Citrus Sinensis ID: 019805

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
MEDPASSATADNPPNSVMWYSVLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRSP
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEcccccEEEEccHHHHHHHHHHccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHccccccccc
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEccHHHcccccHHHHHHHHHHcccEEEEEcccccEEEEccHHHHHHHHHHccHHHcccccHHHHHHHEcccccEEEccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEcHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccHHcHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccc
medpassatadnppnsvMWYSVLAFFLPVLLLLFHRHFsrnklnylpppgpkpwplignlnllgehlHLSFHSLsqkygplmqlkLGLNIMVVCSSAEVAELFLKThdltfatrpeilagkhanydylvmpgapygphlrqTRKIYKtellspkrlAQFEYMRVEERKAFMCKLYklssssystpvhlkeCVFMFNLAIMSRMLfgkryteenennvvtpkELTEIVEEVFFLSGvldiggaipwLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERhgkrkfkergtnDMVDVLLQladdptlevKLERDQEIILRHRCRIFyladlkprrsp
medpassatadnppnsVMWYSVLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYktellspkrlaQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVldeherhgkrkfkergtnDMVDVLlqladdptlevklerdqeiilrhrcrifyladlkprrsp
MEDPASSATADNPPNSVMWYSvlafflpvllllfHRHFSRNKLNYLpppgpkpwplignlnllgehlhlSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCklyklssssysTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRSP
****************VMWYSVLAFFLPVLLLLFHRHFSRN************WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLD***************NDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADL******
**********DNPPNSVMWYSVLAFFLPVLLLLF*******************WPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLY**********VHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLD*****************MVDVLLQLADD****VKLERDQEIILRHRCRIFYLA*LKP****
***********NPPNSVMWYSVLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRSP
**********DNPPNSVMWYSVLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHG*******GTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLK*****
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iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEDPASSATADNPPNSVMWYSVLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query335 2.2.26 [Sep-21-2011]
Q9SD85 513 Flavonoid 3'-monooxygenas yes no 0.797 0.520 0.359 2e-40
Q50EK4 525 Cytochrome P450 750A1 OS= N/A no 0.782 0.499 0.360 3e-38
Q9LXM3 500 Cytochrome P450 71B38 OS= no no 0.761 0.51 0.352 1e-36
O65784 498 Cytochrome P450 71B5 OS=A no no 0.755 0.508 0.337 4e-35
A6YIH8 502 Premnaspirodiene oxygenas N/A no 0.755 0.503 0.350 4e-35
Q1PS23 495 Amorpha-4,11-diene 12-mon N/A no 0.832 0.563 0.347 6e-35
Q9SZ46 524 Cytochrome P450 82C4 OS=A no no 0.901 0.576 0.318 2e-34
P37118 505 Cytochrome P450 71A2 OS=S N/A no 0.850 0.564 0.323 7e-34
O65786 504 Cytochrome P450 71B4 OS=A no no 0.785 0.521 0.338 1e-33
Q42798 509 Cytochrome P450 93A1 OS=G no no 0.853 0.561 0.328 1e-33
>sp|Q9SD85|F3PH_ARATH Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  166 bits (421), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 150/278 (53%), Gaps = 11/278 (3%)

Query: 22  VLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPL 81
           +LA  L ++L +F    +R+  N LPP GP PWP+IGNL  +G   H +  ++   YGP+
Sbjct: 9   LLATVLFLILRIFSHRRNRSHNNRLPP-GPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPI 67

Query: 82  MQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQ 141
           + L+LG   +VV +S  VAE FLK HD  FA+RP     KH  Y+Y  +  APYG   R 
Sbjct: 68  LHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRL 127

Query: 142 TRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMS 201
            RKI    L S K L  F+++R EE      +L ++ +     PV+L + V M  +  + 
Sbjct: 128 LRKISSVHLFSAKALEDFKHVRQEEVGTLTRELVRVGTK----PVNLGQLVNMCVVNALG 183

Query: 202 RMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAA 261
           R + G+R    + ++     E   +V E+  L+GV +IG  +P L +LDLQG   +MK  
Sbjct: 184 REMIGRRLFGADADH--KADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAGKMKRL 241

