLTVQ 270
               S   +      I+G    ++       L     T +
Sbjct: 113 VTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWK 152

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 65.7 bits (159), Expect = 2e-13
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 19/188 (10%)

Query: 113 SLKDAAAFPEVACTVWSTVF--MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMG 170
             + A        T    V     + + P +  +V         V G S G+G+ A+ + 
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIV---------VTGASGGVGSTAVALL 52

Query: 171 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230
              G +V   +G E      K LGA   +          ++++     +D +    G   
Sbjct: 53  HKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTV----GDKV 108

Query: 231 FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI----V 286
             + L  +N  G +   G  GG      +     + + +Q         E +A      V
Sbjct: 109 LAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLV 168

Query: 287 SEVEKNVW 294
           +++ ++ +
Sbjct: 169 ADLPESFY 176

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 64.2 bits (155), Expect = 5e-13
 Identities = 28/160 (17%), Positives = 44/160 (27%), Gaps = 13/160 (8%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
           L           T +     T+ L PG    V           G         +      
Sbjct: 3   LDKVCLLGCGISTGYGAAVNTAKLEPGSVCAV----------FGLGGVGLAVIMGCKVAG 52

Query: 174 GVRVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQ 232
             R+     +++K A  K+ GA  CIN +     +  V  E    GVD   +C+G     
Sbjct: 53  ASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVM 112

Query: 233 RNLGSLNIDG--RLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           R        G     ++G     +             T +
Sbjct: 113 RAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWK 152

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 64.2 bits (155), Expect = 5e-13
 Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 40/165 (24%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           +KA+       P  L+  ++   +   ++V I++    +  +D  Q +  +         
Sbjct: 1   IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 61  PGLECSGTILSVGKNVSRWKVGDQV-------------------------CALLGGG--- 92
              E  G +++VG  V ++  GD V                                   
Sbjct: 59  GH-EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTP 117

Query: 93  --------GYAEKVAVPAGQVLPVP-SGVSLKDAAAFPEVACTVW 128
                   GY++++ V    VL +  + + +  A    E    + 
Sbjct: 118 DEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERML 162

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 63.5 bits (153), Expect = 8e-13
 Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 19/187 (10%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           +S ++AAAFP    T +  +   +   PGE  LV   + +        +      +    
Sbjct: 1   LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 59

Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231
            +  ++ +                 + +  +     A V E     G   ++  +     
Sbjct: 60  SRPEKLAL----------------PLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEV 103

Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 291
           + +LG L   GRL  IG   G    +    L  + L V    L     E    +V E   
Sbjct: 104 EESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGA--LVEEALG 161

Query: 292 NVWPAIA 298
            + P + 
Sbjct: 162 FLLPRLG 168

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.4 bits (153), Expect = 9e-13
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 110 SGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQ 168
           S   L + A   +   T +  V   +  L PG    +           G           
Sbjct: 2   SREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAI----------VGVGGLGHIAVQL 51

Query: 169 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 228
           +       V      EEKL + + LGAD  ++ +  D V +V E T G+GV+V +D +G+
Sbjct: 52  LKVMTPATVIALDVKEEKLKLAERLGADHVVDAR-RDPVKQVMELTRGRGVNVAMDFVGS 110

Query: 229 SYFQRN-LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 278
                     L   GRL I+G  G  +       + +  ++ + + + +  
Sbjct: 111 QATVDYTPYLLGRMGRLIIVGYGG--ELRFPTIRVISSEVSFEGSLVGNYV 159

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 63.0 bits (152), Expect = 2e-12
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 1  MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           KA V  +P  P  L L+ +     K  EV IK+ A+ +  +D+   K   P        
Sbjct: 9  CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF--PVI 64

Query: 61 PGLECSGTILSVGKNVSRWKVGDQVC 86
           G E  G + S+G  V+  K GD+V 
Sbjct: 65 LGHEAVGVVESIGAGVTCVKPGDKVI 90

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 62.0 bits (149), Expect = 4e-12
 Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 21/192 (10%)

Query: 106 LPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTF 165
           LP+   +        P    T +  +     +  GE+ L          V   +  +G+ 
Sbjct: 1   LPLSLALG---TIGMP--GLTAYFGLLEVCGVKGGETVL----------VSAAAGAVGSV 45

Query: 166 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 225
             Q+ K +G +V   AGS+EK+A  K +G D   NYKT + +    ++    G D   D 
Sbjct: 46  VGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDN 105

Query: 226 MGASYFQRNLGSLNIDGRLFIIGT------QGGAKTELNITSLFAKRLTVQAAGLRSRST 279
           +G  +    L  +   G++ I G               +  S+  K+L ++   +     
Sbjct: 106 VGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG 165

Query: 280 ENKALIVSEVEK 291
           + +   + ++ K
Sbjct: 166 DVREKALRDLMK 177

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.4 bits (148), Expect = 6e-12
 Identities = 22/187 (11%), Positives = 46/187 (24%), Gaps = 52/187 (27%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
             A+V+ +   P  L  +E E   I    +L+++ +  +  +D    +G  P        
Sbjct: 5   AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVC------------------------------ALLG 90
              E +G ++ V                                             + G
Sbjct: 63  GH-EGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 121

Query: 91  -----------GGGYAEKVAV-PAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138
                       G Y+  + + P   VL V   ++        E    +           
Sbjct: 122 INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKIT--HRLPLKEANKAL-----ELMESR 174

Query: 139 PGESFLV 145
                ++
Sbjct: 175 EALKVIL 181

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 36/174 (20%), Positives = 55/174 (31%), Gaps = 18/174 (10%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
             L   A       T +S +       PG+   V            G  G+G   I++  
Sbjct: 4   EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGV-----------VGIGGLGHMGIKLAH 51

Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDC-MGASY 230
             G  V     SE K    K LGAD  +N +  D +A        K  D IL+       
Sbjct: 52  AMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL-----KSFDFILNTVAAPHN 106

Query: 231 FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 284
                  L  DG + ++G          + +L  KR  +  + +       + L
Sbjct: 107 LDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEML 160

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 24/159 (15%), Positives = 44/159 (27%), Gaps = 12/159 (7%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
           L           T +     T+ + PG +  V           G  +      +      
Sbjct: 3   LDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAV----------FGLGAVGLAAVMGCHSAG 52

Query: 174 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV-ARVKEETGGKGVDVILDCMGASYFQ 232
             R+     + +K    K  GA   +N        ++V  +    GVD  L+C+G     
Sbjct: 53  AKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVM 112

Query: 233 RNLGSLNIDG-RLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           RN     + G  + ++                    T +
Sbjct: 113 RNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWK 151

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.1 bits (142), Expect = 3e-11
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 16/162 (9%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           V+ ++ A    ++  + +       ++ G   LV            G+  IG   + + K
Sbjct: 1   VTFEEGALIEPLSVGIHA--CRRGGVTLGHKVLV-----------CGAGPIGMVTLLVAK 47

Query: 172 CQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA--RVKEETGGKGVDVILDCMGA 228
             G  +V VT  S  +L+  K++GAD+ +    E      R  E   G   +V ++C GA
Sbjct: 48  AMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGA 107

Query: 229 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
               +        G   ++   G   T + +     + + ++
Sbjct: 108 EASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIK 149

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 59.5 bits (143), Expect = 3e-11
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 29/174 (16%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
           ++D     ++  T +      + + PG +  V            G+  +G  A    +  
Sbjct: 1   IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYV-----------AGAGPVGLAAAASARLL 48

Query: 174 GVRVF-VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG----- 227
           G  V  V   +  +LA  K  G ++           ++    G   VD  +D +G     
Sbjct: 49  GAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARG 108

Query: 228 -----------ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
                      A+     +    + G++ I G            +     L+++
Sbjct: 109 HGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIR 162

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 58.4 bits (140), Expect = 6e-11
 Identities = 24/160 (15%), Positives = 40/160 (25%), Gaps = 36/160 (22%)

Query: 1   MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY 60
           MK   +        L   E E P     + +++  A +   +D           +  +  
Sbjct: 1   MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDR-KNMI 56

Query: 61  PGLECSGTILSVGKNVSRWKVGDQVCALLG------------------------------ 90
            G E  G ++ VG  V  +K GD+V                                   
Sbjct: 57  LGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFK 116

Query: 91  GGGYAEKVAVPAGQ--VLPVPSGVSLKDAAAFPEVACTVW 128
            G + E   V      +  +P  V L              
Sbjct: 117 DGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHGFDHI 156

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 57.2 bits (137), Expect = 1e-10
 Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 15/159 (9%)

Query: 116 DAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV 175
           ++        T +     T+ ++PG +  V            G  G+G  AI   K  G 
Sbjct: 4   ESCLIGCGFATGYGAAVNTAKVTPGSTCAVF-----------GLGGVGFSAIVGCKAAGA 52

Query: 176 RVFVTAGS-EEKLAVCKDLGADVCINYKTEDF-VARVKEETGGKGVDVILDCMGASYFQR 233
              +  G+ ++K     +LGA  C+N K  D  +  V  E    GVD  ++C G      
Sbjct: 53  SRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMM 112

Query: 234 N--LGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           N    +    G   ++G     +       L     +++
Sbjct: 113 NALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLK 151

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 52.6 bits (126), Expect = 7e-10
 Identities = 17/83 (20%), Positives = 24/83 (28%), Gaps = 7/83 (8%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172
             + A        T    V                       V G S G+G+ A+ +   
Sbjct: 2   DARKAMIIGTAGFTAMLCVM-------ALEDAGVRPQDGEIVVTGASGGVGSTAVALLHK 54

Query: 173 QGVRVFVTAGSEEKLAVCKDLGA 195
            G +V   +G E      K LGA
Sbjct: 55  LGYQVVAVSGRESTHEYLKSLGA 77

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 53.8 bits (128), Expect = 2e-09
 Identities = 31/179 (17%), Positives = 55/179 (30%), Gaps = 17/179 (9%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           + L++A    ++  T +      + +  G S +V            G   +G   I   K
Sbjct: 1   MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVI-----------GIGAVGLMGIAGAK 48

Query: 172 CQGVRVF-VTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 230
            +G             +   K  GA   +NYK      +V + T GKGVD ++   G S 
Sbjct: 49  LRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSE 108

Query: 231 -FQRNLGSLNIDGRLFIIGTQGGAKT---ELNITSLFAKRLTVQAAGLRSRSTENKALI 285
              + +  +   G +  I   G                   T++           + L 
Sbjct: 109 TLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERLR 167

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 52.6 bits (125), Expect = 6e-09
 Identities = 24/177 (13%), Positives = 43/177 (24%), Gaps = 16/177 (9%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHG-GSSGIGTFAIQMGKC 172
           L   A       T +           G++ +          + G G  G+    I     
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVV----------IQGAGPLGLFGVVIARSLG 52

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMGA-S 229
               + +           +              E+    + + T G+G D IL+  G   
Sbjct: 53  AENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSR 112

Query: 230 YFQRNLGSLNIDGRLFIIGTQGGAKT-ELNI-TSLFAKRLTVQAAGLRSRSTENKAL 284
                   L   G   + G           +   L  K  T +   +   S   K +
Sbjct: 113 ALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTV 169

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 51.5 bits (122), Expect = 1e-08
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           VSL++ A    ++  V +     + +  G + LV            G+  IG  ++   K
Sbjct: 1   VSLEEGALLEPLSVGVHA--CRRAGVQLGTTVLV-----------IGAGPIGLVSVLAAK 47

Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED----FVARVKEETGGKGVDVILDCMG 227
             G  V  TA S  +L V K+ GADV +           +        G   +V +DC G
Sbjct: 48  AYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSG 107

Query: 228 ASYFQRNLG-SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
                          G L ++G        + + +  A+ + ++
Sbjct: 108 NEKCITIGINITRTGGTLMLVGMGSQ-MVTVPLVNACAREIDIK 150

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 50.9 bits (120), Expect = 2e-08
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 12/167 (7%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172
           +  +AA       T +  V   + L P ++ LV         V  G              
Sbjct: 2   NAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLV---------VGAGGGLGTMAVQIAKAV 51

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE-TGGKGVDVILDCMGASYF 231
            G  +      EE +   K  GAD  IN   +D +A ++          VI         
Sbjct: 52  SGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTL 111

Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 278
                +L   G+ +++    GA    +   +    +    + + ++S
Sbjct: 112 SVYPKALAKQGK-YVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQS 157

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.3 bits (116), Expect = 6e-08
 Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 14/173 (8%)

Query: 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK 171
           V   + A       TV+  +  T +  PG+   +                +G  A+Q  +
Sbjct: 1   VEFAEIAPILCAGVTVYKGLKQT-NARPGQWVAISGIGG-----------LGHVAVQYAR 48

Query: 172 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 231
             G+ V      + KL + + LGA + +N + ED V  ++ + GG    V++  +  S F
Sbjct: 49  AMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGG-AHGVLVTAVSNSAF 107

Query: 232 QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKAL 284
            + +G     G + ++G   G      I  +  K L +  + + +R+   +AL
Sbjct: 108 GQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHIAGSIVGTRADLQEAL 159

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (113), Expect = 3e-07
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 20/164 (12%)

Query: 118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRV 177
            A      T    V    H+S G +  +         V G +   G+ A Q+G   G   
Sbjct: 7   GAIGMPGLTSLIGVQEKGHISAGSNQTMV--------VSGAAGACGSLAGQIGHLLGCSR 58

Query: 178 FVT--AGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL 235
            V      E+ L +  +LG D  +NYKT +   +++E     GVDV  D +G       +
Sbjct: 59  VVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREAC-PGGVDVYFDNVGGDISNTVI 117

Query: 236 GSLNIDGRLFIIGTQGGAKTEL---------NITSLFAKRLTVQ 270
             +N +  + + G       ++                + +T +
Sbjct: 118 SQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRE 161

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 47.4 bits (111), Expect = 3e-07
 Identities = 46/191 (24%), Positives = 75/191 (39%), Gaps = 24/191 (12%)

Query: 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC 172
           S ++AA       T +  + +T    PGE   +            G  G+G  A+Q  K 
Sbjct: 2   SFEEAAPIFCAGVTTYKALKVT-GAKPGEWVAI-----------YGIGGLGHVAVQYAKA 49

Query: 173 QGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQ 232
            G+ V      +EKL + K+LGAD+ +N   ED    +KE+ GG    V+   +    FQ
Sbjct: 50  MGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVV-TAVSKPAFQ 108

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 292
               S+   G   ++G     +  + I       + +  + + +R    +AL        
Sbjct: 109 SAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIGSIVGTRKDLQEAL-------- 159

Query: 293 VWPAIAVGKVK 303
                A GKVK
Sbjct: 160 --QFAAEGKVK 168

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 9e-07
 Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 15/161 (9%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
            +          T +     T  + PG + +V            G  G+G   I   K  
Sbjct: 4   PEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV-----------FGLGGVGLSVIMGCKSA 52

Query: 174 GVRVFV-TAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYF 231
           G    +    +++K      +GA  CI+ K     ++ V  E  G  V    + +G    
Sbjct: 53  GASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLET 112

Query: 232 QRNLGSLNIDGR--LFIIGTQGGAKTELNITSLFAKRLTVQ 270
             +  +          ++G    AK       L     T +
Sbjct: 113 MIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWK 153

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 29/158 (18%), Positives = 46/158 (29%), Gaps = 11/158 (6%)

Query: 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ 173
           L+          + +     T+ ++PG +            V G      +  I      
Sbjct: 3   LERVCLIGCGFSSGYGAAINTAKVTPGSTCA----------VFGLGCVGLSAIIGCKIAG 52

Query: 174 GVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQ 232
             R+     + EK    K LGA  C+N +  D  V  V  E    GVD  LDC G +   
Sbjct: 53  ASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTL 112

Query: 233 RNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 270
           +      + G                 T       ++ 
Sbjct: 113 KAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSIN 150

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 42.7 bits (100), Expect = 8e-06
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTIL 70
          +    +L+ VE P +K+ EVL++    +++       + +    K  +   G + +  + 
Sbjct: 18 TQSDFELKTVELPPLKNGEVLLEALFLSVD----PYMRIASKRLKEGAVMMGQQVARVVE 73

Query: 71 SVGKNVSRWKVGDQVCALLGGGGYA 95
          S     S +  G  V A  G   + 
Sbjct: 74 S---KNSAFPAGSIVLAQSGWTTHF 95

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 155 VHGGSSGIG-TFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG--------ADVCINYKTE 204
           V G + GIG     Q+ K +    +  TA   EK    K +           V  +   +
Sbjct: 8   VTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLD 67

Query: 205 DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 241
            FV++V E  G  G+ ++++  G           N  
Sbjct: 68  TFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 11/93 (11%), Positives = 28/93 (30%), Gaps = 9/93 (9%)

Query: 155 VHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-----DVCINYKTEDFVA 208
           V       G   A+++ +  G  V     S ++    +               +  + + 
Sbjct: 5   VTNVKHFGGMGSALRLSE-AGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIE 63

Query: 209 RVKEETGGKGVDVILDCMGASYFQRNLGSLNID 241
            V    G   VDV++     +   + +    ++
Sbjct: 64  AVTSAYG--QVDVLVSNDIFAPEFQPIDKYAVE 94

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 36.4 bits (84), Expect = 0.003
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 155 VHGGSSGIG-TFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-----DVCINYKTEDFVA 208
           V GG+ GIG   A    + +G  V +     E   V + +G      D+    +   FV 
Sbjct: 10  VTGGARGIGRAIAQAFAR-EGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVE 68

Query: 209 RVKEETGGKGVDVILDCMGASYF 231
                 G   VDV+++    +  
Sbjct: 69  EAAYALG--RVDVLVNNAAIAAP 89

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.95
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.95
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.95
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.95
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.94
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.94
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.92
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.92
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.91
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.91
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.9
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.9
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.9
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.89
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.89
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.89
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.89
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.88
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.88
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.87
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.87
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.86
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.86
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.84
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.7
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.66
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.46
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.62
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.55
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.43
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.36
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.28
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.23
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.17
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.12
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.08
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.06
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.06
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.05
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.02
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.97
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.96
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.95
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.93
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.93
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.92
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.9
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.89
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.89
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.89
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.88
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.86
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.86
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.86
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.86
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.85
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.84
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.82
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.78
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.78
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.77
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.76
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.74
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.74
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.72
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.71
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.69
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.68
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.65
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.64
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.57
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.56
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.54
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.53
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.5
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.5
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.48
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.48
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.48
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.47
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.45
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.44
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.44
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.43
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.42
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.41
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.39
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.33
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.33
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.31
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.3
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.29
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.28
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.24
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.22
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.13
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.11
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.07
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.05
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.02
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	95.98
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.96
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.95
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	95.84
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.83
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	95.82
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.79
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	95.79
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	95.78
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.74
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.65
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.54
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.54
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.48
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.48
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	95.34
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	95.21
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.21
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	94.99
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.93
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.92
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	94.77
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.64
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.49
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.45
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	94.32
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.28
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.27
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.22
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.16
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.15
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	93.97
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.92
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	93.87
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.75
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.74
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	93.65
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	93.59
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	93.3
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	93.16
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.13
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.06
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.93
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.91
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.88
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.83
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	92.81
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.74
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.72
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.51
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.26
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	92.07
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	91.87
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	91.62
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	91.61
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.33
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	91.28
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	91.28
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.27
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.25
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.08
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.91
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	90.82
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	90.79
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	90.76
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	90.58
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	90.41
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.41
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	90.37
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	90.34
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.23
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.22
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	90.15
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	90.01
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.93
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.86
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	89.67
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.65
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.53
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	89.37
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	89.3
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	89.29
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.24
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.21
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	89.2
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	89.13
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	89.03
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	88.98
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.78
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	88.73
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	88.62
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.58
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	88.48
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.45
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.23
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	88.18
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	88.01
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	87.88
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	87.86
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	87.68
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	87.66
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.65
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	87.52
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	87.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	87.16
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.96
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	86.89
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	86.88
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	86.73
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	86.53
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.46
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.27
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.18
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	86.03
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	85.99
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	85.24
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	85.11
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	84.91
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	84.85
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	84.7
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	84.5
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	84.39
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	84.12
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	83.85
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	83.78
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	83.76
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	83.67
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	83.64
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	83.61
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	83.07
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	82.0
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.69
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	81.52
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	80.81
d2ifta1	183	Putative methylase HI0767 {Haemophilus influenzae	80.65

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-31  Score=211.47  Aligned_cols=145  Identities=30%  Similarity=0.443  Sum_probs=136.9

Q ss_pred             CEEEEEcCCCCCcceEEE-eecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~-~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~   79 (335)
                      |||++++++|+|+.++++ +.+.|.|++|||+|||.+++||++|++.+.|..+....+|.++|||++|+|+++|+++++|
T Consensus         3 MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   82 (150)
T d1yb5a1           3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAF   82 (150)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTC
T ss_pred             eeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeecc
Confidence            899999999999999986 5799999999999999999999999999999888877889999999999999999999999


Q ss_pred             CCCCEEEEec-CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790           80 KVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus        80 ~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      ++||+|++.. .+|+|+||+.++++.++++|+++++++||+++...+|+|+++...+....|+++||
T Consensus        83 ~vGdrV~~~~~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vli  149 (150)
T d1yb5a1          83 KKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILL  149 (150)
T ss_dssp             CTTCEEEESCCSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEE
T ss_pred             ccCccccccccccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEE
Confidence            9999998765 45899999999999999999999999999999999999999988899999999988

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.6e-28  Score=201.19  Aligned_cols=141  Identities=29%  Similarity=0.374  Sum_probs=128.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.+|++  +++++.+.|.|++|||+|||.+++||++|++.+.|.++....+|.++|||++|+|+++|+++++|+
T Consensus         6 MkA~v~~~~g~p--l~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~   83 (175)
T d1llua1           6 MKAAVVHAYGAP--LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVK   83 (175)
T ss_dssp             EEEEEBCSTTSC--CEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             cEEEEEEeCCCC--CEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccccc
Confidence            899999999877  899999999999999999999999999999999998877777899999999999999999999999


Q ss_pred             CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||||+..                            ..+|+|+||+.++++.++++|++++++.++++..++.|+++++ 
T Consensus        84 ~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~-  162 (175)
T d1llua1          84 EGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-  162 (175)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-
T ss_pred             cCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-
Confidence            99999742                            1247899999999999999999999998998999999999887 


Q ss_pred             HhcCCCCCCEEEE
Q 019790          133 MTSHLSPGESFLV  145 (335)
Q Consensus       133 ~~~~~~~~~~vli  145 (335)
                      +.. ..+|++|||
T Consensus       163 ~~g-~~~G~~VLV  174 (175)
T d1llua1         163 RAG-QIEGRIVLE  174 (175)
T ss_dssp             HTT-CCSSEEEEE
T ss_pred             HhC-CCCCCEEEe
Confidence            434 447999998

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.96  E-value=6.1e-29  Score=192.80  Aligned_cols=130  Identities=34%  Similarity=0.553  Sum_probs=122.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.+|++  +++++.+.|.|+++||+||+.++|||++|++.+.|.++....+|+++|+|++|+|           
T Consensus         1 MkA~~~~~~G~~--l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSC--EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCC--CEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------
Confidence            999999999977  9999999999999999999999999999999999998877788999999999998           


Q ss_pred             CCCEEEEecCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790           81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus        81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      +||+|+++..+|+|+||+.++++.++++|+++++++||++++.+.|||++|.+.+  +.|++||+
T Consensus        68 vGd~V~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~  130 (131)
T d1iz0a1          68 EGRRYAALVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVR  130 (131)
T ss_dssp             TTEEEEEECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEE
T ss_pred             ccceEEEEeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEE
Confidence            3999999999999999999999999999999999999999999999999996655  55888886

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.8e-28  Score=193.76  Aligned_cols=142  Identities=27%  Similarity=0.409  Sum_probs=126.4

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV   81 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~   81 (335)
                      +.+.++++|+|+.|++++.+.|.|++|||+|||.+++||++|++++.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~v   80 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP-PSLPSGLGTEAAGIVSKVGSGVKHIKA   80 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-SSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCC-Ccceeeeccccccceeeeeeecccccc
Confidence            5788999999999999999999999999999999999999999999998764 457999999999999999999999999


Q ss_pred             CCEEEEe-cCCcceeeEEEecCCceEeCCCCCChhhh--ccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790           82 GDQVCAL-LGGGGYAEKVAVPAGQVLPVPSGVSLKDA--AAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus        82 Gd~V~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a--a~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      ||+|+.. ...|+|++|..++.+.++++|++++++++  ++++....++++++.+ .++++|++|||
T Consensus        81 GdrV~~~~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1          81 GDRVVYAQSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             TCEEEESCCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             cceeeeeccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            9999754 35689999999999999999999987644  4566777788888744 67899999998

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.3e-28  Score=196.48  Aligned_cols=157  Identities=28%  Similarity=0.506  Sum_probs=145.0

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +|+++||+++++++|||++|.+..++++|++|||          +|++|++|++++|+|+.+|++|+++++++++++.++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV----------~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~   70 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLV----------HGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL   70 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEE----------EeccccccccccccccccCccccccccccccccccc
Confidence            5899999999999999999988899999999999          998999999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEE
Q 019790          192 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA  271 (335)
Q Consensus       192 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
                      ++|++.++|+++.++.+.+++.++++++|++|||+|+..+..++++++++|+++.+|...  ..++++..++.+++++.+
T Consensus        71 ~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~--~~~~~~~~~~~k~~~i~g  148 (174)
T d1yb5a2          71 QNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRG--TIEINPRDTMAKESSIIG  148 (174)
T ss_dssp             HTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCS--CEEECTHHHHTTTCEEEE
T ss_pred             ccCcccccccccccHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCC--CCCCCHHHHHHCCCEEEE
Confidence            999999999999999999999999999999999999988999999999999999998643  356778888999999999


Q ss_pred             eeccccchh
Q 019790          272 AGLRSRSTE  280 (335)
Q Consensus       272 ~~~~~~~~~  280 (335)
                      +.++....+
T Consensus       149 ~~~~~~~~~  157 (174)
T d1yb5a2         149 VTLFSSTKE  157 (174)
T ss_dssp             CCGGGCCHH
T ss_pred             EEecCCCHH
Confidence            987765443

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=4.5e-28  Score=200.05  Aligned_cols=181  Identities=26%  Similarity=0.408  Sum_probs=156.5

Q ss_pred             hhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC
Q 019790          115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG  194 (335)
Q Consensus       115 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g  194 (335)
                      +|||+++++++|||+++.+..++++|++|||          +||+|++|++++|+|+.+|++|+++++++++.+.++++|
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI----------~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~G   70 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLI----------HSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLG   70 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------TTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEE----------ECCCCCcccccchhhccccccceeeeccccccccccccc
Confidence            4789999999999999999999999999999          999999999999999999999999999999999999999


Q ss_pred             CCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeec
Q 019790          195 ADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGL  274 (335)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (335)
                      +++++++++.++.+.+++.+++.++|++|||+|++.+..++++|+++|+++.+|..............+.+++++.+..+
T Consensus        71 a~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (183)
T d1pqwa_          71 VEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDL  150 (183)
T ss_dssp             CSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCH
T ss_pred             ccccccCCccCHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEc
Confidence            99999999999999999999999999999999999999999999999999999876544322223334568889888876


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHCCcccccc
Q 019790          275 RSRSTENKALIVSEVEKNVWPAIAVGKVKPVI  306 (335)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  306 (335)
                      ..... ......++.++.+++++.+|+++|++
T Consensus       151 ~~~~~-~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         151 DLNLK-LQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHHHH-HCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cceec-cCHHHHHHHHHHHHHHHHCCCCceeC
Confidence            54432 22334566788899999999999854

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.95  E-value=9.1e-29  Score=203.13  Aligned_cols=141  Identities=21%  Similarity=0.223  Sum_probs=123.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |.|+++..++   .|+++|.+.|+|+++||+||+.+++||++|++.+.+....  ....|+++|||++|+|+++|+++++
T Consensus         2 ~maAVl~g~~---~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~   78 (178)
T d1e3ja1           2 NLSAVLYKQN---DLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   78 (178)
T ss_dssp             CEEEEEEETT---EEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ceEEEEEcCC---cEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCC
Confidence            3445555554   3999999999999999999999999999999988765322  2356889999999999999999999


Q ss_pred             CCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~  130 (335)
                      |++||+|+...                            .+|+|+||++++++.++++|+++++++++++++++.|||++
T Consensus        79 ~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a  158 (178)
T d1e3ja1          79 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA  158 (178)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHH
T ss_pred             CCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHH
Confidence            99999997531                            35899999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCEEEE
Q 019790          131 VFMTSHLSPGESFLV  145 (335)
Q Consensus       131 l~~~~~~~~~~~vli  145 (335)
                      + +.+++++|++|+|
T Consensus       159 ~-~~~~~~~g~~VlV  172 (178)
T d1e3ja1         159 F-EAARKKADNTIKV  172 (178)
T ss_dssp             H-HHHHHCCTTCSEE
T ss_pred             H-HHhCCCCCCEEEE
Confidence            8 6788999999999

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=6e-28  Score=196.60  Aligned_cols=140  Identities=20%  Similarity=0.292  Sum_probs=126.0

Q ss_pred             EEEEEcCCCCCcceEEEeecCCCC-CCCcEEEEEEEeecCcchhhhhcCCCCC--CCCCCCCCCCceEEEEEEecCCCCC
Q 019790            2 KAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         2 ka~~~~~~~~~~~l~~~~~~~~~~-~~~eVlI~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      ||+++.++|+|  |++++.+.|++ .++||+|||.+++||++|++.+.|..+.  ...+|+++|||++|+|+++|+++++
T Consensus         1 kA~~~~~~g~p--l~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~   78 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG   78 (171)
T ss_dssp             CEEEESSTTSC--CEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCC--CEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCc
Confidence            79999999988  99999999986 6899999999999999999999887542  2356899999999999999999999


Q ss_pred             CCCCCEEEEec---------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      |++||||+...                           .+|+|+||+.++.+.++++|++++++.++++.+++.|||+++
T Consensus        79 ~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al  158 (171)
T d1h2ba1          79 LEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL  158 (171)
T ss_dssp             CCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH
T ss_pred             CCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH
Confidence            99999998632                           358999999999999999999999998988999999999999


Q ss_pred             HHhcCCCCCCEEEE
Q 019790          132 FMTSHLSPGESFLV  145 (335)
Q Consensus       132 ~~~~~~~~~~~vli  145 (335)
                       +..++ .|++|||
T Consensus       159 -~~~~~-~G~~VlI  170 (171)
T d1h2ba1         159 -EKGEV-LGRAVLI  170 (171)
T ss_dssp             -HTTCC-SSEEEEE
T ss_pred             -HhcCC-CCCEEEe
Confidence             56777 8999998

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=1e-27  Score=195.67  Aligned_cols=139  Identities=30%  Similarity=0.476  Sum_probs=120.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.++++  |++++.+.|.|++|||+|||.++|||++|++.+.+.......+|.++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~p--l~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCC--cEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence            999999998876  999999999999999999999999999999999887666677899999999999999999999999


Q ss_pred             CCCEEEEe----------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHH
Q 019790           81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF  132 (335)
Q Consensus        81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~  132 (335)
                      +||+|+..                            ..+|+|+||++++++.++++|++++++.|+ +. ...++++++ 
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~-  155 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRM-  155 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHH-
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHH-
Confidence            99999642                            124899999999999999999999987655 43 455677666 


Q ss_pred             HhcCCCCCCEEEE
Q 019790          133 MTSHLSPGESFLV  145 (335)
Q Consensus       133 ~~~~~~~~~~vli  145 (335)
                      ....+ +|++|||
T Consensus       156 ~~~~~-~G~tVlV  167 (171)
T d1rjwa1         156 LKGQI-NGRVVLT  167 (171)
T ss_dssp             HTTCC-SSEEEEE
T ss_pred             HhcCC-CCCEEEE
Confidence            34555 5999999

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=8.3e-28  Score=192.04  Aligned_cols=141  Identities=21%  Similarity=0.322  Sum_probs=128.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++++.++++..+++++.+.|+|++|||+|||.++|||++|++.+.|..+.....|+++|+|++|+|++  .+++.|+
T Consensus         4 ~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~   81 (152)
T d1xa0a1           4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFR   81 (152)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCC
T ss_pred             eEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCccc
Confidence            79999999998877889999999999999999999999999999999998777777899999999999998  5567899


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      +||+|+...      ++|+|+||++++.+.++++|++++ .+||+++++.+|||.++....+++ |++||+
T Consensus        82 ~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~  150 (152)
T d1xa0a1          82 EGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVR  150 (152)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEE
T ss_pred             cCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEE
Confidence            999998764      458999999999999999999998 468889999999999988888875 999999

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.95  E-value=1.6e-27  Score=198.88  Aligned_cols=142  Identities=23%  Similarity=0.253  Sum_probs=129.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++.+++.|  |+++|.+.|+|+++||+|||.++|||++|++.+.|.... ..+|.++|||++|+|+++|+++++|+
T Consensus         9 ~kAav~~~~~~p--l~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~-~~~p~i~GhE~~G~v~~vG~~v~~~~   85 (199)
T d1cdoa1           9 CKAAVAWEANKP--LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVTEFQ   85 (199)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEecCCCC--cEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccc-cccccccccccceEEEEEcCCCceec
Confidence            479999998877  999999999999999999999999999999999986543 35699999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||||....                                                .+|+|+||++++.+.++++|+++
T Consensus        86 ~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~  165 (199)
T d1cdoa1          86 PGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSV  165 (199)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCC
Confidence            999997531                                                13899999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      +++++|++.+++.|++.++......+.|++|||
T Consensus       166 ~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv  198 (199)
T d1cdoa1         166 KLDEFITHRMPLESVNDAIDLMKHGKCIRTVLS  198 (199)
T ss_dssp             CCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEe
Confidence            999999999999999999988888899999998

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=1.4e-27  Score=197.49  Aligned_cols=143  Identities=19%  Similarity=0.240  Sum_probs=125.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCC-CCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV-SRW   79 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~-~~~   79 (335)
                      |||+++..+++...+++.+.+.++++++||+||+.++|||++|++.+.|.++. ..+|+++|||++|+|+++|+++ +.+
T Consensus         7 ~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~-~~~P~i~GHE~~G~Vv~vG~~v~~~~   85 (192)
T d1piwa1           7 FEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN-MKMPLVVGHEIVGKVVKLGPKSNSGL   85 (192)
T ss_dssp             EEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSC-CCSSEECCCCEEEEEEEECTTCCSSC
T ss_pred             eEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCC-CCCCcCcccccccchhhccccccccc
Confidence            79999999999888999998888889999999999999999999999987654 4579999999999999999987 569


Q ss_pred             CCCCEEEEe-----------------------------------cCCcceeeEEEecCCceEeCCCCCChhhhccCcchH
Q 019790           80 KVGDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA  124 (335)
Q Consensus        80 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~  124 (335)
                      ++||||...                                   ..+|+|+||++++++.++++|+++++++|+.+...+
T Consensus        86 k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~  165 (192)
T d1piwa1          86 KVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGV  165 (192)
T ss_dssp             CTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHH
T ss_pred             CCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHH
Confidence            999999521                                   124899999999999999999999998877555457


Q ss_pred             HHHHHHHHHhcCCCCCCEEEE
Q 019790          125 CTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       125 ~~a~~~l~~~~~~~~~~~vli  145 (335)
                      .|||+++ +.+++++++.||+
T Consensus       166 ~ta~~~l-~~~~vk~g~~Vvv  185 (192)
T d1piwa1         166 HEAFERM-EKGDVRYRFTLVG  185 (192)
T ss_dssp             HHHHHHH-HHTCCSSEEEEEC
T ss_pred             HHHHHHH-HHhCCCCCCEEEE
Confidence            7999999 6789999999998

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.4e-26  Score=188.87  Aligned_cols=177  Identities=33%  Similarity=0.467  Sum_probs=149.4

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +|+++||+++++++|||++|.+..++++|++|||          +|+.|++|++++|+|+..|++|+++++++++++.++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv----------~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~   70 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLF----------HAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL   70 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEE----------SSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEE----------EccccccchHHHHHHHHhCCeEeecccchHHHHHHH
Confidence            5899999999999999999988889999999999          999999999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhc-ceEEE
Q 019790          192 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK-RLTVQ  270 (335)
Q Consensus       192 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~  270 (335)
                      ++|+++++|+++.++.+++++.|+++++|+++|++|++.+..++.+++++|+++.+|.........+...+..+ .+.+.
T Consensus        71 ~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  150 (179)
T d1qora2          71 KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVT  150 (179)
T ss_dssp             HHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEE
T ss_pred             hcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEE
Confidence            99999999999999999999999999999999999999999999999999999999887766555665554443 34444


Q ss_pred             EeeccccchhhHHHHHHHHHHHHHHHHHCC
Q 019790          271 AAGLRSRSTENKALIVSEVEKNVWPAIAVG  300 (335)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  300 (335)
                      ...+..+..  ..+...+.++++++++++|
T Consensus       151 ~~~l~~~~~--~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         151 RPSLQGYIT--TREELTEASNELFSLIASG  178 (179)
T ss_dssp             CCCHHHHCC--SHHHHHHHHHHHHHHHHTT
T ss_pred             eeEEeeecC--CHHHHHHHHHHHHHHHHCc
Confidence            333332211  1123445566688888877

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=1.1e-26  Score=189.17  Aligned_cols=172  Identities=19%  Similarity=0.298  Sum_probs=142.1

Q ss_pred             CChhhhccCcchHHHHHHHHH---HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~---~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      +|+++||++++++.|||++++   +....++|++|||          +|++|++|.+++|+|+.+|++|+++++++++.+
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI----------~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~   70 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLV----------TGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD   70 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEE----------SSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEE----------EeccchHHHHHHHHHHHcCCceEEecCchHHHH
Confidence            589999999999999997654   5678889999999          999999999999999999999999999999999


Q ss_pred             HHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceE
Q 019790          189 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT  268 (335)
Q Consensus       189 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  268 (335)
                      .++++|++.++|+++. + ....+.++++++|+|||++|+..+...+++|+++||++.+|...+...+++...++.|+++
T Consensus        71 ~~~~lGa~~vi~~~~~-~-~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~  148 (176)
T d1xa0a2          71 YLRVLGAKEVLAREDV-M-AERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVS  148 (176)
T ss_dssp             HHHHTTCSEEEECC-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCE
T ss_pred             HHHhcccceeeecchh-H-HHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcE
Confidence            9999999999998654 3 3344567778999999999999999999999999999999998887788999999999999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCcccc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP  304 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  304 (335)
                      +.|........++...        +++.+. |.++|
T Consensus       149 i~Gv~~~~~~~~~~~~--------~~~~la-g~lkP  175 (176)
T d1xa0a2         149 LLGIDSVYCPMDLRLR--------IWERLA-GDLKP  175 (176)
T ss_dssp             EEECCSSSCCHHHHHH--------HHHHHH-TTTCC
T ss_pred             EEEEeCCcCCHHHHHH--------HHHHHh-cccCC
Confidence            9998655444333222        455553 66665

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.94  E-value=9.6e-26  Score=185.67  Aligned_cols=169  Identities=21%  Similarity=0.307  Sum_probs=148.9

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE
Q 019790          118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV  197 (335)
Q Consensus       118 a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~  197 (335)
                      ++++++++|||++|.+..++++|++|||          +|++|.+|++++|+++..|++|+++++++++.+.++++|+++
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV----------~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~   77 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLV----------SAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDA   77 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEE----------EeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhh
Confidence            4688999999999999999999999999          999999999999999999999999999999999999999999


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCC------ccccChhHHhhcceEEEE
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA------KTELNITSLFAKRLTVQA  271 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~  271 (335)
                      ++++.+.++.+.+.+.+++.++|+||||+|++.+...+++++++|+++.+|.....      ...+++..++.|++++.|
T Consensus        78 vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g  157 (182)
T d1v3va2          78 AFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEG  157 (182)
T ss_dssp             EEETTSCSCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEE
T ss_pred             hcccccccHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEE
Confidence            99999999999999999999999999999999999999999999999999865432      234566788999999999


Q ss_pred             eeccccchhhHHHHHHHHHHHHHHHHHCC
Q 019790          272 AGLRSRSTENKALIVSEVEKNVWPAIAVG  300 (335)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  300 (335)
                      +++..+..+.    ..+.++++++|+.+|
T Consensus       158 ~~~~~~~~~~----~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         158 FIVYRWQGDV----REKALRDLMKWVLEG  182 (182)
T ss_dssp             CCGGGCCHHH----HHHHHHHHHHHHHTT
T ss_pred             EEEeccChHH----HHHHHHHHHHHHhCc
Confidence            9887664433    344566688888876

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=1.3e-26  Score=192.68  Aligned_cols=142  Identities=24%  Similarity=0.263  Sum_probs=128.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  |++++.|.|+|+++||||||.++|||++|++++.|..+. ..+|.++|||++|+|+++|++++.++
T Consensus         7 ~kAav~~~~g~~--l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~-~~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           7 CKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPE-GCFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTT-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCccc-ccccccCCcceeeEEEeecCCceecC
Confidence            799999999987  999999999999999999999999999999999997544 35799999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|....                                                .+|+|+||+++++..++++|+++
T Consensus        84 ~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l  163 (197)
T d2fzwa1          84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLI  163 (197)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCCC
Confidence            999997531                                                02799999999999999999999


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      +.++++++.+++.+++.++.....-+.+++|||
T Consensus       164 ~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvv  196 (197)
T d2fzwa1         164 KVDEFVTHNLSFDEINKAFELMHSGKSIRTVVK  196 (197)
T ss_dssp             CSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEE
T ss_pred             CHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEe
Confidence            999999999999999999866655677888887

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.94  E-value=8.8e-27  Score=195.00  Aligned_cols=138  Identities=25%  Similarity=0.303  Sum_probs=123.6

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++|  ++++|.|.|.|+++||||||.++|||++|++.++|..+.  .+|+++|||++|+|+++|+++++|+
T Consensus         9 ~KAaV~~~~g~p--l~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~v~GHE~~G~V~~vG~~V~~~~   84 (202)
T d1e3ia1           9 CKAAIAWKTGSP--LCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKA--LFPVVLGHECAGIVESVGPGVTNFK   84 (202)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeeccc--ccccccccccceEEeeecCCceecc
Confidence            799999999887  999999999999999999999999999999999997754  4699999999999999999999999


Q ss_pred             CCCEEEEec----------------------------------------------------CCcceeeEEEecCCceEeC
Q 019790           81 VGDQVCALL----------------------------------------------------GGGGYAEKVAVPAGQVLPV  108 (335)
Q Consensus        81 ~Gd~V~~~~----------------------------------------------------~~g~~~~~~~~~~~~~~~~  108 (335)
                      +||+|+...                                                    ..|+|+||+++++..++++
T Consensus        85 ~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~l  164 (202)
T d1e3ia1          85 PGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARV  164 (202)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEEC
Confidence            999997531                                                    0288999999999999999


Q ss_pred             CCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790          109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       109 p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      |++++++.++++.+++.+++.++..   +++|++|.|
T Consensus       165 P~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~v  198 (202)
T d1e3ia1         165 DDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRT  198 (202)
T ss_dssp             CTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEE
Confidence            9999999999999999999888743   367888766

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=1.8e-26  Score=189.19  Aligned_cols=141  Identities=29%  Similarity=0.353  Sum_probs=116.9

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC-------CCCCCCCCCCCceEEEEEEec
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP-------PPKGASPYPGLECSGTILSVG   73 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~-------~~~~~p~~~G~e~~G~V~~vG   73 (335)
                      |||+++.++|+|  |++++.+.|+|+++||+||+.++|||++|++.+.|..+       ....+|+++|||++|+|+++|
T Consensus         1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g   78 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG   78 (177)
T ss_dssp             CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred             CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence            999999999987  99999999999999999999999999999999998643       233679999999999999999


Q ss_pred             CCCCCCCCCCEEEEec---------------------------CCcceeeEEEecCCc-eEeCCCCCChhhhccCcchHH
Q 019790           74 KNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQ-VLPVPSGVSLKDAAAFPEVAC  125 (335)
Q Consensus        74 ~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-~~~~p~~~~~~~aa~~~~~~~  125 (335)
                      +++++|++||+|....                           .+|+|+||++++... ++++|+..+.+.++.+..++.
T Consensus        79 ~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~  158 (177)
T d1jvba1          79 DEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEAN  158 (177)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHH
T ss_pred             cCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHH
Confidence            9999999999997532                           348999999997765 556655444444444457888


Q ss_pred             HHHHHHHHhcCCCCCCEEEE
Q 019790          126 TVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       126 ~a~~~l~~~~~~~~~~~vli  145 (335)
                      ++++++ ...++ .|++|||
T Consensus       159 ~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         159 EAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHH-HTTCC-CSEEEEE
T ss_pred             HHHHHH-Hhhcc-cCCceEC
Confidence            999988 55565 5899998

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=5.6e-26  Score=188.26  Aligned_cols=140  Identities=26%  Similarity=0.321  Sum_probs=121.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |+|+++...+.+  |++++.+.|+|++|||+||+.++|||++|++.+.|.++.  .+|+++|||++|+|+++|+++++|+
T Consensus         4 ~~Aav~~~~g~~--l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~--~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           4 IIAAVTPCKGAD--FELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV--PLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             EEEEEBCSTTCC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEcCCCCC--cEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc--cCCcccccceEEEeeecCccceeEc
Confidence            689999988876  999999999999999999999999999999999998754  4799999999999999999999999


Q ss_pred             CCCEEEEec-------------------------------------------------CCcceeeEEEecCCceEeCCCC
Q 019790           81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG  111 (335)
Q Consensus        81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~  111 (335)
                      +||+|+...                                                 ..|+|+||.+++...++++|++
T Consensus        80 vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          80 VGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             TTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             cCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            999996421                                                 0257899999999999999998


Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEE
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVT  180 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~  180 (335)
                      +++++++                         ++           ++.|++|++++|+++.+|++.++.
T Consensus       160 i~~~~~~-------------------------~i-----------~g~g~~g~~aiq~a~~~g~~~iia  192 (194)
T d1f8fa1         160 FPFDQLV-------------------------KF-----------YAFDEINQAAIDSRKGITLKPIIK  192 (194)
T ss_dssp             CCGGGGE-------------------------EE-----------EEGGGHHHHHHHHHHTSCSEEEEE
T ss_pred             CCcccEE-------------------------EE-----------eCcHHHHHHHHHHHHHcCCCEEEE
Confidence            8765543                         33           358999999999999999965554

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.8e-26  Score=181.23  Aligned_cols=129  Identities=19%  Similarity=0.311  Sum_probs=116.0

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++.+++++..+++++.+.|+|.+|||+|||.|+|||++|+....|.++....+|+++|+|++|+|+++|.+  .|+
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~~--~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDP--RFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECST--TCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeeccC--Ccc
Confidence            999999999999999999999999999999999999999999999999988777778999999999999998764  699


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHH
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV  131 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l  131 (335)
                      +||+|+..+      .+|+|+||++++.+.++++|+++|+++||++++++.||+.++
T Consensus        79 ~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          79 AGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             ceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999998754      359999999999999999999999999999999888887544

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=2.8e-26  Score=186.85  Aligned_cols=150  Identities=30%  Similarity=0.442  Sum_probs=127.9

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +++++||+++++++|||+++. ..++++|++|||          +|++|++|++++|+|+.+|++|+++++++++.+.++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI----------~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~   69 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLV----------QAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL   69 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEE----------SSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEE----------Eeccccchhhhhhhhccccccccccccccccccccc
Confidence            579999999999999999995 589999999999          999999999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEE
Q 019790          192 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA  271 (335)
Q Consensus       192 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
                      ++|++.++|+.+     ...+.+.++++|++|||+| +.+..++++++++|+++.+|...+...+++...++.|++++.|
T Consensus        70 ~lGa~~~i~~~~-----~~~~~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g  143 (171)
T d1iz0a2          70 ALGAEEAATYAE-----VPERAKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLG  143 (171)
T ss_dssp             HTTCSEEEEGGG-----HHHHHHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEE
T ss_pred             ccccceeeehhh-----hhhhhhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEE
Confidence            999999998753     2344555678999999988 4678899999999999999987766667888899999999999


Q ss_pred             eeccccc
Q 019790          272 AGLRSRS  278 (335)
Q Consensus       272 ~~~~~~~  278 (335)
                      +++..+.
T Consensus       144 ~~~~~~~  150 (171)
T d1iz0a2         144 FWLTPLL  150 (171)
T ss_dssp             CCHHHHT
T ss_pred             EeCcChh
Confidence            9876553

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.6e-26  Score=188.46  Aligned_cols=139  Identities=22%  Similarity=0.241  Sum_probs=118.2

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCC--CCCCCCCCCCCceEEEEEEecCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR   78 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~   78 (335)
                      |+|++++.+++   |++++.+.|+|+++||+|||.+++||++|++.+.+...  ....+|.++|||++|+|+++|+++++
T Consensus         8 ~~a~V~~gp~~---l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   84 (185)
T d1pl8a1           8 NLSLVVHGPGD---LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (185)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             CEEEEEeCCCe---EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence            67999997754   99999999999999999999999999999999875421  12346889999999999999999999


Q ss_pred             CCCCCEEEEec----------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHH
Q 019790           79 WKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST  130 (335)
Q Consensus        79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~  130 (335)
                      |++||+|+...                            .+|+|+||++++.+.++++|++++++++++++  +++|+++
T Consensus        85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~~a  162 (185)
T d1pl8a1          85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKALEA  162 (185)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHHHH
T ss_pred             ecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHHHH
Confidence            99999997531                            34789999999999999999999999987643  4566776


Q ss_pred             HHHhcCCCCCCEEEE
Q 019790          131 VFMTSHLSPGESFLV  145 (335)
Q Consensus       131 l~~~~~~~~~~~vli  145 (335)
                      + +..++.+|++|||
T Consensus       163 ~-~~~~~~~G~~VlI  176 (185)
T d1pl8a1         163 F-ETFKKGLGLKIML  176 (185)
T ss_dssp             H-HHHHTTCCSEEEE
T ss_pred             H-HHhCCCCCCEEEE
Confidence            6 5567789999999

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.93  E-value=4.1e-25  Score=182.92  Aligned_cols=179  Identities=19%  Similarity=0.287  Sum_probs=147.6

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccc-cccchHHHHHHHHHhhCCCeEEEEecChh----h
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVH-GGSSGIGTFAIQMGKCQGVRVFVTAGSEE----K  186 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~-g~~g~~G~~a~~~a~~~g~~V~~~~~~~~----~  186 (335)
                      +|+++||+++++++|||++|.+..++++|++++|          + ||+|++|++++|+||.+|++|++++++.+    .
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli----------~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~   70 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFI----------QNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV   70 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEE----------ESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEE----------EeCCCchHHHHHHHHHhhcCCeEEEEEecccccchH
Confidence            5899999999999999999998899999998777          5 77899999999999999999999986644    3


Q ss_pred             HHHHHHcCCCEEEeCCC---ccHHHHHHHHh--CCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhH
Q 019790          187 LAVCKDLGADVCINYKT---EDFVARVKEET--GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITS  261 (335)
Q Consensus       187 ~~~~~~~g~~~~~~~~~---~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~  261 (335)
                      .+.++++|+++++++++   ..+.+.+++.+  .++++|++|||+|++.+...+++|+++|+++.+|...+...+++...
T Consensus        71 ~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~  150 (189)
T d1gu7a2          71 VASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSL  150 (189)
T ss_dssp             HHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSCCEEECHHH
T ss_pred             HhhhhhccccEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCCCccCcHHH
Confidence            45678899999998753   34445555543  34579999999999999999999999999999998777667788889


Q ss_pred             HhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          262 LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      ++.|++++.|+++..+... .++..++.++++.+|+++|+
T Consensus       151 l~~k~~~i~G~~~~~~~~~-~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         151 YIFKNFTSAGFWVTELLKN-NKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             HHHSCCEEEECCHHHHHTT-CHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHCCcEEEEEEehHhhhh-CHHHHHHHHHHHHHHHHcCC
Confidence            9999999999877544322 23455677777899988875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.92  E-value=1.1e-24  Score=177.23  Aligned_cols=168  Identities=23%  Similarity=0.331  Sum_probs=149.1

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++.+||++++++.|||+++ +..+++++++|+|          +|++|++|++++++++..|+ +|+++++++++++.+
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV----------~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~   69 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLV----------VGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA   69 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEE----------ETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEE----------EeccccceeeeeecccccccccccccccchhhHHHH
Confidence            57899999999999999999 6688999999999          99889999999999999996 899999999999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEE
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV  269 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  269 (335)
                      +++|++.++++++.++.+.+++.+.++++|++|||+|+.. ++.++++++++|+++.+|.... ..+++...++.+++++
T Consensus        70 ~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~i~i  148 (170)
T d1jvba2          70 KRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-DLHYHAPLITLSEIQF  148 (170)
T ss_dssp             HHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC-CCCCCHHHHHHHTCEE
T ss_pred             HHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC-ccccCHHHHHhCCcEE
Confidence            9999999999999999999999999999999999999865 6888999999999999987654 4688889999999999


Q ss_pred             EEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          270 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      .|++.+++.+          ++.+++|+++|+
T Consensus       149 ~Gs~~~~~~d----------~~~~l~lv~~GK  170 (170)
T d1jvba2         149 VGSLVGNQSD----------FLGIMRLAEAGK  170 (170)
T ss_dssp             EECCSCCHHH----------HHHHHHHHHTTS
T ss_pred             EEEecCCHHH----------HHHHHHHHHcCC
Confidence            9998764321          333788888875

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.92  E-value=2.9e-24  Score=175.32  Aligned_cols=171  Identities=24%  Similarity=0.330  Sum_probs=147.7

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      ++++.+++++|.+.|||+++.+..++++|++|+|          +| .|++|++++|+|+.+|+ +|+++++++++++.+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI----------~G-~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a   69 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVT----------WG-AGAVGLSALLAAKVCGASIIIAVDIVESRLELA   69 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------ES-CSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEE----------eC-CCHHHhhhhhcccccccceeeeeccHHHHHHHH
Confidence            3567899999999999999989999999999999          98 59999999999999999 566778899999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceE
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLT  268 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~  268 (335)
                      +++|+++++|+++.++.+++++.+++ ++|++|||+|+. .+..+++.++++|+++.+|.... ...+++..+++.++++
T Consensus        70 ~~~Ga~~~i~~~~~~~~~~i~~~t~g-g~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~  148 (174)
T d1f8fa2          70 KQLGATHVINSKTQDPVAAIKEITDG-GVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKT  148 (174)
T ss_dssp             HHHTCSEEEETTTSCHHHHHHHHTTS-CEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCE
T ss_pred             HHcCCeEEEeCCCcCHHHHHHHHcCC-CCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCE
Confidence            99999999999999999999999887 899999999985 46888999999999999987553 3457889999999999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      +.|+.+.+....       +.++++++|+++|+
T Consensus       149 i~Gs~~g~~~~~-------~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         149 ILGVVEGSGSPK-------KFIPELVRLYQQGK  174 (174)
T ss_dssp             EEECSGGGSCHH-------HHHHHHHHHHHTTS
T ss_pred             EEEEEecCCChH-------HHHHHHHHHHHcCC
Confidence            999987654321       23445888888875

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=3.6e-25  Score=181.31  Aligned_cols=135  Identities=17%  Similarity=0.202  Sum_probs=116.1

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC---
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS---   77 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~---   77 (335)
                      |||+++..++++  |++++.+.|.|+++||+|||.++|||++|++++.|.++. ..+|+++|||++|+|+++|+++.   
T Consensus         5 ~kA~v~~~~~~p--l~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~-~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           5 AHAMVLEKFNQP--LVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR-VPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT-CCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             EEEEEEecCCCC--cEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCc-cccccccceeeeeeeeEEeccccccc
Confidence            689999999877  999999999999999999999999999999999998753 34799999999999999999885   


Q ss_pred             --CCCCCCEEEEec------------------------------------CCcceeeEEEec-CCceEeCCCCCChhhhc
Q 019790           78 --RWKVGDQVCALL------------------------------------GGGGYAEKVAVP-AGQVLPVPSGVSLKDAA  118 (335)
Q Consensus        78 --~~~~Gd~V~~~~------------------------------------~~g~~~~~~~~~-~~~~~~~p~~~~~~~aa  118 (335)
                        .+++||+|....                                    .+|+|+||+.++ +..++++|+++++++  
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~--  159 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL--  159 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEE--
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHH--
Confidence              468999997421                                    158999999995 578999999998653  


Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790          119 AFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       119 ~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                          ++.+|++++ +.+.+++|++|||
T Consensus       160 ----pl~~A~~a~-~~~~~~~G~~VlI  181 (184)
T d1vj0a1         160 ----PLKEANKAL-ELMESREALKVIL  181 (184)
T ss_dssp             ----EGGGHHHHH-HHHHHTSCSCEEE
T ss_pred             ----HHHHHHHHH-HHhCCCcCCEEEE
Confidence                345677887 6678999999999

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=1.1e-27  Score=199.48  Aligned_cols=154  Identities=21%  Similarity=0.295  Sum_probs=126.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCC-------CCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEec
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQI-------KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG   73 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~-------~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG   73 (335)
                      +||++++.+++   ++++|.+.|++       .++||+||+.+++||++|++.+.|..+.  .+|+++|||++|+|+++|
T Consensus         2 ~kA~v~~~~~~---le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~--~~P~v~GHE~~G~Vv~vG   76 (201)
T d1kola1           2 NRGVVYLGSGK---VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--QVGLVLGHEITGEVIEKG   76 (201)
T ss_dssp             EEEEEEEETTE---EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCC--CTTCBCCCCEEEEEEEEC
T ss_pred             cEEEEEeCCCc---eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCccc--ccceeccceeeeeeeccc
Confidence            58999998875   99999998865       4599999999999999999999998764  479999999999999999


Q ss_pred             CCCCCCCCCCEEEEe-------------------------------------cCCcceeeEEEecCC--ceEeCCCCCCh
Q 019790           74 KNVSRWKVGDQVCAL-------------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSL  114 (335)
Q Consensus        74 ~~~~~~~~Gd~V~~~-------------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~  114 (335)
                      +++++|++||||...                                     ..+|+|+||+++|..  .++++|++.++
T Consensus        77 ~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~  156 (201)
T d1kola1          77 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  156 (201)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             cccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCCh
Confidence            999999999999631                                     014899999999853  69999998777


Q ss_pred             hhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC
Q 019790          115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV  175 (335)
Q Consensus       115 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~  175 (335)
                      .+++++..++.++++++. ..+...+    +          +| .|++|++++|+||.+|+
T Consensus       157 ~~~~~~~~~~~~~~~a~~-~~~~~~g----~----------~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         157 MEKINIAEVVGVQVISLD-DAPRGYG----E----------FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHTCCHHHHHTEEEECGG-GHHHHHH----H----------HH-HTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHH-hCCCCCe----E----------Ee-eCHHHHHHHHHHHHcCC
Confidence            777777777777777663 2322222    3          44 89999999999999886

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=6.7e-27  Score=188.72  Aligned_cols=142  Identities=23%  Similarity=0.329  Sum_probs=126.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++..|++++.+.|++++|||+|||.|+|||++|++.+.|..+.....|.++|+|++|+|++  +.+++++
T Consensus         4 ~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~~   81 (162)
T d1tt7a1           4 FQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFA   81 (162)
T ss_dssp             EEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTCC
T ss_pred             EEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccccc
Confidence            79999999999889999999999999999999999999999999999998877777789999999999998  5667899


Q ss_pred             CCCEEEEec------CCcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790           81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus        81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      +||+|+...      .+|+|+||+++|++.++++|+++++++||+++..++|||.++.. .....+++|||
T Consensus        82 ~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli  151 (162)
T d1tt7a1          82 EGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQ  151 (162)
T ss_dssp             TTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHHHTTT
T ss_pred             cceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEE
Confidence            999998764      35899999999999999999999999999999999999976532 23344567788

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=1.1e-23  Score=170.64  Aligned_cols=165  Identities=22%  Similarity=0.385  Sum_probs=140.5

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +++++||++++++.|||+++ +..++++|++|+|          +| +|++|++++|++|.+|++|+++++++++++.++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV----------~G-aG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~   68 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAI----------SG-IGGLGHVAVQYARAMGLHVAAIDIDDAKLELAR   68 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEE----------ee-ccccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence            57899999999999999999 5589999999999          88 699999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEE
Q 019790          192 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA  271 (335)
Q Consensus       192 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
                      ++|++.++|+.+.++.+.+++.+.+ ..++++++.+...+..++++++++|+++.+|.... ..+++..+++.|++++.|
T Consensus        69 ~~Ga~~~i~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~G  146 (166)
T d1llua2          69 KLGASLTVNARQEDPVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG-DFPTPIFDVVLKGLHIAG  146 (166)
T ss_dssp             HTTCSEEEETTTSCHHHHHHHHHSS-EEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEE
T ss_pred             ccCccccccccchhHHHHHHHhhcC-CcccccccccchHHHHHHHHhcCCcEEEEEEecCC-CccCCHHHHHhCCcEEEE
Confidence            9999999999999998888887754 34555555555678899999999999999997654 467888899999999999


Q ss_pred             eeccccchhhHHHHHHHHHHHHHHHHHCC
Q 019790          272 AGLRSRSTENKALIVSEVEKNVWPAIAVG  300 (335)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  300 (335)
                      +..+++.+          ++++++++++|
T Consensus       147 s~~~~~~d----------~~e~l~l~~~G  165 (166)
T d1llua2         147 SIVGTRAD----------LQEALDFAGEG  165 (166)
T ss_dssp             CCSCCHHH----------HHHHHHHHHTT
T ss_pred             EeecCHHH----------HHHHHHHHHCc
Confidence            87764321          23377888876

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.91  E-value=1.6e-24  Score=180.42  Aligned_cols=138  Identities=25%  Similarity=0.311  Sum_probs=116.3

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  |++++.+.|+|+++||+|||.++|||++|++.++|.++.  .+|.++|||++|+|+++|+++++++
T Consensus         9 ~KAavl~~~~~~--l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~--~~P~i~GHE~~G~Vv~vG~~v~~~~   84 (198)
T d2jhfa1           9 CKAAVLWEEKKP--FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT--PLPVIAGHEAAGIVESIGEGVTTVR   84 (198)
T ss_dssp             EEEEEBCSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CSSBCCCCSEEEEEEEECTTCCSCC
T ss_pred             EEEEEEecCCCC--CEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc--ccceecccceeEEEEecCccccCcC
Confidence            799999988876  999999999999999999999999999999999998765  3699999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|+...                                                ..|+|+||+++++..++++|+.+
T Consensus        85 vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~  164 (198)
T d2jhfa1          85 PGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAF  164 (198)
T ss_dssp             TTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCC
Confidence            999996521                                                12789999999999999999998


Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLV  145 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli  145 (335)
                      +++.++....+..+...+.   ..+.+|++|.|
T Consensus       165 ~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaV  194 (198)
T d2jhfa1         165 ALDPLITHVLPFEKINEGF---DLLRSGESIRT  194 (198)
T ss_dssp             CCGGGEEEEEEGGGHHHHH---HHHHTTCCSEE
T ss_pred             CHHHHHHHHHHHHhhhhCC---ceeeCCCEEEE
Confidence            8877765555544433332   23467888776

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.8e-24  Score=174.13  Aligned_cols=131  Identities=18%  Similarity=0.277  Sum_probs=110.5

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||++...+++|  |+++|.+.|+|++|||+|||.++|||++|++.+.|.++. ..+|+++|||++|+|+++|+++++|+
T Consensus         1 m~a~~~~~~~~p--l~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~-~~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG-TVYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSC--CEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCC--CEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc-ccccccccccccccchhhccccccCC
Confidence            999999999887  999999999999999999999999999999999997654 45799999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------CCcceeeEEEecCCceEeCCCCCChhhhccCcchH
Q 019790           81 VGDQVCALL------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA  124 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~  124 (335)
                      +||+|....                                    ..|+|+||+.++++.++++|+.....   .+..++
T Consensus        78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~---~~a~~l  154 (179)
T d1uufa1          78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEM---IRADQI  154 (179)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEE---ECGGGH
T ss_pred             CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcCh---hHhchh
Confidence            999995211                                    13789999999999999999654322   234567


Q ss_pred             HHHHHHHHHhcCCC
Q 019790          125 CTVWSTVFMTSHLS  138 (335)
Q Consensus       125 ~~a~~~l~~~~~~~  138 (335)
                      .++++++ ..+.++
T Consensus       155 ~~a~~a~-~~a~v~  167 (179)
T d1uufa1         155 NEAYERM-LRGDVK  167 (179)
T ss_dssp             HHHHHHH-HTTCSS
T ss_pred             HHHHHHH-HHhCcc
Confidence            7888888 445443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.90  E-value=2.6e-23  Score=169.33  Aligned_cols=169  Identities=18%  Similarity=0.225  Sum_probs=139.9

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +++++|+.++++++|+|+++ +.+++++|++|+|          +| +|++|++++|+|+.+|+ +|++++.++++++.+
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI----------~G-aG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a   68 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVV----------IG-IGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA   68 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEE----------EC-CSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEE----------Ec-CCcchhhhhhhhhcccccccccccchhhhHHHH
Confidence            57899999999999999998 6689999999999          97 69999999999999998 799999999999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccCh--hHHhhcc
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNI--TSLFAKR  266 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~--~~~~~~~  266 (335)
                      +++|+++++|+++.++.+.+++.+++.++|++|||+|+. .++.++++++++|+++.+|..... ..+++.  .....++
T Consensus        69 ~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~  148 (174)
T d1jqba2          69 KFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAH  148 (174)
T ss_dssp             HHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBC
T ss_pred             HhhCccccccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCc
Confidence            999999999999999999999999999999999999975 478899999999999999976543 222222  2234567


Q ss_pred             eEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          267 LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      +++.++.......         ..+.+.+++..|+
T Consensus       149 ~~i~g~~~~~~r~---------~~e~l~~li~~gk  174 (174)
T d1jqba2         149 KTIKGGLCPGGRL---------RAERLRDMVVYNR  174 (174)
T ss_dssp             CEEEEBCCCCHHH---------HHHHHHHHHHTTS
T ss_pred             cEEEEecCCCCcc---------cHHHHHHHHHcCC
Confidence            8888876654311         1223666776664

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=2.6e-23  Score=168.68  Aligned_cols=168  Identities=25%  Similarity=0.367  Sum_probs=144.6

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +|+++||+++++++|||+++ +..++++|++|||          +| +|++|++++++++..|++|+++++++++++.++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv----------~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k   68 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAI----------YG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK   68 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEE----------EC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEE----------ee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence            58999999999999999999 5678999999999          87 699999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEE
Q 019790          192 DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQA  271 (335)
Q Consensus       192 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (335)
                      ++|++.++++.+.++.+.+++.+.+ ..|+++++.+...+..++++++++|+++.+|.... ..+++...++.+++++.|
T Consensus        69 ~~Ga~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~-~~~~~~~~~~~~~~~i~g  146 (168)
T d1rjwa2          69 ELGADLVVNPLKEDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE-EMPIPIFDTVLNGIKIIG  146 (168)
T ss_dssp             HTTCSEEECTTTSCHHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS-EEEEEHHHHHHTTCEEEE
T ss_pred             hcCcceecccccchhhhhcccccCC-CceEEeecCCHHHHHHHHHHhccCCceEecccccC-CCCCCHHHHHHCCcEEEE
Confidence            9999999999999999999998865 45555555555668999999999999999987654 457888889999999999


Q ss_pred             eeccccchhhHHHHHHHHHHHHHHHHHCCccc
Q 019790          272 AGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  303 (335)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  303 (335)
                      +....+.          .++++++++++|+++
T Consensus       147 s~~~~~~----------~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         147 SIVGTRK----------DLQEALQFAAEGKVK  168 (168)
T ss_dssp             CCSCCHH----------HHHHHHHHHHTTSCC
T ss_pred             EeeCCHH----------HHHHHHHHHHhCCCC
Confidence            8765432          233488899999874

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.90  E-value=3e-24  Score=174.93  Aligned_cols=118  Identities=20%  Similarity=0.216  Sum_probs=101.4

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..+++   ++++|.|.|.|+++||+||+.++|||++|++.+.+.... ..+|+++|||++|+|+++|+++++|+
T Consensus         1 MKa~v~~~~~~---l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~-~~~P~i~GhE~~G~V~~vG~~v~~~~   76 (177)
T d1jqba1           1 MKGFAMLGINK---LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALG-DRKNMILGHEAVGEVVEVGSEVKDFK   76 (177)
T ss_dssp             CEEEEEEETTE---EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTC-CCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEEeCCC---eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCC-CCCCccCcceeeEEeeecccccceec
Confidence            99999998876   999999999999999999999999999999877654332 34699999999999999999999999


Q ss_pred             CCCEEEEec------------------------------CCcceeeEEEecC--CceEeCCCCCChhhhccCcc
Q 019790           81 VGDQVCALL------------------------------GGGGYAEKVAVPA--GQVLPVPSGVSLKDAAAFPE  122 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~--~~~~~~p~~~~~~~aa~~~~  122 (335)
                      +||||....                              .+|+|+||++++.  ..++++|+++++++++....
T Consensus        77 vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~  150 (177)
T d1jqba1          77 PGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY  150 (177)
T ss_dssp             TTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEE
T ss_pred             CCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHH
Confidence            999997421                              3489999999986  36899999999988765433

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.90  E-value=1.1e-22  Score=165.64  Aligned_cols=165  Identities=25%  Similarity=0.368  Sum_probs=140.7

Q ss_pred             ChhhhccCcchHHHHHHHHHHhc-CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~-~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      .+.++|+++++++|||+++.+.. .+++|++|||          +| +|++|++++|+++.+|+ +|+++++++++++.+
T Consensus         5 ~l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli----------~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~   73 (172)
T d1h2ba2           5 KLVEMAPLADAGITAYRAVKKAARTLYPGAYVAI----------VG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA   73 (172)
T ss_dssp             HHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEE----------EC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             hHHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEE----------eC-CChHHHHHHHHHHhhcCcccccccchhHHHHHH
Confidence            46788999999999999997765 5799999999          88 69999999999999997 778888899999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEE
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV  269 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  269 (335)
                      +++|++.++++.+.. .+...+.+.+.++|++|||+|+. .++.+++.++++|+++.+|...  ..++++..++.+++++
T Consensus        74 ~~~ga~~~i~~~~~~-~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~--~~~~~~~~l~~k~~~i  150 (172)
T d1h2ba2          74 ERLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG--ELRFPTIRVISSEVSF  150 (172)
T ss_dssp             HHTTCSEEEETTSCH-HHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS--CCCCCHHHHHHTTCEE
T ss_pred             hhcccceeecCcccH-HHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc--cccCCHHHHHhCCcEE
Confidence            999999999987654 45667788888999999999986 4789999999999999999643  3578888999999999


Q ss_pred             EEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          270 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      .|++..++.+          ++++++++++|+
T Consensus       151 ~Gs~~~~~~d----------~~~~l~l~~~GK  172 (172)
T d1h2ba2         151 EGSLVGNYVE----------LHELVTLALQGK  172 (172)
T ss_dssp             EECCSCCHHH----------HHHHHHHHHTTS
T ss_pred             EEEEecCHHH----------HHHHHHHHHcCC
Confidence            9998765421          233788888875

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=6.9e-23  Score=168.39  Aligned_cols=154  Identities=21%  Similarity=0.316  Sum_probs=132.0

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      +++.+|.+.++++|||+++.+..++++|++|||          +| +|++|++++|+|+++|+ +|+++++++++++.++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV----------~G-aG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~   70 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVI----------QG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE   70 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEE----------EC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEE----------EC-CCccchhheecccccccccccccccccccccccc
Confidence            356677899999999999988889999999999          98 59999999999999998 8999999999999999


Q ss_pred             HcCCCEEEeCCCccH---HHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCC-ccccCh-hHHhhc
Q 019790          192 DLGADVCINYKTEDF---VARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNI-TSLFAK  265 (335)
Q Consensus       192 ~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~-~~~~~~  265 (335)
                      ++|++.++|+.+.++   .+.+++.+.+.++|+||||+|+. .+..++++++++|+++.+|..... ..+++. ..++.|
T Consensus        71 ~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k  150 (182)
T d1vj0a2          71 EIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLK  150 (182)
T ss_dssp             HTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTT
T ss_pred             cccceEEEeccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHC
Confidence            999999999988664   45577788888999999999985 478899999999999999865433 344554 446789


Q ss_pred             ceEEEEeecccc
Q 019790          266 RLTVQAAGLRSR  277 (335)
Q Consensus       266 ~~~~~~~~~~~~  277 (335)
                      ++++.|++.+..
T Consensus       151 ~l~i~G~~~~~~  162 (182)
T d1vj0a2         151 NATFKGIWVSDT  162 (182)
T ss_dssp             TCEEEECCCCCH
T ss_pred             CcEEEEEEeCCH
Confidence            999999887653

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=7.9e-24  Score=172.42  Aligned_cols=159  Identities=18%  Similarity=0.217  Sum_probs=135.7

Q ss_pred             CChhhhccCcchHHHHHHHHH---HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~---~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      +|+.+||++++++.|||++++   +.....++++|||          +|++|++|++++|+||.+|++|+++++++++.+
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV----------~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~   70 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVV----------TGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEE----------SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEE----------EEccccchHHHHHHHHHcCCCeEEEecchhHHH
Confidence            578999999999999998764   3344455679999          999999999999999999999999999999999


Q ss_pred             HHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceE
Q 019790          189 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT  268 (335)
Q Consensus       189 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  268 (335)
                      .++++|+++++|+++.++.+.    .....+|.++|++|+..+...+++++++|+++.+|...+...+++...++.|+++
T Consensus        71 ~~~~lGad~vi~~~~~~~~~~----l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~  146 (177)
T d1o89a2          71 YLKSLGASRVLPRDEFAESRP----LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVR  146 (177)
T ss_dssp             HHHHHTEEEEEEGGGSSSCCS----SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCE
T ss_pred             HHHhhccccccccccHHHHHH----HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCccccccHHHHHHCCCe
Confidence            999999999999887655332    2334689999999999999999999999999999988877778888899999999


Q ss_pred             EEEeeccccchhhHHH
Q 019790          269 VQAAGLRSRSTENKAL  284 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~  284 (335)
                      +.|++.....+++..+
T Consensus       147 i~G~~~~~~~~~~~~~  162 (177)
T d1o89a2         147 LQGVDSVMTPPERRAQ  162 (177)
T ss_dssp             EEECCSSSCCHHHHHH
T ss_pred             EEEEecccCCHHHHHH
Confidence            9998776665554433

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.89  E-value=2.2e-22  Score=163.66  Aligned_cols=169  Identities=20%  Similarity=0.285  Sum_probs=137.5

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||.++|.+.|+|+++.+.+++++|++|+|          +| .|++|++++|+++.+|+ +|++++.++++++.++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV----------~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~   70 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAV----------FG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK   70 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEE----------EC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHH
Confidence            578999999999999999988999999999999          97 79999999999999999 7889999999999999


Q ss_pred             HcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCC-CEEEEEeccCCCccccChhHHhhcceE
Q 019790          192 DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLT  268 (335)
Q Consensus       192 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~  268 (335)
                      ++|++.++++.. ......+.+.+.+.++|++|||+|+. .+..++++++++ |+++.+|.... ..+++...++. +.+
T Consensus        71 ~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~-~~~i~~~~~~~-~k~  148 (174)
T d1e3ia2          71 ALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD-EMTIPTVDVIL-GRS  148 (174)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS-EEEEEHHHHHT-TCE
T ss_pred             HhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC-ccccchHHHhc-cCE
Confidence            999999998654 33555666666677999999999986 478899999996 99999997653 35666665543 568


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      +.|+.+.+..+.       +.+.++++++++||
T Consensus       149 i~Gs~~Gs~~~~-------~d~p~li~l~~~GK  174 (174)
T d1e3ia2         149 INGTFFGGWKSV-------DSVPNLVSDYKNKK  174 (174)
T ss_dssp             EEECSGGGCCHH-------HHHHHHHHHHHTTS
T ss_pred             EEEEEeeCCChH-------HHHHHHHHHHHCcC
Confidence            888887665332       12334777777765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.9e-22  Score=162.92  Aligned_cols=167  Identities=20%  Similarity=0.278  Sum_probs=139.3

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVC  190 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~  190 (335)
                      +|+++|| +..++++||+++ +..++++|++|+|          +| .|++|++++|+|+++|+ +|+++++++++++.+
T Consensus         1 vS~e~Aa-l~epla~a~~a~-~~~~~~~gd~VlI----------~G-~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a   67 (171)
T d1pl8a2           1 VTFEEGA-LIEPLSVGIHAC-RRGGVTLGHKVLV----------CG-AGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA   67 (171)
T ss_dssp             SCHHHHH-HHHHHHHHHHHH-HHHTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEE----------EC-CCccHHHHHHHHHHcCCceEEeccCCHHHHHHH
Confidence            4788888 557889999998 6679999999999          97 69999999999999999 899999999999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHH--HhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcce
Q 019790          191 KDLGADVCINYKTEDFVARVKE--ETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRL  267 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  267 (335)
                      +++|++++++..+.++.+..+.  .+.+.++|++|||+|+.. ++.++++++++|+++.+|.+.. ..+++...++.|++
T Consensus        68 ~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~-~~~~~~~~~~~k~l  146 (171)
T d1pl8a2          68 KEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE-MTTVPLLHAAIREV  146 (171)
T ss_dssp             HHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS-CCCCCHHHHHHTTC
T ss_pred             HHhCCcccccccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC-CCccCHHHHHHCCc
Confidence            9999999999887776544333  344568999999999865 7889999999999999997664 45788999999999


Q ss_pred             EEEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc
Q 019790          268 TVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  303 (335)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  303 (335)
                      ++.|++.+...           ++.+++++++|++.
T Consensus       147 ~i~Gs~~~~~~-----------~~~al~li~~gkid  171 (171)
T d1pl8a2         147 DIKGVFRYCNT-----------WPVAISMLASKSVN  171 (171)
T ss_dssp             EEEECCSCSSC-----------HHHHHHHHHTTSCC
T ss_pred             EEEEEeCCHhH-----------HHHHHHHHHcCCCC
Confidence            99998654221           22388899998763

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=1e-25  Score=184.37  Aligned_cols=156  Identities=24%  Similarity=0.266  Sum_probs=128.8

Q ss_pred             CEEEEEcCCCCCc-c--eEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCC---------CCCCCCCCCceEEE
Q 019790            1 MKAIVITQPGSPE-V--LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---------KGASPYPGLECSGT   68 (335)
Q Consensus         1 mka~~~~~~~~~~-~--l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~---------~~~p~~~G~e~~G~   68 (335)
                      |||++++++|+|+ .  ++..+.|.|+|+++||+|||.+++||++|++.+.|..+..         ...|.++|+|++|+
T Consensus         4 ~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~   83 (175)
T d1gu7a1           4 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFE   83 (175)
T ss_dssp             EEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEE
T ss_pred             eEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccc
Confidence            6999999999873 3  4555677788899999999999999999999998875432         24577899999999


Q ss_pred             EEEecCCCCCCCCCCEEEEecC-CcceeeEEEecCCceEeCCCCCChhhhccCcchHHHHHHHHHH-hcCCCCCCEEEEe
Q 019790           69 ILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM-TSHLSPGESFLVD  146 (335)
Q Consensus        69 V~~vG~~~~~~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~a~~~l~~-~~~~~~~~~vli~  146 (335)
                      |+++|.++..++.||+|..... .|+|+||+.++++.++++|++++.+.  ++....+|||+++.. ..++++|+++|| 
T Consensus        84 V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~iP~~~~~~~--a~~~~~~ta~~~l~~~~~~~~~g~~vli-  160 (175)
T d1gu7a1          84 VIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQ-  160 (175)
T ss_dssp             EEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEECCHHHHHH--TTCSCCCCCCCCEEEECCSSSCHHHHHH-
T ss_pred             cccccccccccccccceeccccccccccceeeehhhhccCCCccchhhh--hccchHHHHHHHHHHHhcCCCCCCEEEE-
Confidence            9999999999999999986543 48899999999999999999765444  355677888888753 467999999999 


Q ss_pred             ecccccccccc-ccchHHHHHHH
Q 019790          147 FCSISYSDVHG-GSSGIGTFAIQ  168 (335)
Q Consensus       147 ~~~~~~~~~~g-~~g~~G~~a~~  168 (335)
                               +| |+|++|.+++|
T Consensus       161 ---------~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         161 ---------DGVANSKDGKQLIT  174 (175)
T ss_dssp             ---------HHHHTGGGSCEEEE
T ss_pred             ---------ECccchhhhheEEe
Confidence                     87 45779987765

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.89  E-value=3.4e-22  Score=162.72  Aligned_cols=168  Identities=21%  Similarity=0.259  Sum_probs=134.4

Q ss_pred             hhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH
Q 019790          114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD  192 (335)
Q Consensus       114 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~  192 (335)
                      |.+||.+.|.+.|+|+++.+.+++++|++|+|          +| .|++|++++|+++.+|+ +|+++++++++++.+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV----------~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~   70 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAV----------FG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE   70 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEE----------EC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHH
Confidence            46789999999999999988899999999999          97 69999999999999997 79999999999999999


Q ss_pred             cCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccC-CCEEEEEeccCCC-ccccChhHHhhcceE
Q 019790          193 LGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI-DGRLFIIGTQGGA-KTELNITSLFAKRLT  268 (335)
Q Consensus       193 ~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~-~G~~v~~g~~~~~-~~~~~~~~~~~~~~~  268 (335)
                      +|++.++|+++.+ +.....+.+.++++|++|||+|+.. +...+..+.+ +|+++.+|..... ..+++... +.++.+
T Consensus        71 lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~~  149 (174)
T d1p0fa2          71 LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLL-LLTGRS  149 (174)
T ss_dssp             TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHH-HHTTCE
T ss_pred             cCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHH-HhCCCE
Confidence            9999999876544 4455666666679999999999865 5677777766 5999999976543 33444433 446789


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      +.|+.+.++..++.        +++++++.+|+
T Consensus       150 i~Gs~~G~~~~~d~--------~~lidl~~~gK  174 (174)
T d1p0fa2         150 LKGSVFGGFKGEEV--------SRLVDDYMKKK  174 (174)
T ss_dssp             EEECSGGGCCGGGH--------HHHHHHHHTTS
T ss_pred             EEEEEeCCCCHHHH--------HHHHHHHHcCC
Confidence            99998776543332        22778887774

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.89  E-value=4.9e-22  Score=161.41  Aligned_cols=164  Identities=23%  Similarity=0.328  Sum_probs=133.3

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +|+++|| +..++++||+++ +..++++|++|+|          +| +|++|++++|+|+.+|++|+++++++++++.++
T Consensus         1 VS~e~Aa-l~ePla~a~~a~-~~~~~~~g~~vlV----------~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~   67 (170)
T d1e3ja2           1 VSLEEGA-LLEPLSVGVHAC-RRAGVQLGTTVLV----------IG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK   67 (170)
T ss_dssp             SCHHHHH-THHHHHHHHHHH-HHHTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEE----------Ec-ccccchhhHhhHhhhcccccccchHHHHHHHHH
Confidence            4788888 567889999999 6678999999999          97 799999999999999999999999999999999