Query: 262 RKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQL 299
            K+ D F   +L EHE +G    +++   DM+  L+ L
Sbjct: 242 HKRFDAFLSSILKEHEMNG----QDQKHTDMLSTLISL 275
Catalyzes the 3'-hydroxylation of the flavonoid B-ring to the 3',4'-hydroxylated state. Convert naringenin to eriodictyol and dihydrokaempferol to dihydroquercetin.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 2EC: 1
>sp|Q50EK4|C75A1_PINTA Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LXM3|C71BZ_ARATH Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2 Back     alignment and function description
>sp|O65784|C71B5_ARATH Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1 Back     alignment and function description
>sp|A6YIH8|C7D55_HYOMU Premnaspirodiene oxygenase OS=Hyoscyamus muticus GN=CYP71D55 PE=1 SV=1 Back     alignment and function description
>sp|Q1PS23|AMO_ARTAN Amorpha-4,11-diene 12-monooxygenase OS=Artemisia annua GN=CYP71AV1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SZ46|C82C4_ARATH Cytochrome P450 82C4 OS=Arabidopsis thaliana GN=CYP82C4 PE=2 SV=1 Back     alignment and function description
>sp|P37118|C71A2_SOLME Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1 Back     alignment and function description
>sp|O65786|C71B4_ARATH Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2 Back     alignment and function description
>sp|Q42798|C93A1_SOYBN Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query335
74273619 497 cytochrome P450 DDWF1 [Gossypium hirsutu 0.817 0.551 0.570 1e-81
225442104 511 PREDICTED: flavonoid 3'-monooxygenase-li 0.859 0.563 0.546 2e-80
297742991 477 unnamed protein product [Vitis vinifera] 0.859 0.603 0.546 3e-80
224147045418 cytochrome P450 [Populus trichocarpa] gi 0.856 0.686 0.528 2e-79
224119574 511 cytochrome P450 [Populus trichocarpa] gi 0.856 0.561 0.528 1e-78
224070800 512 cytochrome P450 [Populus trichocarpa] gi 0.853 0.558 0.531 1e-78
285028880 511 flavonoid 3' hydroxylase [Actinidia chin 0.788 0.516 0.514 2e-74
147826996 500 hypothetical protein VITISV_021888 [Viti 0.826 0.554 0.526 2e-74
255560607 511 flavonoid 3-hydroxylase, putative [Ricin 0.776 0.508 0.543 5e-74
225444716 508 PREDICTED: flavonoid 3'-monooxygenase [V 0.773 0.509 0.539 9e-74
>gi|74273619|gb|ABA01477.1| cytochrome P450 DDWF1 [Gossypium hirsutum] Back     alignment and taxonomy information
 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 161/282 (57%), Positives = 202/282 (71%), Gaps = 8/282 (2%)

Query: 31  LLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLGLNI 90
           +LL  R   R KLN+  PPGPKPWP+IGNL+L+G   H S H+LSQKYGPLMQLK G   
Sbjct: 6   ILLSLRFRPRRKLNF--PPGPKPWPVIGNLDLIGSLPHRSIHALSQKYGPLMQLKFGSFP 63

Query: 91  MVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTEL 150
           +VV SS E+A+ FLKTHD+ FA RP+I AG++  Y+Y  +  +PYGP+ RQ RK+  TEL
Sbjct: 64  VVVASSVEMAKAFLKTHDVIFAGRPKIAAGEYTTYNYSDITWSPYGPYWRQARKMCMTEL 123

Query: 151 LSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYT 210
            S KRL  +EY+R EE K  +  LY+    S   P+ LK+ +   +L ++SRM+FGK+YT
Sbjct: 124 FSAKRLESYEYIRREEMKLLLKGLYE----SSGVPIVLKDRLSDLSLNVISRMVFGKKYT 179

Query: 211 E-ENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFY 269
           E   EN +VTPKE  E+++E+F L+GVLDIG +IPWL FLDLQGN+KRMKA  KK DKF 
Sbjct: 180 EGTGENEIVTPKEFKEMLDELFLLNGVLDIGDSIPWLRFLDLQGNIKRMKALSKKFDKFL 239

Query: 270 EHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLER 311
           EHVLDEH    +R  K+    DMVDVLLQLADDP L+VKLER
Sbjct: 240 EHVLDEHNAR-RRDVKDYAAKDMVDVLLQLADDPNLDVKLER 280