Q ss_pred             HcCCCEEEeCCC--ccH---HHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhc
Q 019790          192 DLGADVCINYKT--EDF---VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK  265 (335)
Q Consensus       192 ~~g~~~~~~~~~--~~~---~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  265 (335)
                      ++|++..++.+.  .+.   .+.+++. .+.++|++|||+|+.. +..++++++++|+++.+|..... .++++..++.|
T Consensus        68 ~~ga~~~~~~~~~~~~~~~~~~~~~~~-~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~-~~~~~~~~~~k  145 (170)
T d1e3ja2          68 NCGADVTLVVDPAKEEESSIIERIRSA-IGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQM-VTVPLVNACAR  145 (170)
T ss_dssp             HTTCSEEEECCTTTSCHHHHHHHHHHH-SSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSC-CCCCHHHHHTT
T ss_pred             HcCCcEEEeccccccccchhhhhhhcc-cccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCC-CCcCHHHHHHC
Confidence            999988765543  332   2334333 4568999999999865 78899999999999999976543 57888899999


Q ss_pred             ceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          266 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      ++++.|++.+...           ++.+++++++|+
T Consensus       146 ~i~i~gs~~~~~~-----------~~~ai~li~~Gk  170 (170)
T d1e3ja2         146 EIDIKSVFRYCND-----------YPIALEMVASGR  170 (170)
T ss_dssp             TCEEEECCSCSSC-----------HHHHHHHHHTTS
T ss_pred             CCEEEEEECCHHH-----------HHHHHHHHHcCC
Confidence            9999998654321           122778888774

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.7e-22  Score=166.67  Aligned_cols=173  Identities=22%  Similarity=0.277  Sum_probs=134.2

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCC--CEEEEeeccccccccccccchHHHHHHHHHhhCCCe-EEEEecChhhHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPG--ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLA  188 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~--~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~-V~~~~~~~~~~~  188 (335)
                      +|+.+.| +++++.|||++|....++++|  ++|||          +|++|++|++++|+||..|++ |++++.++++..
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI----------~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~   70 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVV----------SGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCL   70 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEE----------SSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHH
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEE----------ECCCchhhHHHHHHHHHcCCcceecccchHHHHh
Confidence            4555655 888999999999999999987  88999          999999999999999999995 555666766655


Q ss_pred             HH-HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCcc------ccC---
Q 019790          189 VC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT------ELN---  258 (335)
Q Consensus       189 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~---  258 (335)
                      .+ +++|++.++|+.+.++.+.+++.+. .++|++||++|++.+...+++++++|+++.+|...+...      ...   
T Consensus        71 ~l~~~~gad~vi~~~~~~~~~~~~~~~~-~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~  149 (187)
T d1vj1a2          71 FLTSELGFDAAVNYKTGNVAEQLREACP-GGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAV  149 (187)
T ss_dssp             HHHHHSCCSEEEETTSSCHHHHHHHHCT-TCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHH
T ss_pred             hhhhcccceEEeeccchhHHHHHHHHhc-cCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHH
Confidence            44 5799999999999999999999885 689999999999999999999999999999987554211      111   


Q ss_pred             hhHHhhcceEEEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          259 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      ...+..+++++.++.+..+..     ...+.++++.+|+.+|+
T Consensus       150 ~~~~~~k~i~~~g~~~~~~~~-----~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         150 EAIRKERNITRERFTVLNYKD-----KFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             HHHHHHTTCEEEECCGGGCGG-----GHHHHHHHHHHHHHHTS
T ss_pred             HHHHHhcceEEEEeEecchHH-----HHHHHHHHHHHHHHCcC
Confidence            233456889999887654432     12345666888888875

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.89  E-value=1.8e-22  Score=167.55  Aligned_cols=121  Identities=26%  Similarity=0.286  Sum_probs=106.8

Q ss_pred             CEEEEEcCCCCCcceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCCCCC
Q 019790            1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK   80 (335)
Q Consensus         1 mka~~~~~~~~~~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~   80 (335)
                      |||+++..++++  |+++|.+.|+|+++||+|||.++|||++|++.+.|..+.  .+|.++|||++|+|+++|+++.+|+
T Consensus         9 ~KAav~~~~g~~--l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~--~~P~i~GHE~~G~Vv~~G~~v~~~~   84 (198)
T d1p0fa1           9 CKAAVAWEPHKP--LSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS--KFPVILGHEAVGVVESIGAGVTCVK   84 (198)
T ss_dssp             EEEEEBSSTTSC--CEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC--CSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             EEEEEEccCCCC--CEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc--ccccccceeeeeeeeecCcccccCc
Confidence            899999999876  999999999999999999999999999999999998754  5799999999999999999999999


Q ss_pred             CCCEEEEec------------------------------------------------CCcceeeEEEecCCceEeCCCCC
Q 019790           81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV  112 (335)
Q Consensus        81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~  112 (335)
                      +||+|+...                                                .+|+|+||+.++...++++|+++
T Consensus        85 ~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~  164 (198)
T d1p0fa1          85 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKI  164 (198)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTS
T ss_pred             CCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCC
Confidence            999997521                                                02679999999999999999999


Q ss_pred             ChhhhccCcchHH
Q 019790          113 SLKDAAAFPEVAC  125 (335)
Q Consensus       113 ~~~~aa~~~~~~~  125 (335)
                      +.+..+.......
T Consensus       165 ~~~~~~~~~~~~~  177 (198)
T d1p0fa1         165 NVNFLVSTKLTLD  177 (198)
T ss_dssp             CGGGGEEEEECGG
T ss_pred             CHHHHHHhhcchh
Confidence            9887765544433

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.2e-22  Score=164.74  Aligned_cols=150  Identities=23%  Similarity=0.325  Sum_probs=126.1

Q ss_pred             CCChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       111 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      ..+++.+|++.|+..|+|+++ +..++++|++|+|          +| .|++|++++|+|+++|++++++++++++++.+
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI----------~G-aG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a   70 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGV----------VG-IGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA   70 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEE----------ec-cchHHHHHHHHhhcccccchhhccchhHHHHH
Confidence            367888899999999999999 6789999999999          98 69999999999999999999999999999999


Q ss_pred             HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEE
Q 019790          191 KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV  269 (335)
Q Consensus       191 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  269 (335)
                      +++|++.++|+.+....     ....+++|++|||+|+. .+..+++.++++|+++.+|........++...++.+++++
T Consensus        71 ~~lGad~~i~~~~~~~~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i  145 (168)
T d1uufa2          71 KALGADEVVNSRNADEM-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAI  145 (168)
T ss_dssp             HHHTCSEEEETTCHHHH-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEE
T ss_pred             hccCCcEEEECchhhHH-----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEE
Confidence            99999999998875432     23346899999999985 4899999999999999999876655667888888999999


Q ss_pred             EEeecccc
Q 019790          270 QAAGLRSR  277 (335)
Q Consensus       270 ~~~~~~~~  277 (335)
                      .|+..++.
T Consensus       146 ~Gs~~~~~  153 (168)
T d1uufa2         146 AGSMIGGI  153 (168)
T ss_dssp             EECCSCCH
T ss_pred             EEEeecCH
Confidence            99987653

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=6.5e-23  Score=166.30  Aligned_cols=163  Identities=21%  Similarity=0.274  Sum_probs=134.7

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  192 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~  192 (335)
                      +++.||++.|++.|+|+++ +..++++|++|+|          +| .|++|++++|+|+.+|++|+++++++++++.+++
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI----------~G-aG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~   69 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGI----------VG-LGGIGSMGTLISKAMGAETYVISRSSRKREDAMK   69 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEE----------EC-CSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEE----------EC-CCCcchhHHHHhhhccccccccccchhHHHHhhc
Confidence            4578899999999999999 4679999999999          98 5999999999999999999999999999999999


Q ss_pred             cCCCEEEeCCCc-cHHHHHHHHhCCCcccEEEeCCChhh---HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceE
Q 019790          193 LGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASY---FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLT  268 (335)
Q Consensus       193 ~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  268 (335)
                      +|+++++++.+. ++.+    .. ..++|.++||+++..   +..+++.++++|+++.+|..... ..++...++.|+++
T Consensus        70 lGa~~~i~~~~~~~~~~----~~-~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~  143 (168)
T d1piwa2          70 MGADHYIATLEEGDWGE----KY-FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH-EMLSLKPYGLKAVS  143 (168)
T ss_dssp             HTCSEEEEGGGTSCHHH----HS-CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS-CCEEECGGGCBSCE
T ss_pred             cCCcEEeeccchHHHHH----hh-hcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc-ccccHHHHHhCCcE
Confidence            999999987654 3322    22 247999999988643   67889999999999999976543 46777788899999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCccc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK  303 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  303 (335)
                      +.|+...+..          .++++++++++|+++
T Consensus       144 i~Gs~~g~~~----------~~~e~l~li~~gkIk  168 (168)
T d1piwa2         144 ISYSALGSIK----------ELNQLLKLVSEKDIK  168 (168)
T ss_dssp             EEECCCCCHH----------HHHHHHHHHHHTTCC
T ss_pred             EEEEeeCCHH----------HHHHHHHHHHhCCCC
Confidence            9998776532          123388899888874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.88  E-value=1.8e-21  Score=158.86  Aligned_cols=171  Identities=19%  Similarity=0.235  Sum_probs=133.5

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||.++|++.|+|+++.+.+++++|++|||          +| .|++|++++|+++.+|+ +|+++++++++++.++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI----------~G-aGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak   70 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAV----------FG-LGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK   70 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEE----------ec-chhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH
Confidence            578999999999999999988899999999999          88 58999999999999997 7888888999999999


Q ss_pred             HcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCC-ccccChhHHhhcceE
Q 019790          192 DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT  268 (335)
Q Consensus       192 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~  268 (335)
                      ++|+++++|+.+ .+......+.+.+.++|++||++|+.. +..+...++++|+++.++..... ....+....+.++.+
T Consensus        71 ~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~  150 (176)
T d2fzwa2          71 EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRT  150 (176)
T ss_dssp             HHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCE
T ss_pred             HhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCE
Confidence            999999998854 333444445555669999999999865 57788888988888877554433 223333444567889


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      +.|+.+.+....       +.+.++++++++||
T Consensus       151 i~Gs~~G~~~~~-------~d~~~li~l~~~GK  176 (176)
T d2fzwa2         151 WKGTAFGGWKSV-------ESVPKLVSEYMSKK  176 (176)
T ss_dssp             EEECSGGGCCHH-------HHHHHHHHHHHTTS
T ss_pred             EEEEeeeCCcHH-------HHHHHHHHHHHcCC
Confidence            999987665321       12334788888875

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.87  E-value=4.5e-21  Score=156.36  Aligned_cols=171  Identities=16%  Similarity=0.155  Sum_probs=137.2

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||.++|++.|+|+++.+.+++++|++|+|          +| .|++|++++++++..|+ +|+++++++++++.++
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI----------~G-~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~   70 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAV----------FG-LGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK   70 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEE----------Ee-cCCccchHHHHHHHHhhchheeecchHHHHHHHH
Confidence            578999999999999999988899999999999          87 69999999999999987 7999999999999999


Q ss_pred             HcCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEE
Q 019790          192 DLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV  269 (335)
Q Consensus       192 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  269 (335)
                      ++|+++++|+.+.+ +.+..++.+.++++|++||++|+.. +..++..++++|.++.++.........+...++.++.++
T Consensus        71 ~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i  150 (175)
T d1cdoa2          71 VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTW  150 (175)
T ss_dssp             HTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEE
T ss_pred             HcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEE
Confidence            99999999987643 5567777777789999999999865 567778877776665554444444455566667788999


Q ss_pred             EEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          270 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      .|+.+......       +.+.++++++.+|+
T Consensus       151 ~Gs~~G~~~~~-------~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         151 KGSMFGGFKGK-------DGVPKMVKAYLDKK  175 (175)
T ss_dssp             EECSGGGCCHH-------HHHHHHHHHHHTTS
T ss_pred             EEEEEeCCcHH-------HHHHHHHHHHHcCC
Confidence            99987665321       22334778888775

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.87  E-value=1.1e-22  Score=163.92  Aligned_cols=146  Identities=17%  Similarity=0.221  Sum_probs=123.4

Q ss_pred             chHHHHHHH---HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          122 EVACTVWST---VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       122 ~~~~~a~~~---l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      +++.|||.+   |.+.....++++|||          +|++|++|.+++|+||.+|++|+++++++++.+.++++|++.+
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV----------~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~v   72 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLV----------TGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEV   72 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEE----------ESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEE
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEE----------eCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccce
Confidence            345677754   545556677889999          9999999999999999999999999999999999999999999


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEeccCCCccccChhHHhhcceEEEEeeccccc
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS  278 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (335)
                      +++++..  ....+.+.++++|++||++|++.+...+++|+++|+++.+|...+...+++...++.|++++.|.......
T Consensus        73 i~~~~~~--~~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~  150 (167)
T d1tt7a2          73 ISREDVY--DGTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCP  150 (167)
T ss_dssp             EEHHHHC--SSCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCC
T ss_pred             Eeccchh--chhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCC
Confidence            8864321  22334466778999999999999999999999999999999998887888999999999999998665544


Q ss_pred             h
Q 019790          279 T  279 (335)
Q Consensus       279 ~  279 (335)
                      .
T Consensus       151 ~  151 (167)
T d1tt7a2         151 M  151 (167)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.86  E-value=1.2e-20  Score=153.97  Aligned_cols=171  Identities=18%  Similarity=0.188  Sum_probs=135.0

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||.++|++.|+|+++.+.+++++|++|||          +|+ |++|++++++++..|+ +|+++++++++++.++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV----------~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~   70 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAV----------FGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK   70 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEE----------ECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEE----------ECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH
Confidence            578999999999999999988999999999999          985 8899999999999986 8999999999999999


Q ss_pred             HcCCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEeccCC-CccccChhHHhhcceE
Q 019790          192 DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLT  268 (335)
Q Consensus       192 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~  268 (335)
                      ++|+++++++.+ .+......+.+.+.++|++|||+|... +..++..++++|+.+.++.... .........++.++++
T Consensus        71 ~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (176)
T d2jhfa2          71 EVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRT  150 (176)
T ss_dssp             HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCE
T ss_pred             HhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCE
Confidence            999999988754 445556666677779999999999865 5778888988765555554443 3333334456678999


Q ss_pred             EEEeeccccchhhHHHHHHHHHHHHHHHHHCCc
Q 019790          269 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK  301 (335)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  301 (335)
                      +.|+.+.+..+.+       .++++++++.+||
T Consensus       151 i~Gs~~G~~~~~~-------~~~~li~~~~~GK  176 (176)
T d2jhfa2         151 WKGAIFGGFKSKD-------SVPKLVADFMAKK  176 (176)
T ss_dssp             EEECSGGGCCHHH-------HHHHHHHHHHTTS
T ss_pred             EEEEEEeCCCHHH-------HHHHHHHHHHCcC
Confidence            9999876553221       2333777777775

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.86  E-value=1e-20  Score=154.02  Aligned_cols=155  Identities=19%  Similarity=0.253  Sum_probs=129.6

Q ss_pred             ChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH
Q 019790          113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK  191 (335)
Q Consensus       113 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~  191 (335)
                      ++++||.++|.+.|+|+++.+.+++++|++|+|          +| .|++|++++|+++.+|+ +|++++.++++++.++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI----------~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak   71 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV----------FG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM   71 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEE----------EC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHH
Confidence            589999999999999999988899999999999          87 79999999999999996 8999999999999999


Q ss_pred             HcCCCEEEeCCCcc-HHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccC-CCEEEEEeccCCCc-cccChhHHhhcce
Q 019790          192 DLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNI-DGRLFIIGTQGGAK-TELNITSLFAKRL  267 (335)
Q Consensus       192 ~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~-~G~~v~~g~~~~~~-~~~~~~~~~~~~~  267 (335)
                      ++|+++++|+.+.+ ..+.+.+.+.+.++|++||++|+.. +..++..+.+ +|+++.+|...... ..+++.. +.++.
T Consensus        72 ~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~-~~~~~  150 (176)
T d1d1ta2          72 AVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPML-LFTGR  150 (176)
T ss_dssp             HHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHH-HHTTC
T ss_pred             hcCCcEEECccccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHH-HhCCC
Confidence            99999999987654 4566777788889999999999865 5666766655 59999999766542 3444444 44678


Q ss_pred             EEEEeeccccch
Q 019790          268 TVQAAGLRSRST  279 (335)
Q Consensus       268 ~~~~~~~~~~~~  279 (335)
                      ++.|+.+....+
T Consensus       151 ~i~Gs~~G~~~~  162 (176)
T d1d1ta2         151 TWKGCVFGGLKS  162 (176)
T ss_dssp             EEEECSGGGCCH
T ss_pred             EEEEEEEeCCCc
Confidence            999998776543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.84  E-value=4.2e-20  Score=152.78  Aligned_cols=145  Identities=18%  Similarity=0.247  Sum_probs=126.8

Q ss_pred             hhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc
Q 019790          115 KDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL  193 (335)
Q Consensus       115 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~  193 (335)
                      ++.++|..+++|||+++ +.+++++|++|||          +| +|++|++++++|+.+|+ +|++++.++++++.++++
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV----------~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~   69 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYV----------AG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ   69 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEE----------EC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhc
Confidence            46677999999999998 6789999999999          97 69999999999999998 899999999999999999


Q ss_pred             CCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCCh----------------hhHHHhhccccCCCEEEEEeccCCCc---
Q 019790          194 GADVCINYKTEDFVARVKEETGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQGGAK---  254 (335)
Q Consensus       194 g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~---  254 (335)
                      |+++++++.+.++.+.+.+.+++.++|++|||+|.                +.++.+++.++++|+++++|.+....   
T Consensus        70 Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~  149 (195)
T d1kola2          70 GFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGA  149 (195)
T ss_dssp             TCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTC
T ss_pred             cccEEEeCCCcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccc
Confidence            99999999999999999999999999999999984                35788999999999999999765431   


Q ss_pred             ---------cccChhHHhhcceEEEE
Q 019790          255 ---------TELNITSLFAKRLTVQA  271 (335)
Q Consensus       255 ---------~~~~~~~~~~~~~~~~~  271 (335)
                               .++++..++.|++++.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~k~~~i~~  175 (195)
T d1kola2         150 VDAAAKIGSLSIRFGLGWAKSHSFHT  175 (195)
T ss_dssp             SSHHHHTTCCCCCHHHHHHTTCEEEE
T ss_pred             hhhhhhcCceeeeHHHHHhhcceecc
Confidence                     23555666778888754

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.66  E-value=2.1e-15  Score=117.73  Aligned_cols=132  Identities=14%  Similarity=0.165  Sum_probs=99.6

Q ss_pred             EEEEEcCC--CCC--cceEEEeecCCCCCCCcEEEEEEEeecCcchhhhhcCCCCCCCCCCCCCCCceEEEEEEecCCCC
Q 019790            2 KAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS   77 (335)
Q Consensus         2 ka~~~~~~--~~~--~~l~~~~~~~~~~~~~eVlI~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~   77 (335)
                      |+|++.+.  |.|  ++|++++.+.|.|++|||+||++|.++++..+....   +.+.  ...+..+.+|+|++  ++++
T Consensus         5 k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~---~~~~--g~~~~g~~vg~Vv~--S~~~   77 (147)
T d1v3va1           5 KSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK---RLKE--GAVMMGQQVARVVE--SKNS   77 (147)
T ss_dssp             EEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG---GSCT--TSBCCCCEEEEEEE--ESCT
T ss_pred             EEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccc---cccc--CCccccceEEEEEE--eCCC
Confidence            67887765  444  679999999999999999999999999886544322   1211  22355578999998  6778


Q ss_pred             CCCCCCEEEEecCCcceeeEEEecCCceEeCCCCCChh-----hhccCcchHHHH-HHHHHHhcCCCCCCEEEE
Q 019790           78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK-----DAAAFPEVACTV-WSTVFMTSHLSPGESFLV  145 (335)
Q Consensus        78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~-----~aa~~~~~~~~a-~~~l~~~~~~~~~~~vli  145 (335)
                      +|++||+|++.   ++|+||.+++.+.+.++|+..+..     ..+++....+|| |..+..  .-+.|++||+
T Consensus        78 ~f~~GD~V~g~---~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~k~Getvv~  146 (147)
T d1v3va1          78 AFPAGSIVLAQ---SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GANLGKAVVT  146 (147)
T ss_dssp             TSCTTCEEEEC---CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TCCSSEEEEE
T ss_pred             cccCCCEEEEc---cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhC--CCCCCCEEEe
Confidence            89999999987   789999999999999998765432     344567777774 545633  3467999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.46  E-value=5.9e-14  Score=96.14  Aligned_cols=74  Identities=23%  Similarity=0.304  Sum_probs=67.6

Q ss_pred             CChhhhccCcchHHHHHHHHH---HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVF---MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~---~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      +|+++|++++.++.|||.+++   +....++++++||          +|++|++|.+++|+++.+|++|+++++++++.+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI----------~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~   70 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVV----------TGASGGVGSTAVALLHKLGYQVVAVSGRESTHE   70 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEE----------SSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEE----------EeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence            578999999999999998765   4456789999999          999999999999999999999999999999999


Q ss_pred             HHHHcCC
Q 019790          189 VCKDLGA  195 (335)
Q Consensus       189 ~~~~~g~  195 (335)
                      +++++|+
T Consensus        71 ~~~~lGA   77 (77)
T d1o8ca2          71 YLKSLGA   77 (77)
T ss_dssp             HHHHHTE
T ss_pred             HHHHCCC
Confidence            9999874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.62  E-value=0.00018  Score=56.22  Aligned_cols=95  Identities=16%  Similarity=0.166  Sum_probs=70.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeC-C-------------------CccHHHHHHHHhC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-K-------------------TEDFVARVKEETG  215 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~-~-------------------~~~~~~~~~~~~~  215 (335)
                      +| .|..|+.|+..|+.+|++|.+.+.+.++++++++++...+.-. .                   .....+.+.+...
T Consensus        35 iG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l~~~l~  113 (183)
T d1l7da1          35 FG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELV  113 (183)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHHHHT
T ss_pred             Ec-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHHHHHHHH
Confidence            77 7999999999999999999999999999999999886553110 0                   0112344555443


Q ss_pred             CCcccEEEeCC---Chh----hHHHhhccccCCCEEEEEeccCCC
Q 019790          216 GKGVDVILDCM---GAS----YFQRNLGSLNIDGRLFIIGTQGGA  253 (335)
Q Consensus       216 ~~~~d~vid~~---g~~----~~~~~~~~l~~~G~~v~~g~~~~~  253 (335)
                        ..|+||-++   |..    ....+++.|++++.++.+....+.
T Consensus       114 --~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGG  156 (183)
T d1l7da1         114 --KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG  156 (183)
T ss_dssp             --TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTC
T ss_pred             --hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCC
Confidence              589999876   222    137889999999999998655544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.55  E-value=0.00026  Score=54.44  Aligned_cols=91  Identities=13%  Similarity=0.147  Sum_probs=66.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC-C-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCC---hh-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-A-DVCINYKTEDFVARVKEETGGKGVDVILDCMG---AS-  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g-~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g---~~-  229 (335)
                      +| .|..|+.+++.|+.+|++|++.+.+.++++++++.. . ......+..    .+.+...  ..|+||.++=   .. 
T Consensus        38 iG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~----~l~~~~~--~aDivI~aalipG~~a  110 (168)
T d1pjca1          38 LG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA----EIETAVA--EADLLIGAVLVPGRRA  110 (168)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH----HHHHHHH--TCSEEEECCCCTTSSC
T ss_pred             EC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhh----hHHHhhc--cCcEEEEeeecCCccc
Confidence            77 799999999999999999999999999999887643 2 222222222    2333332  4899999773   21 


Q ss_pred             ---hHHHhhccccCCCEEEEEeccCCC
Q 019790          230 ---YFQRNLGSLNIDGRLFIIGTQGGA  253 (335)
Q Consensus       230 ---~~~~~~~~l~~~G~~v~~g~~~~~  253 (335)
                         ....+++.|++++.++.+....+.
T Consensus       111 P~lIt~~mv~~Mk~GSVIVDvaidqGG  137 (168)
T d1pjca1         111 PILVPASLVEQMRTGSVIVDVAVDQGG  137 (168)
T ss_dssp             CCCBCHHHHTTSCTTCEEEETTCTTCC
T ss_pred             CeeecHHHHhhcCCCcEEEEeecCCCC
Confidence               137889999999999998654443

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.43  E-value=6.5e-05  Score=61.02  Aligned_cols=110  Identities=21%  Similarity=0.232  Sum_probs=74.5

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcC
Q 019790          119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLG  194 (335)
Q Consensus       119 ~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g  194 (335)
                      .+..+...|.  +....+++++++||.          .|  ++.|..++.+++..|.+|+.++.+++-.+.++    +++
T Consensus        60 ~is~P~~~a~--ml~~L~l~~g~~VLe----------IG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g  125 (215)
T d1jg1a_          60 TVSAPHMVAI--MLEIANLKPGMNILE----------VG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAG  125 (215)
T ss_dssp             EECCHHHHHH--HHHHHTCCTTCCEEE----------EC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTT
T ss_pred             hhhhhhhHHH--HHHhhccCccceEEE----------ec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcC
Confidence            3444544444  236678999999999          87  66788888889888888999998877655554    456


Q ss_pred             CCEEE-eCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEE
Q 019790          195 ADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  247 (335)
Q Consensus       195 ~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (335)
                      .+.+. ...+..     ..+....+||.|+-+.+.... ...+++|+++|+++..
T Consensus       126 ~~nv~~~~gd~~-----~g~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         126 VKNVHVILGDGS-----KGFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             CCSEEEEESCGG-----GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             CceeEEEECccc-----cCCcccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence            44332 222111     111223589999987766543 5678999999999875

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.36  E-value=0.001  Score=52.65  Aligned_cols=77  Identities=14%  Similarity=0.194  Sum_probs=57.4

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-----cC-CCEEEeCCCccHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LG-ADVCINYKTEDFVARV  210 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-----~g-~~~~~~~~~~~~~~~~  210 (335)
                      --.|.++||          +|+++++|..++..+...|++|++++|+.++.+.+.+     .. .....|..+.   +.+
T Consensus        20 ~l~gK~vlI----------tGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~   86 (191)
T d1luaa1          20 SVKGKKAVV----------LAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD---ASR   86 (191)
T ss_dssp             CCTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH---HHH
T ss_pred             CCCCCEEEE----------ECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH---HHH
Confidence            347889999          9999999999999999999999999999988766642     22 2233444432   344


Q ss_pred             HHHhCCCcccEEEeCCCh
Q 019790          211 KEETGGKGVDVILDCMGA  228 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~  228 (335)
                      .+..+  ++|++|+|+|.
T Consensus        87 ~~~~~--~iDilin~Ag~  102 (191)
T d1luaa1          87 AEAVK--GAHFVFTAGAI  102 (191)
T ss_dssp             HHHTT--TCSEEEECCCT
T ss_pred             HHHhc--CcCeeeecCcc
Confidence            44443  68999999874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.28  E-value=9e-05  Score=62.28  Aligned_cols=100  Identities=21%  Similarity=0.343  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCC--CEEEeCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGA--DVCINYK  202 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~--~~~~~~~  202 (335)
                      +....+++||++||-          .|  .+.|..+..+|+..|  .+|+.++.+++..+.+++    .+.  ...+...
T Consensus        95 Ii~~l~i~pG~~VLD----------iG--~GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~  162 (266)
T d1o54a_          95 IAMMLDVKEGDRIID----------TG--VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR  162 (266)
T ss_dssp             HHHHTTCCTTCEEEE----------EC--CTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC
T ss_pred             HHHhhCCCCCCEEEE----------CC--CCCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec
Confidence            446789999999999          76  445888888898875  699999999998877753    443  2222222


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +  .    .+......+|.|+--++.  ..+..+.+.|+|+|+++.+.
T Consensus       163 d--~----~~~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         163 D--I----SEGFDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             C--G----GGCCSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             c--c----cccccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            2  1    122334568887766655  34788999999999998764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.0016  Score=53.63  Aligned_cols=79  Identities=19%  Similarity=0.247  Sum_probs=58.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE--EeCCCccHHHHHHHHh
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC--INYKTEDFVARVKEET  214 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~~~~~~~  214 (335)
                      -.|.++||          +|+++++|.+.++.+...|++|+++.+++++.+.+. +++....  .|-.+.+..+++.+..
T Consensus         5 L~GK~~lI----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   74 (244)
T d1pr9a_           5 LAGRRVLV----------TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV   74 (244)
T ss_dssp             CTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHh
Confidence            36889999          999999999999999999999999999999887765 4443332  3444433333333333


Q ss_pred             CCCcccEEEeCCCh
Q 019790          215 GGKGVDVILDCMGA  228 (335)
Q Consensus       215 ~~~~~d~vid~~g~  228 (335)
                        +++|++++++|.
T Consensus        75 --g~iDilVnnAg~   86 (244)
T d1pr9a_          75 --GPVDLLVNNAAV   86 (244)
T ss_dssp             --CCCCEEEECCCC
T ss_pred             --CCceEEEecccc
Confidence              369999998863

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.17  E-value=0.002  Score=52.92  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=56.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE--eCCCccHHHHHHHHhC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVARVKEETG  215 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~~~~  215 (335)
                      .|.++||          +|+++++|.++++.+...|++|+++.+++++.+.+. +.+....+  |-.+.+..+++.+.. 
T Consensus         4 ~GK~alI----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-   72 (242)
T d1cyda_           4 SGLRALV----------TGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI-   72 (242)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC-
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc-
Confidence            5789999          999999999999999999999999999988877665 44433323  333333333333333 


Q ss_pred             CCcccEEEeCCC
Q 019790          216 GKGVDVILDCMG  227 (335)
Q Consensus       216 ~~~~d~vid~~g  227 (335)
                       +++|++++++|
T Consensus        73 -g~iDilVnnAg   83 (242)
T d1cyda_          73 -GPVDLLVNNAA   83 (242)
T ss_dssp             -CCCSEEEECCC
T ss_pred             -CCCeEEEECCc
Confidence             47999999887

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.12  E-value=0.0017  Score=53.35  Aligned_cols=77  Identities=19%  Similarity=0.320  Sum_probs=56.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEE-EeCCCcc----HHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTED----FVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~----~~~~~~~  212 (335)
                      +|.++||          +||++++|.+.++.+...|++|+++.+++++.+.+.+ ++...+ .|-.+.+    +.+.+.+
T Consensus         4 ~gK~~lI----------TGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           4 KDKAVLI----------TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHH
Confidence            4788999          9999999999999999999999999999988877754 444332 2333322    2233333


Q ss_pred             HhCCCcccEEEeCCC
Q 019790          213 ETGGKGVDVILDCMG  227 (335)
Q Consensus       213 ~~~~~~~d~vid~~g  227 (335)
                      ..+  ++|++++++|
T Consensus        74 ~~g--~iDilVnnAG   86 (242)
T d1ulsa_          74 HLG--RLDGVVHYAG   86 (242)
T ss_dssp             HHS--SCCEEEECCC
T ss_pred             hcC--CceEEEECCc
Confidence            333  6999999887

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.0015  Score=53.97  Aligned_cols=77  Identities=23%  Similarity=0.330  Sum_probs=56.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-EEE--eCCCcc----HHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCI--NYKTED----FVARVK  211 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~----~~~~~~  211 (335)
                      .|.++||          +|+++++|.+.++.+-..|++|+++.+++++.+.+.+...+ ..+  |-.+.+    +.+.+.
T Consensus         5 ~GK~alI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   74 (250)
T d1ydea1           5 AGKVVVV----------TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETI   74 (250)
T ss_dssp             TTCEEEE----------ETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHH
Confidence            5789999          99999999999999999999999999999988877653333 222  333322    122333


Q ss_pred             HHhCCCcccEEEeCCC
Q 019790          212 EETGGKGVDVILDCMG  227 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g  227 (335)
                      +..  .++|++++++|
T Consensus        75 ~~~--g~iDilVnnAG   88 (250)
T d1ydea1          75 RRF--GRLDCVVNNAG   88 (250)
T ss_dssp             HHH--SCCCEEEECCC
T ss_pred             Hhc--CCCCEEEeccc
Confidence            333  36999999887

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.06  E-value=0.0019  Score=53.44  Aligned_cols=103  Identities=20%  Similarity=0.350  Sum_probs=71.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCcc----HHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED----FVAR  209 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~----~~~~  209 (335)
                      -+|.++||          +||++++|.+.++.+-..|++|+++++++++.+.+. +++.....   |-.+..    +.+.
T Consensus         4 L~gK~alI----------TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~   73 (253)
T d1hxha_           4 LQGKVALV----------TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHH
Confidence            36788999          999999999999999999999999999998877664 56654433   222222    2233


Q ss_pred             HHHHhCCCcccEEEeCCChh-----------hH---------------HHhhcccc-CCCEEEEEeccCC
Q 019790          210 VKEETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLN-IDGRLFIIGTQGG  252 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~-~~G~~v~~g~~~~  252 (335)
                      +.+..  +++|++++++|..           .+               +.+++.|+ .+|+++.++....
T Consensus        74 ~~~~~--g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          74 VQRRL--GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             HHHHH--CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             HHHHh--CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            33333  3689999998731           01               23455554 4799999876654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.06  E-value=0.0019  Score=53.69  Aligned_cols=79  Identities=24%  Similarity=0.418  Sum_probs=56.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~----~  207 (335)
                      +|.++||          +|+++++|.+.++.+...|++|+++.+++++.+.+    ++.+....   .|-.+.+.    .
T Consensus         5 ~gK~alI----------TGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~   74 (258)
T d1ae1a_           5 KGTTALV----------TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLM   74 (258)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHH
Confidence            6889999          99999999999999999999999999998876654    34454432   23333222    2


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..+ ...|++++++|.
T Consensus        75 ~~~~~~~~-g~idilinnag~   94 (258)
T d1ae1a_          75 QTVAHVFD-GKLNILVNNAGV   94 (258)
T ss_dssp             HHHHHHTT-SCCCEEEECCCC
T ss_pred             HHHHHHhC-CCcEEEeccccc
Confidence            33344443 368999998874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.05  E-value=0.0016  Score=53.82  Aligned_cols=103  Identities=21%  Similarity=0.309  Sum_probs=72.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE-EeCCCcc----HHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTED----FVARVKE  212 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~----~~~~~~~  212 (335)
                      -.|.++||          +|+++++|.+.++.+...|++|+++.++++..+.+++.+...+ .|-.+.+    +.+.+.+
T Consensus         3 l~GK~alI----------TGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   72 (248)
T d2d1ya1           3 FAGKGVLV----------TGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAY   72 (248)
T ss_dssp             TTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence            46889999          9999999999999999999999999999888877777765432 2333322    2233333


Q ss_pred             HhCCCcccEEEeCCChh-----------hH---------------HHhhccccC--CCEEEEEeccCC
Q 019790          213 ETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNI--DGRLFIIGTQGG  252 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~~-----------~~---------------~~~~~~l~~--~G~~v~~g~~~~  252 (335)
                      ..  .++|++++++|..           .+               +.+++.|.+  +|+++.++....
T Consensus        73 ~~--G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          73 AL--GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             HH--SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             hc--CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            33  3699999988731           11               234555643  689998876654

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.02  E-value=4e-05  Score=62.40  Aligned_cols=99  Identities=22%  Similarity=0.193  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cCCC-EEEeCCCc
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGAD-VCINYKTE  204 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~  204 (335)
                      ....++++|++||-          .|  ++.|..++.+++..|  .+|+.++.+++..+.+++    .+.+ ..+...+.
T Consensus        68 l~~l~l~~g~~VLd----------iG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~  135 (213)
T d1dl5a1          68 MEWVGLDKGMRVLE----------IG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG  135 (213)
T ss_dssp             HHHTTCCTTCEEEE----------EC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred             HHhhhccccceEEE----------ec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCch
Confidence            36778999999999          87  445888889999876  489999999888777753    3332 22211111


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEE
Q 019790          205 DFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  247 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (335)
                      .  +   .......||.|+.+.+-..+ ...++.|+++|+++..
T Consensus       136 ~--~---~~~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         136 Y--Y---GVPEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             G--G---CCGGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             H--H---ccccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            0  0   01112469999987765443 5678899999999874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.97  E-value=0.0023  Score=54.14  Aligned_cols=101  Identities=21%  Similarity=0.229  Sum_probs=70.7

Q ss_pred             HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC-E-EEeC
Q 019790          128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-V-CINY  201 (335)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~-~-~~~~  201 (335)
                      ...+.+..++++|++||=          +|  ++.|..+..+|+..|++|+.++.++++.+.++    +.|.. . .+..
T Consensus        50 ~~~~~~~l~l~~G~~VLD----------iG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~  117 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLD----------IG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI  117 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEE----------ET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred             HHHHHHhcCCCCCCEEEE----------ec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhh
Confidence            444557889999999999          87  66788889999999999999999999876664    33432 1 1211


Q ss_pred             CCccHHHHHHHHhCCCcccEEEe-----CCCh-----------hhHHHhhccccCCCEEEEEe
Q 019790          202 KTEDFVARVKEETGGKGVDVILD-----CMGA-----------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid-----~~g~-----------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .+..       . ....||.|+.     .++.           ..+..+.+.|+|+|++++-.
T Consensus       118 ~d~~-------~-~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         118 QGWE-------E-FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             CCGG-------G-CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             hccc-------c-cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            1111       1 1247998864     4442           23677899999999997643

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=8.3e-05  Score=61.67  Aligned_cols=102  Identities=22%  Similarity=0.168  Sum_probs=70.4

Q ss_pred             HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC--E-EEe
Q 019790          128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--V-CIN  200 (335)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~--~-~~~  200 (335)
                      +..+....++.||++||=          +|  ++.|..+..+++..|++|+.++.++...+.+++    .|..  . ...
T Consensus        22 ~~~l~~~~~l~pg~~VLD----------iG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~   89 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILD----------LG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIH   89 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEE----------ET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred             HHHHHHHcCCCCCCEEEE----------Ec--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhh
Confidence            344667889999999988          77  556777788888889999999999988877654    3432  1 222


Q ss_pred             CCCccHHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790          201 YKTEDFVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      .+..       +....+.||.|+-.-.     .  ..+..+.+.|+|+|+++...
T Consensus        90 ~d~~-------~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          90 NDAA-------GYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             SCCT-------TCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             hHHh-------hccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            1111       1223457999875322     1  23577899999999997653

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0021  Score=53.90  Aligned_cols=93  Identities=19%  Similarity=0.284  Sum_probs=62.2

Q ss_pred             ccccchHHHHHHH-HHhhCCCeEEEEecChhhHHHHH----HcCCC-EEE--eCCCcc----HHHHHHHHhCCCcccEEE
Q 019790          156 HGGSSGIGTFAIQ-MGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTED----FVARVKEETGGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~-~a~~~g~~V~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~----~~~~~~~~~~~~~~d~vi  223 (335)
                      +||++++|.++++ +++..|++|++++|++++.+.+.    +.+.. ..+  |-.+.+    +.+.+.+..+  ++|+++
T Consensus         9 TGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g--~iDiLV   86 (275)
T d1wmaa1           9 TGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG--GLDVLV   86 (275)
T ss_dssp             SSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS--SEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC--CcEEEE
Confidence            9999999998876 45566999999999998876553    33332 222  333322    2344444443  699999


Q ss_pred             eCCChh-----------h---------------HHHhhccccCCCEEEEEecc
Q 019790          224 DCMGAS-----------Y---------------FQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       224 d~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~  250 (335)
                      +++|-.           .               .+.+++.|++.|+++.++..
T Consensus        87 nNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          87 NNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             ECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             EcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            998731           0               13456778888999988654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.93  E-value=0.0019  Score=53.13  Aligned_cols=79  Identities=19%  Similarity=0.295  Sum_probs=57.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCcc----HHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTED----FVAR  209 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~----~~~~  209 (335)
                      -.|.++||          +|+++++|.+.++.+...|++|+++.+++++.+.+. +++....   .|-.+.+    +.+.
T Consensus         4 L~gK~alI----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   73 (244)
T d1nffa_           4 LTGKVALV----------SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDT   73 (244)
T ss_dssp             TTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHH
Confidence            46788999          999999999999999999999999999998877665 4443222   2333322    2233


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+..  .++|++++++|.
T Consensus        74 ~~~~~--g~idilinnAG~   90 (244)
T d1nffa_          74 AVTAF--GGLHVLVNNAGI   90 (244)
T ss_dssp             HHHHH--SCCCEEEECCCC
T ss_pred             HHHHh--CCCeEEEECCcc
Confidence            33333  369999999873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0017  Score=53.54  Aligned_cols=79  Identities=19%  Similarity=0.286  Sum_probs=58.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE--EEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~  215 (335)
                      -+|.++||          +|+++++|.+.++.+...|++|+++.+++++.+.+.+.....  ..|.......+...+.. 
T Consensus         4 l~gK~alI----------TGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-   72 (245)
T d2ag5a1           4 LDGKVIIL----------TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-   72 (245)
T ss_dssp             TTTCEEEE----------SSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-
Confidence            35788999          999999999999999999999999999998887776533222  23434444444444444 