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225442104|ref|XP_002273390.1| PREDICTED: flavonoid 3'-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742991|emb|CBI35858.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224147045|ref|XP_002336393.1| cytochrome P450 [Populus trichocarpa] gi|222834895|gb|EEE73344.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224119574|ref|XP_002331194.1| cytochrome P450 [Populus trichocarpa] gi|222873315|gb|EEF10446.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224070800|ref|XP_002303241.1| cytochrome P450 [Populus trichocarpa] gi|222840673|gb|EEE78220.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|285028880|gb|ADC34701.1| flavonoid 3' hydroxylase [Actinidia chinensis] Back     alignment and taxonomy information
>gi|147826996|emb|CAN77776.1| hypothetical protein VITISV_021888 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255560607|ref|XP_002521317.1| flavonoid 3-hydroxylase, putative [Ricinus communis] gi|223539395|gb|EEF40985.1| flavonoid 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225444716|ref|XP_002277926.1| PREDICTED: flavonoid 3'-monooxygenase [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query335
TAIR|locus:2035267 510 CYP703A2 ""cytochrome P450, fa 0.659 0.433 0.336 5.9e-28
TAIR|locus:2142878 513 TT7 "TRANSPARENT TESTA 7" [Ara 0.632 0.413 0.351 4.8e-27
TAIR|locus:2169434 507 CYP93D1 ""cytochrome P450, fam 0.704 0.465 0.329 2.8e-25
TAIR|locus:2116607 524 CYP82C4 ""cytochrome P450, fam 0.737 0.471 0.305 5.3e-25
TAIR|locus:2102003 498 CYP71B5 "cytochrome p450 71b5" 0.668 0.449 0.306 9.2e-25
TAIR|locus:2060025 514 CYP712A1 ""cytochrome P450, fa 0.698 0.455 0.307 1.4e-24
TAIR|locus:2132614 526 CYP706A2 ""cytochrome P450, fa 0.665 0.423 0.306 1.5e-24
TAIR|locus:2031900 502 CYP71B2 ""cytochrome P450, fam 0.722 0.482 0.308 1.6e-24
TAIR|locus:2116652 523 CYP82C2 ""cytochrome P450, fam 0.737 0.472 0.314 2.5e-24
TAIR|locus:2093531 501 CYP71B23 ""cytochrome P450, fa 0.629 0.421 0.340 4.4e-24
TAIR|locus:2035267 CYP703A2 ""cytochrome P450, family 703, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 316 (116.3 bits), Expect = 5.9e-28, P = 5.9e-28
 Identities = 78/232 (33%), Positives = 127/232 (54%)

Query:    73 SLSQKYGPLMQLKLGLNIMVVCSSAE--VAELFLKTHDLTFATRPEILAGKHANYDYLVM 130
             SL  KYGPL+ L+LG N+  + ++    + E+ L+  D+ F++RP+ LA  H  Y    +
Sbjct:    58 SLCDKYGPLVYLRLG-NVDAITTNDPDTIREILLRQDDV-FSSRPKTLAAVHLAYGCGDV 115

Query:   131 PGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCXXXXXXXXXXXTPVHLKE 190
               AP GPH ++ R+I    LL+ KRL  F   R EE +  +             P++LKE
Sbjct:   116 ALAPMGPHWKRMRRICMEHLLTTKRLESFTTQRAEEARYLI--RDVFKRSETGKPINLKE 173

Query:   191 CVFMFNLAIMSRMLFGKRYTEENENNVVTPKELTE---IVEEVFFLSGVLDIGGAIPWLA 247
              +  F++  ++RML GK++      ++V+PKE  E   I  ++F+L GV+ +G  +P+  
Sbjct:   174 VLGAFSMNNVTRMLLGKQFF--GPGSLVSPKEAQEFLHITHKLFWLLGVIYLGDYLPFWR 231

Query:   248 FLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQL 299
             ++D  G  K M+   K++D+F+  ++DEH R       + G  D VDVLL L
Sbjct:   232 WVDPSGCEKEMRDVEKRVDEFHTKIIDEHRRAKLEDEDKNGDMDFVDVLLSL 283
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0010584 "pollen exine formation" evidence=RCA;IMP
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010208 "pollen wall assembly" evidence=IMP
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
GO:0051791 "medium-chain fatty acid metabolic process" evidence=IDA
GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=IDA
GO:0080110 "sporopollenin biosynthetic process" evidence=IMP;TAS
TAIR|locus:2142878 TT7 "TRANSPARENT TESTA 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169434 CYP93D1 ""cytochrome P450, family 93, subfamily D, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116607 CYP82C4 ""cytochrome P450, family 82, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102003 CYP71B5 "cytochrome p450 71b5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060025 CYP712A1 ""cytochrome P450, family 712, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132614 CYP706A2 ""cytochrome P450, family 706, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031900 CYP71B2 ""cytochrome P450, family 71, subfamily B, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116652 CYP82C2 ""cytochrome P450, family 82, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093531 CYP71B23 ""cytochrome P450, family 71, subfamily B, polypeptide 23"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CYP92A17v1
cytochrome P450 (512 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP715A2-2
cytochrome P450 (359 aa)
  •     0.402

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query335
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 2e-53
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 2e-53
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 4e-45
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-40
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 6e-34
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 3e-29
pfam00067 461 pfam00067, p450, Cytochrome P450 2e-22
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 7e-19
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 3e-18
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 6e-15
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 5e-13
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 2e-08
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 2e-05
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information 
 Score =  183 bits (465), Expect = 2e-53
 Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 3/284 (1%)

Query: 16  SVMWYSVLAFFLPVLLLLFHRHFSRNKLNYLPPPGPKPWPLIGNLNLLGEHLHLSFHSLS 75
           S +   + +  +  +L+    + S  K   LPP GP  WP++GNL  LG   H    SL 
Sbjct: 3   SFLLSLLFSVLIFNVLIWRWLNASMRKSLRLPP-GPPRWPIVGNLLQLGPLPHRDLASLC 61

Query: 76  QKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPY 135
           +KYGPL+ L+LG    +     E+    L   D  FA+RP  LA  H  Y    +  AP 
Sbjct: 62  KKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPL 121

Query: 136 GPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMF 195
           GPH ++ R+I    LL+ KRL  F   R EE +  + +     ++    PV+L+E +  F
Sbjct: 122 GPHWKRMRRICMEHLLTTKRLESFAKHRAEEAR-HLIQ-DVWEAAQTGKPVNLREVLGAF 179

Query: 196 NLAIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNV 255
           ++  ++RML GK+Y            E   I  E+F L GV+ +G  +P   +LD  G  
Sbjct: 180 SMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCE 239

Query: 256 KRMKAARKKIDKFYEHVLDEHERHGKRKFKERGTNDMVDVLLQL 299
           K+M+   K++D+F++ ++DEH R    K       D VDVLL L
Sbjct: 240 KKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSL 283

Length = 514
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 335
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02966 502 cytochrome P450 83A1 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PTZ00404 482 cytochrome P450; Provisional 100.0
PLN00168 519 Cytochrome P450; Provisional 100.0
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
PLN02394 503 trans-cinnamate 4-monooxygenase 100.0
PLN02290 516 cytokinin trans-hydroxylase 100.0
PLN02655 466 ent-kaurene oxidase 100.0
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN03018 534 homomethionine N-hydroxylase 100.0
PLN02500 490 cytochrome P450 90B1 100.0
PLN02196 463 abscisic acid 8'-hydroxylase 100.0
PLN02774 463 brassinosteroid-6-oxidase 100.0
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN03195 516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02302 490 ent-kaurenoic acid oxidase 100.0
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.98
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.98
PLN02738 633 carotene beta-ring hydroxylase 99.97
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.97
PLN02936 489 epsilon-ring hydroxylase 99.97
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.95
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.9
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.9
PLN02648 480 allene oxide synthase 99.9
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-44  Score=310.08  Aligned_cols=280  Identities=38%  Similarity=0.525  Sum_probs=241.1

Q ss_pred             cCCCCCCCCCCCCCcccccccccCcc-hhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCc-hh
Q 019805           41 NKLNYLPPPGPKPWPLIGNLNLLGEH-LHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPE-IL  118 (335)
Q Consensus        41 ~~~~~~~ppgp~~~p~~g~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~  118 (335)
                      .+++.+.||||+++|++||++++... ++..+++++++|||||.+|+|..++|||+++++++|++.+++..|++||. ..
T Consensus        21 ~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   21 YRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             ccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            33348899999999999999999655 99999999999999999999999999999999999999999999999997 33


Q ss_pred             hhcccccCCccccccCCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHH
Q 019805          119 AGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLA  198 (335)
Q Consensus       119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~  198 (335)
                      ....+.+++.|+++++||+.|+.+||+....+|+.+.++.......++++.+++.+.+ ..  ++++||+.+.+..++.+
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~--~~~~vdl~~~l~~~~~n  177 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK--KGEPVDLSELLDLLVGN  177 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC--CCceeeHHHHHHHHHHH
Confidence            4566666889999998899999999999988899999999888889999999999987 22  33899999999999999