Q ss_pred             CCcccEEEeCCCh
Q 019790          216 GKGVDVILDCMGA  228 (335)
Q Consensus       216 ~~~~d~vid~~g~  228 (335)
                       .+.|+++++.|.
T Consensus        73 -~~id~lVn~ag~   84 (245)
T d2ag5a1          73 -ERLDVLFNVAGF   84 (245)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -ccceeEEecccc
Confidence             368999998873

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.92  E-value=0.00013  Score=60.19  Aligned_cols=99  Identities=23%  Similarity=0.289  Sum_probs=65.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCC------ccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT------EDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~  212 (335)
                      +|.++||          +|+++++|.++++.+...|++|+.+++++.+..     ..........      ......+.+
T Consensus         1 egK~vlI----------TGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~   65 (236)
T d1dhra_           1 EARRVLV----------YGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGK   65 (236)
T ss_dssp             CCCEEEE----------ETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHH
Confidence            4788999          999999999999999999999999987654321     1111111111      112334444


Q ss_pred             HhCCCcccEEEeCCCh----h--------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          213 ETGGKGVDVILDCMGA----S--------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~----~--------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      ..+..++|++++++|.    .        .+               ..+++.|+++|+++.++....
T Consensus        66 ~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~  132 (236)
T d1dhra_          66 LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA  132 (236)
T ss_dssp             HHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             HhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH
Confidence            5555679999998872    0        01               234566788999999976653

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.90  E-value=0.0017  Score=54.47  Aligned_cols=77  Identities=27%  Similarity=0.419  Sum_probs=56.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCcc----HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTED----FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~----~~~~~  210 (335)
                      +|.++||          +||++++|.++++.+-..|++|+++.+++++.+.+. +++....   .|-.+.+    +.+.+
T Consensus         4 ~gK~alI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (276)
T d1bdba_           4 KGEAVLI----------TGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRC   73 (276)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHH
Confidence            5789999          999999999999999999999999999998876654 4554332   2333322    22333


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++++++|
T Consensus        74 ~~~~--g~idilvnnAG   88 (276)
T d1bdba_          74 VARF--GKIDTLIPNAG   88 (276)
T ss_dssp             HHHH--SCCCEEECCCC
T ss_pred             HHHh--CCccccccccc
Confidence            3333  36999999887

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.89  E-value=0.002  Score=53.36  Aligned_cols=77  Identities=29%  Similarity=0.497  Sum_probs=55.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEE---EeCCCcc----HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC---INYKTED----FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~---~~~~~~~----~~~~~  210 (335)
                      +|.++||          +||++++|.+.++.+-..|++|+++.+++++.+.+. +++....   .|-.+.+    +.+.+
T Consensus         4 ~gK~alV----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (254)
T d1hdca_           4 SGKTVII----------TGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHH
Confidence            5788999          999999999999999999999999999988876654 4553322   2333322    22333


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+  ++|++++++|
T Consensus        74 ~~~~g--~iDilVnnAg   88 (254)
T d1hdca_          74 REEFG--SVDGLVNNAG   88 (254)
T ss_dssp             HHHHS--CCCEEEECCC
T ss_pred             HHHcC--CccEEEecCc
Confidence            33333  6999999887

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.89  E-value=0.002  Score=53.39  Aligned_cols=77  Identities=19%  Similarity=0.351  Sum_probs=56.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCccH----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTEDF----VARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~~----~~~~  210 (335)
                      +|.++||          +||++++|.++++.+...|++|+++.+++++.+.+. +++.....   |-.+.+-    .+.+
T Consensus         4 ~gK~alV----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   73 (256)
T d1k2wa_           4 DGKTALI----------TGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAEL   73 (256)
T ss_dssp             TTEEEEE----------ETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHH
Confidence            4778999          999999999999999999999999999988776654 56654432   3333222    2233


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..  .++|++++++|
T Consensus        74 ~~~~--g~iDilVnnAg   88 (256)
T d1k2wa_          74 LDRW--GSIDILVNNAA   88 (256)
T ss_dssp             HHHH--SCCCEEEECCC
T ss_pred             HHHh--CCccEEEeecc
Confidence            3333  36999999887

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.89  E-value=0.0088  Score=49.53  Aligned_cols=101  Identities=17%  Similarity=0.211  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHH----c-C---CCEEEe
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----L-G---ADVCIN  200 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~----~-g---~~~~~~  200 (335)
                      +....+++||++||-          .|  .+.|.++..+|+..|.  +|+.++.+++..+.+++    + +   .+..+.
T Consensus        88 Ii~~l~i~PG~~VLE----------~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~  155 (264)
T d1i9ga_          88 IVHEGDIFPGARVLE----------AG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV  155 (264)
T ss_dssp             HHHHTTCCTTCEEEE----------EC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred             HHHHhCCCCCCEEEe----------cC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEE
Confidence            346789999999999          66  5678888899998864  89999999998877754    1 1   122222


Q ss_pred             CCCccHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          201 YKTEDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ..+  ..+   .......||.||-.+..  ..+..+.+.|+++|+++.+-
T Consensus       156 ~~d--~~~---~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         156 VSD--LAD---SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             CSC--GGG---CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ecc--ccc---ccccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence            222  110   11223579988765655  45788999999999998763

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.88  E-value=0.0029  Score=48.81  Aligned_cols=71  Identities=20%  Similarity=0.281  Sum_probs=54.2

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARV  210 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~  210 (335)
                      +..++.++.+|||          +| +|+.+.+++..++..|+ +++++.|+.++.+.+.+ ++... ++...       
T Consensus        10 ~~~~~~~~~~vlI----------lG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~-------   70 (167)
T d1npya1          10 EKYHLNKNAKVIV----------HG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE-------   70 (167)
T ss_dssp             HHTTCCTTSCEEE----------EC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT-------
T ss_pred             HHcCCCCCCeEEE----------EC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc-------
Confidence            4556667888999          88 79999999999999998 89999999998877764 44432 32211       


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                           ...+|++++|++
T Consensus        71 -----~~~~DliINaTp   82 (167)
T d1npya1          71 -----NQQADILVNVTS   82 (167)
T ss_dssp             -----TCCCSEEEECSS
T ss_pred             -----ccchhhheeccc
Confidence                 135899999986

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0023  Score=52.57  Aligned_cols=101  Identities=26%  Similarity=0.376  Sum_probs=69.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCE---EEeCCCcc----HHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTED----FVARV  210 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~----~~~~~  210 (335)
                      +|.++||          +||++++|.+.++.+...|++|+++.+++++.+.+. +++...   ..|-.+.+    +.+.+
T Consensus         3 ~gK~alI----------TGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (243)
T d1q7ba_           3 EGKIALV----------TGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKI   72 (243)
T ss_dssp             TTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhh
Confidence            4788999          999999999999999999999999999998877665 344322   23433322    22333


Q ss_pred             HHHhCCCcccEEEeCCChh-----------h---------------HHHhhccc--cCCCEEEEEeccC
Q 019790          211 KEETGGKGVDVILDCMGAS-----------Y---------------FQRNLGSL--NIDGRLFIIGTQG  251 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~  251 (335)
                      .+..  +++|++++++|..           .               .+.+++.|  +.+|+++.++...
T Consensus        73 ~~~~--g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~  139 (243)
T d1q7ba_          73 RAEF--GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVV  139 (243)
T ss_dssp             HHHT--CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             hccc--CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchh
Confidence            3333  3699999988631           0               12345555  3469999987654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0033  Score=52.01  Aligned_cols=78  Identities=19%  Similarity=0.330  Sum_probs=55.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE-E--eCCCcc----HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC-I--NYKTED----FV  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~-~--~~~~~~----~~  207 (335)
                      +|.++||          +||++++|.+.++.+...|++|+++.+++++.+.+    ++.+.... +  |-.+.+    +.
T Consensus        10 ~gK~alI----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~   79 (255)
T d1fmca_          10 DGKCAII----------TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHH
Confidence            6889999          99999999999999999999999999998876554    34554432 2  333322    22


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..+  ++|++++++|.
T Consensus        80 ~~~~~~~g--~iDilvnnAG~   98 (255)
T d1fmca_          80 DFAISKLG--KVDILVNNAGG   98 (255)
T ss_dssp             HHHHHHHS--SCCEEEECCCC
T ss_pred             HHHHHHcC--CCCEeeeCCcC
Confidence            33333333  69999998873

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.86  E-value=0.0013  Score=53.43  Aligned_cols=107  Identities=15%  Similarity=0.145  Sum_probs=70.9

Q ss_pred             CcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC---CC
Q 019790          120 FPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG---AD  196 (335)
Q Consensus       120 ~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g---~~  196 (335)
                      +..+...|.  +.....+++|++||-          .|  ++.|..++.+++. +.+|+.++.+++..+.+++.-   .+
T Consensus        53 ~~~p~~~a~--ml~~L~l~~g~~VLd----------IG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~n  117 (224)
T d1vbfa_          53 TTALNLGIF--MLDELDLHKGQKVLE----------IG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNN  117 (224)
T ss_dssp             ECCHHHHHH--HHHHTTCCTTCEEEE----------EC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSS
T ss_pred             eehhhhHHH--HHHHhhhcccceEEE----------ec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccc
Confidence            334444444  336678999999999          87  4567778777775 679999999998888776531   11


Q ss_pred             -EEEeCCC-ccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEEe
Q 019790          197 -VCINYKT-EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       197 -~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g  248 (335)
                       .+...+. ..+.       ..++||.|+-+.+... ....+++|++||+++..-
T Consensus       118 v~~~~~d~~~g~~-------~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pv  165 (224)
T d1vbfa_         118 IKLILGDGTLGYE-------EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPI  165 (224)
T ss_dssp             EEEEESCGGGCCG-------GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cccccCchhhcch-------hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEE
Confidence             1222111 1111       1257999987666544 356789999999998763

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.86  E-value=0.0076  Score=50.18  Aligned_cols=102  Identities=24%  Similarity=0.324  Sum_probs=68.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhHHH----HHHcCCCEEE---eCCCcc-H--
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAV----CKDLGADVCI---NYKTED-F--  206 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~----~~~~g~~~~~---~~~~~~-~--  206 (335)
                      -+|.++||          +|+++++|.+.++.+...|++|+++.++. +..+.    +++.+.+...   |-.+.. +  
T Consensus        16 L~gK~~lI----------TGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~   85 (272)
T d1g0oa_          16 LEGKVALV----------TGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVR   85 (272)
T ss_dssp             CTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHH
Confidence            35789999          99999999999999999999999988763 33332    3455554433   333321 2  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCChh--------------------------hHHHhhccccCCCEEEEEeccC
Q 019790          207 -VARVKEETGGKGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                       .+.+.+..+  ++|+++++.|..                          ..+.+...|..+|+++.++...
T Consensus        86 ~~~~~~~~~g--~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~  155 (272)
T d1g0oa_          86 MFEEAVKIFG--KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT  155 (272)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG
T ss_pred             HHHHHHHHhC--CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc
Confidence             233333333  689999988631                          0134567788889998886544

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.85  E-value=0.0034  Score=52.07  Aligned_cols=79  Identities=25%  Similarity=0.398  Sum_probs=55.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~----~  207 (335)
                      +|.++||          +||++++|.++++.+...|++|+++.+++++.+.+.    +.+....   .|-.+.+-    .
T Consensus         7 kgK~alV----------TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d1xq1a_           7 KAKTVLV----------TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLM   76 (259)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHH
Confidence            5789999          999999999999999999999999999988776653    2333322   23333222    2


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..++ .+|++++++|.
T Consensus        77 ~~~~~~~~g-~idilvnnAG~   96 (259)
T d1xq1a_          77 QTVSSMFGG-KLDILINNLGA   96 (259)
T ss_dssp             HHHHHHHTT-CCSEEEEECCC
T ss_pred             HHHHHHhCC-Ccccccccccc
Confidence            233333333 59999999873

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.84  E-value=0.0031  Score=52.35  Aligned_cols=78  Identities=22%  Similarity=0.335  Sum_probs=54.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccH-H---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDF-V---  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~-~---  207 (335)
                      .|.++||          +|+++++|.++++.+-..|++|++..+++++.+.+.    +.+....   .|-.+.+- .   
T Consensus         7 ~GK~alI----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d2ae2a_           7 EGCTALV----------TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELM   76 (259)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHH
Confidence            5788999          999999999999999999999999999988776553    3343322   23333222 2   


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..+ .++|++++++|
T Consensus        77 ~~~~~~~~-~~idilvnnAG   95 (259)
T d2ae2a_          77 NTVANHFH-GKLNILVNNAG   95 (259)
T ss_dssp             HHHHHHTT-TCCCEEEECCC
T ss_pred             HHHHHHhC-CCceEEEECCc
Confidence            22222222 36999999987

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.82  E-value=0.00044  Score=58.50  Aligned_cols=100  Identities=18%  Similarity=0.213  Sum_probs=70.4

Q ss_pred             HHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC-C-EEEeC
Q 019790          128 WSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D-VCINY  201 (335)
Q Consensus       128 ~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~-~-~~~~~  201 (335)
                      ...+.+..++++|++||=          +|  ++.|..++.+|+..|++|++++.++++.+.+++    .|. + ..+..
T Consensus        51 ~~~~~~~l~l~~G~~VLD----------iG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~  118 (285)
T d1kpga_          51 IDLALGKLGLQPGMTLLD----------VG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLL  118 (285)
T ss_dssp             HHHHHTTTTCCTTCEEEE----------ET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred             HHHHHHHcCCCCCCEEEE----------ec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH
Confidence            344557789999999999          87  778999999999999999999999998887754    221 1 11111


Q ss_pred             CCccHHHHHHHHhCCCcccEEEe-----CCChh----hHHHhhccccCCCEEEEE
Q 019790          202 KTEDFVARVKEETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                        .++    .+. . ..||.|+.     .++..    .+..+.+.|+|+|++++.
T Consensus       119 --~d~----~~~-~-~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         119 --AGW----EQF-D-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             --SCG----GGC-C-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             --hhh----hcc-c-ccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence              111    111 2 36888764     44432    256788999999999754

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.78  E-value=0.0039  Score=51.43  Aligned_cols=78  Identities=26%  Similarity=0.371  Sum_probs=55.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-----HHcCCCEE---EeCCCcc----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----KDLGADVC---INYKTED----F  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-----~~~g~~~~---~~~~~~~----~  206 (335)
                      +|.++||          +||++++|.+.++.+-..|++|+++.+++++.+..     ++.+....   .|-.+.+    +
T Consensus         4 ~gK~~lI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~   73 (251)
T d1vl8a_           4 RGRVALV----------TGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKL   73 (251)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHH
Confidence            4778999          99999999999999999999999999998876543     23454432   2333322    2


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..+  ++|++++++|.
T Consensus        74 ~~~~~~~~g--~iDiLVnnAG~   93 (251)
T d1vl8a_          74 LEAVKEKFG--KLDTVVNAAGI   93 (251)
T ss_dssp             HHHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHHcC--CCCEEEECCCC
Confidence            333333333  69999999873

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.0045  Score=50.82  Aligned_cols=78  Identities=22%  Similarity=0.322  Sum_probs=55.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCccH----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDF----V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~----~  207 (335)
                      .|..+||          +||++++|.+.+..+-..|++|+++++++++.+.+.    +.+....   .|..+.+-    .
T Consensus         6 ~Gkv~lI----------TGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           6 TGEIVLI----------TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            5789999          999999999999999999999999999998876553    4444322   23333222    2


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  ++.|++++++|.
T Consensus        76 ~~i~~~~--g~idilinnag~   94 (244)
T d1yb1a_          76 KKVKAEI--GDVSILVNNAGV   94 (244)
T ss_dssp             HHHHHHT--CCCSEEEECCCC
T ss_pred             HHHHHHc--CCCceeEeeccc
Confidence            2333333  369999999873

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.77  E-value=0.0019  Score=53.23  Aligned_cols=77  Identities=25%  Similarity=0.357  Sum_probs=55.3

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCC-C-EEE--eCCCc----cHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGA-D-VCI--NYKTE----DFVARV  210 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~-~-~~~--~~~~~----~~~~~~  210 (335)
                      .+|||          +||++++|.++++.+-..|+  +|+.+.|++++.+.+++... . .++  |-.+.    .+.+.+
T Consensus         4 KtilI----------TGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i   73 (250)
T d1yo6a1           4 GSVVV----------TGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV   73 (250)
T ss_dssp             SEEEE----------SSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEE----------eCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHH
Confidence            67999          99999999999988887886  78889999998888876432 2 222  33332    223444


Q ss_pred             HHHhCCCcccEEEeCCC
Q 019790          211 KEETGGKGVDVILDCMG  227 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g  227 (335)
                      .+..+..+.|++++++|
T Consensus        74 ~~~~~~~~idilinnAG   90 (250)
T d1yo6a1          74 GEIVGSDGLSLLINNAG   90 (250)
T ss_dssp             HHHHGGGCCCEEEECCC
T ss_pred             HHHhCCCCeEEEEEcCc
Confidence            44444456999999987

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.76  E-value=0.00018  Score=59.68  Aligned_cols=98  Identities=15%  Similarity=0.124  Sum_probs=67.1

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cC-CCE-EEeCCCc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-ADV-CINYKTE  204 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g-~~~-~~~~~~~  204 (335)
                      ...+++||++||-          .|  .+.|.++..+|+..|  .+|+.++.+++..+.+++    ++ .+. .+..  .
T Consensus        79 ~~l~i~pG~rVLE----------iG--~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~--~  144 (250)
T d1yb2a1          79 MRCGLRPGMDILE----------VG--VGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR--S  144 (250)
T ss_dssp             --CCCCTTCEEEE----------EC--CTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC--S
T ss_pred             HHcCCCCcCEEEE----------ee--eeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE--e
Confidence            5689999999999          76  445777888888765  489999999998887764    22 222 1211  2


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          205 DFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ++    .+......||.||-....  ..+..+.+.|+|+|+++.+.
T Consensus       145 Di----~~~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         145 DI----ADFISDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             CT----TTCCCSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ee----ecccccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            22    222334579998855554  34788999999999998764

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.74  E-value=0.0043  Score=50.84  Aligned_cols=79  Identities=24%  Similarity=0.313  Sum_probs=57.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEE---eCCCcc-H---HHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---NYKTED-F---VAR  209 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~---~~~~~~-~---~~~  209 (335)
                      -.|.++||          +||++++|.+.++-+...|++|+++.++.++.+... +++.+...   |-.+.+ .   .+.
T Consensus         3 l~gK~alI----------tGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~   72 (241)
T d2a4ka1           3 LSGKTILV----------TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAE   72 (241)
T ss_dssp             TTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHH
Confidence            46789999          999999999999999999999999999998776554 56654432   333322 2   223


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+..  +++|++++++|.
T Consensus        73 i~~~~--g~iDiLinnAg~   89 (241)
T d2a4ka1          73 ALEEF--GRLHGVAHFAGV   89 (241)
T ss_dssp             HHHHH--SCCCEEEEGGGG
T ss_pred             HHHHh--CCccEecccccc
Confidence            33333  369999998863

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.74  E-value=0.0045  Score=51.30  Aligned_cols=77  Identities=19%  Similarity=0.286  Sum_probs=55.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc----HH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED----FV  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~----~~  207 (335)
                      +|.++||          +||++++|.+++..+-..|++|+++.+++++.+.+.    +.+.+..   .|-.+.+    +.
T Consensus         4 ~gK~alI----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   73 (260)
T d1zema1           4 NGKVCLV----------TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTV   73 (260)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            5789999          999999999999999999999999999988776553    3444332   2333322    22


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  +++|++++++|
T Consensus        74 ~~~~~~~--g~iDilVnnaG   91 (260)
T d1zema1          74 DSVVRDF--GKIDFLFNNAG   91 (260)
T ss_dssp             HHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHh--CCCCeehhhhc
Confidence            3333333  36999999876

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.72  E-value=0.0043  Score=50.53  Aligned_cols=73  Identities=23%  Similarity=0.274  Sum_probs=53.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      +|.++||          +|+++++|.++++.+...|++|+++.++++..+   +.+...+. .+-.+..+.+.+..+  +
T Consensus         3 kgK~~lV----------TGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~~~~~~~~-~Dv~~~~~~~~~~~g--~   66 (234)
T d1o5ia_           3 RDKGVLV----------LAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGHRYVV-CDLRKDLDLLFEKVK--E   66 (234)
T ss_dssp             TTCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCSEEEE-CCTTTCHHHHHHHSC--C
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---hcCCcEEE-cchHHHHHHHHHHhC--C
Confidence            4678999          999999999999999999999999999876554   44443322 222222344555543  6


Q ss_pred             ccEEEeCCC
Q 019790          219 VDVILDCMG  227 (335)
Q Consensus       219 ~d~vid~~g  227 (335)
                      +|++++++|
T Consensus        67 iD~lVnnAG   75 (234)
T d1o5ia_          67 VDILVLNAG   75 (234)
T ss_dssp             CSEEEECCC
T ss_pred             CcEEEeccc
Confidence            999999887

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.71  E-value=0.0057  Score=50.46  Aligned_cols=93  Identities=20%  Similarity=0.233  Sum_probs=62.5

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCccHHHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVK  211 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~  211 (335)
                      .++|++||=          .| +| .|..++.+++ +|++|++++.+++..+.+++    .+.. .++.   .+..    
T Consensus       118 ~~~g~~VLD----------iG-cG-sG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~---~d~~----  177 (254)
T d2nxca1         118 LRPGDKVLD----------LG-TG-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE---GSLE----  177 (254)
T ss_dssp             CCTTCEEEE----------ET-CT-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE---SCHH----
T ss_pred             cCccCEEEE----------cc-cc-hhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEe---cccc----
Confidence            578999887          66 33 4666665554 68999999999998877763    3432 2332   2222    


Q ss_pred             HHhCCCcccEEEeCCChhh----HHHhhccccCCCEEEEEec
Q 019790          212 EETGGKGVDVILDCMGASY----FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~~----~~~~~~~l~~~G~~v~~g~  249 (335)
                      +......||+|+.+.....    +..+.+.|+|+|++++.|.
T Consensus       178 ~~~~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         178 AALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            2223357999998766543    3556788999999987654

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.69  E-value=0.00053  Score=57.92  Aligned_cols=111  Identities=22%  Similarity=0.340  Sum_probs=74.5

Q ss_pred             CChhhhccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       112 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      .++++|-      ...+..+.+..++++|++||-          +|  ++.|..+..+++..|++|+.++.+++..+.++
T Consensus        31 ~tL~~AQ------~~k~~~~~~~l~l~~g~~VLD----------iG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~   92 (280)
T d2fk8a1          31 LTLEEAQ------YAKVDLNLDKLDLKPGMTLLD----------IG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCE   92 (280)
T ss_dssp             CCHHHHH------HHHHHHHHTTSCCCTTCEEEE----------ES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH
T ss_pred             CCHHHHH------HHHHHHHHHHcCCCCCCEEEE----------ec--CCchHHHHHHHHhCceeEEEecchHHHHHHHH
Confidence            4556553      223445567789999999999          87  55667788899999999999999999988776


Q ss_pred             H----cCCC--EEEeCCCccHHHHHHHHhCCCcccEEEe-----CCChh----hHHHhhccccCCCEEEEEe
Q 019790          192 D----LGAD--VCINYKTEDFVARVKEETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       192 ~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vid-----~~g~~----~~~~~~~~l~~~G~~v~~g  248 (335)
                      +    .+..  ..+...  +.    .+ . ...||.|+-     .++..    .+..+.+.|+|+|++++-.
T Consensus        93 ~~~~~~~l~~~~~~~~~--d~----~~-~-~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~~  156 (280)
T d2fk8a1          93 QVLASIDTNRSRQVLLQ--GW----ED-F-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS  156 (280)
T ss_dssp             HHHHTSCCSSCEEEEES--CG----GG-C-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             HHHHhhccccchhhhhh--hh----hh-h-ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEEE
Confidence            4    2321  111111  11    11 1 236898863     44433    2577889999999998643

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.68  E-value=0.0058  Score=50.35  Aligned_cols=78  Identities=19%  Similarity=0.327  Sum_probs=56.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC--CC-EEE--eCCCcc----HHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG--AD-VCI--NYKTED----FVA  208 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g--~~-~~~--~~~~~~----~~~  208 (335)
                      .|..+||          +||++++|.+.++.+-..|++|+++.+++++.+.+.+ ++  .. ..+  |-.+.+    +.+
T Consensus         5 ~gK~alV----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   74 (251)
T d1zk4a1           5 DGKVAII----------TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHH
Confidence            5788999          9999999999999999999999999999888776653 32  12 222  333322    233


Q ss_pred             HHHHHhCCCcccEEEeCCCh
Q 019790          209 RVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+..+  ++|++++++|.
T Consensus        75 ~~~~~~G--~iDiLVnnAg~   92 (251)
T d1zk4a1          75 ATEKAFG--PVSTLVNNAGI   92 (251)
T ss_dssp             HHHHHHS--SCCEEEECCCC
T ss_pred             HHHHHhC--CceEEEecccc
Confidence            3444443  69999998873

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.65  E-value=0.0061  Score=50.35  Aligned_cols=76  Identities=34%  Similarity=0.445  Sum_probs=53.5

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCcc-H---HH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTED-F---VA  208 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~-~---~~  208 (335)
                      |...||          +||++++|.+.+..+-..|++|+++.+++++.+.+    ++.+....   .|-.+.+ .   .+
T Consensus         2 gKValI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~   71 (257)
T d2rhca1           2 SEVALV----------TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA   71 (257)
T ss_dssp             CCEEEE----------ESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence            556789          99999999999999999999999999998876554    34554432   2333322 2   22


Q ss_pred             HHHHHhCCCcccEEEeCCC
Q 019790          209 RVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+..  .++|++++++|
T Consensus        72 ~~~~~~--g~iDilVnnAG   88 (257)
T d2rhca1          72 AVVERY--GPVDVLVNNAG   88 (257)
T ss_dssp             HHHHHT--CSCSEEEECCC
T ss_pred             HHHHHh--CCCCEEEeccc
Confidence            333333  36999999987

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.64  E-value=0.0061  Score=47.57  Aligned_cols=98  Identities=15%  Similarity=0.004  Sum_probs=64.9

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC--C--------------
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--D--------------  196 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~--~--------------  196 (335)
                      ....+.++.+||.          .|  .+.|..+..+|+. |++|++++.|++..+.+++...  .              
T Consensus        14 ~~l~~~~~~rvLd----------~G--CG~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~   80 (201)
T d1pjza_          14 SSLNVVPGARVLV----------PL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP   80 (201)
T ss_dssp             HHHCCCTTCEEEE----------TT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS
T ss_pred             HHcCCCCCCEEEE----------ec--CcCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhcccc
Confidence            3457899999999          77  6678888888875 9999999999999998875311  0              


Q ss_pred             --EEEeCCCccHHHHHHHHhCCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEe
Q 019790          197 --VCINYKTEDFVARVKEETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       197 --~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g  248 (335)
                        ..+..+..+.....     ...+|.|++...-         ..+..+.+.|+++|++++..
T Consensus        81 ~~~~~~~d~~~l~~~~-----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          81 GIEIWCGDFFALTARD-----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SSEEEEECCSSSTHHH-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             ccceeccccccccccc-----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence              11111111111111     1258999884431         12466789999999987653

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.57  E-value=0.0071  Score=50.00  Aligned_cols=77  Identities=25%  Similarity=0.362  Sum_probs=54.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----Hc--CCCEE-E--eCCCccH---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL--GADVC-I--NYKTEDF---  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~--g~~~~-~--~~~~~~~---  206 (335)
                      .|..+||          +||++++|.++++.+-..|++|+++.+++++.+.+.    +.  +.... +  |-.+.+-   
T Consensus         3 ~gK~alI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~   72 (258)
T d1iy8a_           3 TDRVVLI----------TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEA   72 (258)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHH
Confidence            4678999          999999999999999999999999999988766543    22  22222 2  3333222   


Q ss_pred             -HHHHHHHhCCCcccEEEeCCC
Q 019790          207 -VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g  227 (335)
                       .+.+.+..+  ++|++++++|
T Consensus        73 ~~~~~~~~~G--~iDiLVnnAG   92 (258)
T d1iy8a_          73 YVTATTERFG--RIDGFFNNAG   92 (258)
T ss_dssp             HHHHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHHHhC--CCCEEEECCc
Confidence             233333333  6999999886

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.56  E-value=0.0056  Score=50.75  Aligned_cols=78  Identities=22%  Similarity=0.305  Sum_probs=53.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-hHH----HHHHcCCCEEE---eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADVCI---NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-~~~----~~~~~g~~~~~---~~~~~~~----  206 (335)
                      .|..+||          +||++++|.+.++.+-..|++|+++.++.+ ..+    .+++.+.....   |-.+.+-    
T Consensus         6 ~gK~alI----------TGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~   75 (261)
T d1geea_           6 EGKVVVI----------TGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINL   75 (261)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            5788999          999999999999999999999999998754 332    33445543322   3333221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      .+.+.+..  +++|++++++|.
T Consensus        76 ~~~~~~~~--G~iDiLVnnAG~   95 (261)
T d1geea_          76 VQSAIKEF--GKLDVMINNAGL   95 (261)
T ss_dssp             HHHHHHHH--SCCCEEEECCCC
T ss_pred             HHHHHHHh--CCCCEeecccee
Confidence            23333333  369999998873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.54  E-value=0.0073  Score=50.18  Aligned_cols=78  Identities=14%  Similarity=0.305  Sum_probs=55.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCC---CEEE--eCCCcc-H---H
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA---DVCI--NYKTED-F---V  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~---~~~~--~~~~~~-~---~  207 (335)
                      -+|..+||          +||++++|.+.++.+...|++|+++.+++++.+.+. +++.   ...+  |-.+.+ .   .
T Consensus         4 L~gKvalI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~   73 (268)
T d2bgka1           4 LQDKVAII----------TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLV   73 (268)
T ss_dssp             TTTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHH
Confidence            36788999          999999999999999999999999999998877664 3332   1222  333322 2   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+.+..  +++|++++++|
T Consensus        74 ~~~~~~~--g~iD~lVnnAG   91 (268)
T d2bgka1          74 DTTIAKH--GKLDIMFGNVG   91 (268)
T ss_dssp             HHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHc--CCcceeccccc
Confidence            2333333  36999999886

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0051  Score=50.79  Aligned_cols=78  Identities=22%  Similarity=0.319  Sum_probs=55.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc-----CCCE---EEeCCCcc----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GADV---CINYKTED----  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~-----g~~~---~~~~~~~~----  205 (335)
                      +|..+||          +||++++|.++++.+-..|++|+++.+++++.+.+. ++     +...   ..|-.+..    
T Consensus         2 ~GKvalI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~   71 (254)
T d2gdza1           2 NGKVALV----------TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRD   71 (254)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHH
Confidence            4788999          999999999999999999999999999988776654 22     1122   12333322    


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh
Q 019790          206 FVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+.+..+  ++|++++++|.
T Consensus        72 ~~~~~~~~~G--~iDilVnnAg~   92 (254)
T d2gdza1          72 TFRKVVDHFG--RLDILVNNAGV   92 (254)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHHHcC--CcCeecccccc
Confidence            2233333333  69999999984

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.50  E-value=0.0084  Score=49.18  Aligned_cols=78  Identities=18%  Similarity=0.277  Sum_probs=54.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh--HHHHHHcCCCEEE---eCCCcc----HHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADVCI---NYKTED----FVAR  209 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~--~~~~~~~g~~~~~---~~~~~~----~~~~  209 (335)
                      +|..+||          +|+++++|.++++.+-..|++|+++.+++++  .+.+++.+.....   |-.+.+    +.+.
T Consensus         4 ~gKvalV----------TGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~   73 (247)
T d2ew8a1           4 KDKLAVI----------TGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQ   73 (247)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            5788999          9999999999999999999999999987543  2344566654322   333322    2223


Q ss_pred             HHHHhCCCcccEEEeCCCh
Q 019790          210 VKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+..  +++|++++++|.
T Consensus        74 ~~~~~--G~iDilVnnAG~   90 (247)
T d2ew8a1          74 VISTF--GRCDILVNNAGI   90 (247)
T ss_dssp             HHHHH--SCCCEEEECCCC
T ss_pred             HHHHc--CCCCEEEECCCC
Confidence            33333  369999999873

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.01  Score=45.70  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=55.5

Q ss_pred             HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC---CCEEEeCCCc
Q 019790          129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG---ADVCINYKTE  204 (335)
Q Consensus       129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g---~~~~~~~~~~  204 (335)
                      .+|.+..-..++.++||          +| +|+.+.+++..+..+|++++++.|+.++.+.+.+ +.   ....+...  
T Consensus         7 ~~l~~~~~~~~~k~vlI----------lG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~--   73 (170)
T d1nyta1           7 SDLERLSFIRPGLRILL----------IG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMD--   73 (170)
T ss_dssp             HHHHHHTCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSG--
T ss_pred             HHHHHcCCCCCCCEEEE----------EC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccc--
Confidence            34544444467889999          88 7999999999999999999999999988777653 22   21222111  


Q ss_pred             cHHHHHHHHhCCCcccEEEeCCChh
Q 019790          205 DFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       205 ~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      .        .....+|++++|++..
T Consensus        74 ~--------~~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          74 E--------LEGHEFDLIINATSSG   90 (170)
T ss_dssp             G--------GTTCCCSEEEECCSCG
T ss_pred             c--------ccccccceeecccccC
Confidence            1        1124689999998653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.014  Score=44.26  Aligned_cols=111  Identities=16%  Similarity=0.199  Sum_probs=77.0

Q ss_pred             HHHHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc
Q 019790          127 VWSTVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED  205 (335)
Q Consensus       127 a~~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~  205 (335)
                      .+.++.+..+ .-.|.+++|          .| .|-+|...++.++.+|++|++++..+.+.-++.--|.. +.     .
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V----------~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~-----~   72 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVV----------AG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VT-----T   72 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----C
T ss_pred             HHHHHHHHhCceecCCEEEE----------ec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-ee-----e
Confidence            4444545444 458889988          77 89999999999999999999999988665555444543 22     1


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChhh--HHHhhccccCCCEEEEEeccCCCccccChhHHh
Q 019790          206 FVARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF  263 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  263 (335)
                          +.+..  ...|+++-|+|...  ..+.++.|+++--+..+|...   .+++...+.
T Consensus        73 ----~~~a~--~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd---~EId~~~L~  123 (163)
T d1li4a1          73 ----MDEAC--QEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD---VEIDVKWLN  123 (163)
T ss_dssp             ----HHHHT--TTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSST---TSBCHHHHH
T ss_pred             ----hhhhh--hhccEEEecCCCccchhHHHHHhccCCeEEEEecccc---ceecHHHHh
Confidence                22222  24799999999854  366789999887777766443   345555443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.48  E-value=0.0047  Score=51.55  Aligned_cols=77  Identities=23%  Similarity=0.399  Sum_probs=54.5

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC----E--EEeCCCcc---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD----V--CINYKTED---  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~----~--~~~~~~~~---  205 (335)
                      +|.++||          +||++++|.+.+..+...|++|+++.+++++.+.+.+    .+..    .  ..|-.+.+   
T Consensus         4 ~gK~alV----------TGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~   73 (272)
T d1xkqa_           4 SNKTVII----------TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQD   73 (272)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------eCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHH
Confidence            5788999          9999999999999999999999999999888766542    3221    1  22333322   


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 -FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+.+..  +++|++++++|
T Consensus        74 ~~~~~~~~~~--g~iDilvnnAG   94 (272)
T d1xkqa_          74 QIINSTLKQF--GKIDVLVNNAG   94 (272)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHHh--CCceEEEeCCc
Confidence             223333333  36999999876

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.48  E-value=0.0015  Score=53.00  Aligned_cols=96  Identities=23%  Similarity=0.253  Sum_probs=59.0

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHh---hCC----CeEEEEecChhhHHHHHH---------cCCC-E
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGK---CQG----VRVFVTAGSEEKLAVCKD---------LGAD-V  197 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~---~~g----~~V~~~~~~~~~~~~~~~---------~g~~-~  197 (335)
                      ..++++++||.          .|  ++.|..++.+++   ..|    .+|+.++..++-.+.+++         .+.+ .
T Consensus        76 ~~l~~g~~VLe----------IG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv  143 (223)
T d1r18a_          76 DHLKPGARILD----------VG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL  143 (223)
T ss_dssp             TTCCTTCEEEE----------ES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred             hccCCCCeEEE----------ec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEE
Confidence            47899999999          87  344555555544   444    389999988876655532         1211 1


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-HHhhccccCCCEEEEE
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII  247 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (335)
                      .+...+..     ..+....+||.|+-+.+-... ...++.|+++|+++..
T Consensus       144 ~~~~~d~~-----~~~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         144 LIVEGDGR-----KGYPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             EEEESCGG-----GCCGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             EEEecccc-----cccccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            12111110     011123579998887765543 5678999999999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0075  Score=49.81  Aligned_cols=78  Identities=23%  Similarity=0.354  Sum_probs=55.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC-CEEE----eCCCcc----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DVCI----NYKTED----  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~-~~~~----~~~~~~----  205 (335)
                      +|..+||          +||++++|.+++..+-..|++|+++.+++++.+.+.    +.+. ..++    |-.+.+    
T Consensus         9 k~Kv~lI----------TGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~   78 (257)
T d1xg5a_           9 RDRLALV----------TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILS   78 (257)
T ss_dssp             TTCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHH
Confidence            4778999          999999999999999999999999999988876653    3332 2222    333322    


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh
Q 019790          206 FVARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+.+..+  ++|++++++|.
T Consensus        79 ~v~~~~~~~g--~iD~lVnnAg~   99 (257)
T d1xg5a_          79 MFSAIRSQHS--GVDICINNAGL   99 (257)
T ss_dssp             HHHHHHHHHC--CCSEEEECCCC
T ss_pred             HHHHHHHhcC--CCCEEEecccc
Confidence            2334444443  69999998874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.45  E-value=0.011  Score=48.82  Aligned_cols=78  Identities=19%  Similarity=0.360  Sum_probs=53.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh-hhHHHHH-----HcCCCEEE---eCCCcc---
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCK-----DLGADVCI---NYKTED---  205 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~-~~~~~~~-----~~g~~~~~---~~~~~~---  205 (335)
                      -+|..+||          +||++++|.+.++.+-..|++|+++.+++ +..+.+.     ..+.....   |-.+.+   
T Consensus         2 L~gK~alI----------TGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~   71 (260)
T d1x1ta1           2 LKGKVAVV----------TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVR   71 (260)
T ss_dssp             CTTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHH
T ss_pred             CCcCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            36788999          99999999999999999999999999864 4443332     24544432   333322   


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 -FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+.+..+  ++|++++++|
T Consensus        72 ~~~~~~~~~~G--~iDiLVnnAG   92 (260)
T d1x1ta1          72 GLVDNAVRQMG--RIDILVNNAG   92 (260)
T ss_dssp             HHHHHHHHHHS--CCSEEEECCC
T ss_pred             HHHHHHHHHhC--CCcEEEeecc
Confidence             2233333333  6999999987

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.011  Score=49.95  Aligned_cols=80  Identities=26%  Similarity=0.414  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-Hc--------CCCEE-E--eCCC
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--------GADVC-I--NYKT  203 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~--------g~~~~-~--~~~~  203 (335)
                      +.-+|.++||          +||++++|.++++.+...|++|+++.+++++.+.+. ++        +.... +  |-.+
T Consensus         8 g~L~gKvalI----------TGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~   77 (297)
T d1yxma1           8 GLLQGQVAIV----------TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN   77 (297)
T ss_dssp             TTTTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC
T ss_pred             CCCCCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC
Confidence            3457899999          999999999999999999999999999988765543 21        22222 2  3333


Q ss_pred             cc-H---HHHHHHHhCCCcccEEEeCCC
Q 019790          204 ED-F---VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       204 ~~-~---~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .. .   .+.+.+..+  ++|++++++|
T Consensus        78 ~~~v~~~~~~~~~~~G--~iDiLVnnAg  103 (297)
T d1yxma1          78 EEEVNNLVKSTLDTFG--KINFLVNNGG  103 (297)
T ss_dssp             HHHHHHHHHHHHHHHS--CCCEEEECCC
T ss_pred             HHHHHHHHHHHHHHhC--CeEEEEeecc
Confidence            22 2   223333333  6999999887

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.44  E-value=0.0078  Score=49.50  Aligned_cols=78  Identities=18%  Similarity=0.289  Sum_probs=54.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEE---EeCCCcc-H---H
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTED-F---V  207 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~-~---~  207 (335)
                      ++..+||          +||++++|.++++.+-..|++|+++.+++++.+.+.    +.+....   .|-.+.+ .   .
T Consensus         9 enKvalI----------TGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~   78 (251)
T d2c07a1           9 ENKVALV----------TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVI   78 (251)
T ss_dssp             SSCEEEE----------ESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            4677899          999999999999999999999999999988776543    3454332   2333322 2   2


Q ss_pred             HHHHHHhCCCcccEEEeCCCh
Q 019790          208 ARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~  228 (335)
                      +.+.+..  +++|++++++|.
T Consensus        79 ~~~~~~~--g~iDilvnnag~   97 (251)
T d2c07a1          79 NKILTEH--KNVDILVNNAGI   97 (251)
T ss_dssp             HHHHHHC--SCCCEEEECCCC
T ss_pred             HHHHHhc--CCceeeeecccc
Confidence            2333332  379999998863