Q ss_pred             HHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccc-ccccc-ccccHHHHHHHHHHHHHHHHHHHHHHH
Q 019805          199 IMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIP-WLAFL-DLQGNVKRMKAARKKIDKFYEHVLDEH  276 (335)
Q Consensus       199 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~  276 (335)
                      ||++++||.++...++   +...++.+.+.+.....+.....+++| +++++ +..+..++......++.++++++|+++
T Consensus       178 vI~~~~fG~rf~~~~~---~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh  254 (489)
T KOG0156|consen  178 VICRMLFGRRFEEEDE---EEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEH  254 (489)
T ss_pred             HHHHHHhCCccccCCc---hHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998532   255668999999999988888888999 67777 345677788888888999999999999


Q ss_pred             HHcccccccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805          277 ERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS  334 (335)
Q Consensus       277 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s  334 (335)
                      ++.. .  + ++..|++|.||+..++++... +++++|..+|.   .+++||.||||+
T Consensus       255 ~~~~-~--~-~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~---dl~~AGtdTta~  304 (489)
T KOG0156|consen  255 REKI-G--D-EEGRDFVDALLKLMKEEKAEG-LTDDHLKALIL---DLFLAGTDTTAT  304 (489)
T ss_pred             Hhhh-c--c-CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHH---HHHhcccchHHH
Confidence            8875 2  2 223899999999877644222 99999999777   999999999975

>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query335
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 7e-55
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 4e-54
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 7e-42
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 2e-37
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 7e-35
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 4e-31
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 6e-31
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 8e-30
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 2e-28
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 4e-25
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 9e-24
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 5e-23
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 3e-21
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 8e-21
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-20
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-20
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 2e-20
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 5e-20
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-15
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 2e-15
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 2e-15
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 1e-14
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 2e-13
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 4e-11
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
 Score =  185 bits (471), Expect = 7e-55
 Identities = 37/290 (12%), Positives = 75/290 (25%), Gaps = 34/290 (11%)

Query: 29  VLLLLFHRHFSRNKLNYLPPPGPKPW-PLIGNLNLLGEHLHLSFHSLSQKYGPLMQLKLG 87
              +L+ R   R       PP  K   P +G+    G+        + +K+G +  ++  
Sbjct: 5   TSSVLYGRRTRRRNE----PPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAA 60

Query: 88  LNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYK 147
              + V   +   +  L        +  +    +        M    + P   + R    
Sbjct: 61  GLYITVLLDSNCYDAVLSDVA----SLDQTSYAQVLMKRIFNMILPSHNPESEKKRAEM- 115

Query: 148 TELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGK 207
                   L Q         +  M              +   E        +   +LF  
Sbjct: 116 --HFQGASLTQLSNSMQNNLRLLMTPSEMG--------LKTSEWKKDGLFNLCYSLLFKT 165

Query: 208 RYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDK 267
            Y             LT+I EE             +P LA   +    K  K       +
Sbjct: 166 GYLTVFGAENNNSAALTQIYEEFR------RFDKLLPKLARTTVN---KEEKQIASAARE 216

Query: 268 FYEHVLDEHERHGKRKFKERGTNDMVDVLLQLADDPTLEVKLERDQEIIL 317
                L       K +         +   ++   D  ++ +++R   ++ 
Sbjct: 217 KLWKWLTPSGLDRKPR-----EQSWLGSYVKQLQDEGIDAEMQRRAMLLQ 261
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query335
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.97
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.97
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.97
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.96
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.96
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.96
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.96
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.96
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.96
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.95
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.95
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.95
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.95
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.94
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.94
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.94
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.94
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.94
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.94
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.94
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.94
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.94
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.94
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.94
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.94
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.93
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.93
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.93
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.93
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.93
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.93
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.93
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.93
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.93
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.93
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.93
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.92
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.92
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.92
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.92
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.92
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.91
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.91
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.91
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.91
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.9
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.9
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.9
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.88
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.88
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.87
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.87
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.86
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.85
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.85
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.82
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 98.33
2diu_A96 KIAA0430 protein; structural genomics, RRM domain, 82.93
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=3e-38  Score=279.66  Aligned_cols=276  Identities=18%  Similarity=0.268  Sum_probs=213.8

Q ss_pred             CCCCCCCCCCCCCcccccccccC--cchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhh
Q 019805           42 KLNYLPPPGPKPWPLIGNLNLLG--EHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILA  119 (335)
Q Consensus        42 ~~~~~~ppgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~  119 (335)
                      ++..+.||||+++|++||+..+.  +.++..+.+|+++|||||++++|+.++|+|+||+++++++.+++..|.+|+....
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            34567899999999999999883  4678899999999999999999999999999999999999998888988887655


Q ss_pred             hcccccCCccccccCCChhHHHHHHHHHHhhcCh--hHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHH
Q 019805          120 GKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSP--KRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNL  197 (335)
Q Consensus       120 ~~~~~~~~~~~~~~~~g~~w~~~R~~l~~~~f~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~  197 (335)
                      ......++.|++++++|+.|+.+||++. +.|+.  ..+..+.+.+.++++.+++.+.+.    +++++|+.+.+..+++
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~----~~~~vd~~~~~~~~t~  158 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATH----NGQSIDISFPVFVAVT  158 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT----TTEEECCHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHc----CCCcccHHHHHHHHHH
Confidence            5555545678888877999999999999 88874  456788999999999999999864    5688999999999999


Q ss_pred             HHHHHHHhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019805          198 AIMSRMLFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHE  277 (335)
Q Consensus       198 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  277 (335)
                      |+|+.++||.+++..+    +....+....+.+........+..++||+++++. ...+++.+..+.+.++++.++++++
T Consensus       159 dvi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~  233 (494)
T 3swz_A          159 NVISLICFNTSYKNGD----PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYK  233 (494)
T ss_dssp             HHHHHHHHSCCCCTTC----THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCcCCCCC----HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999887544    2333344444444444444456678899887742 3456677788888899999998887


Q ss_pred             HcccccccCCCCCcHHHHHHhccCCC--------CcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805          278 RHGKRKFKERGTNDMVDVLLQLADDP--------TLEVKLERDQEIILRHRCRIFYLADLKPRRS  334 (335)
Q Consensus       278 ~~~~~~~~~~~~~d~l~~ll~~~~~~--------~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s  334 (335)
                      +..    +.....|+++.|++...+.        .....++++++.+   ++.++++||+|||++
T Consensus       234 ~~~----~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~---~~~~~~~AG~dTta~  291 (494)
T 3swz_A          234 EKF----RSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILT---TIGDIFGAGVETTTS  291 (494)
T ss_dssp             TTC----CTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred             Hhh----cccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHH---HHHHHhhcchhHHHH
Confidence            655    2345679999999764211        1124599999999   555999999999974
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 335
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 3e-29
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-29
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 7e-25
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 2e-24
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 1e-22
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 1e-18
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 6e-10
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 1e-06
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 2e-04
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Vitamin D 25-hydroxylase Cyp2R1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 3e-29
 Identities = 55/281 (19%), Positives = 101/281 (35%), Gaps = 10/281 (3%)

Query: 48  PPGPKPWPLIGNLNLLG---EHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFL 104
           PPGP   P IGN+  L    E  H+     SQ YG +  L LG    VV +  +V +  L
Sbjct: 1   PPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECL 60

Query: 105 KTHDLTFATRPEILAGKHANYDYLVMPGAPYGPHLRQTRKIYKTELLSPKRLAQFEYMRV 164
                 FA RP +           ++  + YG      R++            +    ++
Sbjct: 61  VHQSEIFADRPCLPLFMKMTKMGGLL-NSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKI 119

Query: 165 EERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRMLFGKRYTEENENNVVTPKELT 224
            E   F     +        P   K+ +      I + ++FG+R+T E+ +     +  +
Sbjct: 120 LEETKFFNDAIETYKGR---PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFS 176

Query: 225 EIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRKF 284
           E VE     S  L    A PW+  L    + +++      +  F   ++++   + K + 
Sbjct: 177 ENVELAASASVFL--YNAFPWIGILPFGKH-QQLFRNAAVVYDFLSRLIEKASVNRKPQL 233

Query: 285 KERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFY 325
            +   +  +D + Q  +DP+     E     +         
Sbjct: 234 PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTE 274
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query335
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.98
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.97
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.97
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.95
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.91
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.89
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.88
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.87
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.86
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.85
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.84
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.79
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.73
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.73
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.72
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.72
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.57
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.42
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=7e-36  Score=259.66  Aligned_cols=267  Identities=13%  Similarity=0.140  Sum_probs=202.1