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.43  E-value=0.0081  Score=49.62  Aligned_cols=102  Identities=24%  Similarity=0.323  Sum_probs=67.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec-ChhhHHH----HHHcCCCEE-E--eCCCc----c
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAV----CKDLGADVC-I--NYKTE----D  205 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~-~~~~~~~----~~~~g~~~~-~--~~~~~----~  205 (335)
                      -.|.++||          +||++++|.+.++.+...|++|+++.+ +++..+.    +++.|.+.. +  |-.+.    .
T Consensus         4 L~GK~alI----------TGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~   73 (259)
T d1ja9a_           4 LAGKVALT----------TGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVA   73 (259)
T ss_dssp             TTTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHH
Confidence            46889999          999999999999999999999998764 4443333    345665443 2  33221    1


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh--------------------------hHHHhhccccCCCEEEEEeccC
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS--------------------------YFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +.+.+.+..+  ++|++++++|..                          ..+.+++.|+.+|+++.+....
T Consensus        74 ~~~~~~~~~g--~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~  143 (259)
T d1ja9a_          74 LFDKAVSHFG--GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA  143 (259)
T ss_dssp             HHHHHHHHHS--CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             HHHHHHHHcC--CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccc
Confidence            2333444443  599999988732                          0134566777888887775433

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.42  E-value=0.0098  Score=45.25  Aligned_cols=72  Identities=22%  Similarity=0.411  Sum_probs=52.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHH-HHHcCCCEEEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      -.+.++||          .| +|.+|..+++.+...|+ +++++.|+.++.+. +++++.. +.+.  .++.+.+     
T Consensus        22 l~~~~ilv----------iG-aG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~--~~~~~~l-----   82 (159)
T d1gpja2          22 LHDKTVLV----------VG-AGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHL-----   82 (159)
T ss_dssp             CTTCEEEE----------ES-CCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHH-----
T ss_pred             cccCeEEE----------EC-CCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc--hhHHHHh-----
Confidence            46678888          88 69999999999999998 79999999877654 4567743 3332  2222322     


Q ss_pred             CCcccEEEeCCChh
Q 019790          216 GKGVDVILDCMGAS  229 (335)
Q Consensus       216 ~~~~d~vid~~g~~  229 (335)
                       ..+|+||.|+++.
T Consensus        83 -~~~Divi~atss~   95 (159)
T d1gpja2          83 -ARSDVVVSATAAP   95 (159)
T ss_dssp             -HTCSEEEECCSSS
T ss_pred             -ccCCEEEEecCCC
Confidence             2599999999874

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.41  E-value=0.0075  Score=46.05  Aligned_cols=81  Identities=10%  Similarity=0.026  Sum_probs=58.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH---
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF---  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~---  231 (335)
                      +| .|.+|...+..++..|.+|++.+++++..+.+++.+. +...+.. .        ..  +..|+||-|+....+   
T Consensus         6 IG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~-~--------~~--~~~DiIilavp~~~~~~v   73 (165)
T d2f1ka2           6 VG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDL-S--------LL--QTAKIIFLCTPIQLILPT   73 (165)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCG-G--------GG--TTCSEEEECSCHHHHHHH
T ss_pred             Ee-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeec-c--------cc--cccccccccCcHhhhhhh
Confidence            76 8999999998899999999999999999999888874 4433221 1        11  358999999986544   


Q ss_pred             -HHhhccccCCCEEEEEe
Q 019790          232 -QRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       232 -~~~~~~l~~~G~~v~~g  248 (335)
                       ++....++++--++.++
T Consensus        74 l~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          74 LEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHHGGGSCTTCEEEECC
T ss_pred             hhhhhhhcccccceeecc
Confidence             34444455555555554

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.003  Score=51.25  Aligned_cols=95  Identities=19%  Similarity=0.134  Sum_probs=64.5

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHH----cC-----CC--EEEeC
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LG-----AD--VCINY  201 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~----~g-----~~--~~~~~  201 (335)
                      ..+++|++||.          .|  ++.|..++.+|+..|  .+|+.++.+++..+.+++    .+     .+  .+...
T Consensus        72 ~~l~~g~~VLd----------iG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g  139 (224)
T d1i1na_          72 DQLHEGAKALD----------VG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG  139 (224)
T ss_dssp             TTSCTTCEEEE----------ET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES
T ss_pred             hccCCCCeEEE----------ec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe
Confidence            37899999999          87  667888888888875  489999999887766642    11     11  11111


Q ss_pred             CCccHHHHHHHHhCCCcccEEEeCCChhh-HHHhhccccCCCEEEEE
Q 019790          202 KTEDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII  247 (335)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~  247 (335)
                      +..      .......+||.|+-+..... ....++.|+++|+++..
T Consensus       140 D~~------~~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         140 DGR------MGYAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             CGG------GCCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ecc------cccchhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            110      00112247999998766544 36678999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.33  E-value=0.0066  Score=50.69  Aligned_cols=77  Identities=22%  Similarity=0.391  Sum_probs=54.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC----EE--EeCCCcc---
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VC--INYKTED---  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~----~~--~~~~~~~---  205 (335)
                      +|.++||          +||++++|.+.++.+-..|++|+++.+++++.+.+.    +.+..    ..  .|-.+.+   
T Consensus         3 ~gK~alI----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~   72 (274)
T d1xhla_           3 SGKSVII----------TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQD   72 (274)
T ss_dssp             TTCEEEE----------TTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHH
Confidence            5788999          999999999999999999999999999988776553    33321    12  2333322   


Q ss_pred             -HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 -FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 -~~~~~~~~~~~~~~d~vid~~g  227 (335)
                       +.+.+.+..  +++|++++++|
T Consensus        73 ~~~~~~~~~~--G~iDilVnnAG   93 (274)
T d1xhla_          73 DIINTTLAKF--GKIDILVNNAG   93 (274)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCC
T ss_pred             HHHHHHHHHc--CCceEEEeecc
Confidence             223333333  36999999876

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.33  E-value=0.0091  Score=50.19  Aligned_cols=78  Identities=15%  Similarity=0.347  Sum_probs=54.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-----HcCCCE-EE--eCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-----DLGADV-CI--NYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-----~~g~~~-~~--~~~~~~~----  206 (335)
                      +|.++||          +||++++|.+++..+...|++|+++.+++++.+.+.     +.+... .+  |-.+.+-    
T Consensus        24 ~gK~alI----------TGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~   93 (294)
T d1w6ua_          24 QGKVAFI----------TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNT   93 (294)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHH
Confidence            5789999          999999999999999999999999999987765432     334433 22  2222221    


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~  228 (335)
                      ...+.+..  .++|++++++|.
T Consensus        94 ~~~~~~~~--g~iDilvnnAg~  113 (294)
T d1w6ua_          94 VSELIKVA--GHPNIVINNAAG  113 (294)
T ss_dssp             HHHHHHHT--CSCSEEEECCCC
T ss_pred             hhhhhhhc--cccchhhhhhhh
Confidence            12222222  469999998873

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.31  E-value=0.0062  Score=50.41  Aligned_cols=77  Identities=18%  Similarity=0.315  Sum_probs=54.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-----HHcCCCEE---EeCCCccH----
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----KDLGADVC---INYKTEDF----  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-----~~~g~~~~---~~~~~~~~----  206 (335)
                      .|.++||          +||++++|.++++.+...|++|+++.+++++.+.+     ++.|....   .|-.+.+-    
T Consensus         8 ~gK~alI----------TGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   77 (260)
T d1h5qa_           8 VNKTIIV----------TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   77 (260)
T ss_dssp             TTEEEEE----------ETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence            4778999          99999999999999999999999999987765443     23454432   23333222    


Q ss_pred             HHHHHHHhCCCcccEEEeCCC
Q 019790          207 VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g  227 (335)
                      .+.+.+..  +++|++++++|
T Consensus        78 ~~~~~~~~--g~iDilVnnAg   96 (260)
T d1h5qa_          78 IQQIDADL--GPISGLIANAG   96 (260)
T ss_dssp             HHHHHHHS--CSEEEEEECCC
T ss_pred             HHHHHHHh--CCCcEeccccc
Confidence            22333333  37999999887

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.30  E-value=0.0037  Score=51.92  Aligned_cols=78  Identities=19%  Similarity=0.310  Sum_probs=54.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCC----EE--EeCCCccH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD----VC--INYKTEDF--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~----~~--~~~~~~~~--  206 (335)
                      +|..+||          +||++++|.+.++.+-..|++|+++.+++++.+.+.    +.+..    ..  .|-.+.+-  
T Consensus         4 ~gKvalV----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~   73 (264)
T d1spxa_           4 AEKVAII----------TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQD   73 (264)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEE----------eCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHH
Confidence            5778899          999999999999999999999999999988776653    23321    12  23333222  


Q ss_pred             --HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 --VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 --~~~~~~~~~~~~~d~vid~~g~  228 (335)
                        .+.+.+..  +++|++++++|.
T Consensus        74 ~~~~~~~~~~--g~iDilvnnAG~   95 (264)
T d1spxa_          74 EILSTTLGKF--GKLDILVNNAGA   95 (264)
T ss_dssp             HHHHHHHHHH--SCCCEEEECCC-
T ss_pred             HHHHHHHHHh--CCCCEeeccccc
Confidence              22333333  369999999873

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.29  E-value=0.011  Score=49.02  Aligned_cols=44  Identities=34%  Similarity=0.354  Sum_probs=40.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      -+|.++||          +||++++|.+++..+-..|++|+++.|++++.+.+.
T Consensus        12 L~GK~alI----------TGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          12 LQGKKVIV----------TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV   55 (269)
T ss_dssp             GTTCEEEE----------SSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             cCCCEEEE----------eCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            46889999          999999999999999999999999999999887664

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0043  Score=49.31  Aligned_cols=75  Identities=17%  Similarity=0.201  Sum_probs=54.4

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      ..+|+|          +||+|.+|..++..+...|.+|++++|+.++.......+... +..+-.+. +.+.+...  +.
T Consensus         3 ~kkIlV----------~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~~gD~~d~-~~l~~al~--~~   68 (205)
T d1hdoa_           3 VKKIAI----------FGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHV-VVGDVLQA-ADVDKTVA--GQ   68 (205)
T ss_dssp             CCEEEE----------ESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEE-EESCTTSH-HHHHHHHT--TC
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccccc-ccccccch-hhHHHHhc--CC
Confidence            367889          999999999999988889999999999988765444444433 33333332 34555443  58


Q ss_pred             cEEEeCCCh
Q 019790          220 DVILDCMGA  228 (335)
Q Consensus       220 d~vid~~g~  228 (335)
                      |+||.++|.
T Consensus        69 d~vi~~~g~   77 (205)
T d1hdoa_          69 DAVIVLLGT   77 (205)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEEecc
Confidence            999999874

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.24  E-value=0.0077  Score=48.78  Aligned_cols=101  Identities=18%  Similarity=0.225  Sum_probs=68.5

Q ss_pred             HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-E-EEeCC
Q 019790          129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-V-CINYK  202 (335)
Q Consensus       129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~-~~~~~  202 (335)
                      ..+...+++++|++||=          .|  ++.|..+..+++. +.+|++++.++...+.+++    .+.. . .+..+
T Consensus         6 ~~l~~~~~~~~~~rILD----------iG--cGtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d   72 (234)
T d1xxla_           6 GLMIKTAECRAEHRVLD----------IG--AGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGT   72 (234)
T ss_dssp             HHHHHHHTCCTTCEEEE----------ES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB
T ss_pred             HHHHHHhCCCCCCEEEE----------eC--CcCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccc
Confidence            34557889999999998          77  5678888888875 7899999999887776643    3322 2 22212


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCCCh-------hhHHHhhccccCCCEEEEEe
Q 019790          203 TEDFVARVKEETGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      ...+.      ...+.||+|+-+-.-       ..+..+.+.|+|+|+++..-
T Consensus        73 ~~~~~------~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          73 AESLP------FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             TTBCC------SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccc------ccccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            11110      123469999864332       23577889999999988753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.22  E-value=0.014  Score=48.02  Aligned_cols=70  Identities=20%  Similarity=0.320  Sum_probs=49.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH----HHcCCCEE---EeCCCcc----HHHHHHHHhCCCcccEEEe
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVC---INYKTED----FVARVKEETGGKGVDVILD  224 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~d~vid  224 (335)
                      +||++++|.+.+..+-..|++|+++.+++++.+.+    ++.+.+..   .|-.+.+    +.+.+.+..  +++|++++
T Consensus         7 TGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iDilVn   84 (255)
T d1gega_           7 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL--GGFDVIVN   84 (255)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT--TCCCEEEE
T ss_pred             cCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh--CCccEEEe
Confidence            99999999999999988999999999998877654    34454432   2333322    223333333  36999999


Q ss_pred             CCC
Q 019790          225 CMG  227 (335)
Q Consensus       225 ~~g  227 (335)
                      ++|
T Consensus        85 nAG   87 (255)
T d1gega_          85 NAG   87 (255)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            887

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.13  E-value=0.0082  Score=49.49  Aligned_cols=78  Identities=12%  Similarity=0.143  Sum_probs=52.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE----EEeCC-Cc-cH--
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV----CINYK-TE-DF--  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~----~~~~~-~~-~~--  206 (335)
                      .|.++||          +||++++|.+++..+-..|++|+++.++.++.+.+.+    .+...    ..|.. +. .+  
T Consensus         4 ~gK~vlI----------TGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   73 (254)
T d1sbya1           4 TNKNVIF----------VAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHH
T ss_pred             CCCEEEE----------ecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHH
Confidence            4788999          9999999999999999999999999876665444432    22222    12322 21 12  


Q ss_pred             -HHHHHHHhCCCcccEEEeCCCh
Q 019790          207 -VARVKEETGGKGVDVILDCMGA  228 (335)
Q Consensus       207 -~~~~~~~~~~~~~d~vid~~g~  228 (335)
                       .+.+.+..+  ++|++++++|.
T Consensus        74 ~~~~~~~~~g--~iDilvnnAG~   94 (254)
T d1sbya1          74 LLKKIFDQLK--TVDILINGAGI   94 (254)
T ss_dssp             HHHHHHHHHS--CCCEEEECCCC
T ss_pred             HHHHHHHHcC--CCCEEEeCCCC
Confidence             233344443  69999999984

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.11  E-value=0.017  Score=44.18  Aligned_cols=95  Identities=12%  Similarity=0.051  Sum_probs=62.3

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      +.+|||          .| +|.+|..+++.+...|.+|++++|+.++.+.+.+.......................  ..
T Consensus         2 ~K~Ili----------iG-aG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~--~~   68 (182)
T d1e5qa1           2 TKSVLM----------LG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KH   68 (182)
T ss_dssp             CCEEEE----------EC-CSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT--TS
T ss_pred             CCEEEE----------EC-CCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh--cc
Confidence            467888          87 699999999999988999999999999998887643333332233222223333332  57


Q ss_pred             cEEEeCCChhhH-HHhhccccCCCEEEEE
Q 019790          220 DVILDCMGASYF-QRNLGSLNIDGRLFII  247 (335)
Q Consensus       220 d~vid~~g~~~~-~~~~~~l~~~G~~v~~  247 (335)
                      |.++.+...... .....++..+-.++..
T Consensus        69 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~   97 (182)
T d1e5qa1          69 DLVISLIPYTFHATVIKSAIRQKKHVVTT   97 (182)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHTCEEECS
T ss_pred             ceeEeeccchhhhHHHHHHHhhccceeec
Confidence            888888876543 3334444555555543

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.07  E-value=0.00055  Score=56.31  Aligned_cols=73  Identities=29%  Similarity=0.334  Sum_probs=52.1

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCcc----HHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED----FVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~  214 (335)
                      .|.++||          +||++++|.++++.+...|++|+++.++++..+.+.    ....|-.+.+    +.+.+.+..
T Consensus         6 ~gK~~lI----------TGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           6 VSRSVLV----------TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhc
Confidence            5789999          999999999999999999999999999876544321    1223444422    223334443


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                      +  ++|++++++|
T Consensus        72 g--~iDiLVnnAG   82 (237)
T d1uzma1          72 G--PVEVLVSNAG   82 (237)
T ss_dssp             S--SCSEEEEECS
T ss_pred             C--CceEEEeeec
Confidence            3  6999999887

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.05  E-value=0.024  Score=43.56  Aligned_cols=87  Identities=15%  Similarity=0.079  Sum_probs=56.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeC------CCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY------KTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      .| .|.+|++++..+...|.+|++.++++++.+.+++.+.......      ..........+..  +.+|++|-|+...
T Consensus         7 iG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--~~aD~iii~v~~~   83 (184)
T d1bg6a2           7 LG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV--KDADVILIVVPAI   83 (184)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH--TTCSEEEECSCGG
T ss_pred             EC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh--cCCCEEEEEEchh
Confidence            77 6999999999999999999999999999988876553221100      0000001122222  3589999999886


Q ss_pred             hHH----HhhccccCCCEEE
Q 019790          230 YFQ----RNLGSLNIDGRLF  245 (335)
Q Consensus       230 ~~~----~~~~~l~~~G~~v  245 (335)
                      ...    +....+.++-.++
T Consensus        84 ~~~~~~~~i~~~l~~~~~iv  103 (184)
T d1bg6a2          84 HHASIAANIASYISEGQLII  103 (184)
T ss_dssp             GHHHHHHHHGGGCCTTCEEE
T ss_pred             HHHHHHHHhhhccCCCCEEE
Confidence            543    3445555555444

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.02  E-value=0.016  Score=49.00  Aligned_cols=77  Identities=21%  Similarity=0.285  Sum_probs=52.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC---------hhhHHH----HHHcCCCEEEeCCCcc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------EEKLAV----CKDLGADVCINYKTED  205 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~---------~~~~~~----~~~~g~~~~~~~~~~~  205 (335)
                      +|..+||          +|+++++|.+.++.+-..|++|++..++         ++..+.    +...+.....+..+..
T Consensus         6 ~gKvalI----------TGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   75 (302)
T d1gz6a_           6 DGRVVLV----------TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVE   75 (302)
T ss_dssp             TTCEEEE----------TTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGG
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHH
Confidence            5788999          9999999999999999999999998643         223322    2334444555555533


Q ss_pred             H----HHHHHHHhCCCcccEEEeCCC
Q 019790          206 F----VARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 ~----~~~~~~~~~~~~~d~vid~~g  227 (335)
                      -    .+.+.+..  +++|++++++|
T Consensus        76 ~~~~~v~~~~~~~--G~iDiLVnNAG   99 (302)
T d1gz6a_          76 AGEKLVKTALDTF--GRIDVVVNNAG   99 (302)
T ss_dssp             GHHHHHHHHHHHT--SCCCEEEECCC
T ss_pred             HHHHHHHHHHHHc--CCCCEEEECCc
Confidence            2    22233333  36999999987

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.98  E-value=0.055  Score=39.30  Aligned_cols=71  Identities=14%  Similarity=0.157  Sum_probs=52.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY  230 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~  230 (335)
                      .| .|.+|..+++.+...|.+|++++.++++.+.+++ ++.. ++..+..+.  ...+..+-..+|.++.+++++.
T Consensus         6 ~G-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~--~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           6 AG-IGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKI--KTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSH--HHHHHTTTTTCSEEEECCSCHH
T ss_pred             EC-CCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccch--hhhhhcChhhhhhhcccCCcHH
Confidence            77 6999999999999999999999999999888865 4543 443333332  2333444457899999888764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.96  E-value=0.024  Score=46.48  Aligned_cols=102  Identities=21%  Similarity=0.285  Sum_probs=66.9

Q ss_pred             CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEEeCC--Ccc----H
Q 019790          139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYK--TED----F  206 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~--~~~----~  206 (335)
                      .|.++||          +|++|  ++|.+.++.+...|++|++..++++..+.+.    ..+....+..+  +..    +
T Consensus         7 ~gK~alI----------TGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (256)
T d1ulua_           7 SGKKALV----------MGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDAL   76 (256)
T ss_dssp             TTCEEEE----------ESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHH
T ss_pred             CCCEEEE----------ECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHH
Confidence            5788999          99876  7999999999899999999998876554443    23444444332  221    2


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh---------------hH---------------HHhhccccCCCEEEEEeccCC
Q 019790          207 VARVKEETGGKGVDVILDCMGAS---------------YF---------------QRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      .+.+.+..+  ++|++++++|..               .+               +.....++++|+++.++....
T Consensus        77 ~~~~~~~~g--~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          77 FAGVKEAFG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             HHHHHHHHS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             HHHHHHhcC--CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            233333433  699999988621               00               133455677899998876554

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.95  E-value=0.0089  Score=48.40  Aligned_cols=92  Identities=23%  Similarity=0.294  Sum_probs=65.4

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      +.++.+||-          .|  ++.|..+..+++. |++|++++.+++..+.+++.+....+..+..++.      ...
T Consensus        40 ~~~~~~vLD----------iG--cG~G~~~~~l~~~-~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~------~~~  100 (246)
T d2avna1          40 LKNPCRVLD----------LG--GGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP------FPS  100 (246)
T ss_dssp             CCSCCEEEE----------ET--CTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC------SCT
T ss_pred             cCCCCEEEE----------EC--CCCchhccccccc-ceEEEEeecccccccccccccccccccccccccc------ccc
Confidence            456778887          66  4578888888874 9999999999999999998766555544433321      122


Q ss_pred             CcccEEEeCCCh--------hhHHHhhccccCCCEEEEE
Q 019790          217 KGVDVILDCMGA--------SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       217 ~~~d~vid~~g~--------~~~~~~~~~l~~~G~~v~~  247 (335)
                      ..||+|+.....        ..+..+.+.|++||.++..
T Consensus       101 ~~fD~ii~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         101 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccceeeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            479998865432        1246778899999988754

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.84  E-value=0.015  Score=49.52  Aligned_cols=102  Identities=18%  Similarity=0.219  Sum_probs=66.0

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHH----cC----------
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LG----------  194 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~----~g----------  194 (335)
                      +....+++||++||-          .|  .+.|.++..+|+..|.  +|+.++.+++..+.+++    .+          
T Consensus        90 Il~~l~i~pG~rVLE----------~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~  157 (324)
T d2b25a1          90 ILSMMDINPGDTVLE----------AG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEE  157 (324)
T ss_dssp             HHHHHTCCTTCEEEE----------EC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSC
T ss_pred             HHHHhCCCCCCEEEE----------ec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhc
Confidence            335679999999999          66  4558889999998864  89999999988877653    11          


Q ss_pred             -C-CE-EEeCCCccHHHHHHHHhCCCcccEEEeCCCh--hhHHHhhccccCCCEEEEEe
Q 019790          195 -A-DV-CINYKTEDFVARVKEETGGKGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       195 -~-~~-~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                       . +. ....+-..+...+    ....||.||--+..  ..+..+.+.|+|+|+++.+-
T Consensus       158 ~~~nv~~~~~di~~~~~~~----~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~  212 (324)
T d2b25a1         158 WPDNVDFIHKDISGATEDI----KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV  212 (324)
T ss_dssp             CCCCEEEEESCTTCCC-----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred             cccceeEEecchhhccccc----CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence             1 11 1111111111111    12368887754443  45788999999999998764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.83  E-value=0.012  Score=48.22  Aligned_cols=77  Identities=22%  Similarity=0.375  Sum_probs=50.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHh---hCCCeEEEEecChhhHHHHHH---cCCCE-E--EeCCCcc-H---H
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGK---CQGVRVFVTAGSEEKLAVCKD---LGADV-C--INYKTED-F---V  207 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~---~~g~~V~~~~~~~~~~~~~~~---~g~~~-~--~~~~~~~-~---~  207 (335)
                      .+|||          +|+++++|.++++.+.   ..|++|++++|++++.+.+++   .+... +  .|-.+.+ .   .
T Consensus         3 KtilI----------TGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   72 (248)
T d1snya_           3 NSILI----------TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV   72 (248)
T ss_dssp             SEEEE----------SCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred             CEEEE----------eCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHH
Confidence            36899          9999999999886553   358999999999887655542   22222 2  2433432 2   2


Q ss_pred             HHHHHHhCCCcccEEEeCCC
Q 019790          208 ARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g  227 (335)
                      +.+++.....++|++++++|
T Consensus        73 ~~i~~~~~~~~iDiLvnNAg   92 (248)
T d1snya_          73 ADIEGVTKDQGLNVLFNNAG   92 (248)
T ss_dssp             HHHHHHHGGGCCSEEEECCC
T ss_pred             hhhHHHhhcCCcceEEeecc
Confidence            33333334457999999876

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.82  E-value=0.00078  Score=55.19  Aligned_cols=95  Identities=18%  Similarity=0.223  Sum_probs=63.2

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccH-------HHHHHHH
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDF-------VARVKEE  213 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~  213 (335)
                      .+|||          +|+++++|.+.++.+...|++|+++++++++..      ........+.++       .+.+...
T Consensus         3 gkVlI----------TGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (235)
T d1ooea_           3 GKVIV----------YGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASS   66 (235)
T ss_dssp             EEEEE----------ETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHH
Confidence            46899          999999999999999999999999998765321      111111111111       2233334


Q ss_pred             hCCCcccEEEeCCChh------------hH---------------HHhhccccCCCEEEEEeccC
Q 019790          214 TGGKGVDVILDCMGAS------------YF---------------QRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       214 ~~~~~~d~vid~~g~~------------~~---------------~~~~~~l~~~G~~v~~g~~~  251 (335)
                      ....++|++++++|..            .+               ...++.|+++|+++.++...
T Consensus        67 ~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~  131 (235)
T d1ooea_          67 LQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAA  131 (235)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGG
T ss_pred             hcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHH
Confidence            4556799999988721            01               23456678889999987654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.79  E-value=0.051  Score=40.59  Aligned_cols=77  Identities=17%  Similarity=0.278  Sum_probs=55.3

Q ss_pred             ccccchHHHHHHH-HHhhCCCeEEEEecChhhHHHHHH-cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH
Q 019790          156 HGGSSGIGTFAIQ-MGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~-~a~~~g~~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  233 (335)
                      +| .|.+|.+.++ +++.-+.+|++.++++++.+.+++ ++... .+.... .          ...|+||-|+-...+..
T Consensus         6 IG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~~-v----------~~~Div~lavkP~~~~~   72 (152)
T d1yqga2           6 LG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLPE-L----------HSDDVLILAVKPQDMEA   72 (152)
T ss_dssp             EC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCCC-C----------CTTSEEEECSCHHHHHH
T ss_pred             Ec-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-cccccc-c----------cccceEEEecCHHHHHH
Confidence            66 7999998877 455434799999999999888765 56533 322221 1          24799999998877888


Q ss_pred             hhccccCCCEEE
Q 019790          234 NLGSLNIDGRLF  245 (335)
Q Consensus       234 ~~~~l~~~G~~v  245 (335)
                      .++.+++.++++
T Consensus        73 v~~~l~~~~~~v   84 (152)
T d1yqga2          73 ACKNIRTNGALV   84 (152)
T ss_dssp             HHTTCCCTTCEE
T ss_pred             hHHHHhhcccEE
Confidence            887887766654

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=95.79  E-value=0.02  Score=47.71  Aligned_cols=101  Identities=18%  Similarity=0.092  Sum_probs=68.4

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--CE-EEeCCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--DV-CINYKT  203 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~~-~~~~~~  203 (335)
                      |.....+.++.+||=          .|  ++.|..+..+++..|++|++++.++...+.+++    .|.  .. +...+.
T Consensus        59 l~~~~~l~~~~~vLD----------iG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~  126 (282)
T d2o57a1          59 LAMTGVLQRQAKGLD----------LG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF  126 (282)
T ss_dssp             HHHTTCCCTTCEEEE----------ET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT
T ss_pred             HHHhcCCCCCCEEEE----------eC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccc
Confidence            445678899999998          77  457778888888889999999999988776653    232  12 222222


Q ss_pred             ccHHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEec
Q 019790          204 EDFVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       204 ~~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .++.      ...+.||+|+-.-.     .  ..+..+.+.|+|+|+++....
T Consensus       127 ~~l~------~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~  173 (282)
T d2o57a1         127 LEIP------CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDP  173 (282)
T ss_dssp             TSCS------SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccc------ccccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            2110      12246999975322     1  235778999999999987643

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=95.78  E-value=0.0097  Score=46.43  Aligned_cols=97  Identities=12%  Similarity=0.162  Sum_probs=63.8

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC--C-EEEeCCCcc
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCINYKTED  205 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~--~-~~~~~~~~~  205 (335)
                      ...++.++++||=          .|  .+.|..++.+|+. +.+|++++.+++..+.+++    .|.  . .++.   .+
T Consensus        27 ~~l~~~~g~~VLD----------iG--cGsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gd   90 (186)
T d1l3ia_          27 CLAEPGKNDVAVD----------VG--CGTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GD   90 (186)
T ss_dssp             HHHCCCTTCEEEE----------ES--CTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SC
T ss_pred             HhcCCCCCCEEEE----------EE--CCeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cc
Confidence            4568899999887          76  3445556667765 6799999999988777753    443  2 1222   22


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh----hHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~----~~~~~~~~l~~~G~~v~~g  248 (335)
                      ..+.   ......||.|+-..+..    .+..+.+.|+++|+++...
T Consensus        91 a~~~---~~~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          91 APEA---LCKIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             HHHH---HTTSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             hhhc---ccccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            2222   22335799998655432    3567788999999987653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.74  E-value=0.012  Score=48.26  Aligned_cols=70  Identities=13%  Similarity=-0.031  Sum_probs=49.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCCEEEeCCC-ccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GADVCINYKT-EDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      +|+++++|.+++..+...|++|++..++.++.+.++..    ....+.+..+ ..+.+.+.+..+  ++|++++++|
T Consensus         6 TGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G--~iDiLVnNAg   80 (252)
T d1zmta1           6 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYG--QVDVLVSNDI   80 (252)
T ss_dssp             SSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHS--CCCEEEEECC
T ss_pred             ECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcC--CCCEEEECCc
Confidence            99999999999999999999999999988877776542    2222333222 223344444443  6999998765

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.65  E-value=0.018  Score=46.09  Aligned_cols=98  Identities=16%  Similarity=0.217  Sum_probs=66.6

Q ss_pred             HHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE--EEeCCCcc
Q 019790          132 FMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV--CINYKTED  205 (335)
Q Consensus       132 ~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~  205 (335)
                      .+.++++++++||-          +|  ++.|..+..+++. |++|++++.+++..+.+++    .+...  +...+...
T Consensus         8 l~~~~l~~~~rVLD----------iG--cG~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~   74 (231)
T d1vl5a_           8 MQIAALKGNEEVLD----------VA--TGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ   74 (231)
T ss_dssp             HHHHTCCSCCEEEE----------ET--CTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C
T ss_pred             HHhcCCCCcCEEEE----------ec--ccCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccccc
Confidence            46789999999998          87  4478888788765 7899999999987777653    34321  22222221


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                      +     . ...+.||+|+-.-.     .  ..+..+.+.|+|+|+++...
T Consensus        75 l-----~-~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          75 M-----P-FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             C-----C-SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c-----c-ccccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            1     0 12346999986433     1  23577899999999998763

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.54  E-value=0.039  Score=42.26  Aligned_cols=79  Identities=10%  Similarity=0.107  Sum_probs=53.1

Q ss_pred             HHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH-cC---CCEEEeCCCcc
Q 019790          130 TVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG---ADVCINYKTED  205 (335)
Q Consensus       130 ~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~-~g---~~~~~~~~~~~  205 (335)
                      +|.......++.+++|          .| +|+.+.+++..+...+.+|+++.|+.++.+.+.+ +.   ....+....  
T Consensus         8 ~l~~~~~~~~~k~vlI----------lG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~--   74 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLI----------LG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS--   74 (171)
T ss_dssp             HHHHTTCCCTTCEEEE----------EC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG--
T ss_pred             HHHHcCCCCCCCEEEE----------EC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc--
Confidence            3433333457789999          88 7999999988888777899999999988776643 22   212222111  


Q ss_pred             HHHHHHHHhCCCcccEEEeCCChh
Q 019790          206 FVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                              ..-..+|++++|++..
T Consensus        75 --------~~~~~~diiIN~tp~g   90 (171)
T d1p77a1          75 --------IPLQTYDLVINATSAG   90 (171)
T ss_dssp             --------CCCSCCSEEEECCCC-
T ss_pred             --------ccccccceeeeccccc
Confidence                    1124689999998854

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.54  E-value=0.028  Score=46.01  Aligned_cols=83  Identities=17%  Similarity=0.299  Sum_probs=53.8

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhh-------HHHHHHcCCCEEE---eCCC
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEK-------LAVCKDLGADVCI---NYKT  203 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~-------~~~~~~~g~~~~~---~~~~  203 (335)
                      ..++|+.++||          +||++++|.+++..+-..|+ +|+++.|++..       .+.++..|....+   |-.+
T Consensus         4 ~~~~p~gt~lV----------TGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d   73 (259)
T d2fr1a1           4 DEWKPTGTVLV----------TGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD   73 (259)
T ss_dssp             CCCCCCSEEEE----------ETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC
T ss_pred             cccCCcCEEEE----------ECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch
Confidence            35688889999          99999999999998888898 57777775321       2233445654322   3333


Q ss_pred             ccHHHHHHHH-hCCCcccEEEeCCC
Q 019790          204 EDFVARVKEE-TGGKGVDVILDCMG  227 (335)
Q Consensus       204 ~~~~~~~~~~-~~~~~~d~vid~~g  227 (335)
                      ..-.+.+.+. ....++|.++.+.|
T Consensus        74 ~~~~~~~~~~i~~~~~i~~vv~~ag   98 (259)
T d2fr1a1          74 RESVRELLGGIGDDVPLSAVFHAAA   98 (259)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred             HHHHHHhhccccccccccccccccc
Confidence            3322333332 23346899998887

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.48  E-value=0.052  Score=47.55  Aligned_cols=103  Identities=21%  Similarity=0.271  Sum_probs=66.5

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc-----------CC---
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL-----------GA---  195 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~-----------g~---  195 (335)
                      +.+..++++|+++|=          +|  +++|..+.++|+..|+ +|++++.++...+.++..           +.   
T Consensus       208 Il~~l~Lkpgd~fLD----------LG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~  275 (406)
T d1u2za_         208 VYQQCQLKKGDTFMD----------LG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLN  275 (406)
T ss_dssp             HHHHTTCCTTCEEEE----------ES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred             HHHHhCCCCCCEEEe----------CC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccc
Confidence            337789999998777          77  7789999999999987 899999998877666431           11   


Q ss_pred             CEEEeCCCccH-HHHHHHHhCCCcccEEEeCC---Ch---hhHHHhhccccCCCEEEEE
Q 019790          196 DVCINYKTEDF-VARVKEETGGKGVDVILDCM---GA---SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       196 ~~~~~~~~~~~-~~~~~~~~~~~~~d~vid~~---g~---~~~~~~~~~l~~~G~~v~~  247 (335)
                      ...+......+ ........  ..+|+++-..   +.   ..+.++++.|++||+++..
T Consensus       276 ~~~~~~~~~f~~~~~~d~~~--~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~  332 (406)
T d1u2za_         276 NVEFSLKKSFVDNNRVAELI--PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL  332 (406)
T ss_dssp             CEEEEESSCSTTCHHHHHHG--GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             cceeeeeechhhcccccccc--ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEe
Confidence            11111111111 11222222  2478887532   22   2356788999999999875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.48  E-value=0.089  Score=39.54  Aligned_cols=108  Identities=18%  Similarity=0.219  Sum_probs=76.4

Q ss_pred             HHHHHhcC-CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHH
Q 019790          129 STVFMTSH-LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV  207 (335)
Q Consensus       129 ~~l~~~~~-~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  207 (335)
                      -++.+..+ +-.|.+++|          .| -|-+|.-.++-++.+|++|+++..++-+.-++.--|.. +.        
T Consensus        11 d~i~r~t~~~laGk~vvV----------~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~-v~--------   70 (163)
T d1v8ba1          11 DGLMRATDFLISGKIVVI----------CG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-VV--------   70 (163)
T ss_dssp             HHHHHHHCCCCTTSEEEE----------EC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-EC--------
T ss_pred             HHHHHHhCceecCCEEEE----------ec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCc-cC--------
Confidence            34444444 468889988          77 89999999999999999999999998766555444442 22        


Q ss_pred             HHHHHHhCCCcccEEEeCCChhh--HHHhhccccCCCEEEEEeccCCCccccChhHH
Q 019790          208 ARVKEETGGKGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSL  262 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~  262 (335)
                       .+.+..  ...|+++-++|...  ....++.|+++.-+.-+|-..   .+++...+
T Consensus        71 -~~~~a~--~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd---~EIdv~~L  121 (163)
T d1v8ba1          71 -TLDEIV--DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD---DEIQVNEL  121 (163)
T ss_dssp             -CHHHHT--TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTT---TSBCHHHH
T ss_pred             -chhHcc--ccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccccc---hhhhhHHH
Confidence             122222  24799999999865  366789999888887776543   34555443

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0031  Score=51.22  Aligned_cols=96  Identities=18%  Similarity=0.117  Sum_probs=63.2

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC---CEEEeCCCccHHHHHHHHh
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTEDFVARVKEET  214 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~  214 (335)
                      .+|.+||-          +|  ++.|..+..+++..+.+|++++.++...+.+++...   ..+. ....+. ..+....
T Consensus        52 ~~g~~VLd----------IG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~-~~~~~~-~~~~~~~  117 (229)
T d1zx0a1          52 SKGGRVLE----------VG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVI-PLKGLW-EDVAPTL  117 (229)
T ss_dssp             TTCEEEEE----------EC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEE-EEESCH-HHHGGGS
T ss_pred             cCCCeEEE----------ee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccc-cccccc-ccccccc
Confidence            67888998          77  667888899998877899999999999888875321   1111 111222 2233333


Q ss_pred             CCCcccEEE-eCCChh-----------hHHHhhccccCCCEEEEE
Q 019790          215 GGKGVDVIL-DCMGAS-----------YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       215 ~~~~~d~vi-d~~g~~-----------~~~~~~~~l~~~G~~v~~  247 (335)
                      ..+.||.++ |++...           .+..+.+.|+|||+++..
T Consensus       118 ~~~~fD~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         118 PDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             CTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             ccccccceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            445798884 654321           235577889999998753

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=95.21  E-value=0.043  Score=39.87  Aligned_cols=87  Identities=16%  Similarity=0.137  Sum_probs=59.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE-eCCCccHHHHHHHHhCCCcccEEEeCCChhh-H--
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMGASY-F--  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~--  231 (335)
                      .| .|.+|..+++.+...|.+|++++.++++.+.+++.+...++ |..+...   +. ..+-..+|.++-++++.. .  
T Consensus         6 iG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~---l~-~a~i~~a~~vi~~~~~~~~~~~   80 (134)
T d2hmva1           6 IG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENE---LL-SLGIRNFEYVIVAIGANIQAST   80 (134)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTH---HH-HHTGGGCSEEEECCCSCHHHHH
T ss_pred             EC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchh---hh-ccCCccccEEEEEcCchHHhHH
Confidence            65 79999999999999999999999999999999887765544 2222322   22 223346888888887642 2  


Q ss_pred             -HHhhccccCCCEEEEE
Q 019790          232 -QRNLGSLNIDGRLFII  247 (335)
Q Consensus       232 -~~~~~~l~~~G~~v~~  247 (335)
                       ......+.+..+++..
T Consensus        81 ~~~~~~~~~~~~~iiar   97 (134)
T d2hmva1          81 LTTLLLKELDIPNIWVK   97 (134)
T ss_dssp             HHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHcCCCcEEee
Confidence             2223334455566554

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.21  E-value=0.033  Score=45.92  Aligned_cols=78  Identities=19%  Similarity=0.177  Sum_probs=51.5

Q ss_pred             CCCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHHHHH---H-cCCCEEE--eCCCcc----
Q 019790          138 SPGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---D-LGADVCI--NYKTED----  205 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~---~-~g~~~~~--~~~~~~----  205 (335)
                      -+|.++||          +|++|  ++|.+.++.+...|++|+++.++++..+.++   + .+...+.  |..+..    
T Consensus         3 L~gK~alI----------TGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~   72 (274)
T d2pd4a1           3 LKGKKGLI----------VGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKS   72 (274)
T ss_dssp             TTTCEEEE----------ECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred             CCCCEEEE----------ECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHH
Confidence            46889999          99766  7999999999999999999999865443333   2 2222222  222221    


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC
Q 019790          206 FVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      ..+.+.+..  .++|+++.+.|
T Consensus        73 ~~~~~~~~~--g~id~lV~nag   92 (274)
T d2pd4a1          73 LYNSVKKDL--GSLDFIVHSVA   92 (274)
T ss_dssp             HHHHHHHHT--SCEEEEEECCC
T ss_pred             HHHHHHHHc--CCCCeEEeecc
Confidence            123333333  36899998876

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.99  E-value=0.051  Score=44.14  Aligned_cols=94  Identities=19%  Similarity=0.246  Sum_probs=59.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEe-cChhhHHHH----HHcCCCEE-E--eCCCccH----HHHHHHHhCCCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADVC-I--NYKTEDF----VARVKEETGGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~-~~~~~~~~~----~~~g~~~~-~--~~~~~~~----~~~~~~~~~~~~~d~vi  223 (335)
                      +||++++|.+.++.+-..|++|++.+ ++++..+.+    ++.+.+.. +  |-.+.+-    .+.+.+..  +++|+++
T Consensus         7 TGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~--g~iDiLV   84 (244)
T d1edoa_           7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW--GTIDVVV   84 (244)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS--SCCSEEE
T ss_pred             eCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc--CCCCccc
Confidence            99999999999999999999998875 455555444    33454322 2  3333221    22333333  3699999


Q ss_pred             eCCChh-----------hH---------------HHhhccc--cCCCEEEEEeccC
Q 019790          224 DCMGAS-----------YF---------------QRNLGSL--NIDGRLFIIGTQG  251 (335)
Q Consensus       224 d~~g~~-----------~~---------------~~~~~~l--~~~G~~v~~g~~~  251 (335)
                      +++|..           .+               +.+++.|  ..+|+++.++...
T Consensus        85 nnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  140 (244)
T d1edoa_          85 NNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV  140 (244)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             cccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChh
Confidence            988731           01               2345555  4579999987654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.93  E-value=0.13  Score=39.56  Aligned_cols=94  Identities=12%  Similarity=0.137  Sum_probs=57.1

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHH----HcC---CCE--EEeCCCccHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK----DLG---ADV--CINYKTEDFV  207 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~----~~g---~~~--~~~~~~~~~~  207 (335)
                      -.+.+++|          .| +|+.+.+++..+...|+ +++++.|+.++.+.+.    .++   ...  ..+..+.   
T Consensus        16 l~~k~vlI----------lG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---   81 (182)
T d1vi2a1          16 IKGKTMVL----------LG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQ---   81 (182)
T ss_dssp             CTTCEEEE----------EC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCH---
T ss_pred             cCCCEEEE----------EC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccc---
Confidence            35678999          88 69999999998888998 7999999876554332    221   111  2222221   


Q ss_pred             HHHHHHhCCCcccEEEeCCChhhH-------HHhhccccCCCEEEEE
Q 019790          208 ARVKEETGGKGVDVILDCMGASYF-------QRNLGSLNIDGRLFII  247 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~~~~-------~~~~~~l~~~G~~v~~  247 (335)
                      +.+.+.+  ..+|++|+|++-...       ..-...++++..++.+
T Consensus        82 ~~~~~~~--~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di  126 (182)
T d1vi2a1          82 QAFAEAL--ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTEC  126 (182)
T ss_dssp             HHHHHHH--HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEEC
T ss_pred             cchhhhh--cccceeccccCCccccccchhhhhHHHhhhcchhhHHh
Confidence            1222222  258999999874321       1113445666766665

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.92  E-value=0.076  Score=40.23  Aligned_cols=85  Identities=15%  Similarity=0.098  Sum_probs=60.2

Q ss_pred             ccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCC-CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH-
Q 019790          156 HGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~-  231 (335)
                      .| .|.+|...+..++..|.  +|++.+++++..+.+++.+. +.........         .....|+|+-|+..... 
T Consensus         7 IG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---------~~~~~dlIila~p~~~~~   76 (171)
T d2g5ca2           7 VG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKV---------EDFSPDFVMLSSPVRTFR   76 (171)
T ss_dssp             ES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGG---------GGTCCSEEEECSCHHHHH
T ss_pred             Ec-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhh---------hccccccccccCCchhhh
Confidence            76 89999999999998885  89999999999999998875 3433221110         01257999999987543 


Q ss_pred             ---HHhhccccCCCEEEEEecc
Q 019790          232 ---QRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       232 ---~~~~~~l~~~G~~v~~g~~  250 (335)
                         ....+.++++.-++.++..
T Consensus        77 ~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          77 EIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhhccccccccccccccc
Confidence               3445566666666666544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=94.77  E-value=0.05  Score=44.11  Aligned_cols=95  Identities=17%  Similarity=0.246  Sum_probs=61.5

Q ss_pred             ccccchHHHHHHHHHhhCCCe-------EEEEecChhhHHHHH----HcCCCEE-E--eCCCcc----HHHHHHHHhCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVR-------VFVTAGSEEKLAVCK----DLGADVC-I--NYKTED----FVARVKEETGGK  217 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~-------V~~~~~~~~~~~~~~----~~g~~~~-~--~~~~~~----~~~~~~~~~~~~  217 (335)
                      +|+++++|.+.+..+-..|++       |+...+++++.+.+.    +.|.... +  |-.+..    +.+.+.+..  +
T Consensus         7 TGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~--g   84 (240)
T d2bd0a1           7 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY--G   84 (240)
T ss_dssp             ETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT--S
T ss_pred             ccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc--C
Confidence            999999999999888888987       888999988776653    3343221 2  333322    223333333  3


Q ss_pred             cccEEEeCCChh-----------hH---------------HHhhcccc--CCCEEEEEeccCC
Q 019790          218 GVDVILDCMGAS-----------YF---------------QRNLGSLN--IDGRLFIIGTQGG  252 (335)
Q Consensus       218 ~~d~vid~~g~~-----------~~---------------~~~~~~l~--~~G~~v~~g~~~~  252 (335)
                      ++|++++++|..           .+               +.+++.|+  .+|+++.++...+
T Consensus        85 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          85 HIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence            699999988731           11               23455553  4689998876553

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.64  E-value=0.14  Score=41.55  Aligned_cols=81  Identities=19%  Similarity=0.205  Sum_probs=52.4

Q ss_pred             CCCCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCCCEEEeCCCccH---H
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDF---V  207 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~---~  207 (335)
                      +-+|.++||          +||++  ++|.+++..+...|++|+++.++++..+.+.    ..+.......+..+.   .
T Consensus         2 ~L~gK~~lI----------TGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (258)
T d1qsga_           2 FLSGKRILV----------TGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASID   71 (258)
T ss_dssp             TTTTCEEEE----------CCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred             cCCCCEEEE----------ECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHH
Confidence            346889999          99888  7889998988899999999999876554443    344433333333222   1


Q ss_pred             HHHHH-HhCCCcccEEEeCCC
Q 019790          208 ARVKE-ETGGKGVDVILDCMG  227 (335)
Q Consensus       208 ~~~~~-~~~~~~~d~vid~~g  227 (335)
                      ....+ .......|+.+++++
T Consensus        72 ~~~~~~~~~~~~~d~~v~~a~   92 (258)
T d1qsga_          72 TMFAELGKVWPKFDGFVHSIG   92 (258)
T ss_dssp             HHHHHHHTTCSSEEEEEECCC
T ss_pred             HHHHHhhhcccccceEEEeec
Confidence            11111 222346899998764

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.026  Score=45.92  Aligned_cols=48  Identities=21%  Similarity=0.256  Sum_probs=41.0

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCC
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD  196 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~  196 (335)
                      +|..+||          +||++++|.+.++.+...|++|+++.+++++.+.+. +++..
T Consensus         4 kGKvalI----------TGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVI----------TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            5788999          999999999999999999999999999888776554 55544

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.45  E-value=0.08  Score=42.68  Aligned_cols=96  Identities=14%  Similarity=0.137  Sum_probs=62.7

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCC-EEEeCCCcc
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD-VCINYKTED  205 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~  205 (335)
                      +.......+..+||-          .| +| .|..+..+++ .|++|++++.+++..+.+++.    +.. ..+..+..+
T Consensus        33 ~~~~~~~~~~~~iLD----------iG-cG-tG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~   99 (251)
T d1wzna1          33 IFKEDAKREVRRVLD----------LA-CG-TGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE   99 (251)
T ss_dssp             HHHHTCSSCCCEEEE----------ET-CT-TCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG
T ss_pred             HHHHhcCCCCCEEEE----------eC-CC-CCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhh
Confidence            334445566778888          76 33 4888887777 589999999999888877642    322 233332221


Q ss_pred             HHHHHHHHhCCCcccEEEeCCCh----------hhHHHhhccccCCCEEEE
Q 019790          206 FVARVKEETGGKGVDVILDCMGA----------SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~  246 (335)
                             ..-.+.||+|+-+.+.          ..+..+.+.|+|+|.++.
T Consensus       100 -------l~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         100 -------IAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             -------CCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -------cccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence                   1223479998865432          124678899999999875

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.32  E-value=0.089  Score=42.03  Aligned_cols=105  Identities=11%  Similarity=0.004  Sum_probs=65.4

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC-CE------------EE
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA-DV------------CI  199 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~-~~------------~~  199 (335)
                      ....+.++.+||.          .|  .+.|..+..+|+ .|++|++++.|++..+.+++... ..            ..
T Consensus        39 ~~l~~~~~~rvLd----------~G--CG~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~  105 (229)
T d2bzga1          39 TFLKGKSGLRVFF----------PL--CGKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVF  105 (229)
T ss_dssp             HHHTTCCSCEEEE----------TT--CTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEE
T ss_pred             HhcCCCCCCEEEE----------eC--CCCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhccccccee
Confidence            3456788899999          76  555888888887 49999999999999888764321 11            00


Q ss_pred             eCCC--cc-HHHHHHH--HhCCCcccEEEeCCCh---------hhHHHhhccccCCCEEEEEecc
Q 019790          200 NYKT--ED-FVARVKE--ETGGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       200 ~~~~--~~-~~~~~~~--~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ....  .. +...+.+  ......||+|+++..-         ..+..+.+.|+|+|+++.....
T Consensus       106 ~~~~~~v~~~~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~  170 (229)
T d2bzga1         106 KSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS  170 (229)
T ss_dssp             EETTSSEEEEESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             eecCCcEEEEEcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence            0000  00 0000111  1223468999986531         1246788999999998766443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.28  E-value=0.042  Score=43.62  Aligned_cols=73  Identities=19%  Similarity=0.113  Sum_probs=47.8

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+|||          +||+|.+|..++..+...|.  .|+...|++++...+.. +...+ ..+..+ .+.+.+...  +
T Consensus         4 ~tVlV----------tGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~-~~d~~~-~~~~~~~~~--~   68 (252)
T d2q46a1           4 PTVLV----------TGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVF-IGDITD-ADSINPAFQ--G   68 (252)
T ss_dssp             CEEEE----------ESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEE-ECCTTS-HHHHHHHHT--T
T ss_pred             CEEEE----------ECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEE-Eeeecc-ccccccccc--c
Confidence            47899          99999999999999988885  56677788766554432 23322 222222 223344443  5


Q ss_pred             ccEEEeCCCh
Q 019790          219 VDVILDCMGA  228 (335)
Q Consensus       219 ~d~vid~~g~  228 (335)
                      +|.|+.+++.
T Consensus        69 ~d~vi~~a~~   78 (252)
T d2q46a1          69 IDALVILTSA   78 (252)
T ss_dssp             CSEEEECCCC
T ss_pred             ceeeEEEEee
Confidence            8999988753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.27  E-value=0.14  Score=41.51  Aligned_cols=31  Identities=32%  Similarity=0.317  Sum_probs=28.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      +|+++++|.+.+..+...|++|+++.++.++
T Consensus         7 TGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           7 TGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            9999999999999999999999999987554

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.22  E-value=0.084  Score=41.61  Aligned_cols=93  Identities=15%  Similarity=0.179  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC-CEEEeCCCccHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVARV  210 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~  210 (335)
                      -+.++.+||-          +|  .+.|..+..+++. |++|++++.+++..+.+++    .+. ...+..+.....   
T Consensus        34 ~l~~~~~ILD----------iG--cG~G~~~~~la~~-~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~---   97 (226)
T d1ve3a1          34 YMKKRGKVLD----------LA--CGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS---   97 (226)
T ss_dssp             SCCSCCEEEE----------ET--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC---
T ss_pred             hcCCCCEEEE----------EC--CCcchhhhhHhhh-hcccccccccccchhhhhhhhcccccccccccccccccc---
Confidence            3578889988          77  4557788888875 8999999999998877764    232 222222222110   


Q ss_pred             HHHhCCCcccEEEeCCC-----hh----hHHHhhccccCCCEEEEE
Q 019790          211 KEETGGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~  247 (335)
                         .....||+|+-.-.     ..    .+..+.+.|+|||+++..
T Consensus        98 ---~~~~~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1          98 ---FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             ---SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccCcCceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence               12247999885332     21    246778899999998754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.16  E-value=0.18  Score=37.37  Aligned_cols=81  Identities=14%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                      .| .|.+|.+.+.-+...|.++++..++.++.+.+. ++|.....     +..+.+      +..|+||-|+....+...
T Consensus         6 IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~-----~~~~~~------~~~dvIilavkp~~~~~v   73 (152)
T d2ahra2           6 IG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM-----SHQDLI------DQVDLVILGIKPQLFETV   73 (152)
T ss_dssp             EC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS-----SHHHHH------HTCSEEEECSCGGGHHHH
T ss_pred             Ee-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec-----hhhhhh------hccceeeeecchHhHHHH
Confidence            66 899999988877777999999999988877764 56754321     222222      148999999988778888


Q ss_pred             hccccCCCEEEEEe
Q 019790          235 LGSLNIDGRLFIIG  248 (335)
Q Consensus       235 ~~~l~~~G~~v~~g  248 (335)
                      +..++++..++++.
T Consensus        74 l~~l~~~~~iis~~   87 (152)
T d2ahra2          74 LKPLHFKQPIISMA   87 (152)
T ss_dssp             HTTSCCCSCEEECC
T ss_pred             hhhcccceeEeccc
Confidence            88888877777653

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.15  E-value=0.13  Score=41.98  Aligned_cols=43  Identities=26%  Similarity=0.302  Sum_probs=34.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHH-Hhh--CCCeEEEEecChhhHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQM-GKC--QGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~-a~~--~g~~V~~~~~~~~~~~~~~  191 (335)
                      .|..+||          +||++++|.++++. |+.  .|++|+++.|++++.+.+.
T Consensus         5 ~gKvalI----------TGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVL----------TGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEE----------SSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHH
T ss_pred             CCCEEEE----------eCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHH
Confidence            4667889          99999999988764 553  5999999999998877654

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.05  E-value=0.1  Score=38.08  Aligned_cols=72  Identities=17%  Similarity=0.265  Sum_probs=45.7

Q ss_pred             ccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHh
Q 019790          156 HGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRN  234 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~  234 (335)
                      .|++|.+|..+++..... +.+++......+......                        ..++|++||++..+.+...
T Consensus         5 ~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~------------------------~~~~DvvIDFS~p~~~~~~   60 (135)
T d1yl7a1           5 LGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT------------------------DGNTEVVIDFTHPDVVMGN   60 (135)
T ss_dssp             ETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH------------------------TTTCSEEEECCCTTTHHHH
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc------------------------cccCCEEEEcccHHHHHHH
Confidence            898999999988876655 678776653322111111                        1357888887777766666


Q ss_pred             hccccCCCEEEEEeccC
Q 019790          235 LGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       235 ~~~l~~~G~~v~~g~~~  251 (335)
                      ++.....|.=+.+|..+
T Consensus        61 ~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1          61 LEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             HHHHHHTTCEEEECCCC
T ss_pred             HHHHHhcCCCEEEeccc
Confidence            66665566556666544

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.00  E-value=0.19  Score=35.15  Aligned_cols=89  Identities=10%  Similarity=0.034  Sum_probs=59.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh--hHHHHHHcCCCEEEe--CCCccHHHHHHHHh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCIN--YKTEDFVARVKEET  214 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~--~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~  214 (335)
                      .|.+|||          .| .|.+|..-++.+...|++|+++.....  ....+ +.+.-....  +...++        
T Consensus        11 ~~k~vlV----------vG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~-~~~~i~~~~~~~~~~dl--------   70 (113)
T d1pjqa1          11 RDRDCLI----------VG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWA-NEGMLTLVEGPFDETLL--------   70 (113)
T ss_dssp             BTCEEEE----------EC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH-TTTSCEEEESSCCGGGG--------
T ss_pred             CCCEEEE----------EC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH-hcCCceeeccCCCHHHh--------
Confidence            4678888          88 699999999999999999998875332  22323 222222222  111211        


Q ss_pred             CCCcccEEEeCCChhhH-HHhhccccCCCEEEEEec
Q 019790          215 GGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       215 ~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g~  249 (335)
                        .++++++.+.+...+ .......++.|.++-+..
T Consensus        71 --~~~~lv~~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          71 --DSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             --TTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             --CCCcEEeecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence              368999999988765 456677788888877643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=93.97  E-value=0.12  Score=42.14  Aligned_cols=82  Identities=24%  Similarity=0.349  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEeecccccccccccc--chHHHHHHHHHhhCCCeEEEEecChhhH-HHHH-HcCCCE---EEeCCCc----
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCK-DLGADV---CINYKTE----  204 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~--g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~~-~~g~~~---~~~~~~~----  204 (335)
                      ++-+|.++||          .|++  .++|.++++-+...|++|+.+.++.++. +.+. .++...   ..|-.+.    
T Consensus         2 ~~l~gK~~lI----------tGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~   71 (268)
T d2h7ma1           2 GLLDGKRILV----------SGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLA   71 (268)
T ss_dssp             CTTTTCEEEE----------CCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHH
T ss_pred             CCCCCCEEEE----------ECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccc
Confidence            3457889999          9954  4699999988888899999999887765 3333 344322   2233332    


Q ss_pred             cHHHHHHHHh-CCCcccEEEeCCC
Q 019790          205 DFVARVKEET-GGKGVDVILDCMG  227 (335)
Q Consensus       205 ~~~~~~~~~~-~~~~~d~vid~~g  227 (335)
                      ...+.+.+.. .....|+++.++|
T Consensus        72 ~~~~~v~~~~~~~~~ld~~i~~ag   95 (268)
T d2h7ma1          72 SLAGRVTEAIGAGNKLDGVVHSIG   95 (268)
T ss_dssp             HHHHHHHHHHCTTCCEEEEEECCC
T ss_pred             cccchhhhccccCCCcceeeeccc
Confidence            1223333333 2346899999887

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.92  E-value=0.11  Score=44.13  Aligned_cols=102  Identities=18%  Similarity=0.206  Sum_probs=60.5

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCCCEEEeCCCccHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARV  210 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~  210 (335)
                      .+++|++||=          .+  +..|..++.+|+. |+ +|+.++.+++..+.+++    .|....+.....+..+.+
T Consensus       142 ~~~~g~~VLD----------l~--~g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~  208 (324)
T d2as0a2         142 WVQPGDRVLD----------VF--TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEM  208 (324)
T ss_dssp             GCCTTCEEEE----------TT--CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred             hcCCCCeeec----------cc--Ccccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhh
Confidence            4578999988          54  3344445555555 65 89999999998887753    343210111123333333


Q ss_pred             HHH-hCCCcccEEEeCCCh----------------hhHHHhhccccCCCEEEEEecc
Q 019790          211 KEE-TGGKGVDVILDCMGA----------------SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       211 ~~~-~~~~~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ... ..+..||+|+--.+.                ..+..+++.|+++|.++.+...
T Consensus       209 ~~~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         209 EKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             HHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             HHHHhccCCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            222 234579999852221                1235678899999999887543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=93.87  E-value=0.06  Score=43.22  Aligned_cols=101  Identities=13%  Similarity=0.138  Sum_probs=66.6

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFV  207 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~  207 (335)
                      ..+.....+||-          +|  +.+|..++.+|+.+  +.+|+.++.+++..+.+++    .|....+.....+..
T Consensus        54 L~~~~~~k~iLE----------iG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~  121 (227)
T d1susa1          54 LLKLINAKNTME----------IG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL  121 (227)
T ss_dssp             HHHHHTCCEEEE----------EC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred             HHHhcCCCcEEE----------ec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHH
Confidence            334455678888          87  67899999999887  4699999999887766653    454322222333444


Q ss_pred             HHHHHHh----CCCcccEEEe-CCCh---hhHHHhhccccCCCEEEE
Q 019790          208 ARVKEET----GGKGVDVILD-CMGA---SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       208 ~~~~~~~----~~~~~d~vid-~~g~---~~~~~~~~~l~~~G~~v~  246 (335)
                      +.+.+..    ..+.||.||- +--.   ..+..+++.|+++|-++.
T Consensus       122 ~~L~~l~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~  168 (227)
T d1susa1         122 PVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGY  168 (227)
T ss_dssp             HHHHHHHHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEE
T ss_pred             HHHHHHHhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEE
Confidence            4444432    2347999985 3333   236788999999998775

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.75  E-value=0.055  Score=46.09  Aligned_cols=47  Identities=28%  Similarity=0.268  Sum_probs=40.3

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      .-+++|.+|||          +||+|-+|..++..+...|++|++++|+.++...+.
T Consensus         6 ~~~~~gk~VlV----------TG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLV----------TGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEE----------ECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence            45678999999          999999999999888888999999999877665543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.74  E-value=0.053  Score=41.66  Aligned_cols=36  Identities=22%  Similarity=0.207  Sum_probs=32.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      +||+|.+|.+.++.+...|++|++..|++++.+.+.
T Consensus         6 igGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           6 LGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred             EeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            878999999999999999999999999998876664

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.62  Score=39.14  Aligned_cols=99  Identities=14%  Similarity=0.282  Sum_probs=65.1

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHHc-----------C--C-
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL-----------G--A-  195 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~~-----------g--~-  195 (335)
                      +....++++++++|-          .|  ++.|..+.++|+..++ ++++++.+++..+.++..           |  . 
T Consensus       143 ~~~~~~l~~~~~vlD----------~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~  210 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVD----------LG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHA  210 (328)
T ss_dssp             HHHHSCCCTTCEEEE----------ET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHcCCCCCCEEEE----------cC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCC
Confidence            447788999998887          77  6789999999999887 799999998877665421           1  1 


Q ss_pred             C-EEEeCCC--ccHHHHHHHHhCCCcccEEEeCC---Ch---hhHHHhhccccCCCEEEEE
Q 019790          196 D-VCINYKT--EDFVARVKEETGGKGVDVILDCM---GA---SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       196 ~-~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~---g~---~~~~~~~~~l~~~G~~v~~  247 (335)
                      . ..+..+.  ..+.+.+.      .+|+|+-..   +.   ..+.+.++.|++||+++..
T Consensus       211 ~i~~~~gd~~~~~~~~~~~------~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~  265 (328)
T d1nw3a_         211 EYTLERGDFLSEEWRERIA------NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS  265 (328)
T ss_dssp             CEEEEECCTTSHHHHHHHH------HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred             ceEEEECcccccccccccC------cceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEe
Confidence            1 1222222  22222221      357877422   12   2346778899999999875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=93.59  E-value=0.022  Score=38.84  Aligned_cols=36  Identities=17%  Similarity=0.172  Sum_probs=30.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  185 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~  185 (335)
                      .|.+|+|          +| .|..|+++++++...|++|++.+.+..
T Consensus         4 ~~K~v~V----------iG-lG~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVI----------IG-LGLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEE----------EC-CSHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCCEEEE----------Ee-ECHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            3567888          87 799999999999999999999997443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=93.30  E-value=0.49  Score=34.71  Aligned_cols=74  Identities=14%  Similarity=0.103  Sum_probs=51.0

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHH-HHHHHHhCC-CcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFV-ARVKEETGG-KGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~-~~~d~vid~~g~~  229 (335)
                      +||.|.+|...+..++..|++|.+.+++..........+++.++........ ..+.+.... ..=.+++|+.+..
T Consensus        15 IGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~Svk   90 (152)
T d2pv7a2          15 VGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSVK   90 (152)
T ss_dssp             ETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSCC
T ss_pred             EcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEecccC
Confidence            8889999999999999999999999998777666666677777665553322 222222211 1124788887753

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.16  E-value=0.17  Score=41.94  Aligned_cols=72  Identities=21%  Similarity=0.232  Sum_probs=43.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEE---ecChhhHH----HHHHc---CCCE---EEeCCCccHHHHHHHHhCCCcccEE
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVT---AGSEEKLA----VCKDL---GADV---CINYKTEDFVARVKEETGGKGVDVI  222 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~---~~~~~~~~----~~~~~---g~~~---~~~~~~~~~~~~~~~~~~~~~~d~v  222 (335)
                      +|+++++|.+++..+-..|++|+.+   .++.+..+    .++++   +...   ..|-.+..-.+.+.+....+..|++
T Consensus         8 TGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~idil   87 (285)
T d1jtva_           8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVL   87 (285)
T ss_dssp             SCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCSEE
T ss_pred             ccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccchhhh
Confidence            8999999999999988889875444   44433322    22332   2222   2244443333344444444579999


Q ss_pred             EeCCC
Q 019790          223 LDCMG  227 (335)
Q Consensus       223 id~~g  227 (335)
                      +++.|
T Consensus        88 vnnag   92 (285)
T d1jtva_          88 VCNAG   92 (285)
T ss_dssp             EECCC
T ss_pred             hhccc
Confidence            99886

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.13  E-value=0.14  Score=42.81  Aligned_cols=75  Identities=17%  Similarity=0.199  Sum_probs=46.3

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec--Chh---hHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG--SEE---KLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~--~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      +|||          +||+|-+|..++..+...|.+|+++++  ...   +...+...+.-..+..+-.+ .+.+.+...+
T Consensus         2 KILV----------TGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~-~~~l~~~~~~   70 (338)
T d1orra_           2 KLLI----------TGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-KNDVTRLITK   70 (338)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHH
T ss_pred             EEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCC-HHHHHHHHHh
Confidence            6899          999999999999999888999999863  112   22333333322333222221 1223333323


Q ss_pred             CcccEEEeCCC
Q 019790          217 KGVDVILDCMG  227 (335)
Q Consensus       217 ~~~d~vid~~g  227 (335)
                      ..+|+||.+++
T Consensus        71 ~~~d~Vih~aa   81 (338)
T d1orra_          71 YMPDSCFHLAG   81 (338)
T ss_dssp             HCCSEEEECCC
T ss_pred             cCCceEEeecc
Confidence            36899999875

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.06  E-value=0.21  Score=38.31  Aligned_cols=36  Identities=14%  Similarity=0.120  Sum_probs=31.5

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ....+|+|          .| +|+.|+.++..+..+|.+|++..+.+
T Consensus        41 ~~~k~V~I----------IG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAV----------VG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEE----------EC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            45678988          88 69999999999999999999999754

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.93  E-value=0.073  Score=42.43  Aligned_cols=102  Identities=18%  Similarity=0.159  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~  206 (335)
                      ...+.....+||-          +|  ...|..++.+|+.+  +.+|+.++.+++..+.+++    .|....+.....+.
T Consensus        53 ~L~~~~~~k~vLE----------iG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda  120 (219)
T d2avda1          53 NLARLIQAKKALD----------LG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPA  120 (219)
T ss_dssp             HHHHHTTCCEEEE----------EC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred             HHHHccCCCeEEE----------Ee--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeeh
Confidence            3444455678888          87  67889999999987  5699999998887766653    34322222223333


Q ss_pred             HHHHHHH---hCCCcccEEEeCCCh----hhHHHhhccccCCCEEEE
Q 019790          207 VARVKEE---TGGKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       207 ~~~~~~~---~~~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~  246 (335)
                      .+.+.+.   .....||+||--...    ..+..+++.|++||-++.
T Consensus       121 ~e~l~~~~~~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         121 LETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             HHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhcchhhhhhcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEE
Confidence            3333332   233479999864443    236788999999998865

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=92.91  E-value=0.34  Score=36.44  Aligned_cols=96  Identities=15%  Similarity=0.071  Sum_probs=67.0

Q ss_pred             cCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEE
Q 019790          119 AFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC  198 (335)
Q Consensus       119 ~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~  198 (335)
                      .+|+.....+..|....---.|.+++|          .|.+..+|.-+..++...|++|++.....              
T Consensus        16 ~~PcTp~aI~~lL~~y~i~l~GK~v~V----------IGrS~~VG~Pla~lL~~~gatVt~~h~~t--------------   71 (166)
T d1b0aa1          16 LRPCTPRGIVTLLERYNIDTFGLNAVV----------IGASNIVGRPMSMELLLAGCTTTVTHRFT--------------   71 (166)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEE----------ECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------
T ss_pred             CCCchHHHHHHHHHHcCcccccceEEE----------EeccccccHHHHHHHHHhhcccccccccc--------------
Confidence            455555555656644444457899999          99999999999999999999988765321              


Q ss_pred             EeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          199 INYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                           .+..+.+      +..|+++-++|...+-. -+.++++..++.+|..
T Consensus        72 -----~~l~~~~------~~ADivI~a~G~p~~i~-~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          72 -----KNLRHHV------ENADLLIVAVGKPGFIP-GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             -----SCHHHHH------HHCSEEEECSCCTTCBC-TTTSCTTCEEEECCCE
T ss_pred             -----chhHHHH------hhhhHhhhhccCccccc-ccccCCCcEEEecCce
Confidence                 2222222      24799999999765321 3567888888888764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.88  E-value=0.046  Score=40.75  Aligned_cols=79  Identities=10%  Similarity=0.098  Sum_probs=50.8

Q ss_pred             ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhcc
Q 019790          158 GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGS  237 (335)
Q Consensus       158 ~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~  237 (335)
                      |+|.+|.+.+..++..+..+.+..|+.++.+.+.+.+.....+..+ .          -+..|+||-|+....+......
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~-~----------~~~~DiVil~v~d~~i~~v~~~   74 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEK-H----------PELNGVVFVIVPDRYIKTVANH   74 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCC-C----------CC---CEEECSCTTTHHHHHTT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhh-h----------hccCcEEEEeccchhhhHHHhh
Confidence            4899999988877653333467899999988888765543322111 1          1347999999998888888888


Q ss_pred             ccCCCEE-EEE
Q 019790          238 LNIDGRL-FII  247 (335)
Q Consensus       238 l~~~G~~-v~~  247 (335)
                      ++..+++ +.+
T Consensus        75 l~~~~~ivi~~   85 (153)
T d2i76a2          75 LNLGDAVLVHC   85 (153)
T ss_dssp             TCCSSCCEEEC
T ss_pred             hcccceeeeec
Confidence            8755554 444

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.83  E-value=0.055  Score=45.07  Aligned_cols=96  Identities=17%  Similarity=0.170  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHc----CCC-----EEEeCCCccH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GAD-----VCINYKTEDF  206 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~----g~~-----~~~~~~~~~~  206 (335)
                      +.+++.+||-          .|  .+.|..+..+++. |++|++++.+++.++.+++.    +..     ..+..  .++
T Consensus        53 ~~~~~~~vLD----------~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~--~~~  117 (292)
T d1xvaa_          53 RQHGCHRVLD----------VA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEE--ANW  117 (292)
T ss_dssp             HHTTCCEEEE----------SS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEE--CCG
T ss_pred             hhcCCCEEEE----------ec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeee--ccc
Confidence            3356778888          76  5678888888876 99999999999988777532    211     11111  111


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh---------------hhHHHhhccccCCCEEEE
Q 019790          207 VARVKEETGGKGVDVILDCMGA---------------SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~  246 (335)
                      ...-........||.|+.....               ..+..+.+.|+|+|.++.
T Consensus       118 ~~~~~~~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         118 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             GGHHHHSCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             cccccccCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            1111222233579988853211               135778999999999875

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.81  E-value=0.14  Score=40.99  Aligned_cols=100  Identities=21%  Similarity=0.139  Sum_probs=65.4

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC--CeEEEEecChhhHHHHHHc----CCCEEEeCCCccH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKDL----GADVCINYKTEDF  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g--~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~  206 (335)
                      ....++||++||=          .|  .+.|..+..+++..|  .+|++++.+++..+.+++.    +....+..+....
T Consensus        67 ~~l~i~pG~~VLD----------lG--aGsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~  134 (227)
T d1g8aa_          67 KNFPIKPGKSVLY----------LG--IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKP  134 (227)
T ss_dssp             CCCCCCTTCEEEE----------ET--TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCG
T ss_pred             cccccCCCCEEEE----------ec--cCCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCc
Confidence            4457899999999          77  556888999999886  4899999999988777642    2222222222211


Q ss_pred             HHHHHHHhCCCcccEEEeCCCh-----hhHHHhhccccCCCEEEEE
Q 019790          207 VARVKEETGGKGVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  247 (335)
                       ..... . ...+|+++..+..     ..+..+.+.|+++|+++..
T Consensus       135 -~~~~~-~-~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         135 -EEYRA-L-VPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -GGGTT-T-CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccc-c-ccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             11111 1 1357888764432     1256778899999998765

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.74  E-value=0.028  Score=43.96  Aligned_cols=97  Identities=11%  Similarity=0.207  Sum_probs=61.5

Q ss_pred             HHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cC--CC--EEEeCC
Q 019790          131 VFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LG--AD--VCINYK  202 (335)
Q Consensus       131 l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g--~~--~~~~~~  202 (335)
                      |.......++++||-          .|  ++.|..++.+++ .+.+|++++.++...+.+++    .+  ..  .++..+
T Consensus        44 Li~~l~~~~~~~VLD----------iG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d  110 (194)
T d1dusa_          44 LVENVVVDKDDDILD----------LG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD  110 (194)
T ss_dssp             HHHHCCCCTTCEEEE----------ET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS
T ss_pred             HHHhCCcCCCCeEEE----------Ee--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcc
Confidence            335567788999888          66  445666667776 46799999999888877753    22  21  222222


Q ss_pred             CccHHHHHHHHhCCCcccEEEeCC----Chh----hHHHhhccccCCCEEEEE
Q 019790          203 TEDFVARVKEETGGKGVDVILDCM----GAS----YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       203 ~~~~~~~~~~~~~~~~~d~vid~~----g~~----~~~~~~~~l~~~G~~v~~  247 (335)
                      ..       +....+.||+|+-..    +.+    .+..+.+.|+++|+++..
T Consensus       111 ~~-------~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         111 LY-------ENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TT-------TTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hh-------hhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            11       112235799998632    322    246678889999998654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.72  E-value=0.33  Score=36.16  Aligned_cols=82  Identities=17%  Similarity=0.113  Sum_probs=56.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHH-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQR-  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~-  233 (335)
                      +| .|.+|...+.-+...|.+|++.++++++.+.+.+.+... .+    ...+.++      ..|++|-|+.+.. ... 
T Consensus         6 IG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~-~~----~~~e~~~------~~d~ii~~v~~~~~v~~v   73 (161)
T d1vpda2           6 IG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET-AS----TAKAIAE------QCDVIITMLPNSPHVKEV   73 (161)
T ss_dssp             EC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CS----SHHHHHH------HCSEEEECCSSHHHHHHH
T ss_pred             Ee-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh-cc----cHHHHHh------CCCeEEEEcCCHHHHHHH
Confidence            66 899999999888888999999999999999998887643 21    1222221      4799999997543 333 


Q ss_pred             ------hhccccCCCEEEEEec
Q 019790          234 ------NLGSLNIDGRLFIIGT  249 (335)
Q Consensus       234 ------~~~~l~~~G~~v~~g~  249 (335)
                            ....++++--++.++.
T Consensus        74 ~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          74 ALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHSTTCHHHHCCTTCEEEECSC
T ss_pred             HhCCcchhhccCCCCEEEECCC
Confidence                  2334555555565543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.51  E-value=0.07  Score=37.92  Aligned_cols=67  Identities=12%  Similarity=0.191  Sum_probs=45.4

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhC
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG  215 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  215 (335)
                      .++...+++|          .| .|.+|+-+++.+..+|.+|+++.+.+.-            +...+....+.+++...
T Consensus        18 ~l~~p~~v~I----------iG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~i------------l~~~d~~~~~~~~~~l~   74 (117)
T d1onfa2          18 NIKESKKIGI----------VG-SGYIAVELINVIKRLGIDSYIFARGNRI------------LRKFDESVINVLENDMK   74 (117)
T ss_dssp             TCCCCSEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECSSSSS------------CTTSCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEE----------EC-CchHHHHHHHHHHhccccceeeehhccc------------cccccHHHHHHHHHHHH
Confidence            4455678888          88 6999999999999999999999976421            22223344455555444


Q ss_pred             CCcccEEEeC
Q 019790          216 GKGVDVILDC  225 (335)
Q Consensus       216 ~~~~d~vid~  225 (335)
                      ..++++..++
T Consensus        75 ~~gV~i~~~~   84 (117)
T d1onfa2          75 KNNINIVTFA   84 (117)
T ss_dssp             HTTCEEECSC
T ss_pred             hCCCEEEECC
Confidence            4566666543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.26  E-value=0.087  Score=38.12  Aligned_cols=69  Identities=13%  Similarity=0.144  Sum_probs=49.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNL  235 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~  235 (335)
                      +|++|.+|.+..+++...|.+++.......          ...+                 ..+|+++|.+..+.+...+
T Consensus         6 ~G~~GrMG~~i~~~~~~~~~~l~~~id~~~----------~~~~-----------------~~~DVvIDFS~p~~~~~~l   58 (128)
T d1vm6a3           6 VGYSGRMGQEIQKVFSEKGHELVLKVDVNG----------VEEL-----------------DSPDVVIDFSSPEALPKTV   58 (128)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEEETTE----------EEEC-----------------SCCSEEEECSCGGGHHHHH
T ss_pred             ECCCCHHHHHHHHHHhcCCCeEEEEECCCc----------HHHh-----------------ccCCEEEEecCHHHHHHHH
Confidence            898999999999999999988776542110          0000                 2579999999988877777


Q ss_pred             ccccCCCEEEEEeccC
Q 019790          236 GSLNIDGRLFIIGTQG  251 (335)
Q Consensus       236 ~~l~~~G~~v~~g~~~  251 (335)
                      +.....+.=+.+|..+
T Consensus        59 ~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          59 DLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             HHHHHHTCEEEECCCS
T ss_pred             HHHHhcCCCEEEEcCC
Confidence            6666666666777654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=92.07  E-value=0.38  Score=39.21  Aligned_cols=33  Identities=12%  Similarity=0.136  Sum_probs=27.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecC-hhhHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLA  188 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~-~~~~~  188 (335)
                      +||++++|.++++.+...|++|+++.++ ++..+
T Consensus         8 TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           8 TGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN   41 (284)
T ss_dssp             TTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred             eCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence            9999999999999999999999988764 44333

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=91.87  E-value=0.12  Score=43.85  Aligned_cols=77  Identities=12%  Similarity=0.134  Sum_probs=49.6

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH-HHc----CCCEEE-eCCCccHHHHHHH
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL----GADVCI-NYKTEDFVARVKE  212 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~-~~~----g~~~~~-~~~~~~~~~~~~~  212 (335)
                      .+.+|||          +||+|-+|..+++.+...|++|++++++......+ +..    +...+. |-.+.   +.+.+
T Consensus         7 ~~KkILV----------TG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~l~~   73 (356)
T d1rkxa_           7 QGKRVFV----------TGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ---NKLLE   73 (356)
T ss_dssp             TTCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH---HHHHH
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccCh---Hhhhh
Confidence            4689999          99999999999999999999999999865432221 111    222221 22222   22333


Q ss_pred             HhCCCcccEEEeCCCh
Q 019790          213 ETGGKGVDVILDCMGA  228 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~  228 (335)
                      ......+|+++.+++.
T Consensus        74 ~~~~~~~~~v~~~aa~   89 (356)
T d1rkxa_          74 SIREFQPEIVFHMAAQ   89 (356)
T ss_dssp             HHHHHCCSEEEECCSC
T ss_pred             hhhhchhhhhhhhhcc
Confidence            3323367899987763

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=91.62  E-value=0.15  Score=41.74  Aligned_cols=94  Identities=11%  Similarity=0.106  Sum_probs=64.9

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHcCCCE-EEeCCCccHHHHHHHHhC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETG  215 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~  215 (335)
                      .++.+||-          .|  .+.|..+..+++.. +.+++.++.++...+.+++...+. ....+....      -..
T Consensus        83 ~~~~~iLD----------iG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l------~~~  144 (268)
T d1p91a_          83 DKATAVLD----------IG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL------PFS  144 (268)
T ss_dssp             TTCCEEEE----------ET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC------SBC
T ss_pred             CCCCEEEE----------eC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhc------cCC
Confidence            45667776          66  55677777888776 679999999999988887644322 222221111      012


Q ss_pred             CCcccEEEeCCChhhHHHhhccccCCCEEEEEec
Q 019790          216 GKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       216 ~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      ...||+|+.......+.++.+.|+|+|.++....
T Consensus       145 ~~sfD~v~~~~~~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         145 DTSMDAIIRIYAPCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             TTCEEEEEEESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCEEEEeecCCHHHHHHHHHHhCCCcEEEEEee
Confidence            3469999976666667889999999999987753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.61  E-value=0.094  Score=42.79  Aligned_cols=33  Identities=21%  Similarity=0.257  Sum_probs=30.2

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      +|||          +||+|-+|..++..++..|.+|+++++++
T Consensus         3 KIlI----------tGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILI----------TGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEE----------ESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEE----------ECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            6899          99999999999999999999999998753

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.33  E-value=1.2  Score=32.62  Aligned_cols=95  Identities=13%  Similarity=0.170  Sum_probs=59.9

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChh---hHHHHHHcCCCEEEeCCCccHHHHHHHHh-
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEE---KLAVCKDLGADVCINYKTEDFVARVKEET-  214 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-  214 (335)
                      .+|.|          .|++|.+|..+.++.+..  .++|+++..+..   -.+.++++....+.-.+.... +.+.+.. 
T Consensus         3 K~I~I----------lGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~-~~l~~~~~   71 (150)
T d1r0ka2           3 RTVTV----------LGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLY-NDLKEALA   71 (150)
T ss_dssp             EEEEE----------ETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGH-HHHHHHTT
T ss_pred             cEEEE----------ECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHH-HHHHHHhh
Confidence            57888          999999999999999987  468888765433   234456788877654433221 2222221 


Q ss_pred             ----------------CCCcccEEEeCCCh-hhHHHhhccccCCCEEEE
Q 019790          215 ----------------GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       215 ----------------~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~  246 (335)
                                      ....+|+++.++.+ .-+...+..++.+-++.+
T Consensus        72 ~~~~~v~~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          72 GSSVEAAAGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             TCSSEEEESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             hcccccccCccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                            12246777777654 446666666666655443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.28  E-value=0.16  Score=42.60  Aligned_cols=33  Identities=15%  Similarity=0.137  Sum_probs=30.1

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      .++||          +||+|-+|..++..+...|++|+++++.
T Consensus         2 k~~LV----------TGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALI----------TGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEE----------eCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            46899          9999999999999999999999999974

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.28  E-value=0.2  Score=43.24  Aligned_cols=32  Identities=19%  Similarity=0.178  Sum_probs=29.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEe
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTA  181 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~  181 (335)
                      |.+|||          +||+|-+|..++..+...|.+|++++
T Consensus         1 g~kILV----------TGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMV----------IGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            678999          99999999999999999999999986

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.27  E-value=0.23  Score=41.82  Aligned_cols=97  Identities=19%  Similarity=0.164  Sum_probs=57.9

Q ss_pred             CCCCEEEEeecccccccccc-ccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC--EEEeCCCccHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHG-GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD--VCINYKTEDFVARV  210 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g-~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~  210 (335)
                      .+|++||=          .+ ++|..   ++++|+ .+.+|+.++.++...+.+++    .|.+  ..+..+..++.+.+
T Consensus       144 ~~g~rVLD----------l~~gtG~~---s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~  209 (318)
T d1wxxa2         144 FRGERALD----------VFSYAGGF---ALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRL  209 (318)
T ss_dssp             CCEEEEEE----------ETCTTTHH---HHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHH
T ss_pred             hCCCeeec----------cCCCCcHH---HHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhh
Confidence            46888876          43 34444   445554 35699999999998887763    4443  22333323333333


Q ss_pred             HHHhCCCcccEEEeCC---C--hh-----------hHHHhhccccCCCEEEEEecc
Q 019790          211 KEETGGKGVDVILDCM---G--AS-----------YFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~---g--~~-----------~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      ..  .+..||+|+--.   +  ..           .+..+++.|+|||.++.+...
T Consensus       210 ~~--~~~~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         210 EK--EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             HH--TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             Hh--hhcCCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            22  345799998421   1  11           134678889999999887543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.25  E-value=0.082  Score=41.08  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=52.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC------EEEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD------VCINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      +| +|.+|.+.+.++-..|.+|.+..++++..+.+++.+.+      ..+. .+-.+...+.+...  ..|+++-++++.
T Consensus        13 iG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~-~~i~~t~~l~~a~~--~ad~iiiavPs~   88 (189)
T d1n1ea2          13 FG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLA-SNITFTSDVEKAYN--GAEIILFVIPTQ   88 (189)
T ss_dssp             EC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCC-TTEEEESCHHHHHT--TCSCEEECSCHH
T ss_pred             EC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccc-cccccchhhhhccC--CCCEEEEcCcHH
Confidence            88 79999999999988888999999999988887653311      1111 11111112233332  479999999998


Q ss_pred             hHHHhhcccc
Q 019790          230 YFQRNLGSLN  239 (335)
Q Consensus       230 ~~~~~~~~l~  239 (335)
                      .+...++.++
T Consensus        89 ~~~~~~~~~~   98 (189)
T d1n1ea2          89 FLRGFFEKSG   98 (189)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHH
Confidence            7666555443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.08  E-value=1  Score=33.16  Aligned_cols=91  Identities=10%  Similarity=0.219  Sum_probs=57.7

Q ss_pred             ccccchHHHHHHHHHhhC--CCeEEEEecChh--h-HHHHHHcCCCEEEeCCCccH-------------------HHHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEE--K-LAVCKDLGADVCINYKTEDF-------------------VARVK  211 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~--~-~~~~~~~g~~~~~~~~~~~~-------------------~~~~~  211 (335)
                      .|++|.+|..+..+.+..  .++|++.+.+..  . .+.+.++....+.-.+....                   .+.+.
T Consensus         7 lGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~~~l~   86 (151)
T d1q0qa2           7 LGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAAC   86 (151)
T ss_dssp             ETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESHHHHH
T ss_pred             EcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccChHHHH
Confidence            999999999999999988  468887764332  2 24455788777654433221                   12233


Q ss_pred             HHhCCCcccEEEeCCChh-hHHHhhccccCCCEEEE
Q 019790          212 EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~  246 (335)
                      +......+|+++.++.+. -+...+..++.+-++.+
T Consensus        87 ~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          87 DMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             HHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             HHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence            333444678888877663 46666777766655443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.91  E-value=0.69  Score=34.91  Aligned_cols=94  Identities=17%  Similarity=0.142  Sum_probs=56.8

Q ss_pred             ccccchHHHHHHHHHhhC-CCeEEEEec--ChhhHHHHHHcCCCEEEeCCCccHHHHHHHHh---C------CCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQ-GVRVFVTAG--SEEKLAVCKDLGADVCINYKTEDFVARVKEET---G------GKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~-g~~V~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~------~~~~d~vi  223 (335)
                      .| .|.+|......+... ..+++.+..  +......+...+.+.... ..... ....+..   .      ..++|+|+
T Consensus         8 NG-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~vDvVi   84 (172)
T d2czca2           8 NG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAA-SEEFI-PRFEKEGFEVAGTLNDLLEKVDIIV   84 (172)
T ss_dssp             EC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEES-SGGGH-HHHHHHTCCCSCBHHHHHTTCSEEE
T ss_pred             EC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecc-cccce-eeecccCccccchhhhhhccCCEEE
Confidence            66 899999888877665 458887764  233444555666554331 11111 1111100   0      02699999


Q ss_pred             eCCChhh-HHHhhccccCCCEEEEEeccCC
Q 019790          224 DCMGASY-FQRNLGSLNIDGRLFIIGTQGG  252 (335)
Q Consensus       224 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~  252 (335)
                      ||+|.-. .+.+-..+..+-+.+.++.+..
T Consensus        85 EcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          85 DATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             ECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             ECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            9999854 4556677788888888876543

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.82  E-value=0.49  Score=38.39  Aligned_cols=94  Identities=15%  Similarity=0.167  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCC-C--EEEeCCCccHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA-D--VCINYKTEDFVA  208 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~-~--~~~~~~~~~~~~  208 (335)
                      .+++|++||-          .+  .++|.+++.+|+.-+++|++++.++...+.+++    .+. +  .++..+...   
T Consensus       104 ~~~~g~~VlD----------~~--aG~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~---  168 (260)
T d2frna1         104 VAKPDELVVD----------MF--AGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD---  168 (260)
T ss_dssp             HCCTTCEEEE----------TT--CTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT---
T ss_pred             hcCCccEEEE----------Cc--ceEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHH---
Confidence            4578999988          55  445666666777645699999999998877753    232 1  334433322   


Q ss_pred             HHHHHhCCCcccEEEe-CC-Ch-hhHHHhhccccCCCEEEEEe
Q 019790          209 RVKEETGGKGVDVILD-CM-GA-SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid-~~-g~-~~~~~~~~~l~~~G~~v~~g  248 (335)
                          ......+|.|+- -. .+ ..+..++..++++|.+....
T Consensus       169 ----~~~~~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         169 ----FPGENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             ----CCCCSCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ----hccCCCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence                223356886653 22 22 34677889999999875543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=90.79  E-value=0.046  Score=41.13  Aligned_cols=86  Identities=13%  Similarity=0.060  Sum_probs=52.6

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC--CEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQR  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~  233 (335)
                      +| +|.+|.+....+...|.+|..++|++++.+.....+.  ............+.+      ..+|++|-|+....+..
T Consensus         6 iG-aG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~D~iii~vka~~~~~   78 (167)
T d1ks9a2           6 LG-CGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL------ATSDLLLVTLKAWQVSD   78 (167)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH------HTCSEEEECSCGGGHHH
T ss_pred             EC-cCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhh------cccceEEEeecccchHH
Confidence            87 6999999999888899999999988764433322221  111100011111221      26899999998865443


Q ss_pred             ----hhccccCCCEEEEEe
Q 019790          234 ----NLGSLNIDGRLFIIG  248 (335)
Q Consensus       234 ----~~~~l~~~G~~v~~g  248 (335)
                          ....+.++..++.+.
T Consensus        79 ~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          79 AVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             HHHHHHTTSCTTSCEEEEC
T ss_pred             HHHhhccccCcccEEeecc
Confidence                344555566666663

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=90.76  E-value=0.24  Score=38.70  Aligned_cols=79  Identities=22%  Similarity=0.295  Sum_probs=57.3

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -.|.+|+|          .| .|.+|..+++++...|++|++.+.+.++......++...+ ..  .+       .. ..
T Consensus        25 L~gk~v~I----------qG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~~--~~-------~~-~~   82 (201)
T d1c1da1          25 LDGLTVLV----------QG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-AL--ED-------VL-ST   82 (201)
T ss_dssp             STTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CG--GG-------GG-GC
T ss_pred             CCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-Cc--cc-------cc-cc
Confidence            36789999          87 8999999999999999999999999888888888877543 11  11       11 13


Q ss_pred             cccEEEeCCChhh-HHHhhccc
Q 019790          218 GVDVILDCMGASY-FQRNLGSL  238 (335)
Q Consensus       218 ~~d~vid~~g~~~-~~~~~~~l  238 (335)
                      +.|+++=|..... .....+.+
T Consensus        83 ~~DI~iPcA~~~~I~~~~a~~i  104 (201)
T d1c1da1          83 PCDVFAPCAMGGVITTEVARTL  104 (201)
T ss_dssp             CCSEEEECSCSCCBCHHHHHHC
T ss_pred             cceeeecccccccccHHHHhhh
Confidence            6899987765433 23344444

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=90.58  E-value=0.48  Score=36.71  Aligned_cols=86  Identities=15%  Similarity=0.073  Sum_probs=57.8

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.+|.|          +| .|.+|..++++++..|++|++.++........  .+.      ...++.+.+.      .
T Consensus        42 ~gk~vgI----------iG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~--~~~------~~~~l~~~l~------~   96 (197)
T d1j4aa1          42 RDQVVGV----------VG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK--KGY------YVDSLDDLYK------Q   96 (197)
T ss_dssp             GGSEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH--TTC------BCSCHHHHHH------H
T ss_pred             cCCeEEE----------ec-ccccchhHHHhHhhhcccccccCccccccccc--cee------eecccccccc------c
Confidence            4678888          87 89999999999999999999998664433221  221      1122222222      3


Q ss_pred             ccEEEeCCChhh------HHHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY------FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~------~~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+++-++....      -...+..|+++..+|-++.
T Consensus        97 sDii~~~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  133 (197)
T d1j4aa1          97 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSR  133 (197)
T ss_dssp             CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred             cccccccCCccccccccccHHHHhhhCCccEEEecCc
Confidence            799998876321      1556788888887777653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=90.41  E-value=0.71  Score=37.57  Aligned_cols=75  Identities=24%  Similarity=0.376  Sum_probs=47.9

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChh-----hHHH---HHHcCCCEEEeCCCccHHHHHH
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-----KLAV---CKDLGADVCINYKTEDFVARVK  211 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~-----~~~~---~~~~g~~~~~~~~~~~~~~~~~  211 (335)
                      -.+|||          +||+|-+|..++..+...|.+|++++|+..     +.+.   ....+...+ ..+-.+ .+.+.
T Consensus         3 k~KILV----------tGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v-~~d~~d-~~~~~   70 (312)
T d1qyda_           3 KSRVLI----------VGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI-EASLDD-HQRLV   70 (312)
T ss_dssp             CCCEEE----------ESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE-CCCSSC-HHHHH
T ss_pred             CCEEEE----------ECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEE-Eeeccc-chhhh
Confidence            356999          999999999999999999999999998542     2222   233444332 222222 23344


Q ss_pred             HHhCCCcccEEEeCCCh
Q 019790          212 EETGGKGVDVILDCMGA  228 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g~  228 (335)
                      +...  +.+.++.+.+.
T Consensus        71 ~~~~--~~~~~~~~~~~   85 (312)
T d1qyda_          71 DALK--QVDVVISALAG   85 (312)
T ss_dssp             HHHT--TCSEEEECCCC
T ss_pred             hhcc--Ccchhhhhhhh
Confidence            4443  46778876653

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.41  E-value=2.1  Score=32.67  Aligned_cols=102  Identities=19%  Similarity=0.240  Sum_probs=59.2

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH----cCCCE-EEeCCCccHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD----LGADV-CINYKTEDFV  207 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~  207 (335)
                      ....++++.+ +|          . +.+.|-.+-.+++.. +.+|++++++++..+.+++    ++... .++.+...+.
T Consensus        18 ~l~~~~~~~~-lD----------~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~   85 (192)
T d1m6ya2          18 FLKPEDEKII-LD----------C-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD   85 (192)
T ss_dssp             HHCCCTTCEE-EE----------T-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred             hhCCCCCCEE-EE----------e-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHH
Confidence            3456777754 42          2 333344444555554 6799999999999988875    34333 3333334443


Q ss_pred             HHHHHHhCCCcccEEEeCCC--h--------------hhHHHhhccccCCCEEEEEe
Q 019790          208 ARVKEETGGKGVDVILDCMG--A--------------SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g--~--------------~~~~~~~~~l~~~G~~v~~g  248 (335)
                      . +.+..+...+|.|+--.|  +              ..+..+.+.|+++|+++.+.
T Consensus        86 ~-~~~~~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2          86 F-LLKTLGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             H-HHHHTTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred             H-HHHHcCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeec
Confidence            3 333444457887753222  1              12356778888999887764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.37  E-value=0.37  Score=37.76  Aligned_cols=99  Identities=13%  Similarity=0.079  Sum_probs=61.7

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVA  208 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~  208 (335)
                      ...++||++||=          .|  .+.|..+..+++..+ .+|++++-+++..+.+++    .+....+..+.... .
T Consensus        51 ~l~lkpg~~VLD----------lG--cG~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~-~  117 (209)
T d1nt2a_          51 RLKLRGDERVLY----------LG--AASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKP-W  117 (209)
T ss_dssp             CCCCCSSCEEEE----------ET--CTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCG-G
T ss_pred             cCCCCCCCEEEE----------eC--CcCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCc-c
Confidence            467899999998          77  445677777887775 489999999988777643    33222222221111 0


Q ss_pred             HHHHHhCCCcccEEEeCCCh-----hhHHHhhccccCCCEEEEE
Q 019790          209 RVKEETGGKGVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  247 (335)
                      ....  ....+|+++.....     ..+..+.+.|+++|+++.+
T Consensus       118 ~~~~--~~~~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         118 KYSG--IVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             GTTT--TCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccc--ccceEEEEEecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence            1000  11246777654432     1246678899999999866

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.34  E-value=0.85  Score=33.82  Aligned_cols=81  Identities=15%  Similarity=0.077  Sum_probs=54.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhh-HHH-
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-FQR-  233 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-~~~-  233 (335)
                      .| .|.+|...+.-+...|++|++.++++++.+.+.+.+.....     ...    +..  ...|+++-|+.... ... 
T Consensus         7 IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~----e~~--~~~diii~~v~~~~~~~~v   74 (162)
T d3cuma2           7 IG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAAR-----SAR----DAV--QGADVVISMLPASQHVEGL   74 (162)
T ss_dssp             EC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECS-----SHH----HHH--TSCSEEEECCSCHHHHHHH
T ss_pred             EE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccc-----hhh----hhc--cccCeeeecccchhhHHHH
Confidence            66 89999988887777899999999999999888887764321     111    222  24788888888643 222 


Q ss_pred             ------hhccccCCCEEEEEe
Q 019790          234 ------NLGSLNIDGRLFIIG  248 (335)
Q Consensus       234 ------~~~~l~~~G~~v~~g  248 (335)
                            ....+.++-.++.++
T Consensus        75 ~~~~~~~~~~l~~g~iiid~s   95 (162)
T d3cuma2          75 YLDDDGLLAHIAPGTLVLECS   95 (162)
T ss_dssp             HHSTTCHHHHSCTTCEEEECS
T ss_pred             HhccccccccCCCCCEEEECC
Confidence                  233355555555554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.23  E-value=0.1  Score=37.34  Aligned_cols=62  Identities=15%  Similarity=0.065  Sum_probs=41.6

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      ++++|          .| .|.+|+-+++++..+|.+|+++.+.+.-            +..-+.+..+.+.+.....+++
T Consensus        24 ~~~vI----------iG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~------------l~~~d~ei~~~l~~~l~~~GV~   80 (122)
T d1v59a2          24 KRLTI----------IG-GGIIGLEMGSVYSRLGSKVTVVEFQPQI------------GASMDGEVAKATQKFLKKQGLD   80 (122)
T ss_dssp             SEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSSSS------------SSSSCHHHHHHHHHHHHHTTCE
T ss_pred             CeEEE----------EC-CCchHHHHHHHHHhhCcceeEEEecccc------------chhhhhhhHHHHHHHHHhccce
Confidence            57877          77 6999999999999999999999976421            1222233444444444444566


Q ss_pred             EEEeC
Q 019790          221 VILDC  225 (335)
Q Consensus       221 ~vid~  225 (335)
                      +.+++
T Consensus        81 i~~~~   85 (122)
T d1v59a2          81 FKLST   85 (122)
T ss_dssp             EECSE
T ss_pred             EEeCC
Confidence            66643

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.22  E-value=0.31  Score=41.47  Aligned_cols=29  Identities=14%  Similarity=0.121  Sum_probs=25.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      +||+|-+|..++..+...|.+|+++++..
T Consensus         7 TGatGfiGs~lv~~Ll~~g~~V~~~~r~~   35 (357)
T d1db3a_           7 TGVTGQDGSYLAEFLLEKGYEVHGIKRRA   35 (357)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             eCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            99999999999999999999999999743

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.15  E-value=0.48  Score=37.70  Aligned_cols=100  Identities=14%  Similarity=0.042  Sum_probs=62.8

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHHc----CCCEEEeCCCccHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDL----GADVCINYKTEDFV  207 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~  207 (335)
                      ....++||++||=          .|  .+.|..+..+++.. +.+|++++-++...+.+++.    .....+........
T Consensus        68 ~~l~ikpG~~VLD----------lG--cGsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~  135 (230)
T d1g8sa_          68 KVMPIKRDSKILY----------LG--ASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ  135 (230)
T ss_dssp             CCCCCCTTCEEEE----------ES--CCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG
T ss_pred             HhCCCCCCCEEEE----------eC--EEcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc
Confidence            4567899999999          87  45577788888865 35999999999988877653    22222322222211


Q ss_pred             HHHHHHhCCCcccEEEeCCCh-----hhHHHhhccccCCCEEEEE
Q 019790          208 ARVKEETGGKGVDVILDCMGA-----SYFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       208 ~~~~~~~~~~~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~  247 (335)
                       .....  ...+|+++.....     ..+..+...|+++|+++..
T Consensus       136 -~~~~~--~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~  177 (230)
T d1g8sa_         136 -EYANI--VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             -GGTTT--CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccc--cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEE
Confidence             11111  1235566654432     1246678889999998765

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.01  E-value=0.27  Score=38.72  Aligned_cols=98  Identities=17%  Similarity=0.216  Sum_probs=59.1

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHH----HcCCC---EEEeCCCccH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDF  206 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~  206 (335)
                      +..+..+||-          +|  +..|..++.+|+++  +.+|+.++.+++..+.++    ..|..   .++..+..+.
T Consensus        53 ~~~kpk~ILE----------iG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~  120 (214)
T d2cl5a1          53 REYSPSLVLE----------LG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDL  120 (214)
T ss_dssp             HHHCCSEEEE----------EC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred             HhhCCCEEEE----------Ec--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccccc
Confidence            3344567888          77  56788888889876  579999999888776664    34432   1222222222


Q ss_pred             HHHHHHHhCCCcccEEEeCCChh-h-----HHHhhccccCCCEEE
Q 019790          207 VARVKEETGGKGVDVILDCMGAS-Y-----FQRNLGSLNIDGRLF  245 (335)
Q Consensus       207 ~~~~~~~~~~~~~d~vid~~g~~-~-----~~~~~~~l~~~G~~v  245 (335)
                      ...+.+......||++|--.... .     +...++.|+++|-++
T Consensus       121 l~~l~~~~~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv  165 (214)
T d2cl5a1         121 IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLL  165 (214)
T ss_dssp             GGGHHHHSCCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEE
T ss_pred             ccchhhcccccccceeeecccccccccHHHHHHHhCccCCCcEEE
Confidence            22333333445799887433322 1     345677899988554

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.93  E-value=0.17  Score=35.62  Aligned_cols=62  Identities=26%  Similarity=0.286  Sum_probs=42.2

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCccc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD  220 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (335)
                      ++++|          .| .|.+|+-+++.+..+|.+|+++.+.+.-+            ..-+.+..+.+.+....++++
T Consensus        23 ~~v~I----------iG-gG~ig~E~A~~l~~~G~~Vtlve~~~~il------------~~~d~~~~~~l~~~l~~~GI~   79 (117)
T d1ebda2          23 KSLVV----------IG-GGYIGIELGTAYANFGTKVTILEGAGEIL------------SGFEKQMAAIIKKRLKKKGVE   79 (117)
T ss_dssp             SEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSSSSS------------TTSCHHHHHHHHHHHHHTTCE
T ss_pred             CeEEE----------EC-CCccceeeeeeecccccEEEEEEecceec------------ccccchhHHHHHHHHHhcCCE
Confidence            57888          77 69999999999999999999999765321            111233444444444445677


Q ss_pred             EEEeC
Q 019790          221 VILDC  225 (335)
Q Consensus       221 ~vid~  225 (335)
                      +..++
T Consensus        80 i~~~~   84 (117)
T d1ebda2          80 VVTNA   84 (117)
T ss_dssp             EEESE
T ss_pred             EEcCC
Confidence            76643

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.86  E-value=0.26  Score=37.77  Aligned_cols=83  Identities=17%  Similarity=0.142  Sum_probs=58.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          +| .|.+|...+++++..|++|++.+++..+       +.....    .+    +.+...  .
T Consensus        41 ~gk~vgI----------iG-~G~IG~~va~~l~~~g~~v~~~d~~~~~-------~~~~~~----~~----l~ell~--~   92 (181)
T d1qp8a1          41 QGEKVAV----------LG-LGEIGTRVGKILAALGAQVRGFSRTPKE-------GPWRFT----NS----LEEALR--E   92 (181)
T ss_dssp             TTCEEEE----------ES-CSTHHHHHHHHHHHTTCEEEEECSSCCC-------SSSCCB----SC----SHHHHT--T
T ss_pred             cCceEEE----------ec-cccccccceeeeeccccccccccccccc-------cceeee----ec----hhhhhh--c
Confidence            5778988          87 8999999999999999999999976432       111111    12    223332  4


Q ss_pred             ccEEEeCCChh----h--HHHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGAS----Y--FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~----~--~~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|+-++.-.    .  -...+..|+++..++.++.
T Consensus        93 sDiv~~~~pl~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1          93 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             cchhhcccccccccccccccceeeeccccceEEeccc
Confidence            79999877642    1  1567888999998888763

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=89.67  E-value=1.8  Score=31.43  Aligned_cols=88  Identities=18%  Similarity=0.083  Sum_probs=55.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhH-HHH---HHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChhhH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVC---KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF  231 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~-~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~  231 (335)
                      .| .|.+|..+++.+...|.+|++++.++++. +.+   ...+... +..+..+ .+.+ +..+-..+|.++-+++.+..
T Consensus         9 ~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~v-i~Gd~~d-~~~L-~~a~i~~a~~vi~~~~~d~~   84 (153)
T d1id1a_           9 CG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADV-IPGDSND-SSVL-KKAGIDRCRAILALSDNDAD   84 (153)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEE-EESCTTS-HHHH-HHHTTTTCSEEEECSSCHHH
T ss_pred             EC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEE-EEccCcc-hHHH-HHhccccCCEEEEccccHHH
Confidence            66 79999999999999999999998776542 222   2334443 3333332 2233 33344578999999887542


Q ss_pred             ----HHhhccccCCCEEEEE
Q 019790          232 ----QRNLGSLNIDGRLFII  247 (335)
Q Consensus       232 ----~~~~~~l~~~G~~v~~  247 (335)
                          ....+.+.+.-+++..
T Consensus        85 n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          85 NAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             HHHHHHHHHHHTSSSCEEEE
T ss_pred             HHHHHHHHHHhCCCCceEEE
Confidence                2334556666666654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.65  E-value=0.13  Score=36.83  Aligned_cols=63  Identities=16%  Similarity=0.115  Sum_probs=42.6

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcc
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV  219 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  219 (335)
                      .++++|          .| .|.+|+-+++++..+|.+|+++.+++.-+            ...+......+.+.....++
T Consensus        25 p~~~vi----------iG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l------------~~~d~~~~~~l~~~l~~~GI   81 (123)
T d1dxla2          25 PKKLVV----------IG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV------------PTMDAEIRKQFQRSLEKQGM   81 (123)
T ss_dssp             CSEEEE----------SC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS------------TTSCHHHHHHHHHHHHHSSC
T ss_pred             CCeEEE----------Ec-cchHHHHHHHHHHhcCCeEEEEEEccccC------------chhhhcchhhhhhhhhcccc
Confidence            467888          87 69999999999999999999999765321            11223334444444444566


Q ss_pred             cEEEeC
Q 019790          220 DVILDC  225 (335)
Q Consensus       220 d~vid~  225 (335)
                      ++..++
T Consensus        82 ~i~~~~   87 (123)
T d1dxla2          82 KFKLKT   87 (123)
T ss_dssp             CEECSE
T ss_pred             eEEcCC
Confidence            666543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.53  E-value=0.17  Score=36.11  Aligned_cols=57  Identities=18%  Similarity=0.158  Sum_probs=38.8

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM  226 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~  226 (335)
                      .| .|.+|+-++++++.+|.+|+++.+++    .+         ..-+.+..+.+.+.....++++..++.
T Consensus        26 IG-gG~iG~E~A~~l~~lG~~Vtii~~~~----~l---------~~~D~~~~~~l~~~l~~~Gv~i~~~~~   82 (122)
T d1h6va2          26 VG-ASYVALECAGFLAGIGLDVTVMVRSI----LL---------RGFDQDMANKIGEHMEEHGIKFIRQFV   82 (122)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEEESSS----SS---------TTSCHHHHHHHHHHHHHTTEEEEESCE
T ss_pred             EC-CCccHHHHHHHHhhcCCeEEEEEech----hh---------ccCCHHHHHHHHHHHHHCCCEEEECCE
Confidence            66 79999999999999999999998642    11         112233445555555555777776543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.37  E-value=0.8  Score=38.35  Aligned_cols=39  Identities=10%  Similarity=0.051  Sum_probs=31.0

Q ss_pred             CCEEEEeecccccccccc--ccchHHHHHHHHHhhCCCeEEEEecChhhHH
Q 019790          140 GESFLVDFCSISYSDVHG--GSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA  188 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g--~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~  188 (335)
                      ++..||          +|  ++.++|.++++.+-..|++|+++.++.....
T Consensus         2 ~kVAlI----------TGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFI----------AGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEE----------ECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred             CcEEEE----------eCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence            456688          88  4469999999999999999999887665443

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.30  E-value=0.16  Score=40.54  Aligned_cols=36  Identities=42%  Similarity=0.476  Sum_probs=31.9

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      .++||          +||++++|.+.++.+...|++|+++.++++.
T Consensus         2 K~alI----------TGas~GIG~aiA~~la~~Ga~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALV----------TGGASGLGRAAALALKARGYRVVVLDLRREG   37 (241)
T ss_dssp             CEEEE----------ETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred             CEEEE----------eCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence            46788          9999999999999999999999999987653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=89.29  E-value=0.54  Score=35.49  Aligned_cols=39  Identities=18%  Similarity=0.014  Sum_probs=33.7

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA  195 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~  195 (335)
                      +| .|.+|...+.-+...|.+|++.++++++.+.+.+.++
T Consensus         8 IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           8 IG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT
T ss_pred             Ee-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcc
Confidence            66 8999999888888889999999999999888876543

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.24  E-value=0.76  Score=34.55  Aligned_cols=96  Identities=19%  Similarity=0.280  Sum_probs=54.1

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH----HcCC-CEEEeCCCccHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGA-DVCINYKTEDFVARV  210 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~----~~g~-~~~~~~~~~~~~~~~  210 (335)
                      .+.+|.+||=-         ..|+|.+|+.+    ...|++|+.++.+++..+.++    .++. +.+...+...+... 
T Consensus        38 ~~~~g~~vLDl---------~~G~G~~~i~a----~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~-  103 (171)
T d1ws6a1          38 RYPRRGRFLDP---------FAGSGAVGLEA----ASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPE-  103 (171)
T ss_dssp             HCTTCCEEEEE---------TCSSCHHHHHH----HHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHH-
T ss_pred             cccCCCeEEEe---------ccccchhhhhh----hhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhccccc-
Confidence            45677777651         33567666532    235899999999988887765    3444 34443332222221 


Q ss_pred             HHHhCCCcccEEEeC----CCh-hhHHHh--hccccCCCEEEE
Q 019790          211 KEETGGKGVDVILDC----MGA-SYFQRN--LGSLNIDGRLFI  246 (335)
Q Consensus       211 ~~~~~~~~~d~vid~----~g~-~~~~~~--~~~l~~~G~~v~  246 (335)
                       ....+..||+||-.    .+- ..+...  -..++++|.++.
T Consensus       104 -~~~~~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi  145 (171)
T d1ws6a1         104 -AKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVL  145 (171)
T ss_dssp             -HHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred             -ccccCCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence             12334579999742    222 223332  246788887664

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=89.21  E-value=0.51  Score=39.56  Aligned_cols=73  Identities=22%  Similarity=0.268  Sum_probs=46.0

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec----ChhhHHHHH---HcCCCEE-EeCCCccHHHHHHHH
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG----SEEKLAVCK---DLGADVC-INYKTEDFVARVKEE  213 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~----~~~~~~~~~---~~g~~~~-~~~~~~~~~~~~~~~  213 (335)
                      +|||          +||+|-+|..++..+...|.+|+++++    .........   .-....+ .|-.+.   +.+.+.
T Consensus         2 KiLI----------tG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~l~~~   68 (338)
T d1udca_           2 RVLV----------TGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE---ALMTEI   68 (338)
T ss_dssp             EEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH---HHHHHH
T ss_pred             EEEE----------ECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCH---HHHHHH
Confidence            6899          999999999999999999999999874    122222222   2223222 122232   233333


Q ss_pred             hCCCcccEEEeCCC
Q 019790          214 TGGKGVDVILDCMG  227 (335)
Q Consensus       214 ~~~~~~d~vid~~g  227 (335)
                      ....++|+||.+++
T Consensus        69 ~~~~~~d~ViHlAa   82 (338)
T d1udca_          69 LHDHAIDTVIHFAG   82 (338)
T ss_dssp             HHHTTCSEEEECCS
T ss_pred             HhccCCCEEEECCC
Confidence            32246999999774

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=89.20  E-value=0.43  Score=38.08  Aligned_cols=89  Identities=16%  Similarity=0.198  Sum_probs=57.0

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EEEeCCCccHHHHHHH
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKE  212 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~  212 (335)
                      .++.+||-          .|  .+.|..+..+++. |.+|++++.|++.++.+++    .+.. .++..+-       .+
T Consensus        36 ~~~~~vLD----------iG--CG~G~~~~~l~~~-g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~-------~~   95 (246)
T d1y8ca_          36 LVFDDYLD----------LA--CGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDI-------SN   95 (246)
T ss_dssp             CCTTEEEE----------ET--CTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCG-------GG
T ss_pred             CCCCeEEE----------Ee--CcCCHHHHHHHHh-CCccEeeccchhhhhhccccccccCccceeeccch-------hh
Confidence            34467877          66  3467777777765 8899999999998877753    3332 2222211       12


Q ss_pred             HhCCCcccEEEeCCCh-----------hhHHHhhccccCCCEEEE
Q 019790          213 ETGGKGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFI  246 (335)
Q Consensus       213 ~~~~~~~d~vid~~g~-----------~~~~~~~~~l~~~G~~v~  246 (335)
                      ....+.||+|+-..+.           ..+..+.+.|+++|.++.
T Consensus        96 ~~~~~~fD~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_          96 LNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             CCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             hcccccccccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            2223579999853221           125678899999999874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.13  E-value=0.4  Score=40.64  Aligned_cols=75  Identities=15%  Similarity=0.125  Sum_probs=48.2

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+.+|||          +||+|-+|..++..+...|.+|+++++....... ...........+-.+. +.+.+..  .+
T Consensus        14 ~nMKILV----------TGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~-~~~~~~~--~~   79 (363)
T d2c5aa1          14 ENLKISI----------TGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVM-ENCLKVT--EG   79 (363)
T ss_dssp             SCCEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSH-HHHHHHH--TT
T ss_pred             CCCEEEE----------ECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhH-HHHHHHh--hc
Confidence            5789999          9999999999999999999999999754332111 1122222222222222 2333333  36


Q ss_pred             ccEEEeCCC
Q 019790          219 VDVILDCMG  227 (335)
Q Consensus       219 ~d~vid~~g  227 (335)
                      +|.|+.+++
T Consensus        80 ~d~Vih~a~   88 (363)
T d2c5aa1          80 VDHVFNLAA   88 (363)
T ss_dssp             CSEEEECCC
T ss_pred             CCeEeeccc
Confidence            899998774

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.03  E-value=0.061  Score=42.87  Aligned_cols=93  Identities=12%  Similarity=0.195  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhh---CCCeEEEEecChhhHHHHHHc----CC--CE-EEeCCCcc
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKC---QGVRVFVTAGSEEKLAVCKDL----GA--DV-CINYKTED  205 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~---~g~~V~~~~~~~~~~~~~~~~----g~--~~-~~~~~~~~  205 (335)
                      .++++.+||-          .|  .+.|..+..+++.   .+++|++++.+++.++.+++.    +.  .. ..+.+..+
T Consensus        36 ~~~~~~~vLD----------lG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~  103 (225)
T d1im8a_          36 FVTADSNVYD----------LG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRH  103 (225)
T ss_dssp             HCCTTCEEEE----------ES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTT
T ss_pred             hcCCCCEEEE----------ec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhc
Confidence            3578888888          77  5567666677764   488999999999988888642    21  11 12211111


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC-----h----hhHHHhhccccCCCEEEEEe
Q 019790          206 FVARVKEETGGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g  248 (335)
                             . ....+|+++-+..     .    ..+.++.+.|+|+|.++...
T Consensus       104 -------~-~~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         104 -------V-EIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             -------C-CCCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -------c-ccccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence                   1 1235676654322     1    23678899999999998764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.98  E-value=0.69  Score=34.92  Aligned_cols=51  Identities=8%  Similarity=0.031  Sum_probs=37.4

Q ss_pred             HHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH
Q 019790          129 STVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK  191 (335)
Q Consensus       129 ~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~  191 (335)
                      .+|.+...--++.++||          +| +|+++.+++..+...| +|+++.|+.++.+.+.
T Consensus         7 ~~l~~~~~~~~~k~vlI----------lG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~   57 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVI----------YG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALA   57 (177)
T ss_dssp             HHHHHHHCCCCSCEEEE----------EC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEE----------EC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHH
Confidence            34444333346778999          88 7999998887776656 9999999988876653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.78  E-value=0.25  Score=34.91  Aligned_cols=33  Identities=21%  Similarity=0.087  Sum_probs=29.4

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ++++|          .| .|.+|+-+++.+..+|.+|+++.+++
T Consensus        23 ~~i~I----------iG-~G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          23 GKLGV----------IG-AGVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CeEEE----------EC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence            67888          77 69999999999999999999999764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=88.73  E-value=1  Score=37.66  Aligned_cols=37  Identities=19%  Similarity=0.200  Sum_probs=33.0

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      ..+|+|          +||+|-+|..++..+...|.+|++++|+...
T Consensus         3 kktIlV----------tGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~   39 (350)
T d1xgka_           3 KKTIAV----------VGATGRQGASLIRVAAAVGHHVRAQVHSLKG   39 (350)
T ss_dssp             CCCEEE----------ESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred             CCEEEE----------ECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence            467999          9999999999999999999999999987554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.62  E-value=0.13  Score=40.96  Aligned_cols=74  Identities=16%  Similarity=0.256  Sum_probs=47.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCCEE-EeCCCccHHHHHHHHhCC
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGG  216 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~  216 (335)
                      +.+|||          +||+|-+|..+++.+...|.  +|++++|++.....-........ .|..+   .+.+.+..  
T Consensus        14 ~k~IlI----------tGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~---~~~~~~~~--   78 (232)
T d2bkaa1          14 NKSVFI----------LGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK---LDDYASAF--   78 (232)
T ss_dssp             CCEEEE----------ECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG---GGGGGGGG--
T ss_pred             CCEEEE----------ECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc---cccccccc--
Confidence            468999          99999999999999888885  89999986543221111111111 12221   12333333  


Q ss_pred             CcccEEEeCCCh
Q 019790          217 KGVDVILDCMGA  228 (335)
Q Consensus       217 ~~~d~vid~~g~  228 (335)
                      .++|++|.|+|.
T Consensus        79 ~~~d~vi~~~~~   90 (232)
T d2bkaa1          79 QGHDVGFCCLGT   90 (232)
T ss_dssp             SSCSEEEECCCC
T ss_pred             cccccccccccc
Confidence            368999999874

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.58  E-value=0.14  Score=36.15  Aligned_cols=33  Identities=18%  Similarity=0.077  Sum_probs=29.2

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      ++++|          .| .|.+|+-+++.++.+|.+|+++.+.+
T Consensus        22 ~~vvI----------iG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAV----------VG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEE----------EC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            56777          77 69999999999999999999999765

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.48  E-value=1.2  Score=33.36  Aligned_cols=97  Identities=13%  Similarity=0.083  Sum_probs=67.4

Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCE
Q 019790          118 AAFPEVACTVWSTVFMTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV  197 (335)
Q Consensus       118 a~~~~~~~~a~~~l~~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~  197 (335)
                      +.+|+.....+..|.+..---.|.+++|          .|.+..+|.-+..++...|++|+......             
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvV----------IGrS~iVGrPLa~lL~~~gatVt~~~~~t-------------   73 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVV----------VGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------   73 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEE----------ECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEE----------EecCCccchHHHHHHHhccCceEEEeccc-------------
Confidence            3456666666666644443357889999          99899999999999999999999876322             


Q ss_pred             EEeCCCccHHHHHHHHhCCCcccEEEeCCChhhHHHhhccccCCCEEEEEecc
Q 019790          198 CINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                            .+.    .+.+  +..|+++-++|...+.. -++++++--++.+|..
T Consensus        74 ------~~l----~~~~--~~aDivi~a~G~~~~i~-~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          74 ------AHL----DEEV--NKGDILVVATGQPEMVK-GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ------SSH----HHHH--TTCSEEEECCCCTTCBC-GGGSCTTCEEEECCCB
T ss_pred             ------ccH----HHHH--hhccchhhccccccccc-cccccCCCeEeccCcc
Confidence                  111    1122  25799999999865422 4577888888888754

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.45  E-value=0.51  Score=36.22  Aligned_cols=89  Identities=11%  Similarity=-0.042  Sum_probs=60.9

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+.++.|          .| .|.+|...+++++..|.+|...++...........+....     .+    +.+..  +.
T Consensus        43 ~~~~vgi----------iG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~-----~~----l~~~l--~~  100 (188)
T d2naca1          43 EAMHVGT----------VA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----AT----REDMY--PV  100 (188)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SS----HHHHG--GG
T ss_pred             cccceee----------cc-ccccchhhhhhhhccCceEEEEeecccccccccccccccc-----CC----HHHHH--Hh
Confidence            4678888          77 8999999999999999999999976555555444443221     11    22222  24


Q ss_pred             ccEEEeCCChhh------HHHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY------FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~------~~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|.-+.....      ..+.+..|+++..+|-++.
T Consensus       101 sD~v~~~~plt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         101 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             ccchhhcccccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            788888776421      2567888888887776653

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.23  E-value=0.57  Score=36.69  Aligned_cols=96  Identities=21%  Similarity=0.177  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC----CC--EEEeCCCccHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG----AD--VCINYKTEDFVAR  209 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g----~~--~~~~~~~~~~~~~  209 (335)
                      ...++.+||-          .|  ++.|..+..+++..+.+|++++.+++..+.+++..    ..  ..+..+..++   
T Consensus        57 ~~~~~~~vLD----------iG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~---  121 (222)
T d2ex4a1          57 NKTGTSCALD----------CG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF---  121 (222)
T ss_dssp             -CCCCSEEEE----------ET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC---
T ss_pred             CCCCCCEEEE----------ec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccc---
Confidence            4466778887          77  66788888888777779999999999988887532    21  1222221111   


Q ss_pred             HHHHhCCCcccEEEeC-----CChh----hHHHhhccccCCCEEEEEec
Q 019790          210 VKEETGGKGVDVILDC-----MGAS----YFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~-----~g~~----~~~~~~~~l~~~G~~v~~g~  249 (335)
                         ......||+|+..     ++.+    .+..+.+.|+++|.++....
T Consensus       122 ---~~~~~~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         122 ---TPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             ---CCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ---ccccccccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence               0123579999863     3322    34667888999999987643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=88.18  E-value=1.8  Score=33.03  Aligned_cols=89  Identities=8%  Similarity=-0.003  Sum_probs=59.3

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .|.++.|          +| .|.+|...+++++..|++|+..++...........+... .    .++.+.+ .     .
T Consensus        46 ~g~tvgI----------iG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~-~----~~l~~ll-~-----~  103 (191)
T d1gdha1          46 DNKTLGI----------YG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF-H----DSLDSLL-S-----V  103 (191)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE-C----SSHHHHH-H-----H
T ss_pred             cccceEE----------ee-cccchHHHHHHHHhhccccccccccccccchhhcccccc-c----CCHHHHH-h-----h
Confidence            3678888          77 899999999999999999999987654433333332211 1    1222222 1     3


Q ss_pred             ccEEEeCCChh----h--HHHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGAS----Y--FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~----~--~~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|..+..-.    .  -...+..|+++..+|-++.
T Consensus       104 sD~v~l~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  140 (191)
T d1gdha1         104 SQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTAR  140 (191)
T ss_dssp             CSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             CCeEEecCCCCchHhheecHHHhhCcCCccEEEecCC
Confidence            68998877542    1  1567888998888887654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.01  E-value=0.69  Score=35.47  Aligned_cols=95  Identities=19%  Similarity=0.156  Sum_probs=58.8

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCCE-EEeCCCccHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CINYKTEDFVARV  210 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~  210 (335)
                      .+.+| +||-          +|  ++.|..+..+++. |++|++++.+++..+.++.    .+.+. .+...+.      
T Consensus        28 ~~~~g-rvLD----------iG--cG~G~~~~~la~~-g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~------   87 (198)
T d2i6ga1          28 VVAPG-RTLD----------LG--CGNGRNSLYLAAN-GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDL------   87 (198)
T ss_dssp             TSCSC-EEEE----------ET--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCT------
T ss_pred             cCCCC-cEEE----------EC--CCCCHHHHHHHHH-hhhhccccCcHHHHHHHHHHhhhccccchhhhheec------
Confidence            34555 7777          66  3478888888764 9999999999988876653    34332 1111110      


Q ss_pred             HHHhCCCcccEEEeCCC-----h----hhHHHhhccccCCCEEEEEecc
Q 019790          211 KEETGGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       211 ~~~~~~~~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~~  250 (335)
                      .+......||+|+....     .    ..+..+.+.|+++|.++.....
T Consensus        88 ~~~~~~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1          88 NTLTFDGEYDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             TTCCCCCCEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             ccccccccccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            01111246999986332     1    1346678889999998876443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.88  E-value=2.3  Score=32.12  Aligned_cols=87  Identities=15%  Similarity=0.062  Sum_probs=58.7

Q ss_pred             CCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          139 PGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+.++.|          .| .|.+|...+++++..|++|++.++....... ...+...      .++.+.+ +     .
T Consensus        43 ~~k~vgi----------iG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-~~~~~~~------~~l~ell-~-----~   98 (184)
T d1ygya1          43 FGKTVGV----------VG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARA-AQLGIEL------LSLDDLL-A-----R   98 (184)
T ss_dssp             TTCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHH-HHHTCEE------CCHHHHH-H-----H
T ss_pred             cceeeee----------cc-ccchhHHHHHHhhhccceEEeecCCCChhHH-hhcCcee------ccHHHHH-h-----h
Confidence            4667888          77 8999999999999999999999876544332 2333321      1222222 1     3


Q ss_pred             ccEEEeCCChhh------HHHhhccccCCCEEEEEec
Q 019790          219 VDVILDCMGASY------FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       219 ~d~vid~~g~~~------~~~~~~~l~~~G~~v~~g~  249 (335)
                      .|+|.-+++...      -...+..|+++..++-++.
T Consensus        99 sDiv~~~~Plt~~T~~lin~~~l~~mk~~a~lIN~sR  135 (184)
T d1ygya1          99 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAAR  135 (184)
T ss_dssp             CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred             CCEEEEcCCCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence            799988776421      1567888888888877654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=87.86  E-value=0.24  Score=39.90  Aligned_cols=30  Identities=17%  Similarity=0.268  Sum_probs=27.4

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEE  185 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~  185 (335)
                      +||++++|.++++.+...|++|++++++++
T Consensus         7 TGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           7 SGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             eCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            999999999999999999999999997643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=87.68  E-value=1.2  Score=29.94  Aligned_cols=70  Identities=14%  Similarity=0.178  Sum_probs=45.3

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHH-HHHHhhCCCeEEEEecChh-hHHHHHHcCCCEEEeCCCccHHHHHHHHh
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFA-IQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEET  214 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a-~~~a~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  214 (335)
                      .....++.+          .| -|++|+.+ +++++..|++|...+.... ..+.+.+.|......+.....        
T Consensus         5 ~~~~~~ihf----------iG-igG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i--------   65 (96)
T d1p3da1           5 MRRVQQIHF----------IG-IGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHI--------   65 (96)
T ss_dssp             CTTCCEEEE----------ET-TTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGG--------
T ss_pred             chhCCEEEE----------EE-ECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccC--------
Confidence            345566766          66 67788666 8999999999999997533 445566788754433332211        


Q ss_pred             CCCcccEEEeCCC
Q 019790          215 GGKGVDVILDCMG  227 (335)
Q Consensus       215 ~~~~~d~vid~~g  227 (335)
                        .+.|+++-..+
T Consensus        66 --~~~d~vV~S~A   76 (96)
T d1p3da1          66 --EGASVVVVSSA   76 (96)
T ss_dssp             --TTCSEEEECTT
T ss_pred             --CCCCEEEECCC
Confidence              24677776544

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=87.66  E-value=0.97  Score=36.84  Aligned_cols=96  Identities=15%  Similarity=0.135  Sum_probs=62.8

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhC--CCeEEEEecChhhHHHHHH----cCCCEEEeCCCccHHH
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVA  208 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~--g~~V~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~  208 (335)
                      .++.+..+||-          .|  ++.|..+..+++..  +.+|++++.++...+.+++    .+.+..+...+.    
T Consensus        23 ~~~~~~~~ILD----------iG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~----   86 (281)
T d2gh1a1          23 WKITKPVHIVD----------YG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDA----   86 (281)
T ss_dssp             SCCCSCCEEEE----------ET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCT----
T ss_pred             hccCCcCEEEE----------ec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccc----
Confidence            35667778887          76  34688888888875  5799999999988877764    333322211111    


Q ss_pred             HHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEe
Q 019790          209 RVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       209 ~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g  248 (335)
                        .+..-...||+|+-.-.     .  ..+..+.+.|+|+|+++...
T Consensus        87 --~~~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          87 --TEIELNDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             --TTCCCSSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --ccccccCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence              11111236999986432     2  23678899999999998764

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.65  E-value=0.48  Score=37.29  Aligned_cols=94  Identities=20%  Similarity=0.204  Sum_probs=58.7

Q ss_pred             hcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCC-E-EEeCCCccHHHHHH
Q 019790          134 TSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-V-CINYKTEDFVARVK  211 (335)
Q Consensus       134 ~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~-~-~~~~~~~~~~~~~~  211 (335)
                      ..+..++.+||-          +|  ++.|..+..+++ .|.+|++++.+++..+.+++...+ . .+.....       
T Consensus        15 ~~~~~~~~~VLD----------iG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~-------   74 (225)
T d2p7ia1          15 FTPFFRPGNLLE----------LG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFE-------   74 (225)
T ss_dssp             HGGGCCSSCEEE----------ES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGG-------
T ss_pred             hhhhCCCCcEEE----------Ee--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccc-------
Confidence            334455677887          77  556777776665 488999999999999988764322 2 2222111       


Q ss_pred             HHhCCCcccEEEeCCC-----h--hhHHHhh-ccccCCCEEEEE
Q 019790          212 EETGGKGVDVILDCMG-----A--SYFQRNL-GSLNIDGRLFII  247 (335)
Q Consensus       212 ~~~~~~~~d~vid~~g-----~--~~~~~~~-~~l~~~G~~v~~  247 (335)
                      .....+.||+|+-.--     .  ..+..+. ++|+++|.++..
T Consensus        75 ~~~~~~~fD~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          75 DAQLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             GCCCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccccccccccccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            1122357999985321     1  1234555 679999998764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=87.52  E-value=1.8  Score=33.15  Aligned_cols=89  Identities=15%  Similarity=0.083  Sum_probs=58.4

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK  217 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  217 (335)
                      -.|.++.|          +| .|.+|...+++++..|++|+..++..... .....+....     .++.+-+ +     
T Consensus        47 L~gktvgI----------iG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~-~~~~~~~~~~-----~~l~~ll-~-----  103 (193)
T d1mx3a1          47 IRGETLGI----------IG-LGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRV-----STLQDLL-F-----  103 (193)
T ss_dssp             CTTCEEEE----------EC-CSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEEC-----SSHHHHH-H-----
T ss_pred             eeCceEEE----------ec-cccccccceeeeeccccceeeccCccccc-chhhhccccc-----cchhhcc-c-----
Confidence            35778988          87 89999999999999999999998754332 2222332211     1222222 1     


Q ss_pred             cccEEEeCCChh----h--HHHhhccccCCCEEEEEec
Q 019790          218 GVDVILDCMGAS----Y--FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       218 ~~d~vid~~g~~----~--~~~~~~~l~~~G~~v~~g~  249 (335)
                      ..|+|.-+....    .  -...+..|+++..++-++.
T Consensus       104 ~sD~i~~~~plt~~T~~li~~~~l~~mk~~a~lIN~sR  141 (193)
T d1mx3a1         104 HSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTAR  141 (193)
T ss_dssp             HCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred             cCCEEEEeecccccchhhhhHHHHhccCCCCeEEecCC
Confidence            368888877632    1  1456788888887777654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=87.26  E-value=0.44  Score=33.69  Aligned_cols=67  Identities=19%  Similarity=0.282  Sum_probs=46.8

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      +.++.+++|          .| .|.+|.-++..++.+|.+|+++.+++.-+.           ...+....+.+.+....
T Consensus        27 ~~~~~~vvI----------IG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l~-----------~~~~~~~~~~~~~~l~~   84 (121)
T d1d7ya2          27 LRPQSRLLI----------VG-GGVIGLELAATARTAGVHVSLVETQPRLMS-----------RAAPATLADFVARYHAA   84 (121)
T ss_dssp             CCTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----------TTSCHHHHHHHHHHHHT
T ss_pred             hhcCCeEEE----------EC-cchhHHHHHHHhhcccceEEEEeecccccc-----------ccCCHHHHHHHHHHHHH
Confidence            456788988          87 699999999999999999999997753210           01223344555555555


Q ss_pred             CcccEEEeC
Q 019790          217 KGVDVILDC  225 (335)
Q Consensus       217 ~~~d~vid~  225 (335)
                      .++++..++
T Consensus        85 ~GV~i~~~~   93 (121)
T d1d7ya2          85 QGVDLRFER   93 (121)
T ss_dssp             TTCEEEESC
T ss_pred             CCcEEEeCC
Confidence            677777654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=87.16  E-value=0.74  Score=32.13  Aligned_cols=41  Identities=20%  Similarity=0.182  Sum_probs=35.1

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      +.....++.+++|          .| .|.+|+-++..++.+|.+|.++.+.+
T Consensus        15 ~~l~~~~~~~vvV----------vG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVV----------VG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHHhhCCCCEEEE----------EC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            4456678889999          88 69999999999999999999999764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.00  E-value=1.8  Score=28.56  Aligned_cols=59  Identities=20%  Similarity=0.300  Sum_probs=40.4

Q ss_pred             cchHHHHH-HHHHhhCCCeEEEEecCh-hhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          159 SSGIGTFA-IQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       159 ~g~~G~~a-~~~a~~~g~~V~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      -|++|+.+ +++++.+|+.|...++.+ ...+.+++.|......++...+          ...|+|+-+.+
T Consensus         9 IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i----------~~~d~vV~SsA   69 (89)
T d1j6ua1           9 IGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW----------YDPDLVIKTPA   69 (89)
T ss_dssp             TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC----------CCCSEEEECTT
T ss_pred             ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc----------CCCCEEEEecC
Confidence            57777644 788999999999999865 3456678899876444333322          25788876544

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.96  E-value=1.3  Score=36.99  Aligned_cols=69  Identities=13%  Similarity=0.143  Sum_probs=42.3

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecC----hhhH---HHHHHcCCCEEE-eCCCccHHHHHHHHhCCCcccEEEeCCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGS----EEKL---AVCKDLGADVCI-NYKTEDFVARVKEETGGKGVDVILDCMG  227 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~----~~~~---~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g  227 (335)
                      +||+|-+|..++..+...|.+|+++++.    ....   +....-+...+. |-.+.   +.+.+.....++|+||.+++
T Consensus         7 TGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~l~~~~~~~~~d~VihlAa   83 (347)
T d1z45a2           7 TGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR---KGLEKVFKEYKIDSVIHFAG   83 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCH---HHHHHHHHHSCCCEEEECCS
T ss_pred             eCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCH---HHHHHHHhccCCCEEEEccc
Confidence            9999999999999999999999998641    1111   222222333322 22222   23333332347999999775

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=86.89  E-value=4  Score=29.91  Aligned_cols=87  Identities=22%  Similarity=0.214  Sum_probs=51.5

Q ss_pred             ccccchHHH-HHHHHHhhCC-CeEEEEec-Chh--hHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCcccEEEeCCChh-
Q 019790          156 HGGSSGIGT-FAIQMGKCQG-VRVFVTAG-SEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-  229 (335)
Q Consensus       156 ~g~~g~~G~-~a~~~a~~~g-~~V~~~~~-~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~-  229 (335)
                      .| +|.+|. ...++++... .++++++. +.+  ...++++++......     ..+.+.+......+|+||+|++.. 
T Consensus        10 IG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-----~~d~l~~~~~~~~iDiVf~ATpag~   83 (157)
T d1nvmb1          10 IG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-----GVEGLIKLPEFADIDFVFDATSASA   83 (157)
T ss_dssp             EC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-----HHHHHHHSGGGGGEEEEEECSCHHH
T ss_pred             Ec-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-----ceeeeeecccccccCEEEEcCCchh
Confidence            77 899986 5678887764 47777763 433  345667787655321     122333332234699999998863 


Q ss_pred             hHHH--hhccccCCCEEEEEe
Q 019790          230 YFQR--NLGSLNIDGRLFIIG  248 (335)
Q Consensus       230 ~~~~--~~~~l~~~G~~v~~g  248 (335)
                      +...  ....++.|-.++...
T Consensus        84 h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          84 HVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             HHHHHHHHHHHCTTCEEEECS
T ss_pred             HHHhHHHHHHHHcCCEEEEcc
Confidence            4433  344455555555543

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.88  E-value=0.61  Score=35.87  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=30.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      .| +|.+|...++++...|++|++.+++++.++.+
T Consensus        10 iG-aG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2          10 IG-GGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EC-cCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            88 69999999999999999999999998876554

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.73  E-value=0.2  Score=35.84  Aligned_cols=33  Identities=9%  Similarity=0.061  Sum_probs=29.3

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .+++|          .| .|.+|+-++..++.+|.+|+++.+++
T Consensus        23 k~vvI----------vG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVI----------VG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEE----------Ec-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            57888          77 69999999999999999999999864

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.53  E-value=0.64  Score=35.26  Aligned_cols=79  Identities=13%  Similarity=0.008  Sum_probs=46.1

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecCh--hhHHHHHHcCCC----EEEeCCCccHHHHHHHHhCCCcccEEEeCCChh
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVCKDLGAD----VCINYKTEDFVARVKEETGGKGVDVILDCMGAS  229 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~--~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~  229 (335)
                      +| +|.+|.+.+..+-..|.+|....|..  +..+.+++...+    ..+....-.....+.+..  ...|+|+-++.+.
T Consensus         6 iG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~ad~Ii~avps~   82 (180)
T d1txga2           6 LG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL--ENAEVVLLGVSTD   82 (180)
T ss_dssp             ES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH--TTCSEEEECSCGG
T ss_pred             EC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH--hccchhhcccchh
Confidence            77 79999999999988899999988743  333444322110    000000001112233333  2589999999987


Q ss_pred             hHHHhhcc
Q 019790          230 YFQRNLGS  237 (335)
Q Consensus       230 ~~~~~~~~  237 (335)
                      .+...++.
T Consensus        83 ~~~~~~~~   90 (180)
T d1txga2          83 GVLPVMSR   90 (180)
T ss_dssp             GHHHHHHH
T ss_pred             hhHHHHHh
Confidence            66554443

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=86.46  E-value=0.71  Score=35.05  Aligned_cols=88  Identities=14%  Similarity=0.139  Sum_probs=50.2

Q ss_pred             ccccchHHHHHHHHHhhC-CCeEEEEecCh--hhHHHHHHcCCCEEEeCC------------CccHHHHHHHHhCCCccc
Q 019790          156 HGGSSGIGTFAIQMGKCQ-GVRVFVTAGSE--EKLAVCKDLGADVCINYK------------TEDFVARVKEETGGKGVD  220 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~--~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~d  220 (335)
                      .| .|.+|....+.+... +.+++++....  .....+...+........            ...+....      .+.|
T Consensus         7 NG-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~------~~vD   79 (178)
T d1b7go1           7 NG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI------KTSD   79 (178)
T ss_dssp             EC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH------HHCS
T ss_pred             EC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh------hcCC
Confidence            66 899999999998877 46888886532  223333333322211100            01111110      1589


Q ss_pred             EEEeCCChhh-HHHhhccccCCCEEEEEecc
Q 019790          221 VILDCMGASY-FQRNLGSLNIDGRLFIIGTQ  250 (335)
Q Consensus       221 ~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~  250 (335)
                      +|+||+|... ...+-..++.+-+++..+..
T Consensus        80 iViecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          80 IVVDTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             EEEECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            9999999743 44555666666577665443

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.27  E-value=0.33  Score=34.66  Aligned_cols=34  Identities=21%  Similarity=0.121  Sum_probs=29.8

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .++++|          .| .|.+|+-++++++.+|.+|+++.+.+
T Consensus        26 p~~vvI----------iG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLI----------IG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEE----------ES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEE----------EC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            467888          77 69999999999999999999998754

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=86.18  E-value=1.9  Score=32.25  Aligned_cols=93  Identities=13%  Similarity=0.158  Sum_probs=53.5

Q ss_pred             ccccchHHHHHHHHHhhCC-CeEEEEecC--hhhHHHHHHcCCCEEEeCCCcc--HHH-------HHHHHhCCCcccEEE
Q 019790          156 HGGSSGIGTFAIQMGKCQG-VRVFVTAGS--EEKLAVCKDLGADVCINYKTED--FVA-------RVKEETGGKGVDVIL  223 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g-~~V~~~~~~--~~~~~~~~~~g~~~~~~~~~~~--~~~-------~~~~~~~~~~~d~vi  223 (335)
                      .| -|.+|..+.+++...+ .+++++...  ......+...+.+......+..  +..       .+....  .+.|+|+
T Consensus         7 NG-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~--~~vDvVi   83 (171)
T d1cf2o1           7 NG-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML--DEADIVI   83 (171)
T ss_dssp             EC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH--HTCSEEE
T ss_pred             Ec-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh--cCCCEEE
Confidence            55 8999999999887665 577777643  2333444455554432111100  000       001111  2589999


Q ss_pred             eCCChhh-HHHhhccccCCCEEEEEeccC
Q 019790          224 DCMGASY-FQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       224 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      ||+|.-. ...+-..+..+-+.+..+...
T Consensus        84 EcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          84 DCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             ECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            9999843 445556677777777765443

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=86.03  E-value=0.46  Score=39.76  Aligned_cols=71  Identities=13%  Similarity=0.089  Sum_probs=44.3

Q ss_pred             EEEEeeccccccccccccchHHHHHHHHHhhCC-CeEEEEecChhhHHHHHHcCCCEEEeC--CC-ccHHHHHHHHhCCC
Q 019790          142 SFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINY--KT-EDFVARVKEETGGK  217 (335)
Q Consensus       142 ~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~--~~-~~~~~~~~~~~~~~  217 (335)
                      +|||          +||+|-+|..+++.+...| .+|+++++.........+...-..+..  .+ ..+.+.+.     .
T Consensus         2 KILI----------TG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~-----~   66 (342)
T d2blla1           2 RVLI----------LGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHV-----K   66 (342)
T ss_dssp             EEEE----------ETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHH-----H
T ss_pred             EEEE----------ECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHH-----h
Confidence            6899          9999999999998888888 589998865444333322211112222  22 22222222     2


Q ss_pred             cccEEEeCCC
Q 019790          218 GVDVILDCMG  227 (335)
Q Consensus       218 ~~d~vid~~g  227 (335)
                      ++|+||.+++
T Consensus        67 ~~d~Vih~a~   76 (342)
T d2blla1          67 KCDVVLPLVA   76 (342)
T ss_dssp             HCSEEEECBC
T ss_pred             CCCccccccc
Confidence            5899999776

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.99  E-value=0.51  Score=38.42  Aligned_cols=100  Identities=21%  Similarity=0.219  Sum_probs=56.8

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhC-----C--CeEEEEecChhhHHHHHHc-C-----CCEEEeCCCc
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQ-----G--VRVFVTAGSEEKLAVCKDL-G-----ADVCINYKTE  204 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~-----g--~~V~~~~~~~~~~~~~~~~-g-----~~~~~~~~~~  204 (335)
                      ++.-+||-          .|  ++.|..+..+++.+     +  .++++++.++...+.+++. .     ....++....
T Consensus        39 ~~~~~VLD----------iG--cG~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~  106 (280)
T d1jqea_          39 KSEIKILS----------IG--GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKE  106 (280)
T ss_dssp             CSEEEEEE----------ET--CTTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECS
T ss_pred             CCCCeEEE----------Ec--CCCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhh
Confidence            44446777          66  34455544444432     3  3678899898888877642 1     1122222222


Q ss_pred             cHH---HHHHHHhCCCcccEEEeCCC-----h--hhHHHhhccccCCCEEEEEec
Q 019790          205 DFV---ARVKEETGGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       205 ~~~---~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      .+.   ...........||+|+-.-.     .  ..+..+.+.|+|+|.++....
T Consensus       107 ~~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         107 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             CHHHHHHHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             hhhhhcchhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence            222   22222233467999986333     1  346778999999999877643

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=85.24  E-value=0.1  Score=42.29  Aligned_cols=94  Identities=15%  Similarity=0.099  Sum_probs=58.1

Q ss_pred             CCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH----cCCC-EE--EeCCCccHHHH
Q 019790          137 LSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VC--INYKTEDFVAR  209 (335)
Q Consensus       137 ~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~----~g~~-~~--~~~~~~~~~~~  209 (335)
                      +.++.+||=          .|  .+.|..+..+++.-..+|++++.+++.++.+++    .+.. .+  +..+...    
T Consensus        22 ~~~~~~VLD----------lG--CG~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~----   85 (252)
T d1ri5a_          22 TKRGDSVLD----------LG--CGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG----   85 (252)
T ss_dssp             CCTTCEEEE----------ET--CTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT----
T ss_pred             CCCcCEEEE----------ec--ccCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhh----
Confidence            468889988          76  344666777777644589999999998888863    2321 11  1111100    


Q ss_pred             HHHHhCCCcccEEEeCCChh-----------hHHHhhccccCCCEEEEE
Q 019790          210 VKEETGGKGVDVILDCMGAS-----------YFQRNLGSLNIDGRLFII  247 (335)
Q Consensus       210 ~~~~~~~~~~d~vid~~g~~-----------~~~~~~~~l~~~G~~v~~  247 (335)
                       .....++.||+|+-...-.           .+..+.+.|+++|.++..
T Consensus        86 -~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          86 -RHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             -SCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             -hcccccccceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence             0011234799997643321           235567889999998754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=85.11  E-value=0.5  Score=35.68  Aligned_cols=39  Identities=18%  Similarity=0.024  Sum_probs=33.9

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA  195 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~  195 (335)
                      +| .|.+|...+.-+...|.+|++.++++++.+.+.+.+.
T Consensus         7 IG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           7 VG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             EC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred             Ee-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence            55 8999999998888889999999999999988866543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=84.91  E-value=0.49  Score=37.74  Aligned_cols=34  Identities=32%  Similarity=0.184  Sum_probs=29.6

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .++|+|          .| .|+.|++++..+...|.+|+++++++
T Consensus         4 ~~kV~I----------iG-aG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAV----------VG-GSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEE----------EC-cCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            467888          88 69999999999999999999998753

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=84.85  E-value=0.58  Score=38.39  Aligned_cols=38  Identities=16%  Similarity=0.191  Sum_probs=32.7

Q ss_pred             CCCEEEEeeccccccccccccc--hHHHHHHHHHhhCCCeEEEEecChhh
Q 019790          139 PGESFLVDFCSISYSDVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEK  186 (335)
Q Consensus       139 ~~~~vli~~~~~~~~~~~g~~g--~~G~~a~~~a~~~g~~V~~~~~~~~~  186 (335)
                      +|.++||          +|+++  ++|.+.++.+...|++|++..+++..
T Consensus         7 ~gK~alV----------TGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFI----------AGIADDNGYGWAVAKSLAAAGAEILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEE----------ECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHH
T ss_pred             CCCEEEE----------ECCCCCchHHHHHHHHHHHCCCEEEEEeCchhh
Confidence            5788999          99765  89999999999999999999876543

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=84.70  E-value=0.81  Score=36.78  Aligned_cols=100  Identities=13%  Similarity=0.063  Sum_probs=63.7

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcC-CCEEEeCCCccHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVK  211 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~  211 (335)
                      ......++.++|=          .|  ++.|..+.+++.....+|++++.+++..+.+++.. .....+....+.    .
T Consensus        87 ~~l~~~~~~~vLD----------~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~----~  150 (254)
T d1xtpa_          87 ASLPGHGTSRALD----------CG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASM----E  150 (254)
T ss_dssp             HTSTTCCCSEEEE----------ET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCG----G
T ss_pred             hhCCCCCCCeEEE----------ec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccc----c
Confidence            3344556677887          76  56788888888877779999999999988887532 111111111111    1


Q ss_pred             HH-hCCCcccEEEeCCC-----hh----hHHHhhccccCCCEEEEEe
Q 019790          212 EE-TGGKGVDVILDCMG-----AS----YFQRNLGSLNIDGRLFIIG  248 (335)
Q Consensus       212 ~~-~~~~~~d~vid~~g-----~~----~~~~~~~~l~~~G~~v~~g  248 (335)
                      ++ .....||+|+-.-.     .+    .+..+.+.|+++|.++..-
T Consensus       151 ~~~~~~~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             GCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccCCCccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            11 12347999986332     22    2467788899999998754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.50  E-value=0.39  Score=36.49  Aligned_cols=35  Identities=9%  Similarity=0.029  Sum_probs=29.2

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEE  185 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~  185 (335)
                      +.+|+|          .| .|+.|+.++..+..+|+ .|+++.+++.
T Consensus         4 ~~kVaI----------IG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIAL----------LG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEE----------EC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEE----------EC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            467888          88 69999999999999998 5989887543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.39  E-value=1.2  Score=31.35  Aligned_cols=72  Identities=21%  Similarity=0.193  Sum_probs=47.5

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHH
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKE  212 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  212 (335)
                      ....-..+.+++|          .| .|.+|+-+++.+..+|.+|+++.+.+.-+      +     ..-+....+.+.+
T Consensus        23 ~~~~~~~~k~vvV----------iG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~l------~-----~~~d~~~~~~~~~   80 (123)
T d1nhpa2          23 QKTVDPEVNNVVV----------IG-SGYIGIEAAEAFAKAGKKVTVIDILDRPL------G-----VYLDKEFTDVLTE   80 (123)
T ss_dssp             HHHTCTTCCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEEESSSSTT------T-----TTCCHHHHHHHHH
T ss_pred             HHhhccCCCEEEE----------EC-ChHHHHHHHHHhhccceEEEEEEecCccc------c-----cccchhhHHHHHH
Confidence            3333345678888          77 69999999999999999999998764211      0     0112334455555


Q ss_pred             HhCCCcccEEEeCC
Q 019790          213 ETGGKGVDVILDCM  226 (335)
Q Consensus       213 ~~~~~~~d~vid~~  226 (335)
                      .....++++..++.
T Consensus        81 ~l~~~gv~~~~~~~   94 (123)
T d1nhpa2          81 EMEANNITIATGET   94 (123)
T ss_dssp             HHHTTTEEEEESCC
T ss_pred             HhhcCCeEEEeCce
Confidence            55556777777543

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.12  E-value=0.79  Score=38.23  Aligned_cols=28  Identities=14%  Similarity=0.116  Sum_probs=26.2

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecC
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGS  183 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~  183 (335)
                      +||+|-+|..++..+...|++|+++++.
T Consensus         7 TG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           7 TGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             ETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             ecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            9999999999999999999999999974

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=83.85  E-value=0.83  Score=31.70  Aligned_cols=79  Identities=15%  Similarity=0.193  Sum_probs=48.2

Q ss_pred             CCCC-CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHHcCCCEEE--eCCCccHHHHHHHH
Q 019790          137 LSPG-ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEE  213 (335)
Q Consensus       137 ~~~~-~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~  213 (335)
                      +.++ .+|.|          +| .|-+|.+.++-|+.+|.++++.+.+++.-  +... ++..+  ++++.+   .+.+.
T Consensus         7 ~~~~~~kigI----------lG-gGQL~rMla~aA~~lG~~v~v~d~~~~~P--A~~v-a~~~i~~~~~d~~---~l~~~   69 (111)
T d1kjqa2           7 LRPAATRVML----------LG-SGELGKEVAIECQRLGVEVIAVDRYADAP--AMHV-AHRSHVINMLDGD---ALRRV   69 (111)
T ss_dssp             TSTTCCEEEE----------ES-CSHHHHHHHHHHHTTTCEEEEEESSTTCG--GGGG-SSEEEECCTTCHH---HHHHH
T ss_pred             CCCCCCEEEE----------Ee-CCHHHHHHHHHHHHCCCEEEEEcCCCCCc--hhhc-CCeEEECCCCCHH---HHHHH
Confidence            3444 46999          88 69999999999999999999999765421  1122 23333  334432   23222


Q ss_pred             hCCCcccEE---EeCCChhhHH
Q 019790          214 TGGKGVDVI---LDCMGASYFQ  232 (335)
Q Consensus       214 ~~~~~~d~v---id~~g~~~~~  232 (335)
                      ......|+|   |+++..+.+.
T Consensus        70 ~~~~~~DviT~E~EnI~~~~L~   91 (111)
T d1kjqa2          70 VELEKPHYIVPEIEAIATDMLI   91 (111)
T ss_dssp             HHHHCCSEEEECSSCSCHHHHH
T ss_pred             HHhhCCceEEEEecCcCHHHHH
Confidence            211146777   5666665543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=83.78  E-value=0.062  Score=40.68  Aligned_cols=85  Identities=21%  Similarity=0.237  Sum_probs=53.3

Q ss_pred             ccccchHHHHHHHHHhhC-CCeEEEEecChhhHHHHHH---------cCCCEEEeCCCccHHHHHHHHhCCCcccEEEeC
Q 019790          156 HGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKD---------LGADVCINYKTEDFVARVKEETGGKGVDVILDC  225 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~-g~~V~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  225 (335)
                      +|++|-+|.++++.+... +++++.....+.....-.+         .+.. +.+....        .  ...+|+++|.
T Consensus        10 ~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~-~~~~~~~--------~--~~~~DViIDF   78 (162)
T d1diha1          10 AGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVT-VQSSLDA--------V--KDDFDVFIDF   78 (162)
T ss_dssp             TTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCC-EESCSTT--------T--TTSCSEEEEC
T ss_pred             ECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCce-eeccHHH--------H--hcccceEEEe
Confidence            898999999999988876 6787766533221110001         1111 1111111        1  1368999999


Q ss_pred             CChhhHHHhhccccCCCEEEEEeccC
Q 019790          226 MGASYFQRNLGSLNIDGRLFIIGTQG  251 (335)
Q Consensus       226 ~g~~~~~~~~~~l~~~G~~v~~g~~~  251 (335)
                      +..+.....++.....|.=+.+|..+
T Consensus        79 s~p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          79 TRPEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             ccHHHHHHHHHHHHhccceeEEecCC
Confidence            99888777777777777777787655

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=83.76  E-value=0.5  Score=38.18  Aligned_cols=34  Identities=24%  Similarity=0.159  Sum_probs=29.1

Q ss_pred             CCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          140 GESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       140 ~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      +.+|+|          +| +|+.|++++..+...|.+|+++++++
T Consensus         1 ~KkV~I----------IG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAV----------IG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEE----------EC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEE----------EC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            357888          87 79999999999999999999998653

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=83.67  E-value=2.4  Score=35.22  Aligned_cols=100  Identities=10%  Similarity=0.058  Sum_probs=58.2

Q ss_pred             cCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCC---CE-EEeCCCcc
Q 019790          135 SHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGA---DV-CINYKTED  205 (335)
Q Consensus       135 ~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~---~~-~~~~~~~~  205 (335)
                      ..+.+|.+||--         ..++|+.++   ..++ .|+ +|+.++.++...+.+++    .+.   .. ++..+..+
T Consensus       140 ~~~~~g~~VLdl---------f~~~G~~sl---~aa~-~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~  206 (317)
T d2b78a2         140 NGSAAGKTVLNL---------FSYTAAFSV---AAAM-GGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD  206 (317)
T ss_dssp             HTTTBTCEEEEE---------TCTTTHHHH---HHHH-TTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH
T ss_pred             HHhhCCCceeec---------CCCCcHHHH---HHHh-CCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH
Confidence            456789998872         234555554   3333 476 79999999887777653    222   12 23322222


Q ss_pred             HHHHHHHHhCCCcccEEEeCCC---h-------------hhHHHhhccccCCCEEEEEec
Q 019790          206 FVARVKEETGGKGVDVILDCMG---A-------------SYFQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       206 ~~~~~~~~~~~~~~d~vid~~g---~-------------~~~~~~~~~l~~~G~~v~~g~  249 (335)
                      +.+...  ..+..||+||---+   .             +.+..+++.|+++|.++....
T Consensus       207 ~l~~~~--~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         207 YFKYAR--RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             HHHHHH--HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             HHHHHH--hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            222222  23457999984211   0             123567889999999987654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=83.64  E-value=0.93  Score=34.55  Aligned_cols=34  Identities=12%  Similarity=0.126  Sum_probs=29.5

Q ss_pred             ccccchHHHHHHHHHhhCCCeEEEEecChhhHHHH
Q 019790          156 HGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC  190 (335)
Q Consensus       156 ~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~  190 (335)
                      .| +|.+|...+.++-..|++|++.+++++..+.+
T Consensus        10 iG-aG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3          10 LG-AGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             EC-CHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             EC-cCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            88 69999999888888899999999998876554

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=83.61  E-value=4.3  Score=31.86  Aligned_cols=70  Identities=17%  Similarity=0.245  Sum_probs=51.7

Q ss_pred             CCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHH-HcCCCEEEeCCCccHHHHHHHHhCC
Q 019790          138 SPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGG  216 (335)
Q Consensus       138 ~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~  216 (335)
                      -.|.+|+|          .| .|.+|..+++++...|+++++++.+....+.+. ..+... ++. +..        . .
T Consensus        37 l~g~~v~I----------qG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-~~~-~~~--------~-~   94 (230)
T d1leha1          37 LEGLAVSV----------QG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-VAP-NAI--------Y-G   94 (230)
T ss_dssp             CTTCEEEE----------EC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-CCG-GGT--------T-T
T ss_pred             CCCCEEEE----------EC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-cCC-ccc--------c-c
Confidence            46789999          77 899999999999999999999998888877665 455532 221 111        1 2


Q ss_pred             CcccEEEeCCChh
Q 019790          217 KGVDVILDCMGAS  229 (335)
Q Consensus       217 ~~~d~vid~~g~~  229 (335)
                      .+.|+++=|+-..
T Consensus        95 ~~cDIl~PcA~~~  107 (230)
T d1leha1          95 VTCDIFAPCALGA  107 (230)
T ss_dssp             CCCSEEEECSCSC
T ss_pred             ccccEeccccccc
Confidence            3689998877654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.07  E-value=0.63  Score=35.98  Aligned_cols=68  Identities=12%  Similarity=0.192  Sum_probs=43.3

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCC--eEEEEecChhhHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCc
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG  218 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  218 (335)
                      .+|||          +||+|-+|..++..+...|.  +|++..|++..        ...-+.....++.+. .+.. ...
T Consensus         3 KkIlI----------tGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~~~~~d~~~~-~~~~-~~~   62 (212)
T d2a35a1           3 KRVLL----------AGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAEL-LPQL-DGS   62 (212)
T ss_dssp             CEEEE----------ECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHH-GGGC-CSC
T ss_pred             CEEEE----------ECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hcccccccccchhhh-hhcc-ccc
Confidence            58999          99999999999999888886  67766654311        100122222333332 2322 236


Q ss_pred             ccEEEeCCCh
Q 019790          219 VDVILDCMGA  228 (335)
Q Consensus       219 ~d~vid~~g~  228 (335)
                      .|.|+.|+|.
T Consensus        63 ~d~vi~~~g~   72 (212)
T d2a35a1          63 IDTAFCCLGT   72 (212)
T ss_dssp             CSEEEECCCC
T ss_pred             hheeeeeeee
Confidence            8999999874

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.00  E-value=0.34  Score=38.81  Aligned_cols=45  Identities=7%  Similarity=0.009  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecChhhHHHHHH
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD  192 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~~~~~~~~~  192 (335)
                      ...+|.+||=          .| +| .|..+..+++..+.+|++++-++...+.+++
T Consensus        48 ~~~~g~~vLD----------lG-cG-~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLID----------IG-SG-PTIYQVLAACDSFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEE----------SS-CT-TCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEE----------EC-CC-CCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence            3456777777          76 34 3555555555544489999999998888764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=81.69  E-value=5.9  Score=31.93  Aligned_cols=105  Identities=17%  Similarity=0.281  Sum_probs=67.0

Q ss_pred             HhcCCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEEeCCCccH---
Q 019790          133 MTSHLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYKTEDF---  206 (335)
Q Consensus       133 ~~~~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~---  206 (335)
                      +...+.++..|+.           ..+|..|++++..++.+|.+++++..   ++.+.+.++.+|+..++...+.++   
T Consensus        53 ~~g~~~~~~~vv~-----------aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a  121 (292)
T d2bhsa1          53 KRGEIKPGDVLIE-----------ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGA  121 (292)
T ss_dssp             HTTSCCTTSEEEE-----------ECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHH
T ss_pred             HhCCcCCCceeee-----------ecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHH
Confidence            3344555655544           45899999999999999998766654   566777788888865442221111   


Q ss_pred             --------------------------------HHHHHHHhCCCcccEEEeCCChhh----HHHhhccccCCCEEEEEec
Q 019790          207 --------------------------------VARVKEETGGKGVDVILDCMGASY----FQRNLGSLNIDGRLFIIGT  249 (335)
Q Consensus       207 --------------------------------~~~~~~~~~~~~~d~vid~~g~~~----~~~~~~~l~~~G~~v~~g~  249 (335)
                                                      ..++.+..++ .+|.++-++|+.-    +...++.+.+..+++.+..
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~-~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         122 RDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGG-RITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             HHHHHHHHHHTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTT-CCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             HHHHhhccccccccccCCCchhcchhhHHHHHHHHhHHhcCC-CCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                                            1223233333 5899998887632    3455677778888876643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.52  E-value=0.81  Score=37.70  Aligned_cols=34  Identities=24%  Similarity=0.226  Sum_probs=30.3

Q ss_pred             CEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEecCh
Q 019790          141 ESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE  184 (335)
Q Consensus       141 ~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~~~  184 (335)
                      .+|||          +||+|-+|..++..+...|++|+++++..
T Consensus         1 k~vLI----------tG~tGfiG~~l~~~Ll~~g~~V~~~~r~~   34 (321)
T d1rpna_           1 RSALV----------TGITGQDGAYLAKLLLEKGYRVHGLVARR   34 (321)
T ss_dssp             CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEE----------ECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence            37899          99999999999999988899999998743

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=80.81  E-value=3.2  Score=35.34  Aligned_cols=54  Identities=22%  Similarity=0.192  Sum_probs=41.0

Q ss_pred             CCCCCCEEEEeeccccccccccccchHHHHHHHHHhhCCCeEEEEec---ChhhHHHHHHcCCCEEEe
Q 019790          136 HLSPGESFLVDFCSISYSDVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCIN  200 (335)
Q Consensus       136 ~~~~~~~vli~~~~~~~~~~~g~~g~~G~~a~~~a~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~  200 (335)
                      +++++..|+-           ..+|..|.+++.+++.+|.+++++..   ++.+.+.++.+|++.+..
T Consensus       140 ~~~~g~~VVe-----------aSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVAD-----------ATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEE-----------ECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEE-----------eCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            4667765544           45799999999999999998777764   556777788899876653

>d2ifta1 c.66.1.46 (A:11-193) Putative methylase HI0767 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase HI0767
species: Haemophilus influenzae [TaxId: 727]

Probab=80.65  E-value=0.72  Score=35.09  Aligned_cols=64  Identities=16%  Similarity=0.128  Sum_probs=39.4

Q ss_pred             cccccchHHHHHHHHHhhCCC-eEEEEecChhhHHHHHH----cCC---CEEEeCCCccHHHHHHHHhCCCcccEEEe
Q 019790          155 VHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGA---DVCINYKTEDFVARVKEETGGKGVDVILD  224 (335)
Q Consensus       155 ~~g~~g~~G~~a~~~a~~~g~-~V~~~~~~~~~~~~~~~----~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vid  224 (335)
                      +.+|+|.+|+-|+    .+|+ +|+.++.+.+..+.+++    ++.   ...+..  .+....++.......||+||-
T Consensus        50 lFaGsG~~glEal----SRGA~~v~fVE~~~~a~~~ik~Ni~~l~~~~~~~~~~~--~d~~~~l~~~~~~~~fDlIFl  121 (183)
T d2ifta1          50 GFAGSGSLGFEAL----SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN--QSSLDFLKQPQNQPHFDVVFL  121 (183)
T ss_dssp             TTCTTCHHHHHHH----HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC--SCHHHHTTSCCSSCCEEEEEE
T ss_pred             cccCccceeeeee----eecceeeEEeecccchhhhHhhHHhhhccccccccccc--ccccccccccccCCcccEEEe
Confidence            3678999998655    5688 89999998887766653    443   222222  222233333333446999985