Q ss_pred             CCCCCCCCCccccccccc-CcchhHHHHHHHHhhCCceEEecCCeeEEEeCCHHHHHHHHHhcCCccCCCCchhhhcccc
Q 019805           46 LPPPGPKPWPLIGNLNLL-GEHLHLSFHSLSQKYGPLMQLKLGLNIMVVCSSAEVAELFLKTHDLTFATRPEILAGKHAN  124 (335)
Q Consensus        46 ~~ppgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~  124 (335)
                      |.+|||+++|++||+..+ ..+++.++.+++++|||||++++|+.++|+|+||+++++++.++...+..+........+.
T Consensus         1 r~iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~   80 (453)
T d2ij2a1           1 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA   80 (453)
T ss_dssp             CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH
T ss_pred             CCCccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhc
Confidence            468999999999999988 6678999999999999999999999999999999999999987665554443332222222


Q ss_pred             cCCcccccc-CCChhHHHHHHHHHHhhcChhHHHhhHHHHHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHH
Q 019805          125 YDYLVMPGA-PYGPHLRQTRKIYKTELLSPKRLAQFEYMRVEERKAFMCKLYKLSSSSYSTPVHLKECVFMFNLAIMSRM  203 (335)
Q Consensus       125 ~~~~~~~~~-~~g~~w~~~R~~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~vi~~~  203 (335)
                        |+|+++. .+|+.|+++|+++. +.|++++++.+.+.+.++++++++.|.+..   +++++|+.+.+.++++|+++.+
T Consensus        81 --g~~~~~~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~i~~~~~~li~~l~~~~---~~~~idl~~~~~~~~~~~i~~~  154 (453)
T d2ij2a1          81 --GDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLN---ADEHIEVPEDMTRLTLDTIGLC  154 (453)
T ss_dssp             --TTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCC---TTCCEEHHHHHHHHHHHHHHHH
T ss_pred             --CCcEEecCCChHHHHHHHHHHH-HHhhhhhhhhhhhhHHHHHHHHHHHhhhcC---CCCccchHHHHHHHhhhcchhc
Confidence              4566653 35999999999999 999999999999999999999999997642   5789999999999999999999


Q ss_pred             HhcccccCCCcCCCCChHHHHHHHHHHHHhhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Q 019805          204 LFGKRYTEENENNVVTPKELTEIVEEVFFLSGVLDIGGAIPWLAFLDLQGNVKRMKAARKKIDKFYEHVLDEHERHGKRK  283 (335)
Q Consensus       204 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  283 (335)
                      +||.+++.....  .....+.+...........  +....|+...+  ....+++.++.+.++++++++|+++++..   
T Consensus       155 ~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---  225 (453)
T d2ij2a1         155 GFNYRFNSFYRD--QPHPFITSMVRALDEAMNK--LQRANPDDPAY--DENKRQFQEDIKVMNDLVDKIIADRKASG---  225 (453)
T ss_dssp             HHSCCCCGGGCS--SCCHHHHHHHHHHHHHHHT--C---CTTSGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             ccccccchhhhc--cchHHHHhhhhccchhhhh--hhhcccccccc--hhhHHHHHHHHHHHHHHHHHHHhhhcccc---
Confidence            999988654321  1112222222222222211  11223332222  34456777888899999999999887754   


Q ss_pred             ccCCCCCcHHHHHHhccCCCCcCCCCCHHHHHHHHHhhhhhhhccCCCCCC
Q 019805          284 FKERGTNDMVDVLLQLADDPTLEVKLERDQEIILRHRCRIFYLADLKPRRS  334 (335)
Q Consensus       284 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~~~~AG~ett~s  334 (335)
                         +...|+++.++++.+.+. +..++++++.+   +++++++||+|||++
T Consensus       226 ---~~~~d~l~~ll~~~~~~~-~~~ls~~ei~~---~~~~~l~ag~~tta~  269 (453)
T d2ij2a1         226 ---EQSDDLLTHMLNGKDPET-GEPLDDENIRY---QIITFLIAGHETTSG  269 (453)
T ss_dssp             ---CCCSSHHHHHHHCCCTTT-CCCCCHHHHHH---HHHHHHHHHHHHHHH
T ss_pred             ---ccccchhhhhhhhccccc-CcchhhhHHHh---hhccccccccccchh
Confidence               456899999998765532 35799999999   566999999999975
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure