Citrus Sinensis ID: 019908

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
Protein Sequence
MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Secondary Structure (PSIPRED)
ccccccccccccccEEEccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHcHHHHcccccccccccccccHHHHcccccccccccccccccccccccEEEEEEEcHHHHHccEEEEEEEccEEcccccccccccccccccccccccccEEEEEEEccccEEEEEccccccccccEEEEccccccccccccEEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEcccccEEEEEEcccccccccccccccccccEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHEccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHcHHHccccccccccccccccHHHHHHcccccccccccccccccccccEEEEEEEEHHHHHcccEEEEEEEcEEEccccccccccccccccccccccccEEEEEEccccccEEEEEccccccccccEEEccccccccccccEEEEEEEEEEEEEccccccccEEEEEcccccccccccccEEEEEEEcccccEEEccccEEEEEEEEHHHHHcccEEEEEcccccEEEEEccccEEEEccccccccEEEEEEEccEEEEEcc
Coil and Loop (DISEMBL)
mfgrtprrsnntkyYEILGVSKSATEDELKKAYRKAAMknhpdkggdpekFKELGQAYevlsdpekrdiyDQYGEDAlkegmggagaahnpfdifesffgggtfgaggssrgrrrkqgeDVVHTLKVSLEDLyngttkklslsrnilcpkckgkgsksgalgkcygcqgtgmkitTRQIGLGMIQQMQHVcpecrgageviserdkcpqckankvtqEKKVLEVHVEKGMQHGqkiafegqadeapdtitGDIVFILQLkehpkfkrkfddlYVDHTLSLTEALCGFQFAlthldgrqlliksnpgeiikpgiyfdnftsVNLYLHEYCFLWLM
Flexible Loop (DISEMBL)
mfgrtprrsnntkyyeilgvsksateDELKKAYRKAAmknhpdkggdpekFKELGQAYevlsdpekrDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAggssrgrrrkqgedVVHTLKVSledlyngttkklslsrnilcpkckgkgsksgalgkcygCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEViserdkcpqckankvtqekKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Low Complexity Region (SEG)
MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEsffgggtfgaggssrgrrrKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPkckgkgsksgalgkcYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Disordered region (IsUnstruct)
**************YEIL***************************************************Y**Y*********GGAGAAHNPFDIFESFFGGGTFG***************VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKAN*V****KVLEVHVE*******KIAFE*****APDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWL*
Disordered Region (DISOPRED)
*************YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYG*******************IFESFFG************************LKVSLEDLYNGTTKKLSLSRNILCPKCK**********KCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA*********DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Disordered Region (DISEMBL)
********SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGA*************DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Disordered Region (DISPRO)
*********NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAG*********QGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSVNLYLHEYCFLWLM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	334	2.2.26 [Sep-21-2011]
P42825	419	Chaperone protein dnaJ 2	yes	no	0.976	0.778	0.710	1e-129
Q04960	413	DnaJ protein homolog OS=C	N/A	no	0.946	0.765	0.754	1e-127
P42824	418	DnaJ protein homolog 2 OS	N/A	no	0.952	0.760	0.767	1e-127
P43644	417	DnaJ protein homolog ANJ1	N/A	no	0.976	0.781	0.715	1e-127
Q94AW8	420	Chaperone protein dnaJ 3	no	no	0.973	0.773	0.727	1e-126
Q03363	397	DnaJ protein homolog 1 (F	N/A	no	0.889	0.748	0.754	1e-118
Q2HJ94	412	DnaJ homolog subfamily A	yes	no	0.895	0.725	0.550	4e-89
Q9JMC3	397	DnaJ homolog subfamily A	yes	no	0.880	0.740	0.533	4e-85
P31689	397	DnaJ homolog subfamily A	yes	no	0.877	0.738	0.516	2e-84
Q5NVI9	396	DnaJ homolog subfamily A	yes	no	0.874	0.737	0.516	2e-84

>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2

 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/338 (71%), Positives = 274/338 (81%), Gaps = 12/338 (3%)

Query: 1   MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR P R+S+NTK+YEILGV K+A  ++LKKAY+KAA+KNHPDKGGDPEKFKEL QAYE
Sbjct: 1   MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGE 119
           VLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF SFFG G    G  SRGRR+++GE
Sbjct: 61  VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGE 120

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQI 179
           DVVH LKVSLED+Y GTTKKLSLSR  LC KC GKGSKSGA  KC GCQG+GMKI+ RQ 
Sbjct: 121 DVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQF 180

Query: 180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
           G GM+QQ+QH C +C+G GE I++RD+CPQCK  KV  EKKVLEV+VEKGMQH QKI F 
Sbjct: 181 GPGMMQQVQHACNDCKGTGETINDRDRCPQCKGEKVVSEKKVLEVNVEKGMQHNQKITFS 240

Query: 240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
           GQADEAPDT+TGDIVF++Q KEHPKFKRK +DL+V+HT+SLTEALCGFQF LTHLD RQL
Sbjct: 241 GQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQL 300

Query: 300 LIKSNPGEIIKPG-----------IYFDNFTSVNLYLH 326
           LIKS PGE++KP            IY   F    LY+H
Sbjct: 301 LIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIH 338

Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)

>sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1

 Score =  455 bits (1170), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/322 (75%), Positives = 281/322 (87%), Gaps = 6/322 (1%)

Query: 1   MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 60
           MFGR P++S+NTKYYEILGVSK+A++D+LKKAYRKAA+KNHPDKGGDPEKFKEL QAYEV
Sbjct: 1   MFGR-PKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 59

Query: 61  LSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGED 120
           LSDPEKR+IYDQYGEDALKEGMGG    H+PFDIF+SFFGG  FG GGSSRGRR+++GED
Sbjct: 60  LSDPEKREIYDQYGEDALKEGMGGG-GGHDPFDIFQSFFGGSPFGGGGSSRGRRQRRGED 118

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIG 180
           V+H LKVSLEDLYNGT+KKLSLSRN++C KCKGKGSKSGA  KC GCQG+GMK++ R +G
Sbjct: 119 VIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMKCPGCQGSGMKVSIRHLG 178

Query: 181 LGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEG 240
             MIQQMQH C EC+G GE I+++D+C QCK  KV QEKKVLEV VEKGMQ+ QKI F G
Sbjct: 179 PSMIQQMQHPCNECKGTGETINDKDRCSQCKGEKVVQEKKVLEVIVEKGMQNAQKITFPG 238

Query: 241 QADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLL 300
           +ADEAPDT+TGDIVF+LQ KEHPKFKRK DDL+V+HTLSL E+LCGFQF LTHLDGRQLL
Sbjct: 239 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLL 298

Query: 301 IKSNPGEIIKPGIYFDNFTSVN 322
           IKS PGE++KP    D F ++N
Sbjct: 299 IKSLPGEVVKP----DQFKAIN 316

Have a continuous role in plant development probably in the structural organization of compartments.

Cucumis sativus (taxid: 3659)

>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1

 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/322 (76%), Positives = 285/322 (88%), Gaps = 4/322 (1%)

Query: 1   MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 60
           MFGR P++S+NTKYYE+LGVSK+AT ++LKKAYRKAA+KNHPDKGGDPEKFKE+GQAYEV
Sbjct: 1   MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEV 60

Query: 61  LSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGED 120
           L+DPEKR+IYDQYGE+ LKEGMGG G  H+PFDIF+SFFGGG FG GGSSRGRR+++GED
Sbjct: 61  LNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGED 120

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIG 180
           VVH LKVSLEDLYNGT+KKLSLSRN+LC KCKGKGSKSGA   C  CQG+GMK++ RQ+G
Sbjct: 121 VVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLG 180

Query: 181 LGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEG 240
            GMIQQMQH C EC+G GE+IS++D+CPQCK  KV Q+KKVLEVHVEKGMQ+GQKI F G
Sbjct: 181 PGMIQQMQHPCNECKGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPG 240

Query: 241 QADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLL 300
           +ADEAPDT+TGDIVF+LQ KEHPKFKRK DDL+ +H+LSLTEALCGFQF LTHLD RQLL
Sbjct: 241 EADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLL 300

Query: 301 IKSNPGEIIKPGIYFDNFTSVN 322
           IKSNPGE+IKP    D F  +N
Sbjct: 301 IKSNPGEVIKP----DQFKGIN 318

Have a continuous role in plant development probably in the structural organization of compartments.

Allium porrum (taxid: 4681)

>sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/337 (71%), Positives = 279/337 (82%), Gaps = 11/337 (3%)

Query: 1   MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 60
           MFGR P++S++T+YYEILGV K A+ ++LKKAY+KAA+KNHPDKGGDPEKFKEL  AYEV
Sbjct: 1   MFGRAPKKSDSTRYYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEV 60

Query: 61  LSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGED 120
           LSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF+SFFGG  FG  GSSRGRR+++GED
Sbjct: 61  LSDPEKREIYDQYGEDALKEGMGGGGGMHDPFDIFQSFFGGSPFGGVGSSRGRRQRRGED 120

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIG 180
           VVH LKVSLEDL+ GTTKKLSLSRN++C KC GKGSKSGA  KC GCQGTGMK++ R +G
Sbjct: 121 VVHPLKVSLEDLFTGTTKKLSLSRNVICSKCTGKGSKSGASMKCSGCQGTGMKVSIRHLG 180

Query: 181 LGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEG 240
             MIQQMQH C EC+G GE I+++D+CPQCK  KV QEKKVLEV VEKGMQHGQKI F G
Sbjct: 181 PSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVVQEKKVLEVVVEKGMQHGQKITFPG 240

Query: 241 QADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLL 300
           +ADEAPDT+TGDIVF+LQ KEHPKFKRK +DL+ +HTLSLTEALCGF+F LTHLDGRQLL
Sbjct: 241 EADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLL 300

Query: 301 IKSNPGEIIKPG-----------IYFDNFTSVNLYLH 326
           IKSN GE++KP            IY   F    +Y+H
Sbjct: 301 IKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIH 337

Have a continuous role in plant development probably in the structural organization of compartments.

Atriplex nummularia (taxid: 3553)

>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2

 Score =  451 bits (1159), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/338 (72%), Positives = 280/338 (82%), Gaps = 13/338 (3%)

Query: 1   MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR P ++S+NTK+YEILGV KSA+ ++LKKAY+KAA+KNHPDKGGDPEKFKEL QAYE
Sbjct: 1   MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGE 119
           VLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF SFFGGG    G +SR RR+++GE
Sbjct: 61  VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGP-FGGNTSRQRRQRRGE 119

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQI 179
           DVVH LKVSLED+Y GT KKLSLSRN LC KC GKGSKSGA  KC GCQG+GMK++ RQ+
Sbjct: 120 DVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQL 179

Query: 180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
           G GMIQQMQH C EC+G GE I++RD+CPQCK +KV  EKKVLEV+VEKGMQH QKI FE
Sbjct: 180 GPGMIQQMQHACNECKGTGETINDRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFE 239

Query: 240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
           GQADEAPDT+TGDIVF+LQ KEHPKFKRK +DL+V+HTLSLTEALCGFQF LTHLDGR L
Sbjct: 240 GQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSL 299

Query: 300 LIKSNPGEIIKPG-----------IYFDNFTSVNLYLH 326
           LIKSNPGE++KP            IY   F    LY+H
Sbjct: 300 LIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIH 337

Have a continuous role in plant development probably in the structural organization of compartments.

Arabidopsis thaliana (taxid: 3702)

>sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1

 Score =  424 bits (1089), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/301 (75%), Positives = 265/301 (88%), Gaps = 4/301 (1%)

Query: 22  KSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG 81
           K+A+ D+LKKAYRKAA+KNHPDKGGDPEKFKEL QAY+VLSDPEKR+IYDQYGEDALKEG
Sbjct: 1   KNASPDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYDVLSDPEKREIYDQYGEDALKEG 60

Query: 82  MGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLS 141
           MGG G  H+PFDIF+SFFGGG FG GGSSRGRR+++GEDVVH LKVSLE+LYNGT+KKLS
Sbjct: 61  MGGGGGDHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLS 120

Query: 142 LSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI 201
           LSRN++C KC GKGSKSGA  +C  CQG+GMK++ RQ+G GMIQQMQH C +C+G GE+I
Sbjct: 121 LSRNVICSKCNGKGSKSGASMRCASCQGSGMKVSIRQLGPGMIQQMQHPCNDCKGTGEMI 180

Query: 202 SERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKE 261
           +++D+CP CK  KV QEKKVLEVHVEKGMQ+GQ+I F G+ADEAPDT+TGDIVF+LQ KE
Sbjct: 181 NDKDRCPLCKGEKVVQEKKVLEVHVEKGMQNGQRITFPGEADEAPDTVTGDIVFVLQQKE 240

Query: 262 HPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTSV 321
           HPKF+RK DDL+  HTLSLTEALCGFQF LTHLDGRQLLIKSNPGE++KP    D F ++
Sbjct: 241 HPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKP----DQFKAI 296

Query: 322 N 322
           N
Sbjct: 297 N 297

Have a continuous role in plant development probably in the structural organization of compartments.

Allium porrum (taxid: 4681)

>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1

 Score =  328 bits (840), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 168/305 (55%), Positives = 220/305 (72%), Gaps = 6/305 (1%)

Query: 11  NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
           +TK Y+ILGV   A+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR++
Sbjct: 6   DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKREL 65

Query: 70  YDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQG--EDVVHTLKV 127
           YD+YGE  L+EG GG G      DIF   FGGG F   G+    R  +   ED++H LKV
Sbjct: 66  YDRYGEQGLREGSGGGGGMD---DIFSHIFGGGLFSFMGNQSRSRNGRRRGEDMMHPLKV 122

Query: 128 SLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQM 187
           SLEDLYNG T KL LS+N+LC  C G+G KSGA+ KC  C+G G++I  RQ+  GM+QQM
Sbjct: 123 SLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQM 182

Query: 188 QHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPD 247
           Q VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP 
Sbjct: 183 QSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPG 242

Query: 248 TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGE 307
              GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG+
Sbjct: 243 VEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGK 302

Query: 308 IIKPG 312
           +I+PG
Sbjct: 303 VIEPG 307

Co-chaperone of Hsc70.

Bos taurus (taxid: 9913)

>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1

 Score =  315 bits (806), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 216/302 (71%), Gaps = 8/302 (2%)

Query: 12  TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDIY 70
           T+YY+ILGV  SA+ +E+KKAYRK A+K HPDK  D  EKFK + QAYEVLSDP+KRDIY
Sbjct: 5   TQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIY 64

Query: 71  DQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLE 130
           DQ GE A+KEG  G+ +  +P DIF+ FFGGG        R  R ++G++VVH L V+LE
Sbjct: 65  DQGGEQAIKEGGSGSPSFSSPMDIFDMFFGGG-------GRMTRERRGKNVVHQLSVTLE 117

Query: 131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHV 190
           DLYNG TKKL+L +N++C KC+G G K G++ KC  C+G GM++  +QIG GM+QQ+Q V
Sbjct: 118 DLYNGITKKLALQKNVICEKCEGIGGKKGSVEKCPLCKGRGMQVHIQQIGPGMVQQIQTV 177

Query: 191 CPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTIT 250
           C EC+G GE I+ +D+C  C   KVT+EKK++EVHVEKGM+ GQKI F G+ D+ P+   
Sbjct: 178 CIECKGQGERINPKDRCENCSGAKVTREKKIIEVHVEKGMKDGQKILFHGEGDQEPELDP 237

Query: 251 GDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIK 310
           GD++ +L  K+H  F+R+  DL +   + L+EALCGF+  +  LD R L+I S  GE+IK
Sbjct: 238 GDVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIK 297

Query: 311 PG 312
            G
Sbjct: 298 HG 299

Mus musculus (taxid: 10090)

>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2

 Score =  312 bits (800), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 156/302 (51%), Positives = 216/302 (71%), Gaps = 9/302 (2%)

Query: 12  TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEKFKELGQAYEVLSDPEKRDIY 70
           T YY++LGV  +AT++ELKKAYRK A+K HPDK   + EKFK++ QAYEVLSD +KR++Y
Sbjct: 5   TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELY 64

Query: 71  DQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLE 130
           D+ GE A+KEG  G     +P DIF+ FFGGG        R +R ++G++VVH L V+LE
Sbjct: 65  DKGGEQAIKEGGAGG-GFGSPMDIFDMFFGGG-------GRMQRERRGKNVVHQLSVTLE 116

Query: 131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHV 190
           DLYNG T+KL+L +N++C KC+G+G K GA+  C  C+GTGM+I   QIG GM+QQ+Q V
Sbjct: 117 DLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSV 176

Query: 191 CPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTIT 250
           C EC+G GE IS +D+C  C   K+ +EKK+LEVH++KGM+ GQKI F G+ D+ P    
Sbjct: 177 CMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEP 236

Query: 251 GDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIK 310
           GDI+ +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K
Sbjct: 237 GDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVK 296

Query: 311 PG 312
            G
Sbjct: 297 HG 298

Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.

Homo sapiens (taxid: 9606)

>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1

 Score =  312 bits (800), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 156/302 (51%), Positives = 216/302 (71%), Gaps = 10/302 (3%)

Query: 12  TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEKFKELGQAYEVLSDPEKRDIY 70
           T YY++LGV  +AT++ELKKAYRK A+K HPDK   + EKFK++ QAYEVLSD +KR++Y
Sbjct: 5   TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELY 64

Query: 71  DQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLE 130
           D+ GE A+KEG  G     +P DIF+ FFGGG        R +R ++G++VVH L V+LE
Sbjct: 65  DKGGEQAIKEGGAGG-GFGSPMDIFDMFFGGG--------RMQRERRGKNVVHQLSVTLE 115

Query: 131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHV 190
           DLYNG T+KL+L +N++C KC+G+G K GA+  C  C+GTGM+I   QIG GM+QQ+Q V
Sbjct: 116 DLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQIGPGMVQQIQSV 175

Query: 191 CPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTIT 250
           C EC+G GE IS +D+C  C   K+ +EKK+LEVH++KGM+ GQKI F G+ D+ P    
Sbjct: 176 CMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFHGEGDQEPGLEP 235

Query: 251 GDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIK 310
           GDI+ +L  K+H  F R+ +DL++   + L EALCGFQ  ++ LD R ++I S+PG+I+K
Sbjct: 236 GDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVK 295

Query: 311 PG 312
            G
Sbjct: 296 HG 297

Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
356504601	420	PREDICTED: chaperone protein dnaJ 2-like	0.940	0.747	0.847	1e-148
255647771	420	unknown [Glycine max]	0.940	0.747	0.844	1e-147
357512883	423	DnaJ protein-like protein [Medicago trun	0.931	0.735	0.825	1e-146
356520802	420	PREDICTED: chaperone protein dnaJ 2-like	0.940	0.747	0.838	1e-146
388521409	423	unknown [Medicago truncatula]	0.931	0.735	0.822	1e-146
217072316	423	unknown [Medicago truncatula]	0.931	0.735	0.822	1e-146
2370312	423	DnaJ-like protein [Medicago sativa] gi|3	0.931	0.735	0.819	1e-145
219363395	422	putative dnaJ chaperone family protein [	0.934	0.739	0.796	1e-143
242073922	418	hypothetical protein SORBIDRAFT_06g02452	0.931	0.744	0.791	1e-143
218191298	420	hypothetical protein OsI_08334 [Oryza sa	0.925	0.735	0.780	1e-143

>gi|356504601|ref|XP_003521084.1| PREDICTED: chaperone protein dnaJ 2-like [Glycine max]

 Score =  529 bits (1362), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/315 (84%), Positives = 297/315 (94%), Gaps = 1/315 (0%)

Query: 1   MFGRT-PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR  PRRS+N+KYY+ILG+SK+A+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGGPRRSDNSKYYDILGISKNASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGE 119
           VLSDPEK+++YDQYGEDALKEGMGG G+ HNPFDIFESFFGG +FG GGSSRGRR+K GE
Sbjct: 61  VLSDPEKKELYDQYGEDALKEGMGGGGSFHNPFDIFESFFGGASFGGGGSSRGRRQKHGE 120

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQI 179
           DVVH+LKVSLED+YNGTTKKLSLSRNILCPKCKGKGSKSG  G+C+GC+GTGMKIT RQI
Sbjct: 121 DVVHSLKVSLEDVYNGTTKKLSLSRNILCPKCKGKGSKSGTAGRCFGCKGTGMKITRRQI 180

Query: 180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
           GLGMIQQMQHVCP+CRG+GEVI+ERDKCP CK NKV+QEKKVLEVHVEKGMQ GQKI FE
Sbjct: 181 GLGMIQQMQHVCPDCRGSGEVINERDKCPLCKGNKVSQEKKVLEVHVEKGMQQGQKIVFE 240

Query: 240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
           GQADEAPDTITGDIVF+LQ+K+HPKF+R+ DDLY+DH LSLTEALCGFQFA+ HLDGRQL
Sbjct: 241 GQADEAPDTITGDIVFVLQVKDHPKFRREQDDLYIDHNLSLTEALCGFQFAVKHLDGRQL 300

Query: 300 LIKSNPGEIIKPGIY 314
           LIKSNPGE+IKPG Y
Sbjct: 301 LIKSNPGEVIKPGQY 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255647771|gb|ACU24346.1| unknown [Glycine max]

 Score =  527 bits (1357), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/315 (84%), Positives = 296/315 (93%), Gaps = 1/315 (0%)

Query: 1   MFGRT-PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR  PRRS+N+KYY+ILG+SK+A+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGGPRRSDNSKYYDILGISKNASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGE 119
           VLSDPEK+++YDQYGEDALKEGMGG G+ HNPFDIFESFFGG +FG GGSSRGRR+K GE
Sbjct: 61  VLSDPEKKELYDQYGEDALKEGMGGGGSFHNPFDIFESFFGGASFGGGGSSRGRRQKHGE 120

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQI 179
           DVVH+LKVSLED+YNGTTKKLSLSRNILCPKCKGKGSKSG  G+C+GC+GTGMKIT RQI
Sbjct: 121 DVVHSLKVSLEDVYNGTTKKLSLSRNILCPKCKGKGSKSGTAGRCFGCKGTGMKITRRQI 180

Query: 180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
           GLGMIQQMQHVCP+CRG+GEVI+ERDKCP CK NKV+QEKKVLEVHVEKGMQ GQKI FE
Sbjct: 181 GLGMIQQMQHVCPDCRGSGEVINERDKCPLCKGNKVSQEKKVLEVHVEKGMQQGQKIVFE 240

Query: 240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
           GQADEAPDTITGDIV +LQ+K+HPKF+R+ DDLY+DH LSLTEALCGFQFA+ HLDGRQL
Sbjct: 241 GQADEAPDTITGDIVLVLQVKDHPKFRREQDDLYIDHNLSLTEALCGFQFAVKHLDGRQL 300

Query: 300 LIKSNPGEIIKPGIY 314
           LIKSNPGE+IKPG Y
Sbjct: 301 LIKSNPGEVIKPGQY 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512883|ref|XP_003626730.1| DnaJ protein-like protein [Medicago truncatula] gi|355520752|gb|AET01206.1| DnaJ protein-like protein [Medicago truncatula]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/315 (82%), Positives = 290/315 (92%), Gaps = 4/315 (1%)

Query: 1   MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR P R+S+NTKYY+ILGVSKSA+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGG-AGAA-HNPFDIFESFFGGGTFGAGGSSRGRRRKQ 117
           VLSDPEK+++YDQYGEDALKEGMGG AG++ HNPFDIFESFFG G  G G  SR RR+KQ
Sbjct: 61  VLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFFGAGFGGGG-PSRARRQKQ 119

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTR 177
           GEDVVH++KVSLED+YNGTTKKLSLSRN LC KCKGKGSKSG  G+C+GCQGTGMKIT R
Sbjct: 120 GEDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRR 179

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
           QIGLGMIQQMQHVCP+C+G GEVISERD+CPQCK NK+TQEKKVLEVHVEKGMQ G KI 
Sbjct: 180 QIGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIV 239

Query: 238 FEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           FEGQADEAPDTITGDIVF+LQ+K HPKF+R+ DDL+++H LSLTEALCGFQF +THLDGR
Sbjct: 240 FEGQADEAPDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTEALCGFQFNVTHLDGR 299

Query: 298 QLLIKSNPGEIIKPG 312
           QLL+KSNPGE+IKPG
Sbjct: 300 QLLVKSNPGEVIKPG 314

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520802|ref|XP_003529049.1| PREDICTED: chaperone protein dnaJ 2-like [Glycine max]

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 264/315 (83%), Positives = 295/315 (93%), Gaps = 1/315 (0%)

Query: 1   MFGRT-PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR  PRRS+N+KYY+ILGVSK+A+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGGPRRSDNSKYYDILGVSKNASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGE 119
           VLSDPEK+D+YDQYGEDALKEGMGG G+ HNPFDIFESFFGG +FG GGSSRGRR+K GE
Sbjct: 61  VLSDPEKKDLYDQYGEDALKEGMGGGGSFHNPFDIFESFFGGASFGGGGSSRGRRQKHGE 120

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQI 179
           DVVH+LKVSLED+YNGTTKKLSLSRN+ C KCKGKGSKSG  G+C+GCQGTGMKIT RQI
Sbjct: 121 DVVHSLKVSLEDVYNGTTKKLSLSRNVFCSKCKGKGSKSGTAGRCFGCQGTGMKITRRQI 180

Query: 180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
           GLGMIQQMQHVCP+CRG+GEVI+ERDKCPQCK NK++QEKKVLEVHVEKGMQ GQKI FE
Sbjct: 181 GLGMIQQMQHVCPDCRGSGEVINERDKCPQCKGNKISQEKKVLEVHVEKGMQQGQKIVFE 240

Query: 240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
           GQADEAPDTITGDIVF+LQ+K+HP+F+R+ DDL++D  LSLTEALCGFQFA+ HLDGRQL
Sbjct: 241 GQADEAPDTITGDIVFVLQVKDHPRFRREQDDLFIDQNLSLTEALCGFQFAVKHLDGRQL 300

Query: 300 LIKSNPGEIIKPGIY 314
           LIKSNPGE+IKPG Y
Sbjct: 301 LIKSNPGEVIKPGQY 315

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521409|gb|AFK48766.1| unknown [Medicago truncatula]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/315 (82%), Positives = 289/315 (91%), Gaps = 4/315 (1%)

Query: 1   MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR P R+S+N KYY+ILGVSKSA+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGPTRKSDNAKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGG-AGAA-HNPFDIFESFFGGGTFGAGGSSRGRRRKQ 117
           VLSDPEK+++YDQYGEDALKEGMGG AG++ HNPFDIFESFFG G  G G  SR RR+KQ
Sbjct: 61  VLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFFGAGFGGGG-PSRARRQKQ 119

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTR 177
           GEDVVH++KVSLED+YNGTTKKLSLSRN LC KCKGKGSKSG  G+C+GCQGTGMKIT R
Sbjct: 120 GEDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRR 179

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
           QIGLGMIQQMQHVCP+C+G GEVISERD+CPQCK NK+TQEKKVLEVHVEKGMQ G KI 
Sbjct: 180 QIGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIV 239

Query: 238 FEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           FEGQADEAPDTITGDIVF+LQ+K HPKF+R+ DDL+++H LSLTEALCGFQF +THLDGR
Sbjct: 240 FEGQADEAPDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTEALCGFQFNVTHLDGR 299

Query: 298 QLLIKSNPGEIIKPG 312
           QLL+KSNPGE+IKPG
Sbjct: 300 QLLVKSNPGEVIKPG 314

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072316|gb|ACJ84518.1| unknown [Medicago truncatula]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/315 (82%), Positives = 290/315 (92%), Gaps = 4/315 (1%)

Query: 1   MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR P R+S+NTKYY+ILGVSKSA+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGG-AGAA-HNPFDIFESFFGGGTFGAGGSSRGRRRKQ 117
           VLSDPEK+++YDQYGEDALKEGMGG AG++ HNPFDIFESFFG G  G G  SR RR+KQ
Sbjct: 61  VLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFFGAGFGGGG-PSRARRQKQ 119

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTR 177
           GEDVVH++KVSLED+YNGTTKKLSLSRN LC KCKGKGSKSG  G+C+GCQGTGMKIT R
Sbjct: 120 GEDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRR 179

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
           QIGLGMIQQMQHVCP+C+G GEVISERD+CPQCK NK+TQEKKVLEVHVEKGMQ G KI 
Sbjct: 180 QIGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIV 239

Query: 238 FEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           FEG+ADEAPDTITGDIVF+LQ+K HPKF+R+ DDL+++H LSLTEALCGFQF +THLDGR
Sbjct: 240 FEGRADEAPDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTEALCGFQFNVTHLDGR 299

Query: 298 QLLIKSNPGEIIKPG 312
           QLL+KSNPGE+IKPG
Sbjct: 300 QLLVKSNPGEVIKPG 314

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2370312|emb|CAA04447.1| DnaJ-like protein [Medicago sativa] gi|3202020|gb|AAC19391.1| DnaJ-like protein MsJ1 [Medicago sativa]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 258/315 (81%), Positives = 289/315 (91%), Gaps = 4/315 (1%)

Query: 1   MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR P R+S+NTKYY+ILGVSKSA+EDE+KKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1   MFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGG-AGAA-HNPFDIFESFFGGGTFGAGGSSRGRRRKQ 117
           VLSDPEK+++YDQYGEDALKEGMGG AG++ HNPFDIFESFFG G  G G  SR RR+KQ
Sbjct: 61  VLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFFGAGFGGGG-PSRARRQKQ 119

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTR 177
           GEDVVH++KVSLED+YNGTTKKLSLSRN LC KCKGKGSKSG  G+C+GCQGTGMKIT R
Sbjct: 120 GEDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRR 179

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
           QIGLGMIQQMQHVCP+C+G GEVISERD+CPQCK NK+TQEKKVLEVHVEKGMQ G KI 
Sbjct: 180 QIGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIV 239

Query: 238 FEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           FEGQADE PDTITGDIVF+LQ+K HPKF+R+ DDL+++H LSLT+ALCGFQF +THLDGR
Sbjct: 240 FEGQADELPDTITGDIVFVLQVKGHPKFRRERDDLHIEHNLSLTDALCGFQFNVTHLDGR 299

Query: 298 QLLIKSNPGEIIKPG 312
           QLL+KSNPGE+IKPG
Sbjct: 300 QLLVKSNPGEVIKPG 314

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|219363395|ref|NP_001136581.1| putative dnaJ chaperone family protein [Zea mays] gi|194696264|gb|ACF82216.1| unknown [Zea mays] gi|413938083|gb|AFW72634.1| putative dnaJ chaperone family protein [Zea mays]

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/315 (79%), Positives = 285/315 (90%), Gaps = 3/315 (0%)

Query: 1   MFGRTPRRS-NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
           MFGR PR+S NNTKYYE+LGVSK+A++DELKKAYRKAA+KNHPDKGGDPEKFKEL QAY+
Sbjct: 1   MFGRMPRKSSNNTKYYEVLGVSKTASQDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYD 60

Query: 60  VLSDPEKRDIYDQYGEDALKEGMGGAGAA--HNPFDIFESFFGGGTFGAGGSSRGRRRKQ 117
           VLSDPEKR+IYDQYGEDALKEGMGG  ++  H+PFDIFE  F G +   GGSSRGRR+K+
Sbjct: 61  VLSDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDIFEQLFPGSSTFGGGSSRGRRQKR 120

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTR 177
           GEDVVHT+KVSL+DLYNGTTKKLSLSR+ LC KCKGKGSKSGA G C+GC+G GM+  TR
Sbjct: 121 GEDVVHTMKVSLDDLYNGTTKKLSLSRSALCSKCKGKGSKSGASGTCHGCRGAGMRTITR 180

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
           QIGLGMIQQM  VCPEC+G+GE+IS++DKCP CK NKV QEKKVLEVHVEKGMQH QKI 
Sbjct: 181 QIGLGMIQQMNTVCPECKGSGEIISDKDKCPSCKGNKVVQEKKVLEVHVEKGMQHNQKIV 240

Query: 238 FEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           F+GQADEAPDT+TGDIVF+LQLK+HPKFKR +DDLYV+HT+SLTEALCGFQF LTHLDGR
Sbjct: 241 FQGQADEAPDTVTGDIVFVLQLKDHPKFKRMYDDLYVEHTISLTEALCGFQFVLTHLDGR 300

Query: 298 QLLIKSNPGEIIKPG 312
           QLLIKS+PGE+IKPG
Sbjct: 301 QLLIKSDPGEVIKPG 315

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242073922|ref|XP_002446897.1| hypothetical protein SORBIDRAFT_06g024520 [Sorghum bicolor] gi|241938080|gb|EES11225.1| hypothetical protein SORBIDRAFT_06g024520 [Sorghum bicolor]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 247/312 (79%), Positives = 282/312 (90%), Gaps = 1/312 (0%)

Query: 1   MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 60
           MFGR PRRSNNTKYYE+LGVS +A++DELKKAYRKAA+K+HPDKGGDPEKFKEL QAYEV
Sbjct: 1   MFGRAPRRSNNTKYYEVLGVSNTASQDELKKAYRKAAIKSHPDKGGDPEKFKELSQAYEV 60

Query: 61  LSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGED 120
           LSDPEKR+IYDQYGED LKEGMGG    HNPFDIFE FFGGG FG   SSR RR+K+G+D
Sbjct: 61  LSDPEKREIYDQYGEDGLKEGMGGGSDYHNPFDIFEQFFGGGAFGGS-SSRVRRQKRGDD 119

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIG 180
           VVH+LKVSLED+YNG TK+LSLSRN+LC KCKGKG+ SGA G CYGC G GM+  TRQIG
Sbjct: 120 VVHSLKVSLEDVYNGATKRLSLSRNVLCSKCKGKGTMSGAPGTCYGCHGVGMRTITRQIG 179

Query: 181 LGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEG 240
           LGMIQQM  VCPECRG GE+ISERD+CP C+A+KV QE+KVLEVH+EKGMQHGQKI F+G
Sbjct: 180 LGMIQQMNTVCPECRGTGEIISERDRCPSCRASKVVQERKVLEVHIEKGMQHGQKIVFQG 239

Query: 241 QADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLL 300
           +AD+APDT+TGDIVF+LQ+KEHP+FKRK+DDL+++HT+SLTEALCGFQF LTHLDGRQLL
Sbjct: 240 EADQAPDTVTGDIVFVLQVKEHPRFKRKYDDLFIEHTISLTEALCGFQFILTHLDGRQLL 299

Query: 301 IKSNPGEIIKPG 312
           IKSNPGEII+PG
Sbjct: 300 IKSNPGEIIQPG 311

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218191298|gb|EEC73725.1| hypothetical protein OsI_08334 [Oryza sativa Indica Group]

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 245/314 (78%), Positives = 275/314 (87%), Gaps = 5/314 (1%)

Query: 1   MFGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 60
           M+GR P++SNNTKYYE+LGVSK+AT+DELKKAYRKAA+KNHPDKGGDPEKFKEL QAYEV
Sbjct: 1   MYGRMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60

Query: 61  LSDPEKRDIYDQYGEDALKEGMGGAGAA--HNPFDIFESFFGGGTFGAGGSSRGRRRKQG 118
           L+DPEKR+IYDQYGEDALKEGMGG  ++  H+PFD+FE  F       G   R +R   G
Sbjct: 61  LNDPEKREIYDQYGEDALKEGMGGGSSSDFHSPFDLFEQIFQNRGGFGGRGHRQKR---G 117

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQ 178
           EDVVHT+KVSLEDLYNGTTKKLSLSRN LC KCKGKGSKSGA   C+GC G GM+  TRQ
Sbjct: 118 EDVVHTMKVSLEDLYNGTTKKLSLSRNALCTKCKGKGSKSGAAATCHGCHGAGMRTITRQ 177

Query: 179 IGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAF 238
           IGLGMIQQM  VCPECRG+GE+IS++DKCP CK NKV QEKKVLEVHVEKGMQHGQKI F
Sbjct: 178 IGLGMIQQMNTVCPECRGSGEMISDKDKCPSCKGNKVVQEKKVLEVHVEKGMQHGQKIVF 237

Query: 239 EGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQ 298
           +G+ADEAPDT+TGDIVF+LQLK+HPKFKRKFDDL+ +HT+SLTEALCGFQF LTHLDGRQ
Sbjct: 238 QGEADEAPDTVTGDIVFVLQLKDHPKFKRKFDDLFTEHTISLTEALCGFQFVLTHLDGRQ 297

Query: 299 LLIKSNPGEIIKPG 312
           LLIKSNPGE+IKPG
Sbjct: 298 LLIKSNPGEVIKPG 311

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
TAIR|locus:2081378	420	J3 [Arabidopsis thaliana (taxi	0.937	0.745	0.692	6.2e-117
TAIR|locus:505006628	419	J2 "DNAJ homologue 2" [Arabido	0.940	0.749	0.673	8.2e-115
ZFIN|ZDB-GENE-030131-2884	413	dnaja2l "DnaJ (Hsp40) homolog,	0.904	0.731	0.513	2.8e-82
ZFIN|ZDB-GENE-040426-2884	412	dnaja2 "DnaJ (Hsp40) homolog,	0.904	0.733	0.514	1.8e-80
UNIPROTKB|Q2HJ94	412	DNAJA2 "DnaJ homolog subfamily	0.898	0.728	0.503	4.2e-79
UNIPROTKB|O60884	412	DNAJA2 "DnaJ homolog subfamily	0.898	0.728	0.503	5.4e-79
UNIPROTKB|F1RP05	412	LOC100521133 "Uncharacterized	0.898	0.728	0.503	5.4e-79
MGI|MGI:1931882	412	Dnaja2 "DnaJ (Hsp40) homolog,	0.898	0.728	0.5	2.3e-78
UNIPROTKB|Q5M9H7	412	Dnaja2 "DnaJ homolog subfamily	0.898	0.728	0.5	2.3e-78
UNIPROTKB|E2R7F3	413	DNAJA2 "Uncharacterized protei	0.898	0.726	0.501	4.8e-78

TAIR|locus:2081378 J3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
 Identities = 218/315 (69%), Positives = 249/315 (79%)

Query:     1 MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
             MFGR P ++S+NTK+YEILGV KSA+ ++LKKAY+KAA+KNHPDKGGDPEKFKEL QAYE
Sbjct:     1 MFGRGPSKKSDNTKFYEILGVPKSASPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60

Query:    60 VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGE 119
             VLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF                    ++GE
Sbjct:    61 VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGPFGGNTSRQRRQ-RRGE 119

Query:   120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQI 179
             DVVH LKVSLED+Y GT KKLSLSRN LC                 GCQG+GMK++ RQ+
Sbjct:   120 DVVHPLKVSLEDVYLGTMKKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQL 179

Query:   180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
             G GMIQQMQH C EC+G GE I++RD+CPQCK +KV  EKKVLEV+VEKGMQH QKI FE
Sbjct:   180 GPGMIQQMQHACNECKGTGETINDRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFE 239

Query:   240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
             GQADEAPDT+TGDIVF+LQ KEHPKFKRK +DL+V+HTLSLTEALCGFQF LTHLDGR L
Sbjct:   240 GQADEAPDTVTGDIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSL 299

Query:   300 LIKSNPGEIIKPGIY 314
             LIKSNPGE++KP  Y
Sbjct:   300 LIKSNPGEVVKPDSY 314

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

GO:0043462 "regulation of ATPase activity" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0009911 "positive regulation of flower development" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

TAIR|locus:505006628 J2 "DNAJ homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
 Identities = 212/315 (67%), Positives = 244/315 (77%)

Query:     1 MFGRTP-RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 59
             MFGR P R+S+NTK+YEILGV K+A  ++LKKAY+KAA+KNHPDKGGDPEKFKEL QAYE
Sbjct:     1 MFGRGPSRKSDNTKFYEILGVPKTAAPEDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYE 60

Query:    60 VLSDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGE 119
             VLSDPEKR+IYDQYGEDALKEGMGG G  H+PFDIF                    ++GE
Sbjct:    61 VLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGSGGHPFGSHSRGRRQRRGE 120

Query:   120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQI 179
             DVVH LKVSLED+Y GTTKKLSLSR  LC                 GCQG+GMKI+ RQ 
Sbjct:   121 DVVHPLKVSLEDVYLGTTKKLSLSRKALCSKCNGKGSKSGASMKCGGCQGSGMKISIRQF 180

Query:   180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
             G GM+QQ+QH C +C+G GE I++RD+CPQCK  KV  EKKVLEV+VEKGMQH QKI F 
Sbjct:   181 GPGMMQQVQHACNDCKGTGETINDRDRCPQCKGEKVVSEKKVLEVNVEKGMQHNQKITFS 240

Query:   240 GQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQL 299
             GQADEAPDT+TGDIVF++Q KEHPKFKRK +DL+V+HT+SLTEALCGFQF LTHLD RQL
Sbjct:   241 GQADEAPDTVTGDIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQL 300

Query:   300 LIKSNPGEIIKPGIY 314
             LIKS PGE++KP  Y
Sbjct:   301 LIKSKPGEVVKPDSY 315

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS;RCA

GO:0009408 "response to heat" evidence=IEA;RCA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

ZFIN|ZDB-GENE-030131-2884 dnaja2l "DnaJ (Hsp40) homolog, subfamily A, member 2, like" [Danio rerio (taxid:7955)]

 Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
 Identities = 156/304 (51%), Positives = 207/304 (68%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y++LGVS SA+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVL++PEK+D+
Sbjct:     6 DTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLTNPEKKDL 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVS 128
             YD+YGE  L+EG GG     + F  IF                    ++GED++H LKVS
Sbjct:    66 YDRYGEQGLREGGGGGAGMEDIFSHIFGGGLFGFMGGQSSKSRNGGRRRGEDMIHPLKVS 125

Query:   129 LEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQ 188
             LEDLYNG T KL LS+N+LC                  C+G GM+I  RQ+  GM+QQMQ
Sbjct:   126 LEDLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKCSTCRGRGMRIMIRQLAPGMVQQMQ 185

Query:   189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT 248
              VC +C G GEVI E+D+C +C   KV +E KVLEVHV+KGM+HGQKI F G+AD++P+T
Sbjct:   186 SVCTDCNGEGEVIHEKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPNT 245

Query:   249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI 308
               GDI+ +LQ K+H +F+R  +DL++ H + L EALCGFQF LTHLDGR L+IK  PG++
Sbjct:   246 EPGDIILVLQEKDHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGKV 305

Query:   309 IKPG 312
             ++PG
Sbjct:   306 VEPG 309

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-040426-2884 dnaja2 "DnaJ (Hsp40) homolog, subfamily A, member 2" [Danio rerio (taxid:7955)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 156/303 (51%), Positives = 204/303 (67%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y+ILGVS SA+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVL++PEKRD+
Sbjct:     6 DTKLYDILGVSPSASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLTNPEKRDM 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFDIFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVSL 129
             YD+YGE  L+EG  G G   + F                       ++GED+VH LKVSL
Sbjct:    66 YDRYGEQGLREGGCGGGGMDDIFSHIFGGGLFGFMGGQGRSRNGGRRRGEDMVHPLKVSL 125

Query:   130 EDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQH 189
             EDLYNG T KL LS+N+LC                  C+G GM+I  RQ+G GM+QQMQ 
Sbjct:   126 EDLYNGKTTKLQLSKNVLCSTCNGQGGKSGAVQKCTACRGRGMRIMIRQLGPGMVQQMQS 185

Query:   190 VCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTI 249
             VC +C G GEVISE+D+C +C+  KV +E K+LEVHV+KGM+HGQKI F G+AD++P   
Sbjct:   186 VCTDCNGEGEVISEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQKITFGGEADQSPGVE 245

Query:   250 TGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEII 309
              GDIV +LQ KEH  ++R+ +DL++ H + L EALCGF F L HLDGRQ+++K   G+II
Sbjct:   246 PGDIVLVLQEKEHETYRREGNDLHMTHKIGLVEALCGFHFTLKHLDGRQIVVKYPAGKII 305

Query:   310 KPG 312
             +PG
Sbjct:   306 EPG 308

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q2HJ94 DNAJA2 "DnaJ homolog subfamily A member 2" [Bos taurus (taxid:9913)]

 Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
 Identities = 153/304 (50%), Positives = 204/304 (67%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y+ILGV   A+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR++
Sbjct:     6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKREL 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVS 128
             YD+YGE  L+EG GG G   + F  IF                    ++GED++H LKVS
Sbjct:    66 YDRYGEQGLREGSGGGGGMDDIFSHIF--GGGLFSFMGNQSRSRNGRRRGEDMMHPLKVS 123

Query:   129 LEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQ 188
             LEDLYNG T KL LS+N+LC                  C+G G++I  RQ+  GM+QQMQ
Sbjct:   124 LEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQ 183

Query:   189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT 248
              VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP  
Sbjct:   184 SVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGV 243

Query:   249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI 308
               GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG++
Sbjct:   244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKV 303

Query:   309 IKPG 312
             I+PG
Sbjct:   304 IEPG 307

GO:0016020 "membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|O60884 DNAJA2 "DnaJ homolog subfamily A member 2" [Homo sapiens (taxid:9606)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 153/304 (50%), Positives = 204/304 (67%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y+ILGV   A+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR++
Sbjct:     6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKREL 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVS 128
             YD+YGE  L+EG GG G   + F  IF                    ++GED++H LKVS
Sbjct:    66 YDRYGEQGLREGSGGGGGMDDIFSHIF--GGGLFGFMGNQSRSRNGRRRGEDMMHPLKVS 123

Query:   129 LEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQ 188
             LEDLYNG T KL LS+N+LC                  C+G G++I  RQ+  GM+QQMQ
Sbjct:   124 LEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQ 183

Query:   189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT 248
              VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP  
Sbjct:   184 SVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGV 243

Query:   249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI 308
               GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG++
Sbjct:   244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKV 303

Query:   309 IKPG 312
             I+PG
Sbjct:   304 IEPG 307

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=TAS

UNIPROTKB|F1RP05 LOC100521133 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 153/304 (50%), Positives = 204/304 (67%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y+ILGV   A+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR++
Sbjct:     6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKREL 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVS 128
             YD+YGE  L+EG GG G   + F  IF                    ++GED++H LKVS
Sbjct:    66 YDRYGEQGLREGSGGGGGMDDIFSHIF--GGGLFGFMGNQSRSRNGRRKGEDMMHPLKVS 123

Query:   129 LEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQ 188
             LEDLYNG T KL LS+N+LC                  C+G G++I  RQ+  GM+QQMQ
Sbjct:   124 LEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQ 183

Query:   189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT 248
              VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP  
Sbjct:   184 SVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGV 243

Query:   249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI 308
               GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG++
Sbjct:   244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKV 303

Query:   309 IKPG 312
             I+PG
Sbjct:   304 IEPG 307

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1931882 Dnaja2 "DnaJ (Hsp40) homolog, subfamily A, member 2" [Mus musculus (taxid:10090)]

 Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
 Identities = 152/304 (50%), Positives = 203/304 (66%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y+ILGV   A+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR++
Sbjct:     6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKREL 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVS 128
             YD+YGE  L+EG GG G   + F  IF                    ++GED++H LKVS
Sbjct:    66 YDRYGEQGLREGSGGGGGMDDIFSHIF--GGGLFGFMGNQSRSRNGRRRGEDMMHPLKVS 123

Query:   129 LEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQ 188
             LEDLYNG T KL LS+N+LC                  C+G G++I  RQ+  GM+QQMQ
Sbjct:   124 LEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQ 183

Query:   189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT 248
              VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP  
Sbjct:   184 SVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGV 243

Query:   249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI 308
               GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLD RQ+++K  PG++
Sbjct:   244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKV 303

Query:   309 IKPG 312
             I+PG
Sbjct:   304 IEPG 307

GO:0001948 "glycoprotein binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0006260 "DNA replication" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q5M9H7 Dnaja2 "DnaJ homolog subfamily A member 2" [Rattus norvegicus (taxid:10116)]

 Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
 Identities = 152/304 (50%), Positives = 203/304 (66%)

Query:    11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDI 69
             +TK Y+ILGV   A+E+ELKKAYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR++
Sbjct:     6 DTKLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKREL 65

Query:    70 YDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKVS 128
             YD+YGE  L+EG GG G   + F  IF                    ++GED++H LKVS
Sbjct:    66 YDRYGEQGLREGSGGGGGMDDIFSHIF--GGGLFGFMGNQSRSRNGRRRGEDMMHPLKVS 123

Query:   129 LEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQMQ 188
             LEDLYNG T KL LS+N+LC                  C+G G++I  RQ+  GM+QQMQ
Sbjct:   124 LEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQMQ 183

Query:   189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT 248
              VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP  
Sbjct:   184 SVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPGV 243

Query:   249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI 308
               GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLD RQ+++K  PG++
Sbjct:   244 EPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKV 303

Query:   309 IKPG 312
             I+PG
Sbjct:   304 IEPG 307

GO:0005524 "ATP binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|E2R7F3 DNAJA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
 Identities = 153/305 (50%), Positives = 204/305 (66%)

Query:    11 NTKYYEILGVSKSATEDELKK-AYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRD 68
             +TK Y+ILGV   A+E+ELKK AYRK A + HPDK  +  +KFKE+  AYEVLS+PEKR+
Sbjct:     6 DTKLYDILGVPPGASENELKKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRE 65

Query:    69 IYDQYGEDALKEGMGGAGAAHNPFD-IFEXXXXXXXXXXXXXXXXXXXKQGEDVVHTLKV 127
             +YD+YGE  L+EG GG G   + F  IF                    ++GED++H LKV
Sbjct:    66 LYDRYGEQGLREGSGGGGGMDDIFSHIF--GGGLFGFMGNQSRSRNGRRRGEDMMHPLKV 123

Query:   128 SLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKITTRQIGLGMIQQM 187
             SLEDLYNG T KL LS+N+LC                  C+G G++I  RQ+  GM+QQM
Sbjct:   124 SLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQLAPGMVQQM 183

Query:   188 QHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPD 247
             Q VC +C G GEVI+E+D+C +C+  KV +E K+LEVHV+KGM+HGQ+I F G+AD+AP 
Sbjct:   184 QSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITFTGEADQAPG 243

Query:   248 TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGE 307
                GDIV +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG+
Sbjct:   244 VEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGK 303

Query:   308 IIKPG 312
             +I+PG
Sbjct:   304 VIEPG 308

GO:0046872 "metal ion binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9JMC3	DNJA4_MOUSE	No assigned EC number	0.5331	0.8802	0.7405	yes	no
P43644	DNJH_ATRNU	No assigned EC number	0.7151	0.9760	0.7817	N/A	no
P31689	DNJA1_HUMAN	No assigned EC number	0.5165	0.8772	0.7380	yes	no
Q5NVI9	DNJA1_PONAB	No assigned EC number	0.5165	0.8742	0.7373	yes	no
Q03363	DNJH1_ALLPO	No assigned EC number	0.7541	0.8892	0.7481	N/A	no
Q2HJ94	DNJA2_BOVIN	No assigned EC number	0.5508	0.8952	0.7257	yes	no
Q04960	DNJH_CUCSA	No assigned EC number	0.7546	0.9461	0.7651	N/A	no
P42824	DNJH2_ALLPO	No assigned EC number	0.7670	0.9520	0.7607	N/A	no
P42825	DNAJ2_ARATH	No assigned EC number	0.7100	0.9760	0.7780	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	334
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	1e-121
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-100
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	6e-92
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	4e-78
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	9e-69
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-61
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	2e-61
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	2e-60
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	3e-60
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	3e-60
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	3e-58
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	3e-58
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	1e-57
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	3e-57
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	2e-56
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	1e-55
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	1e-54
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	1e-53
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-53
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	2e-53
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	2e-52
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	5e-52
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	7e-50
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	8e-48
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	1e-46
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	2e-46
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	4e-44
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	9e-39
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	9e-37
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	1e-29
pfam00226	63	pfam00226, DnaJ, DnaJ domain	1e-28
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	6e-27
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	1e-23
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	5e-21
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	2e-20
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	4e-20
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	1e-19
cd10719	65	cd10719, DnaJ_zf, Zinc finger domain of DnaJ and H	1e-17
pfam00684	65	pfam00684, DnaJ_CXXCXGXG, DnaJ central domain	2e-16
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	1e-10
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	7e-09
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	2e-08
PHA03102	153	PHA03102, PHA03102, Small T antigen; Reviewed	3e-08
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	6e-08
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	5e-07
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	6e-07
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	4e-05
PTZ00100	116	PTZ00100, PTZ00100, DnaJ chaperone protein; Provis	7e-05
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	1e-04
COG1107	715	COG1107, COG1107, Archaea-specific RecJ-like exonu	5e-04
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	0.001

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  354 bits (911), Expect = e-121
 Identities = 154/334 (46%), Positives = 212/334 (63%), Gaps = 23/334 (6%)

Query: 3   GRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLS 62
           GR  R  +N K YE+L +SK  T  E+KKAYRK A+K+HPDKGGDPEKFKE+ +AYEVLS
Sbjct: 19  GRRKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLS 78

Query: 63  DPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVV 122
           DPEKR IYD+YGE+ L+ G   A    +  D+F+  FGGG        +   +K+GED+V
Sbjct: 79  DPEKRKIYDEYGEEGLEGGEQPA----DASDLFDLIFGGG-------RKPGGKKRGEDIV 127

Query: 123 HTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLG 182
             LKV+LE +YNG  +KL+++++++C  C+G G    A   C  C G G+++  RQ+G  
Sbjct: 128 SHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMG-S 186

Query: 183 MIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQA 242
           MI Q Q  C  C G G++I E  KC  C    V + +K+LEV+++KG+ +  KI F G+A
Sbjct: 187 MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEA 246

Query: 243 DEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIK 302
           DE P+ I G++VFIL  K H  FKR+  DL++   +SL EAL GF F +THLDGR+LL+ 
Sbjct: 247 DEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVN 306

Query: 303 SNPGEIIKPG-----------IYFDNFTSVNLYL 325
           + PGE++KPG            Y   F   NLY+
Sbjct: 307 TPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYV 340

Length = 421

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  298 bits (765), Expect = e-100
 Identities = 122/297 (41%), Positives = 168/297 (56%), Gaps = 18/297 (6%)

Query: 11  NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDP---EKFKELGQAYEVLSDPEK 66
              YYEILGVSK A+E+E+KKAYRK A K HPD+  GD    EKFKE+ +AYEVLSDPEK
Sbjct: 3   KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEK 62

Query: 67  RDIYDQYGEDALKE----GMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVV 122
           R  YDQ+G    K     G G  G   +  DIFE FFGG   G GG  R  R ++G D+ 
Sbjct: 63  RAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGG---GGGGRRRPNRPRRGADLR 119

Query: 123 HTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGL 181
           + L+++LE+   G  K++ ++R++ C  C G G+K G   K C  C G+G   T ++ G 
Sbjct: 120 YNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTG- 178

Query: 182 GMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQ 241
                 Q  CP C G G++I   D C +CK     ++KK + V++  G+  G +I   G+
Sbjct: 179 --FFSFQQTCPTCNGTGKIIK--DPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGE 234

Query: 242 ADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
            +  P     GD+   + +K HP F+R  DDLY +  +S TEA  G +  +  LDGR
Sbjct: 235 GEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR 291

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  277 bits (712), Expect = 6e-92
 Identities = 123/316 (38%), Positives = 172/316 (54%), Gaps = 26/316 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYEILGVSK A+E+E+KKAYRK A K HPD+  D    EKFKE+ +AYEVLSDPEKR  Y
Sbjct: 2   YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQY 61

Query: 71  DQYGEDALKEGMGGAGAAHNPF---------DIFESFFGGGTFGAGGSSRGRRR--KQGE 119
           DQ+G      G GG G   N F         DIF  FFGGG    GGS R RR   ++GE
Sbjct: 62  DQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGG----GGSGRRRRSGPRRGE 117

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQ 178
           D+ + L+++ E+   G  K++ + R   C  C G G+K G     C  C GTG     + 
Sbjct: 118 DLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQG 177

Query: 179 IGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAF 238
              G  QQ Q  CP C G G++I E   C  CK     +E+K + V +  G+  GQ++  
Sbjct: 178 TPFGFFQQQQ-TCPTCGGEGKIIKE--PCSTCKGKGRVKERKTITVKIPAGVDTGQRLRV 234

Query: 239 EGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
            G+ +        GD+  ++++K H  F+R  +DLY++  +S T+A+ G +  +  LDG 
Sbjct: 235 SGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGD 294

Query: 298 -QLLIKSN--PGEIIK 310
            +L I +    G + +
Sbjct: 295 VKLKIPAGTQSGTVFR 310

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  243 bits (622), Expect = 4e-78
 Identities = 123/296 (41%), Positives = 173/296 (58%), Gaps = 24/296 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDP---EKFKELGQAYEVLSDPEKRDI 69
           YYE+LGVS++A+EDE+KKAYRK AMK HPD+  GD    EKFKE+ +AYEVLSDP+KR  
Sbjct: 6   YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAA 65

Query: 70  YDQYGEDALKEGMGGAGA-AHNPF-DIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKV 127
           YDQYG  A ++G GG G      F DIF   FG   FG G     +R ++G D+ + +++
Sbjct: 66  YDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDI-FGGGRGGGRQRARRGADLRYNMEI 124

Query: 128 SLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGLGMIQQ 186
           +LE+   G TK++ +   + C  C G G+K G   K C  C G G ++  +Q G   +QQ
Sbjct: 125 TLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAG-QVRMQQ-GFFTVQQ 182

Query: 187 MQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKI--AFEGQADE 244
               CP C G G++I  +D C +C      +++K L V +  G+  G +I  + EG+A E
Sbjct: 183 ---TCPTCHGRGKII--KDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGE 237

Query: 245 --APDTITGDI-VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
              P    GD+ V I  +KEHP F+R  +DLY +  +S T A  G +  +  LDGR
Sbjct: 238 RGGP---AGDLYVQI-HVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGR 289

Length = 371

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  219 bits (559), Expect = 9e-69
 Identities = 118/322 (36%), Positives = 176/322 (54%), Gaps = 34/322 (10%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYEILGVS++AT++E+KKAYR+ A K HPD   +P   EKFKE+ +AY+VLSDPEKR +Y
Sbjct: 5   YYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLY 64

Query: 71  DQYGEDALKEGMGGAGAAHNPF---------DIFESFFG----GGTFGAGGSSRGRRRK- 116
           DQ+G  A   G G        F         DI E  F     G  FG   ++R RR+  
Sbjct: 65  DQFGHAAF-SGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTY 123

Query: 117 ----QGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTG 171
               +GED+  T+++SLE+ Y GTT  L + R + C  C G G   G+  K C  C G+G
Sbjct: 124 QRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSG 183

Query: 172 MKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQ 231
            +I  R    G   ++   CP C G G +   R+ C +C    +  +K+ ++V +  G+ 
Sbjct: 184 -EIYQR----GGFFRISQTCPTCGGEGVL---REPCSKCNGRGLVIKKETIKVRIPPGVD 235

Query: 232 HGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFA 290
           +G K+   G+          GD+  I+++K HP F+R+ D+LY+D  +++ EA+ G +  
Sbjct: 236 NGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELE 295

Query: 291 LTHLDGRQLLIKSNPGEIIKPG 312
           +  LDG++  +K  PG   K G
Sbjct: 296 VPLLDGKKEKVKIPPG--TKEG 315

Length = 382

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  200 bits (511), Expect = 1e-61
 Identities = 106/317 (33%), Positives = 167/317 (52%), Gaps = 24/317 (7%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
           YYE+LGVSK+AT DE+KKAYRK A++ HPDK  GD    EKFKE  +AY+VLSDP+KR  
Sbjct: 7   YYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSR 66

Query: 70  YDQYGEDALKEGMGGAGAAHNPF----------DIFESFFGG--GTFGAGGSSRGRRRKQ 117
           YDQ+G   +    GG G +              DIF    GG  G  G GG    +R  +
Sbjct: 67  YDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFR 126

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK-SGALGKCYGCQGTGMKITT 176
           G D+   +K++L+++  G  KK  + + + C  C G G++ +     C  C+G+G     
Sbjct: 127 GSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRV 186

Query: 177 RQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKI 236
           +   LG +Q  Q  CP C G G++I  + KC +C    +   ++V+ V +  G+  G ++
Sbjct: 187 QNTILGTMQT-QSTCPTCNGEGKII--KKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQL 243

Query: 237 AFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLD 295
           +  G+ +      + GD++ +++ + HP+  R  +DL  +  LS+  A  G    +  +D
Sbjct: 244 SMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTID 303

Query: 296 GRQLLIKSNPGEIIKPG 312
           G+   +K   G   +PG
Sbjct: 304 GK-AKVKIEAG--TQPG 317

Length = 386

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  199 bits (509), Expect = 2e-61
 Identities = 102/292 (34%), Positives = 151/292 (51%), Gaps = 22/292 (7%)

Query: 10  NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEK 66
           NNT+YY+ LGVSK A++DE+KKAYRK + K HPD   +P   EK+KE+ +AYE LSDP+K
Sbjct: 2   NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQK 61

Query: 67  RDIYDQYGEDALKEGMGGAGAAHNPF----------DIFESFFGGGTFGAGGSSRGRRRK 116
           R  YDQYG      G GG       F          DIF SFFGGG    G        +
Sbjct: 62  RAAYDQYGAAGANGGFGGGAGGFGGFDGSGGFGGFEDIFSSFFGGG----GARRNPNAPR 117

Query: 117 QGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALG-KCYGCQGTGMKIT 175
           QG+D+ + + +  E+   G  K++S +R   C  C G G+K G     C  C G+G+   
Sbjct: 118 QGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITV 177

Query: 176 TRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQK 235
             Q  LGM+++ Q  C  C G G+ I  ++ C  C      ++   + V +  G++ GQ+
Sbjct: 178 DTQTPLGMMRR-QVTCDVCHGTGKEI--KEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQ 234

Query: 236 IAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCG 286
           I  +GQ +   +    GD+  + +++   KF+R    +Y    +S  +A  G
Sbjct: 235 IRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALG 286

Length = 380

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  197 bits (503), Expect = 2e-60
 Identities = 107/305 (35%), Positives = 154/305 (50%), Gaps = 18/305 (5%)

Query: 12  TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRD 68
             YY +LGVS++A++ E+K+AYRK A + HPD   D    EKFKE+  AYEVLSDPEKR 
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRR 62

Query: 69  IYDQYGEDALKEGMGGAGAAHNPF----DIFESFFGGGTFGAGGSSRGRRRKQGEDVVHT 124
           I D  G D L+   GG G     F    D+FE+FFGGG    G   R R    G D +  
Sbjct: 63  IVD-LGGDPLESAGGGGGGFGGGFGGLGDVFEAFFGGGAASRGPRGRVRP---GSDSLLR 118

Query: 125 LKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGLGM 183
           +++ LE+   G TK++++   +LC +C GKG+   +    C  C G G   T ++  LG 
Sbjct: 119 MRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLG- 177

Query: 184 IQQM-QHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQA 242
            Q M    CP CRG GEVI   D C +C  +   + ++ + V +  G+  G +I    Q 
Sbjct: 178 -QVMTSRPCPTCRGVGEVI--PDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQG 234

Query: 243 DEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLI 301
           +  P     GD+   +  + H  F R  DDL+   ++ + +A  G    +  +      I
Sbjct: 235 EVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEI 294

Query: 302 KSNPG 306
              PG
Sbjct: 295 TIPPG 299

Length = 378

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  198 bits (504), Expect = 3e-60
 Identities = 117/314 (37%), Positives = 163/314 (51%), Gaps = 35/314 (11%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDI 69
           YYE+LGVS+SA +DE+KKAYRK A+K HPDK  D     E FKE+ +AYEVLS+ +KR  
Sbjct: 5   YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRR 64

Query: 70  YDQYGE-----DALKEGMGGAGAAHNPF-DIFESF---FGGGTFGAGGSSRG-------- 112
           YDQ+G       A   G  G G     F DIF +F   FGGG    GGS  G        
Sbjct: 65  YDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGG 124

Query: 113 --RRRK----QGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYG 166
             RRR      G D+   LK++LE++  G  K L + + + C +C G GSK+GA   C  
Sbjct: 125 GRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPT 184

Query: 167 CQGTGMKITTRQIGLGMIQQMQHV--CPECRGAGEVISERDKCPQCKANKVTQEKKVLEV 224
           C G+G     RQ    M  Q  ++  CP C G G V+  +D+CP C    + Q +  ++V
Sbjct: 185 CHGSG---EVRQASKTMFGQFVNITACPTCGGEGRVV--KDRCPACYGEGIKQGEVTVKV 239

Query: 225 HVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEA 283
            V  G+Q G  +   GQ +  P     GD++ +++ K H  F R  DD+  +  +S  + 
Sbjct: 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDL 299

Query: 284 LCGFQFALTHLDGR 297
           + G +  +  LDG 
Sbjct: 300 VLGTKVEVPTLDGA 313

Length = 397

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  196 bits (501), Expect = 3e-60
 Identities = 112/312 (35%), Positives = 163/312 (52%), Gaps = 25/312 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDI 69
           YYEILGV++ A+E+E+KK+YRK AMK HPD+  GD E    FKE  +AYEVLSDP+KR I
Sbjct: 6   YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGI 65

Query: 70  YDQYGEDALK-EGMGGAGAAHNPF----DIFESFFGGGTFGAGGSSRGRRR-KQGEDVVH 123
           YDQYG + L   G  G     + F    DIFE FFG   FG G   R R   + G D+ +
Sbjct: 66  YDQYGHEGLSGTGFSGFSGFDDIFSSFGDIFEDFFG---FGGGRRGRSRTAVRAGADLRY 122

Query: 124 TLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGLG 182
            L +   +   GT K++ + +   C +C G G + G     C  C G+G ++T  Q G  
Sbjct: 123 DLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSG-QVTQSQ-GFF 180

Query: 183 MIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQA 242
            I+     CP CRG G+VI     C  C      +  K ++V +  G+  G ++   G+ 
Sbjct: 181 SIRT---TCPRCRGMGKVIVSP--CKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEG 235

Query: 243 DEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG-RQLL 300
           +        GD+   L ++ H  F+R  +D++    +S  +A  G Q  +  L+G R+L 
Sbjct: 236 EAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELK 295

Query: 301 IK--SNPGEIIK 310
           I   + PG+I +
Sbjct: 296 IPKGTQPGDIFR 307

Length = 366

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  191 bits (488), Expect = 3e-58
 Identities = 107/297 (36%), Positives = 158/297 (53%), Gaps = 26/297 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDI 69
           YYE+LGVS+ A+EDE+KKAYRK A++ HPD+   +PE   KFKE  +AYEVL D EKR  
Sbjct: 6   YYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRAR 65

Query: 70  YDQYGEDALKE--GMGGAGAAHNPF----DIFESFFGGGTFGAGGSSRGRRRKQGEDVVH 123
           YD++G   +    G GG  +A + F    DIF   FG   F  GGS RG R + G D+ +
Sbjct: 66  YDRFGHAGVNGNGGFGGFSSAEDIFSHFSDIFGDLFG---FSGGGSRRGPRPQAGSDLRY 122

Query: 124 TLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGLG 182
            L VS      G    L + +N+ C  C G G+  G   + C  C G+G ++   Q   G
Sbjct: 123 NLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSG-QVRQSQ---G 178

Query: 183 MIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQA 242
              Q+   CP CRG G VI+    CP+CK + + Q+ + L+V +  G+  G ++   G+ 
Sbjct: 179 FF-QIAVPCPVCRGEGRVITHP--CPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEG 235

Query: 243 DEAPDTI---TGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG 296
           +  P       GD+  ++ +++   F+R+  DL V   +S  +A  G +  +  LD 
Sbjct: 236 E--PGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDD 290

Length = 373

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  191 bits (488), Expect = 3e-58
 Identities = 106/290 (36%), Positives = 156/290 (53%), Gaps = 29/290 (10%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPD---KGGDPEKFKELGQAYEVLSDPEKRDIY 70
           YYE+LGVSKSA++DE+KKAYRK + K HPD   + G  EKFKE+ +AYEVLSD +KR  Y
Sbjct: 6   YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQY 65

Query: 71  DQYGEDALKEGMGGAGAAHNPF-------DIFESFFGGGTFGAGGSSRGRRR-----KQG 118
           DQ+G     +G GG G     F       DIF SFFGGG         GRRR     +QG
Sbjct: 66  DQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGGG---------GRRRDPNAPRQG 116

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTR 177
            D+ +T+ ++ E+   G  K++ + +   C  C G G+K G   + C  C G+G     +
Sbjct: 117 ADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQ 176

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
               G +   +  CP C G G+ I E  KCP C      +++K + V +  G+ +GQ+I 
Sbjct: 177 NTPFGRVVN-RQTCPHCNGTGQEIKE--KCPTCHGKGKVRKRKKINVKIPAGVDNGQQIR 233

Query: 238 FEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCG 286
             G+ +   +    GD+  + +++ H  F+R  DD+Y +  L+  +A  G
Sbjct: 234 VSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALG 283

Length = 376

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  190 bits (483), Expect = 1e-57
 Identities = 104/302 (34%), Positives = 161/302 (53%), Gaps = 17/302 (5%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYE+LGVS++A+ DE+K AYRK A+K HPD+  +    EKF ++ +AY VLSD EKR  Y
Sbjct: 4   YYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHY 63

Query: 71  DQYGEDALKEGMGG----AGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLK 126
           D++G  A   GM G     G   +P DIFE  FGG  FG G   RG  R  G+D+    +
Sbjct: 64  DRFGT-APGAGMPGGDPFGGMGFDPMDIFEQLFGGAGFGGGRGRRGPAR--GDDLETEAR 120

Query: 127 VSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK--CYGCQGTGMKITTRQIGLGMI 184
           ++LE    G   ++ + R   C  C G  ++ G      C  C+G G      +   G++
Sbjct: 121 ITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVV 180

Query: 185 QQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE 244
            + Q  CP CRG G++I+  D C  C+    T + + ++V + +G+  G +I   G  +E
Sbjct: 181 -ETQQPCPTCRGEGQIIT--DPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNE 237

Query: 245 APDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSN 304
            P    GD+   ++++ HP+ +R+ + L  +  +   +A  G Q  +  LDG Q +I+  
Sbjct: 238 GPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQ-VIEVK 295

Query: 305 PG 306
           PG
Sbjct: 296 PG 297

Length = 371

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  189 bits (481), Expect = 3e-57
 Identities = 107/303 (35%), Positives = 155/303 (51%), Gaps = 24/303 (7%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYEILGVS+ A +DELK+AYR+ A K HPD   +P   ++FKE+ +AYEVLSDPE R  Y
Sbjct: 5   YYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARY 64

Query: 71  DQYGEDALKEGMGGAGAAHNP-----F-DIFESFFGGGTFGAGGSSRGRRRK----QGED 120
           DQ+GE     G+ GA    +      F DIFE+FF G  FG  G   GRRR+    +G+D
Sbjct: 65  DQFGE----AGVSGAAGFPDMGDMGGFADIFETFFSG--FGGAGGQGGRRRRRGPQRGDD 118

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQI 179
           + + LK+   +   G  K++ +     C  C+G G+K G     C  C G G      + 
Sbjct: 119 LRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRT 178

Query: 180 GLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE 239
             G   Q+   CP C G G+VI   D C  C    V Q  K L++++  G+  G ++   
Sbjct: 179 PFGSFTQVS-ECPTCNGTGQVIE--DPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS 235

Query: 240 GQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQ 298
           G+ D        GD+   L +K  P+F+R   ++  +  +S  +A+ G    +  +DG  
Sbjct: 236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPV 295

Query: 299 LLI 301
            L 
Sbjct: 296 ELT 298

Length = 374

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  187 bits (476), Expect = 2e-56
 Identities = 111/302 (36%), Positives = 162/302 (53%), Gaps = 22/302 (7%)

Query: 11  NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEK 66
           +  YYE+LG+ K A++DE+KKA+RK A+K HPDK  G+    EKFKE+ +AY+VLSDP+K
Sbjct: 3   SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQK 62

Query: 67  RDIYDQYGEDALKEGMGGAGAAHNPF---------DIFESFFGGGTFGAGGSSRGRRRKQ 117
           +  YDQ+G        G        F         DIF+SFFGG   G G SSR R   Q
Sbjct: 63  KAQYDQFGTADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFGG---GFGSSSRRRNGPQ 119

Query: 118 -GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKIT 175
            G D+ +T+ ++ E+   G  K++S++RN  C  C G G+K G   K C  C GTG    
Sbjct: 120 RGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRV 179

Query: 176 TRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQK 235
            R   LG        C +C G+G+VI   D C +C      ++ + ++V+V  G+  G  
Sbjct: 180 QRNTPLGSFVSTT-TCDKCGGSGKVIE--DPCNKCHGKGKVRKNRKIKVNVPAGVDTGNV 236

Query: 236 IAFEGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHL 294
           I   GQ +   +   TGD+   +++  H  FKRK  D+Y+D  +S  +A  G +  +  +
Sbjct: 237 IPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTV 296

Query: 295 DG 296
           DG
Sbjct: 297 DG 298

Length = 380

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  185 bits (470), Expect = 1e-55
 Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 26/306 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
           YY+ILGVSKSA ++E+K AYRK A+K HPDK  G+    EKFKE  +AYE+L DP+KR  
Sbjct: 6   YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQA 65

Query: 70  YDQYGEDALKEGMGGAGA-AHNPF--------DIFESFFGGGTFGAGGSSRGRRR--KQG 118
           YDQ+G+  +  G GG G  A+  F        DIF  FFGGG    GGS  GRR   ++G
Sbjct: 66  YDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGG--RGGGSGGGRRSGPQRG 123

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKG-SKSGALGKCYGCQGTGMKITTR 177
            D+ + L+VSLED   G   K+ + R   C  C G G SK  +   C  C G+G     R
Sbjct: 124 SDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQ--IRR 181

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
             G   +      CP CRG G VIS  + C  C    + ++++ + + +  G++ G ++ 
Sbjct: 182 TQGFFSVAT---TCPTCRGKGTVIS--NPCKTCGGQGLQEKRRTINIKIPPGVETGSRLK 236

Query: 238 FEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG 296
             G+ +  P+    GD+  +  +K+H  F+R+ +DL +   +SL +A+ G +  +  +DG
Sbjct: 237 VSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDG 296

Query: 297 RQLLIK 302
           ++  +K
Sbjct: 297 KKAKMK 302

Length = 372

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  182 bits (463), Expect = 1e-54
 Identities = 109/316 (34%), Positives = 163/316 (51%), Gaps = 26/316 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPD-----KGGDPEKFKELGQAYEVLSDPEKRD 68
           YY+ILGV ++A+++++KKA+R+ A K HPD     K    EKFKE+ +AYEVLSDP+KR 
Sbjct: 5   YYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRR 64

Query: 69  IYDQYGEDALKEGMGGAGAAHNPF-------DIFESFFGGG---TFGAGGSSRGRRRKQG 118
            YDQ G   +  G GG+    + F       DIF   FGG     F +G  ++   R   
Sbjct: 65  QYDQTG--TVDFGAGGSNFNWDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRNID 122

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQ 178
            D+   L +SLED Y GT K++   RN +CP C G G+K+G L  C  C GTG +   R 
Sbjct: 123 LDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVR- 181

Query: 179 IGLGMIQQMQ-HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
            G G  + +    C  C G G +  E  KCP+C         + + V + KG     ++ 
Sbjct: 182 -GQGFFRMVTVTTCRTCGGRGRIPEE--KCPRCNGTGTVVVNEDISVKIPKGATDNLRLR 238

Query: 238 FEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
            +G+  ++    TGD+  +L++   P  +R  DDLYVD  ++  +A  G +  +     +
Sbjct: 239 VKGKG-QSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK 297

Query: 298 QLL---IKSNPGEIIK 310
             L     + PGE++K
Sbjct: 298 YNLKIPEGTQPGEVLK 313

Length = 365

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  180 bits (457), Expect = 1e-53
 Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 27/300 (9%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYE+LGV ++A + E+KKAYRK A K HPD   +    EKFKE+ +AY VLSD EKR  Y
Sbjct: 7   YYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRY 66

Query: 71  DQYGEDALKEGMGGAGAAH-----NPFDIFESFFGG-----GTFGAGGSSRGRRRKQGED 120
           DQ+G      GM G          N  DIF+ F  G       FG GG SR   ++ G D
Sbjct: 67  DQFGH----AGMDGFSQEDIFNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQR-GAD 121

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQI 179
           +   ++++LE+  +G  K + +     CP C G  ++ G+  K C  C GTG     R  
Sbjct: 122 IYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNT 181

Query: 180 GLGMIQQMQHV--CPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
            LG   QM +V  CP+C+G G+++     C  C    V +E K + V +  G++ G ++ 
Sbjct: 182 ILG---QMMNVTTCPDCQGEGKIV--EKPCSNCHGKGVVRETKTISVKIPAGVETGSRLR 236

Query: 238 FEGQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG 296
             G+ +        GD+  ++++K H  F+R+  +LY +  +S  +A  G    +  +DG
Sbjct: 237 VSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG 296

Length = 378

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  179 bits (456), Expect = 2e-53
 Identities = 109/298 (36%), Positives = 152/298 (51%), Gaps = 26/298 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYEILG+SK A+ +++KKAYRK AMK HPDK  +P   EKFKE+ +AY VLSD EKR  Y
Sbjct: 7   YYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQY 66

Query: 71  DQYGEDALKEGMGGAGAAHNPF---------DIFESFFGGGTFGAGGSSRGRRRKQGEDV 121
           D++G      G+    +A + F         DIFE FFGG   G      G RR  G D+
Sbjct: 67  DRFGH----AGIDNQYSAEDIFRGADFGGFGDIFEMFFGG---GGRRGRMGPRR--GSDL 117

Query: 122 VHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIG 180
            + L ++LE+   G  K + + R   C  C G G+K G   K C  C GTG   TTR   
Sbjct: 118 RYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRS-T 176

Query: 181 LGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEG 240
                     C  C G G+VI     CP C      ++ + + V+V  G   G ++   G
Sbjct: 177 PLGQFVTTTTCSTCHGRGQVIES--PCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSG 234

Query: 241 QADE-APDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           + +  +P   +GD+  +L +KEH  F+R  DD+  +  +S T+A  G    +  L G+
Sbjct: 235 EGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK 292

Length = 377

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  179 bits (456), Expect = 2e-53
 Identities = 104/301 (34%), Positives = 149/301 (49%), Gaps = 33/301 (10%)

Query: 12  TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKR 67
             YY ILGVSK+A+ +E+KKAYRK A+K HPDK  GD E   +FKE+ +AYEVLSD +KR
Sbjct: 1   MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKR 60

Query: 68  DIYDQYGEDALKEGMGGAGA--------AHNPF------------DIFESFFGGGTFGAG 107
           + YD+YG+D    G GG G         A   F              FE  FGG     G
Sbjct: 61  ESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFG 120

Query: 108 GSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSG-ALGKCYG 166
                   +QG      + +S E+   G  K+L +S    C  C G G+ S   +  C  
Sbjct: 121 MRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDR 180

Query: 167 CQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHV 226
           C+G+G  + +R    G    M   CPEC G G VI+  D C  C+     ++K+ + VH+
Sbjct: 181 CKGSGQVVQSR----GFF-SMASTCPECGGEGRVIT--DPCSVCRGQGRIKDKRSVHVHI 233

Query: 227 EKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALC 285
             G+  G ++  EG  D   +    GD+   + ++ HP F+R+ DDL ++  +   +A  
Sbjct: 234 PAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAAL 293

Query: 286 G 286
           G
Sbjct: 294 G 294

Length = 391

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  177 bits (450), Expect = 2e-52
 Identities = 108/304 (35%), Positives = 164/304 (53%), Gaps = 24/304 (7%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDI 69
           YYEILGV ++ATE+E+KKAYR+ A K HPD   GD E   KFKE+ +AYE+LSDP+KR  
Sbjct: 7   YYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQ 66

Query: 70  YDQYGEDALKEG--------MGGAGAAHNPF------DIFESFFGGGTFGAGGSSRGRRR 115
           YDQ+G  A   G         GG G     F      DIFE  FG   FG G        
Sbjct: 67  YDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDF-FGTGRRRAETGP 125

Query: 116 KQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKI 174
           ++G D+ + L+++ E+   GT K++ + R   C  CKG G+K G+    C  C GTG   
Sbjct: 126 QKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVR 185

Query: 175 TTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQ 234
           T +    G I  ++  C  C G G++I+  D C +C      + ++ ++V++  G+  GQ
Sbjct: 186 TRQNTPFGRIVNIR-TCDRCHGEGKIIT--DPCNKCGGTGRIRRRRKIKVNIPAGIDDGQ 242

Query: 235 KIAFEGQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTH 293
            I   G+ +        GD+  ++++K HP FKR+  ++Y++  ++ T+A  G +  +  
Sbjct: 243 MITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPT 302

Query: 294 LDGR 297
           LDG+
Sbjct: 303 LDGK 306

Length = 386

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  175 bits (445), Expect = 5e-52
 Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 27/305 (8%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEK----FKELGQAYEVLSDPEKRDI 69
           YYEILG+SK A++DE+KKAYRK A+K HPDK    ++    FKE  +AYEVL D  KR  
Sbjct: 5   YYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQ 64

Query: 70  YDQYGEDALKEGMG--GAGAAHNPF--------DIFESFFGGGTFGAGGSSRGRRRKQGE 119
           YD++G  A + G G  G     + F        DIF+SFF G      G  + R+ ++G+
Sbjct: 65  YDRFGHTAFEGGGGFEGFSGGFSGFSDIFEDFGDIFDSFFTGNR----GQDKNRKHEKGQ 120

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSG-ALGKCYGCQGTGMKITTRQ 178
           D+ + +++SLED Y G    ++++RN+LC  C GK S+ G +   C  C G+G     R 
Sbjct: 121 DLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSG-----RV 175

Query: 179 IGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAF 238
           +  G   ++   CP+C G G++IS  + C  CK     ++K+ +E+ +  G+   Q+I  
Sbjct: 176 MQGGGFFRVTTTCPKCYGNGKIIS--NPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKM 233

Query: 239 EGQADEAPDTIT-GDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
            G+    PD    GD+   + +K H  FKR   DLY    +S T+A  G +  +  +  +
Sbjct: 234 RGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASK 293

Query: 298 QLLIK 302
           ++ IK
Sbjct: 294 KIKIK 298

Length = 365

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  170 bits (432), Expect = 7e-50
 Identities = 110/322 (34%), Positives = 161/322 (50%), Gaps = 39/322 (12%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
           YY++LGV K ATE E+KKAYRK A + HPD   GD    E+FKE+ +AY+VLSD +KR  
Sbjct: 11  YYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKE 70

Query: 70  YDQ----YGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGS--------------SR 111
           YD+    +G    + G GG G     FD+ +  FGGG  G GG+              +R
Sbjct: 71  YDEARSLFGNGGFRPGPGGGGGGGFNFDLGD-LFGGGAQGGGGAGGGGGLGDVFGGLFNR 129

Query: 112 GRRRKQ---GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGC 167
           G RR Q   G DV   + +S  +  +G T  L L+    CP C G G+K+G   + C  C
Sbjct: 130 GGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTC 189

Query: 168 QGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVE 227
            GTG  ++    G  + +     CP+C+G G +    D C  CK +   +  + ++V + 
Sbjct: 190 SGTGQ-VSRNSGGFSLSEP----CPDCKGRGLIAD--DPCLVCKGSGRAKSSRTMQVRIP 242

Query: 228 KGMQHGQKIAFEGQADEAPDT---ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEAL 284
            G+  GQ+I   G+   AP       GD+  ++ +  HP F R  D+L V   ++  EA 
Sbjct: 243 AGVSDGQRIRLRGKG--APGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAA 300

Query: 285 CGFQFALTHLDGRQLLIKSNPG 306
            G +  +  L G  + +K  PG
Sbjct: 301 LGAEVRVPTLGGPPVTVKLPPG 322

Length = 389

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  164 bits (417), Expect = 8e-48
 Identities = 93/310 (30%), Positives = 152/310 (49%), Gaps = 20/310 (6%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPD-----KGGDPEKFKELGQAYEVLSDPEKRD 68
           YYEILGVS++AT++E+K+AY++   + HPD     +    +KFKE+ +AYEVLSDP+KR 
Sbjct: 6   YYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRA 65

Query: 69  IYDQYG----EDALKEGMGGAGAAHNPFDIFESFFGGGTFG------AGGSSRGRRRKQG 118
           +YD++G    +   +E   G G   + F  FE+ F    F            +    ++G
Sbjct: 66  MYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRG 125

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTR 177
           ED+ + ++V+L DL NG    +   R   CP C G G + G+    C  C GTG     R
Sbjct: 126 EDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREER 185

Query: 178 QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237
           +   G+    +  C  C G G++  E   C +C  +   + +    V +  G++ G  + 
Sbjct: 186 RSFFGVFVS-ERTCERCGGTGKIPGE--YCHECGGSGRIRRRVRTTVKIPAGVEDGTVLR 242

Query: 238 FEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG 296
             G  +        GD+  I++++  P+FKR   DL  D T+   +A+ G    +   +G
Sbjct: 243 ITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEG 302

Query: 297 RQLLIKSNPG 306
              ++K  PG
Sbjct: 303 GTTMLKIPPG 312

Length = 369

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  162 bits (411), Expect = 1e-46
 Identities = 98/318 (30%), Positives = 146/318 (45%), Gaps = 42/318 (13%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
           +Y+ LGVS  A+ +E+KKAYRK A + HPD   GDP   E+FK + +A++VLSDP KR  
Sbjct: 11  FYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKE 70

Query: 70  YDQY-----------GEDALKEGMGGAGAAHNP--FDIFESFFGGGTFGAGG-------- 108
           YD+                   G GG G   +   F++ + F   G  G GG        
Sbjct: 71  YDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGL 130

Query: 109 ------SSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSG-AL 161
                 S+R  R ++G D+     +   +   G T  L L+    C  C G G++ G + 
Sbjct: 131 FNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSP 190

Query: 162 GKCYGCQGTGMKITTRQIG-LGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKK 220
             C  C G+G  + +R  G  G  +     C +CRG G +I   D C +CK   VT   +
Sbjct: 191 KVCPTCNGSG--VISRNQGAFGFSEP----CTDCRGTGSIIE--DPCEECKGTGVTTRTR 242

Query: 221 VLEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLS 279
            + V +  G++ GQ+I   GQ +       +GD+   + ++    F R  DDL V   +S
Sbjct: 243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVS 302

Query: 280 LTEALCGFQFALTHLDGR 297
            TE   G   ++  LDG 
Sbjct: 303 FTELALGSTLSVPTLDGP 320

Length = 392

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  161 bits (408), Expect = 2e-46
 Identities = 100/291 (34%), Positives = 154/291 (52%), Gaps = 14/291 (4%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE---KFKELGQAYEVLSDPEKRDIY 70
           YYE+LGV ++A+ DE+KKAYRK A K HPD    P+   KFKE+ +AY+ LSDP+K+  Y
Sbjct: 6   YYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHY 65

Query: 71  DQYGEDALKEGMGGAGAA-HNPF-DIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVS 128
           DQ+G     +G GG GA     F DIF+ FFGGG    GG       +QG D+ +T+ + 
Sbjct: 66  DQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGG----GGRRNPNAPRQGADLQYTMTLE 121

Query: 129 LEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGLGMIQQM 187
            ++   G   ++ + R   C  C G G+K G   + C  C G+G     +    G +   
Sbjct: 122 FKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVN- 180

Query: 188 QHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPD 247
           + VC  C G G++I  + KC  C      +++K + V V  G+ HGQ++   GQ +   +
Sbjct: 181 RRVCHHCEGTGKII--KQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVN 238

Query: 248 -TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
               GD+  +  +K H  F+R  DD+Y +  L+  +   G +  +  L+G+
Sbjct: 239 GGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK 289

Length = 371

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  154 bits (391), Expect = 4e-44
 Identities = 100/317 (31%), Positives = 164/317 (51%), Gaps = 25/317 (7%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YYE+LGVSK+A+E E+++AYRK A + HPD    P   +K  E+ +A +VL D +KR  Y
Sbjct: 6   YYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQY 65

Query: 71  DQYGEDALKEGMGGAGAAHNPFDIFESFFG--GGT---------FGAGGSSRGRRRKQGE 119
           DQ+G  A  +G  G  +    F+   S  G  G +         FG+  S   +R  +G+
Sbjct: 66  DQFGHAAF-DGSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDY-QRSTKGQ 123

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQ 178
            V   + ++ ++L  G  K + L     C KC G G++S + +  C  C GTG  +  + 
Sbjct: 124 SVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKN 183

Query: 179 IGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAF 238
           +G    QQ    C  C GAG++I  ++KC  CK      E+K +EV++ KG++  Q+I  
Sbjct: 184 MGFFQFQQ-SAKCNVCNGAGKII--KNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKL 240

Query: 239 EGQADEAPDT-ITGDIVFILQLKEHPKFKR-KFDDLYVDHTLSLTEALCGFQFALTHLDG 296
             +   + +  + GD++  + LKE   F+    +D+ + + +S  +A+ G +  +  LDG
Sbjct: 241 SQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDG 300

Query: 297 --RQLLIKS-NPGEIIK 310
             +  L KS N  E+I 
Sbjct: 301 DIKYKLPKSINSNELII 317

Length = 372

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  140 bits (355), Expect = 9e-39
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 18/294 (6%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDK--GGDPEK-FKELGQAYEVLSDPEKRDIY 70
           YY+ILGVSK+A++ +LKKAY K A + HPD     D EK FKE+  AY+VL D +KR  Y
Sbjct: 5   YYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAY 64

Query: 71  DQYGEDALKEGMG-GAGAAHNPF-----DIFESFFGGGTFGAGGSSRGRRRKQGEDVVHT 124
           D++G DA +     G G  H  F     DIF  FF     G+  S     + +G D+ + 
Sbjct: 65  DRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYN 124

Query: 125 LKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSG-ALGKCYGCQGTGMKITTRQIGLGM 183
           L ++LE+ ++G  K +S S  + C  C G GS+ G  +  C  C G G   T  Q G   
Sbjct: 125 LTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVG--ATRMQQGFFT 182

Query: 184 IQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQAD 243
           I+Q    C +C+G G++I  ++ C +C       +++ L V++  G+++G +I   G+ +
Sbjct: 183 IEQ---ACHKCQGNGQII--KNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE 237

Query: 244 EA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG 296
                  +GD+   + +K H  +K    +L+    +S   A  G +  +  ++G
Sbjct: 238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEG 291

Length = 372

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  135 bits (340), Expect = 9e-37
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 21/298 (7%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDPE---KFKELGQAYEVLSDPEKRDI 69
           YYEIL V K + ++ +KK+YRK A+K HPD+  GD E   KFK + +AY VLSD +KR +
Sbjct: 5   YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64

Query: 70  YDQYGEDALKEGMGGAGAAHNPF-DIFE---SFFGGG-TFGAGGSSRGRRRKQGEDVVHT 124
           YD+YG    K+G+  AGA+ + F D FE   SFF     FGA GS R ++     D + T
Sbjct: 65  YDRYG----KKGLNQAGASQSDFSDFFEDLGSFFEDAFGFGARGSKR-QKSSIAPDYLQT 119

Query: 125 LKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMI 184
           +++S ++   G  K + +    +C  C G G+K  AL  C  C G G ++  RQ  +   
Sbjct: 120 IELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQG-QVFMRQGFMSFA 178

Query: 185 QQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE 244
           Q     C  C+G G++I  +  C  CK      + + ++  + +G+    ++  + + +E
Sbjct: 179 Q----TCGACQGKGKII--KTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNE 232

Query: 245 APDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIK 302
                 GD+    ++KE   FKR+  DL+++  +  T    G    +  L G +L +K
Sbjct: 233 YEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELK 290

Length = 369

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  114 bits (286), Expect = 1e-29
 Identities = 65/148 (43%), Positives = 83/148 (56%), Gaps = 19/148 (12%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YY ILGV K+A++DE+KKA++K A K HPD    P   EKFKE+ +AY VLSDPEKR IY
Sbjct: 6   YYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIY 65

Query: 71  DQYGEDALKEGMGG-----------AGAAHNPF-DIFESFFGG----GTFGAGGSSRGRR 114
           D YG  A   G  G           +G     F D F+  FGG    G FG    S GRR
Sbjct: 66  DTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRR 125

Query: 115 RKQGEDVVHTLKVSLEDLYNGTTKKLSL 142
            ++G D+   L ++LE+ Y G  K + +
Sbjct: 126 ARKGRDLEAELPLTLEEAYRGGEKVVEV 153

Length = 291

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  105 bits (264), Expect = 1e-28
 Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 4/62 (6%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDI 69
          YYEILGV + A+++E+KKAYRK A+K HPDK        EKFKE+ +AYEVLSDPEKR I
Sbjct: 2  YYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRAI 61

Query: 70 YD 71
          YD
Sbjct: 62 YD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  103 bits (259), Expect = 6e-27
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 215 VTQEKKVLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLY 273
             +EKK L V +  G+  GQ++   G+ D  P     GD+  ++++K HP F+R  +DLY
Sbjct: 30  RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLY 89

Query: 274 VDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIK 310
            +  +SLTEAL G +  +  L G ++ +K  PG    
Sbjct: 90  CEVPISLTEALLGGEIEVPTLGG-KVKLKIPPGTQPG 125

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 91.9 bits (229), Expect = 1e-23
 Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 5/60 (8%)

Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEK 66
          T YYEILGV + A+ DE+KKAYRK A+K HPDK         EKFKE+ +AYEVLSDPEK
Sbjct: 1  TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 84.5 bits (210), Expect = 5e-21
 Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 4/54 (7%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSD 63
          YY+ILGV   A+++E+KKAYRK A+K HPDK  D     EKFKE+ +AYEVLSD
Sbjct: 2  YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 88.3 bits (218), Expect = 2e-20
 Identities = 64/272 (23%), Positives = 97/272 (35%), Gaps = 49/272 (18%)

Query: 9   SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSD 63
           S+   YYEILGV  +A+ +E+KKAYRK A+K HPD+         EKFKE+ +AYE+LSD
Sbjct: 3   SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSD 62

Query: 64  PEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVH 123
           PE+R  YD+ G D    G     +A  P +      G      G  ++  R+    D+  
Sbjct: 63  PERRAEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADL-- 120

Query: 124 TLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGM 183
                           LS   + L         ++         +     +         
Sbjct: 121 ----------------LSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADN------ 158

Query: 184 IQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQAD 243
                    E     +    R               K L+  ++ G   G+ +  +G   
Sbjct: 159 -------FEEALAGVKKAVARLL------------GKALKSTIKAGALEGKALRLKGL-L 198

Query: 244 EAPDTITGDIVFILQLKEHPKFKRKFDDLYVD 275
           ++     G        K HP F  + DD Y  
Sbjct: 199 KSARGALGKARLKELSKRHPPFALEGDDKYPV 230

Length = 237

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 91.0 bits (225), Expect = 4e-20
 Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 7/89 (7%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEK---FKELGQAYEVLSDPEKRDIY 70
          YYE+LG+ + A E E+KKA+RK A K HPD+   P+    F E+ +A +VLS+P+KR  Y
Sbjct: 4  YYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANY 63

Query: 71 DQYGEDALKEGMGGAGAAHNPFDIFESFF 99
          D+YG D    G+          D+F SFF
Sbjct: 64 DKYGHD----GVDREDDFDFQADVFNSFF 88

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 87.6 bits (217), Expect = 1e-19
 Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 15/141 (10%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YY I+GV  +     +K AYR+ A K HPD   +P    +FKE+ +A+EVLSD ++R  Y
Sbjct: 6   YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEY 65

Query: 71  DQYGE--------DALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVV 122
           DQ  +           + G G +  A +  DIF S FG         SR R   +G D+ 
Sbjct: 66  DQLWQHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSIFG----QHARQSRQRPAARGHDIE 121

Query: 123 HTLKVSLEDLYNGTTKKLSLS 143
             + V LE+      + +S +
Sbjct: 122 IEVAVFLEETLTEHKRTISYN 142

Length = 306

>gnl|CDD|199908 cd10719, DnaJ_zf, Zinc finger domain of DnaJ and HSP40

 Score = 75.4 bits (186), Expect = 1e-17
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 148 CPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDK 206
           CP C G G+K G     C  C G+G     +  G     Q Q  CP C G G++I  +D 
Sbjct: 1   CPTCNGSGAKPGTKPKTCPTCGGSGQVRQVQGTG-FGFFQTQTTCPTCGGTGKII--KDP 57

Query: 207 CPQCK 211
           CP+CK
Sbjct: 58  CPKCK 62

Central/middle or CxxCxGxG-motif containing domain of DnaJ/Hsp40 (heat shock protein 40). DnaJ proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonin family. Hsp40 proteins are characterized by the presence of an N-terminal J domain, which mediates the interaction with Hsp70. This central domain contains four repeats of a CxxCxGxG motif and binds to two Zinc ions. It has been implicated in substrate binding. Length = 65

>gnl|CDD|216058 pfam00684, DnaJ_CXXCXGXG, DnaJ central domain

 Score = 72.0 bits (177), Expect = 2e-16
 Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 148 CPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDK 206
           CP C G G+K G     C  C G+G  +  RQ   G + QMQ  CP+C G G++I   D 
Sbjct: 1   CPHCHGTGAKPGKKPKTCPQCNGSGQ-VVKRQRTPGGVFQMQQTCPKCGGTGKIIK--DP 57

Query: 207 CPQCKANK 214
           C  CK   
Sbjct: 58  CKVCKGKG 65

The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found. Length = 65

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 15  YEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPE 65
           YEILG+ +  +E ++KK YR  +MK HPDK             EK+K + +AY +L+D +
Sbjct: 101 YEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK 160

Query: 66  KRDIYDQYGEDALKEGMG 83
           +R+ Y  YG     +   
Sbjct: 161 RRENYLNYGTPDSPQHTS 178

Length = 610

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 56.5 bits (137), Expect = 7e-09
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 16 EILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQY 73
          ++LG+  +A      ++KAY +   + HPDKGGD EK K L   Y+ L +   +     +
Sbjct: 15 DLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQE-GVKSARQSF 73

Query: 74 GED 76
          G  
Sbjct: 74 GTQ 76

Length = 647

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 55.2 bits (132), Expect = 2e-08
 Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 11  NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE---KFKELGQAYEVLSDPEKR 67
           +T +Y+ILGV  +A   E+ + Y K A   +P K    E   KFK++ +AY++L D +K+
Sbjct: 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKK 631

Query: 68  DIYDQYGEDALKE 80
            +Y+++G D +K 
Sbjct: 632 KMYNKFGYDGIKG 644

Length = 1136

>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 16 EILGVSKSATEDE--LKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKR 67
          ++LG+ +SA  +   ++KAY +  ++ HPDKGGD EK KEL   Y+   +  K 
Sbjct: 9  DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKS 62

Length = 153

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 49.1 bits (118), Expect = 6e-08
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 271 DLYVDHTLSLTEALCGFQFALTHLDGRQLLIK----SNPGEIIK-PG----IYFDNFTSV 321
           DLYV   +SL EAL G    +  LDGR++ IK    + PG+ ++  G    I        
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 322 NLYLH 326
           +L + 
Sbjct: 61  DLIVT 65

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 9/81 (11%)

Query: 6   PRRSNNTKYYEILGVSK---SATEDELKKAYRKAAMKNHPDKG------GDPEKFKELGQ 56
            +       Y +LG+SK    A   ++ KA++K   K HPDK       G  E FK + +
Sbjct: 37  FKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQK 96

Query: 57  AYEVLSDPEKRDIYDQYGEDA 77
           A EVL D + R  YD    DA
Sbjct: 97  AREVLGDRKLRLQYDSNDFDA 117

Length = 379

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 49.8 bits (120), Expect = 6e-07
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 11/71 (15%)

Query: 2   FGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDK---GGDP--------EK 50
           + +  R       Y++LGVS+S  + E+K+AYRK   ++HPDK    G P        EK
Sbjct: 190 YQQAQRGPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEK 249

Query: 51  FKELGQAYEVL 61
            +E+  AYE++
Sbjct: 250 AQEIQAAYELI 260

Length = 267

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score = 42.8 bits (102), Expect = 4e-05
 Identities = 8/29 (27%), Positives = 18/29 (62%)

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNIL 147
            D+ + L+++LE+ Y G  K++ + R + 
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVT 29

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 12/35 (34%), Positives = 28/35 (80%)

Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGG 46
          ++ Y+IL +S +A+++ +++A+++  ++NHPD GG
Sbjct: 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGG 99

Length = 116

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 132 LYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVC 191
           L   T   L  S  I CPKC+GKG+ +     C  C GTG  +T    G  ++   + +C
Sbjct: 41  LSRETVD-LFASFEIPCPKCRGKGTVTVYD-TCPECGGTGKVLTCDICGDIIVPWEEGLC 98

Query: 192 PECRGAGEVI 201
           PECR   +++
Sbjct: 99  PECRRKPKIV 108

Length = 715

>gnl|CDD|224032 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

 Score = 41.6 bits (98), Expect = 5e-04
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 9/71 (12%)

Query: 148 CPKCKGKGSKSGALGKCYGCQGTG------MKITTRQIGLGMIQQMQH--VCPECRGAGE 199
           CP+C GKG       +C  C GTG       K         +         CP+CRG G 
Sbjct: 5   CPECGGKGKIVVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGT 64

Query: 200 VISERDKCPQC 210
           V +  D CP+C
Sbjct: 65  V-TVYDTCPEC 74

Length = 715

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 15  YEILGVSKSATEDELKKAYRKAAMKNHPDKG---GDPEKF--------KELGQAYE 59
            ++LGV   A +D +KKAYRK   + HPDK    G   +F        +E+ +AYE
Sbjct: 116 LKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYE 171

Length = 174

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	334
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.84
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.83
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.8
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.77
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.77
PHA03102	153	Small T antigen; Reviewed	99.75
PRK10767	371	chaperone protein DnaJ; Provisional	99.75
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.74
PRK14288	369	chaperone protein DnaJ; Provisional	99.73
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.71
PRK14279	392	chaperone protein DnaJ; Provisional	99.71
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.7
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.7
PRK14300	372	chaperone protein DnaJ; Provisional	99.7
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.69
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.66
PRK14286	372	chaperone protein DnaJ; Provisional	99.63
PRK14285	365	chaperone protein DnaJ; Provisional	99.63
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.61
PRK14277	386	chaperone protein DnaJ; Provisional	99.6
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.6
PRK14284	391	chaperone protein DnaJ; Provisional	99.58
PRK14282	369	chaperone protein DnaJ; Provisional	99.58
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.58
PRK14301	373	chaperone protein DnaJ; Provisional	99.57
PRK14281	397	chaperone protein DnaJ; Provisional	99.56
PRK14298	377	chaperone protein DnaJ; Provisional	99.54
PRK14297	380	chaperone protein DnaJ; Provisional	99.54
PRK14289	386	chaperone protein DnaJ; Provisional	99.53
PRK14290	365	chaperone protein DnaJ; Provisional	99.53
PRK14294	366	chaperone protein DnaJ; Provisional	99.53
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.53
PTZ00100	116	DnaJ chaperone protein; Provisional	99.52
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	99.51
PRK14293	374	chaperone protein DnaJ; Provisional	99.5
PRK14295	389	chaperone protein DnaJ; Provisional	99.5
PRK14287	371	chaperone protein DnaJ; Provisional	99.49
PRK14278	378	chaperone protein DnaJ; Provisional	99.49
PRK14296	372	chaperone protein DnaJ; Provisional	99.47
PRK14291	382	chaperone protein DnaJ; Provisional	99.47
PRK14276	380	chaperone protein DnaJ; Provisional	99.46
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.46
PRK14280	376	chaperone protein DnaJ; Provisional	99.46
PRK05014	171	hscB co-chaperone HscB; Provisional	99.43
PRK01356	166	hscB co-chaperone HscB; Provisional	99.42
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.42
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.4
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.4
PRK14292	371	chaperone protein DnaJ; Provisional	99.38
PRK03578	176	hscB co-chaperone HscB; Provisional	99.37
PRK00294	173	hscB co-chaperone HscB; Provisional	99.36
PHA02624	647	large T antigen; Provisional	99.33
PRK14283	378	chaperone protein DnaJ; Provisional	99.33
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.31
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.22
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.06
PRK01773	173	hscB co-chaperone HscB; Provisional	98.89
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.89
PLN03165	111	chaperone protein dnaJ-related; Provisional	98.88
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.86
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.78
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.74
PRK14299	291	chaperone protein DnaJ; Provisional	98.73
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.7
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.58
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.51
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.5
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	98.36
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.34
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	98.2
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	98.19
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	98.05
KOG2813	406	consensus Predicted molecular chaperone, contains	97.47
COG1107	715	Archaea-specific RecJ-like exonuclease, contains D	97.4
PLN03165	111	chaperone protein dnaJ-related; Provisional	97.4
KOG2813	406	consensus Predicted molecular chaperone, contains	96.92
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	96.87
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	96.74
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.43
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	95.84
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	94.83
KOG0431	453	consensus Auxilin-like protein and related protein	94.2
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	92.42
PF13446	62	RPT: A repeated domain in UCH-protein	91.49
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	91.49
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	90.1
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	88.5
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	88.24
smart00709	160	Zpr1 Duplicated domain in the epidermal growth fac	86.46
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	83.51
TIGR00310	192	ZPR1_znf ZPR1 zinc finger domain.	81.38
PRK14714	1337	DNA polymerase II large subunit; Provisional	81.28
PRK04023	1121	DNA polymerase II large subunit; Validated	81.09

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.1e-86  Score=618.22  Aligned_cols=314  Identities=40%  Similarity=0.716  Sum_probs=277.5

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-Ch---HHHHHHHHHHhhcCCCcccchhcccChhhhhc-CCC
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGG-DP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE-GMG   83 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~-~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~-~~~   83 (334)
                      +..+|||+||||+++||.+|||+|||+||++||||+|+ ++   ++|++|++||||||||+||++||+||++++++ +++
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g   80 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG   80 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence            46789999999999999999999999999999999999 53   89999999999999999999999999999863 322


Q ss_pred             CC--CCCC-CcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC
Q 019908           84 GA--GAAH-NPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA  160 (334)
Q Consensus        84 ~~--~~~~-~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~  160 (334)
                      ++  +++. ++.|||++|||++++   ++++..+++++.|+.+.++|||+|++.|+++++.+++.+.|++|+|+|...++
T Consensus        81 g~g~~~fgg~~~DIF~~~FgGg~~---~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt  157 (371)
T COG0484          81 GFGFGGFGGDFGDIFEDFFGGGGG---GRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGT  157 (371)
T ss_pred             CCCcCCCCCCHHHHHHHhhcCCCc---ccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCC
Confidence            21  1122 588999999974322   22233456789999999999999999999999999999999999999999985


Q ss_pred             -cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          161 -LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       161 -~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                       ..+|++|+|+|.+...+++   .+++++++|+.|+|+|+++.  ++|++|+|.|++.+.++++|+||+|+.+|++|+++
T Consensus       158 ~~~tC~tC~G~G~v~~~~~~---g~~~~~~~C~~C~G~G~~i~--~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~  232 (371)
T COG0484         158 DPKTCPTCNGSGQVRTVQRT---GFFSFQQTCPTCNGTGKIIK--DPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLS  232 (371)
T ss_pred             CCCcCCCCCCcCeEEEEEee---eEEEEEEECCCCccceeECC--CCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEe
Confidence             6789999999999887777   34456799999999999996  99999999999999999999999999999999999


Q ss_pred             cCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++.+ ++++|||||+|.|++|+.|.|+|+|||++++|++.+|+||+++.||||||+ +.|+||+|++  +|...   
T Consensus       233 g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq--~G~~~rl~  309 (371)
T COG0484         233 GEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQ--TGEVFRLR  309 (371)
T ss_pred             cCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCc--cCcEEEEc
Confidence            9999985 667899999999999999999999999999999999999999999999999 9999999853  34322   


Q ss_pred             -------CCCCCccEEEEEEEEEee
Q 019908          316 -------DNFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       316 -------~~~~~GdL~v~~~V~~p~  333 (334)
                             ++..+|||||+++|++|-
T Consensus       310 gkG~p~~~~~~~GDl~v~v~v~~P~  334 (371)
T COG0484         310 GKGMPKLRSGGRGDLYVRVKVETPK  334 (371)
T ss_pred             CCCccccCCCCcCCEEEEEEEEcCC
Confidence                   345679999999999994

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=6.5e-80  Score=596.54  Aligned_cols=316  Identities=47%  Similarity=0.889  Sum_probs=286.0

Q ss_pred             CCCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC
Q 019908            5 TPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG   84 (334)
Q Consensus         5 ~~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~   84 (334)
                      ..+.+..+|||++|||+++||.+|||+|||+||++||||+|+++++|++|++||++|+||++|++||+||++++..+.  
T Consensus        21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~--   98 (421)
T PTZ00037         21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE--   98 (421)
T ss_pred             ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC--
Confidence            334566889999999999999999999999999999999999889999999999999999999999999988765321  


Q ss_pred             CCCCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccC
Q 019908           85 AGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKC  164 (334)
Q Consensus        85 ~~~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C  164 (334)
                        ++.+++++|+.|||++.     .  ..+..++.|+.+.|.+||+|+|+|+++++.+.+.+.|+.|+|+|.......+|
T Consensus        99 --~~~d~~d~f~~~Fggg~-----~--~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C  169 (421)
T PTZ00037         99 --QPADASDLFDLIFGGGR-----K--PGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC  169 (421)
T ss_pred             --CCcchhhhHHHhhcccc-----c--cccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccC
Confidence              22457789999997421     1  12235688999999999999999999999999999999999999877767789


Q ss_pred             CCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCC
Q 019908          165 YGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE  244 (334)
Q Consensus       165 ~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~  244 (334)
                      +.|+|+|.++..+++|+ |+++++.+|+.|.|+|+++...++|+.|+|.+++.+.++++|.||||+.+|++|+|+|+|++
T Consensus       170 ~~C~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~  248 (421)
T PTZ00037        170 KLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADE  248 (421)
T ss_pred             CCCCCCCeEEEEEeecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCC
Confidence            99999999988888888 88888999999999999998789999999999999999999999999999999999999999


Q ss_pred             CCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------CC-
Q 019908          245 APDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------DN-  317 (334)
Q Consensus       245 ~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~~-  317 (334)
                      .+++.+|||||+|++++|+.|+|+|+|||++++|+|.|||+|+++.|+||||+.|.|+||+|++++||.++      +| 
T Consensus       249 ~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~  328 (421)
T PTZ00037        249 KPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPT  328 (421)
T ss_pred             CCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCccc
Confidence            88889999999999999999999999999999999999999999999999999899999999888888754      22 


Q ss_pred             ----CCCccEEEEEEEEEe
Q 019908          318 ----FTSVNLYLHEYCFLW  332 (334)
Q Consensus       318 ----~~~GdL~v~~~V~~p  332 (334)
                          +.+|||||+|+|+||
T Consensus       329 ~~~~~~rGDL~V~~~V~~P  347 (421)
T PTZ00037        329 YKSPFKKGNLYVTFEVIFP  347 (421)
T ss_pred             CCCCCCCCCEEEEEEEEcC
Confidence                358999999999999

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.8e-76  Score=567.25  Aligned_cols=310  Identities=30%  Similarity=0.555  Sum_probs=268.9

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcC--CCCC
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG--MGGA   85 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~--~~~~   85 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||+||+||++|+.||+||+++++.+  ++++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~   82 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcC
Confidence            57999999999999999999999999999999999754   899999999999999999999999999876531  1110


Q ss_pred             -C------------CCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCC
Q 019908           86 -G------------AAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCK  152 (334)
Q Consensus        86 -~------------~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~  152 (334)
                       +            ++.+|.|+|++|||++.     + ..+++.++.|+.+.+.+||+|+|+|+.+++.+.+.+.|++|+
T Consensus        83 ~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~-----~-~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~  156 (372)
T PRK14296         83 FGDFEDLFSNMGSSGFSSFTNIFSDFFGSNK-----S-DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCF  156 (372)
T ss_pred             CCccccccccccccccccchhhhhhhcCCCc-----c-CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCC
Confidence             1            11234467788876321     1 112345688999999999999999999999999999999999


Q ss_pred             CCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCcc
Q 019908          153 GKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQ  231 (334)
Q Consensus       153 G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~  231 (334)
                      |+|..... ..+|+.|+|+|.++..+++|+ |+++.+.+|+.|.|+|+++.  .+|+.|+|.+++.+.++++|+||||++
T Consensus       157 G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~  233 (372)
T PRK14296        157 GSGAESNSDIHICNNCHGTGEVLVQKNMGF-FQFQQSAKCNVCNGAGKIIK--NKCKNCKGKGKYLERKKIEVNIPKGIR  233 (372)
T ss_pred             CCccCCCCCCccCCCCCCCceEEEEEeccc-eEEEEEecCCCcCCcceeec--ccccCCCCceEEEEEEEEEEEECCCCC
Confidence            99998765 467999999999999888888 45567899999999999986  899999999999999999999999999


Q ss_pred             CCcEEEEecCcCCC-CCCCCcCEEEEEEEEeCCCceee-cCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCcee
Q 019908          232 HGQKIAFEGQADEA-PDTITGDIVFILQLKEHPKFKRK-FDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEII  309 (334)
Q Consensus       232 ~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~-g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i  309 (334)
                      +|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+ |+|||++++|||.|||+|+++.|+||||+ +.|+||++  +
T Consensus       234 ~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--t  310 (372)
T PRK14296        234 PNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKS--I  310 (372)
T ss_pred             CCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCc--c
Confidence            99999999999987 46789999999999999999996 89999999999999999999999999998 88999875  4


Q ss_pred             cCCccc------C-----CCCCccEEEEEEEEEe
Q 019908          310 KPGIYF------D-----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       310 ~~g~~~------~-----~~~~GdL~v~~~V~~p  332 (334)
                      ++|.+.      +     ++.+|||||+|+|.||
T Consensus       311 ~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P  344 (372)
T PRK14296        311 NSNELIIINNKGLYKSINKDKRGDLIIKVNIVVP  344 (372)
T ss_pred             CCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECC
Confidence            555433      2     2468999999999999

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-76  Score=564.23  Aligned_cols=310  Identities=27%  Similarity=0.535  Sum_probs=263.7

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCC
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAG   86 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~   86 (334)
                      ..|||+||||+++||.+|||+|||+||++||||+|++ +   ++|++|++||+||+||++|++||+||+++++.+.++.+
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~~~   81 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS   81 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCCcc
Confidence            4799999999999999999999999999999999983 2   79999999999999999999999999987753211111


Q ss_pred             CCCCcc----hhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcc
Q 019908           87 AAHNPF----DIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALG  162 (334)
Q Consensus        87 ~~~~~~----d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~  162 (334)
                      ++.++|    ++|++|||+++    .++...++.++.|+.+.|++||+|+|.|+++++.+.+.+.|+.|+|+|.......
T Consensus        82 ~~~~~f~~~~~~F~~~fg~g~----~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~  157 (369)
T PRK14288         82 DFSDFFEDLGSFFEDAFGFGA----RGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALE  157 (369)
T ss_pred             ccccchhhHHHHHHhhcCCCC----cccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCc
Confidence            222333    35555554211    0111122356889999999999999999999999999999999999999877677


Q ss_pred             cCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCc
Q 019908          163 KCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQA  242 (334)
Q Consensus       163 ~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G  242 (334)
                      +|+.|+|+|.+....    |++ +++++|+.|.|+|+++.  .+|+.|+|.+++.+.++++|.||||+++|++|+|+|+|
T Consensus       158 ~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G  230 (369)
T PRK14288        158 TCKQCNGQGQVFMRQ----GFM-SFAQTCGACQGKGKIIK--TPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKG  230 (369)
T ss_pred             CCCCCCCCcEEEEEe----ceE-EEEEecCCCCCCceEcc--ccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCc
Confidence            899999999876533    455 45679999999999986  88999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------C
Q 019908          243 DEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------D  316 (334)
Q Consensus       243 ~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~  316 (334)
                      ++.+++.+|||+|+|+|++|+.|+|+|+|||++++|||.|||+|+++.|+||||+.+.|+||++  +++|.+.      +
T Consensus       231 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~--~~~g~~~~i~g~G~  308 (369)
T PRK14288        231 NEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRN--ARDRQTFAFRNEGV  308 (369)
T ss_pred             cCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCC--CCCCcEEEEcCCCC
Confidence            9988888999999999999999999999999999999999999999999999999889999875  4565533      2


Q ss_pred             C----CCCccEEEEEEEEEee
Q 019908          317 N----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       317 ~----~~~GdL~v~~~V~~p~  333 (334)
                      |    ..+|||||+|+|+||-
T Consensus       309 p~~~~~~~GDL~v~~~v~~P~  329 (369)
T PRK14288        309 KHPESSYRGSLIVELQVIYPK  329 (369)
T ss_pred             CCCCCCCCCCEEEEEEEECCC
Confidence            2    3479999999999993

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-74  Score=555.02  Aligned_cols=314  Identities=34%  Similarity=0.607  Sum_probs=271.3

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC-
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG-   84 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~-   84 (334)
                      +..+|||+||||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||.+|+.||+||+++++.++++ 
T Consensus         2 ~~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~   81 (377)
T PRK14298          2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAE   81 (377)
T ss_pred             CCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcc
Confidence            3467999999999999999999999999999999999754   799999999999999999999999998877643211 


Q ss_pred             ----CCCCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC
Q 019908           85 ----AGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA  160 (334)
Q Consensus        85 ----~~~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~  160 (334)
                          ++++.++.|+|++|||+++    +. ..+++.++.|+.+.|++||+|+|+|+++++.+.+.+.|+.|+|+|...+.
T Consensus        82 ~~~~~~~~~~~~d~f~~~Fgg~~----~~-~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  156 (377)
T PRK14298         82 DIFRGADFGGFGDIFEMFFGGGG----RR-GRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGT  156 (377)
T ss_pred             cccccCCcCcchhhhHhhhcCCC----cc-CCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCC
Confidence                1122345688999997421    11 11234578899999999999999999999999999999999999998776


Q ss_pred             c-ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          161 L-GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       161 ~-~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                      . .+|+.|+|+|.++..+++++| +++++.+|+.|.|+|+++.  .+|+.|+|.+++.+.++++|.||||+++|++|+|+
T Consensus       157 ~~~~C~~C~G~G~~~~~~~~~~g-~~~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~  233 (377)
T PRK14298        157 SPKRCPTCGGTGQVTTTRSTPLG-QFVTTTTCSTCHGRGQVIE--SPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLS  233 (377)
T ss_pred             CCCcCCCCCCccEEEEEEecCce-eEEEEEeCCCCCCCCcccC--CCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEe
Confidence            4 679999999999888775444 4568899999999999886  89999999999999999999999999999999999


Q ss_pred             cCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++. +++.+|||||+|++++|+.|+|+|+||++++.|||.|||+|+++.|+||||+ +.|+||++  ++++...   
T Consensus       234 g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g--~~~g~~lri~  310 (377)
T PRK14298        234 GEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPG--TQTHSVFRLK  310 (377)
T ss_pred             cccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCC--cccCCEEEEC
Confidence            999986 5678999999999999999999999999999999999999999999999998 78999986  3455432   


Q ss_pred             ---CC----CCCccEEEEEEEEEee
Q 019908          316 ---DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       316 ---~~----~~~GdL~v~~~V~~p~  333 (334)
                         +|    ..+|||||+|+|.||-
T Consensus       311 g~G~p~~~~~~~GDL~V~~~V~~P~  335 (377)
T PRK14298        311 DKGMPRLHGHGKGDQLVKVIVKTPT  335 (377)
T ss_pred             CCCCCCCCCCCCCCEEEEEEEECCC
Confidence               22    3479999999999993

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-74  Score=554.70  Aligned_cols=315  Identities=35%  Similarity=0.663  Sum_probs=267.6

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC-
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG-   84 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~-   84 (334)
                      .++|||++|||+++|+.+|||+|||+||++||||+|++.    ++|++|++||+||+||++|++||+||+++++.+.++ 
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~   81 (372)
T PRK14286          2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGF   81 (372)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCC
Confidence            357999999999999999999999999999999999732    899999999999999999999999999887632111 


Q ss_pred             -CCC-------CCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCC
Q 019908           85 -AGA-------AHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGS  156 (334)
Q Consensus        85 -~~~-------~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~  156 (334)
                       .++       +.++.|+|++|||+++.++..+.......++.|+.+.|++||+|+|+|+++++.+++.+.|++|+|+|.
T Consensus        82 ~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~  161 (372)
T PRK14286         82 GQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGA  161 (372)
T ss_pred             CCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCc
Confidence             111       124558899999742111000111123456889999999999999999999999999999999999999


Q ss_pred             ccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcE
Q 019908          157 KSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQK  235 (334)
Q Consensus       157 ~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~  235 (334)
                      .... ..+|+.|+|+|.++...    |+++ ++++|+.|.|+|+++.  ++|+.|+|.+++.+.++++|+||||+++|++
T Consensus       162 ~~~~~~~~C~~C~G~G~v~~~~----G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~  234 (372)
T PRK14286        162 SKGSSPTTCPDCGGSGQIRRTQ----GFFS-VATTCPTCRGKGTVIS--NPCKTCGGQGLQEKRRTINIKIPPGVETGSR  234 (372)
T ss_pred             CCCCCCccCCCCcCeEEEEEEe----ceEE-EEEeCCCCCceeeEec--ccCCCCCCCcEEecceEEEEEECCCCCCCCE
Confidence            8765 46799999999876542    5664 6789999999999986  8999999999999999999999999999999


Q ss_pred             EEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCcc
Q 019908          236 IAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIY  314 (334)
Q Consensus       236 i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~  314 (334)
                      |+|+|+|++.+ +..+|||||+|+|++|+.|+|+|+||++++.|+|.+||+|+++.|+||||+.+.|+||++  +++|.+
T Consensus       235 i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g--~~~g~~  312 (372)
T PRK14286        235 LKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEG--TESGQV  312 (372)
T ss_pred             EEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCc--cCCCcE
Confidence            99999999876 456799999999999999999999999999999999999999999999999899999976  456553


Q ss_pred             c------CC----CCCccEEEEEEEEEee
Q 019908          315 F------DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       315 ~------~~----~~~GdL~v~~~V~~p~  333 (334)
                      .      +|    ..+|||||+|+|.||-
T Consensus       313 ~ri~G~G~P~~~~~~~GDL~V~~~V~~P~  341 (372)
T PRK14286        313 FRLKGHGMPYLGAYGKGDQHVIVKIEIPK  341 (372)
T ss_pred             EEECCCCCCCCCCCCCCcEEEEEEEECCC
Confidence            3      22    3579999999999993

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.1e-74  Score=551.09  Aligned_cols=312  Identities=32%  Similarity=0.636  Sum_probs=272.2

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCC--
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGA--   85 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~--   85 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||++|++||+||+++++.+++++  
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA   82 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCCC
Confidence            47999999999999999999999999999999999753   7999999999999999999999999998776432211  


Q ss_pred             CCCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC-cccC
Q 019908           86 GAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKC  164 (334)
Q Consensus        86 ~~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~-~~~C  164 (334)
                      +++.++.|+|++|||+++    +.+..+.+.++.|+.+.+.+||+|+|.|+.+++.+.+.+.|+.|+|+|..... ..+|
T Consensus        83 ~~f~~~~d~f~~~fgg~~----~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C  158 (371)
T PRK14287         83 GDFGGFSDIFDMFFGGGG----GRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETC  158 (371)
T ss_pred             ccccchHHHHHhhhcccc----CCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCccc
Confidence            122345689999997421    11111223568899999999999999999999999999999999999988765 4679


Q ss_pred             CCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCC
Q 019908          165 YGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE  244 (334)
Q Consensus       165 ~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~  244 (334)
                      +.|+|+|.+...+++++|++++ +.+|+.|.|+|+++.  .+|+.|.|.+++.+.++++|.||||+++|++|+|+|+|++
T Consensus       159 ~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~  235 (371)
T PRK14287        159 SHCGGSGQLNVEQNTPFGRVVN-RRVCHHCEGTGKIIK--QKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEA  235 (371)
T ss_pred             CCCCCEEEEEEEEecCCceEEE-EEeCCCCCCCCcccc--ccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcC
Confidence            9999999999999999999886 789999999999986  8899999999999999999999999999999999999998


Q ss_pred             CC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------CC
Q 019908          245 AP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------DN  317 (334)
Q Consensus       245 ~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~~  317 (334)
                      .+ ++.+|||+|+|++++|+.|+|+|+||++++.|||.+||+|+++.|+||||+ +.|+||++  ++++...      +|
T Consensus       236 ~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g--~~~g~~~ri~g~G~p  312 (371)
T PRK14287        236 GVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAG--TQTGTSFRLRGKGVP  312 (371)
T ss_pred             CCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCC--ccCCcEEEEcCCCcc
Confidence            74 557899999999999999999999999999999999999999999999998 88999986  3455432      22


Q ss_pred             ----CCCccEEEEEEEEEe
Q 019908          318 ----FTSVNLYLHEYCFLW  332 (334)
Q Consensus       318 ----~~~GdL~v~~~V~~p  332 (334)
                          ..+|||||+|+|.+|
T Consensus       313 ~~~~~~~GDL~V~~~v~~P  331 (371)
T PRK14287        313 NVHGRGQGDQHVQVRVVTP  331 (371)
T ss_pred             CCCCCCCCCEEEEEEEEcC
Confidence                347999999999999

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.9e-74  Score=552.56  Aligned_cols=312  Identities=34%  Similarity=0.615  Sum_probs=272.7

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC---
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG---   84 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~---   84 (334)
                      ++|||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||++|++||+||+++++.++++   
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~   82 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG   82 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence            57999999999999999999999999999999999764   899999999999999999999999999887643211   


Q ss_pred             C-C------CCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCc
Q 019908           85 A-G------AAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK  157 (334)
Q Consensus        85 ~-~------~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~  157 (334)
                      + +      ++.++.|+|++|||+++    +.+....+.++.|+.+.|.+||+|+|+|+++++.+.+.+.|+.|+|+|..
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~~----~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~  158 (380)
T PRK14276         83 GFGGFDGSGGFGGFEDIFSSFFGGGG----ARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAK  158 (380)
T ss_pred             CCCCccccccccchhhHHHHHhCccc----cccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccC
Confidence            0 1      12345688999997421    11112233568899999999999999999999999999999999999998


Q ss_pred             cCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEE
Q 019908          158 SGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKI  236 (334)
Q Consensus       158 ~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i  236 (334)
                      ... ..+|+.|+|+|.+...+++++|++++ +.+|+.|.|+|+++.  .+|+.|+|.+++.+.++++|.||+|+++|++|
T Consensus       159 ~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i  235 (380)
T PRK14276        159 PGTSPVTCGKCHGSGVITVDTQTPLGMMRR-QVTCDVCHGTGKEIK--EPCQTCHGTGHEKQAHTVSVKIPAGVETGQQI  235 (380)
T ss_pred             CCCCCccCCCCCCeeEEEEEEecCCceEEE-EEECCCCCCCCcccc--CCCCCCCCceEEEEEEEEEEEeCCCccCCcEE
Confidence            765 46799999999999999999999986 779999999999986  89999999999999999999999999999999


Q ss_pred             EEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc
Q 019908          237 AFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF  315 (334)
Q Consensus       237 ~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~  315 (334)
                      +|+|+|++.+ +..+|||+|+|+|++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+||++  +++|...
T Consensus       236 ~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g--~~~g~~~  312 (380)
T PRK14276        236 RLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAG--TQTGKKF  312 (380)
T ss_pred             EEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCC--CCCCCEE
Confidence            9999999875 456799999999999999999999999999999999999999999999998 78999976  3555433


Q ss_pred             ------C----CCCCccEEEEEEEEEe
Q 019908          316 ------D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ------~----~~~~GdL~v~~~V~~p  332 (334)
                            +    ...+|||||+|+|.||
T Consensus       313 ~i~g~G~p~~~~~~~GDL~V~~~v~~P  339 (380)
T PRK14276        313 RLRGKGAPKLRGGGNGDQHVTVNIVTP  339 (380)
T ss_pred             EECCCCcCCCCCCCCCCEEEEEEEECC
Confidence                  2    2357999999999999

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.9e-74  Score=552.59  Aligned_cols=318  Identities=34%  Similarity=0.627  Sum_probs=271.4

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcC-CC
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG-MG   83 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~-~~   83 (334)
                      ++.+|||+||||+++|+.+|||+|||+||++||||+|++.    ++|++|++||++|+|+.+|+.||+||+++++.+ ++
T Consensus         2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~   81 (386)
T PRK14277          2 AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFG   81 (386)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccc
Confidence            3457999999999999999999999999999999999842    799999999999999999999999998876532 11


Q ss_pred             CC----CC---------CCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCC
Q 019908           84 GA----GA---------AHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPK  150 (334)
Q Consensus        84 ~~----~~---------~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~  150 (334)
                      ++    ++         +.++.|+|++||++. |+++..+..+++.++.|+.+.|.+||+|+|+|+++++.+++.+.|+.
T Consensus        82 ~~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~-fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~  160 (386)
T PRK14277         82 QGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDF-FGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDV  160 (386)
T ss_pred             cCCcCCCCccccCccccccchhHHHHHhhccc-ccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCC
Confidence            00    01         022346788888632 22111111122457889999999999999999999999999999999


Q ss_pred             CCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccC
Q 019908          151 CKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKG  229 (334)
Q Consensus       151 C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G  229 (334)
                      |+|+|..... ..+|+.|+|+|.++..+++++|++++. .+|+.|.|+|+++.  .+|+.|+|.+++.+.+.++|.||||
T Consensus       161 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~-~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G  237 (386)
T PRK14277        161 CKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNI-RTCDRCHGEGKIIT--DPCNKCGGTGRIRRRRKIKVNIPAG  237 (386)
T ss_pred             CCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEE-EECCCCCcceeecc--CCCCCCCCCcEEeeeeEEEEecCCC
Confidence            9999998665 567999999999999999999998875 79999999999986  8999999999999999999999999


Q ss_pred             ccCCcEEEEecCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCce
Q 019908          230 MQHGQKIAFEGQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI  308 (334)
Q Consensus       230 ~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~  308 (334)
                      +++|++|+|+|+|++. .+..+|||+|+|+|++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+||++  
T Consensus       238 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g--  314 (386)
T PRK14277        238 IDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEG--  314 (386)
T ss_pred             ccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCC--
Confidence            9999999999999985 3567899999999999999999999999999999999999999999999998 78999887  


Q ss_pred             ecCCccc------CC----CCCccEEEEEEEEEee
Q 019908          309 IKPGIYF------DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       309 i~~g~~~------~~----~~~GdL~v~~~V~~p~  333 (334)
                      +++|...      +|    ..+|||||+|+|.||-
T Consensus       315 ~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~  349 (386)
T PRK14277        315 TQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPK  349 (386)
T ss_pred             CCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            3455433      22    3579999999999993

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-73  Score=548.49  Aligned_cols=312  Identities=34%  Similarity=0.666  Sum_probs=271.5

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCC-
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAG-   86 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~-   86 (334)
                      .+|||+||||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||.+|++||+||+++++.++++++ 
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~~   82 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF   82 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCCC
Confidence            47999999999999999999999999999999999754   89999999999999999999999999987764321111 


Q ss_pred             ---C---CCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC
Q 019908           87 ---A---AHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA  160 (334)
Q Consensus        87 ---~---~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~  160 (334)
                         +   ++++.|+|++|||+++.    .+..+.+.++.|+.+.|.+||+|+|+|+++++.+.+.+.|+.|+|+|.....
T Consensus        83 ~~~~~~~~~~~~d~f~~~fgg~~~----~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  158 (376)
T PRK14280         83 GGGDFGGGFGFEDIFSSFFGGGGR----RRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGT  158 (376)
T ss_pred             CCCCccccccchhhHHHHhCCccc----cCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCC
Confidence               1   12466889999974211    1111223568899999999999999999999999999999999999998765


Q ss_pred             -cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          161 -LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       161 -~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                       ..+|+.|+|+|.+...+++++|++++ +.+|+.|.|+|+++.  .+|+.|+|++++.+.++++|.||+|+++|++|+|+
T Consensus       159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~  235 (376)
T PRK14280        159 SKETCSHCGGSGQVSVEQNTPFGRVVN-RQTCPHCNGTGQEIK--EKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVS  235 (376)
T ss_pred             CCccCCCCCCEEEEEEEeecCCceEEE-EEEcCCCCCCCceec--CCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEc
Confidence             46799999999999888999999874 789999999999986  89999999999999999999999999999999999


Q ss_pred             cCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++.+ ++.+|||+|+|++++|+.|+|+|+||++++.|||.|||+|+++.|+||||+ +.|+||++  ++++...   
T Consensus       236 G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g--~~~g~~~~i~  312 (376)
T PRK14280        236 GEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAG--TQTGTQFRLK  312 (376)
T ss_pred             ccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCC--CCCCcEEEEc
Confidence            9999864 457899999999999999999999999999999999999999999999997 78999986  3455432   


Q ss_pred             ---C----CCCCccEEEEEEEEEe
Q 019908          316 ---D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ---~----~~~~GdL~v~~~V~~p  332 (334)
                         +    ...+|||||+|+|.||
T Consensus       313 g~G~p~~~~~~~GDL~v~~~v~~P  336 (376)
T PRK14280        313 GKGVPNVRGYGQGDQYVVVRVVTP  336 (376)
T ss_pred             CCCCCCCCCCCCCCEEEEEEEECC
Confidence               2    2357999999999999

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-73  Score=545.93  Aligned_cols=313  Identities=34%  Similarity=0.588  Sum_probs=269.8

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCC-CCC-C
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGM-GGA-G   86 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~-~~~-~   86 (334)
                      +|||+||||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+|+++|++||+||++....+. +++ +
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g~~   82 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGFG   82 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCCCC
Confidence            6999999999999999999999999999999999874   7999999999999999999999999976432111 010 1


Q ss_pred             -CCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC-cccC
Q 019908           87 -AAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKC  164 (334)
Q Consensus        87 -~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~-~~~C  164 (334)
                       ++.++.|+|++|||+++  + +........++.|+.+.|.+||+|+|.|+++++.+++.+.|+.|+|+|..... ..+|
T Consensus        83 ~~f~~~~d~f~~ffgg~g--~-~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C  159 (378)
T PRK14278         83 GGFGGLGDVFEAFFGGGA--A-SRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTC  159 (378)
T ss_pred             cCcCchhHHHHHHhCCCC--C-CCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceec
Confidence             12345688999997421  1 11111123568899999999999999999999999999999999999998765 4679


Q ss_pred             CCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCC
Q 019908          165 YGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE  244 (334)
Q Consensus       165 ~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~  244 (334)
                      +.|+|+|.+...+++++|++++ +++|+.|+|+|+++.  ++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|++
T Consensus       160 ~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~  236 (378)
T PRK14278        160 DTCGGRGEVQTVQRSFLGQVMT-SRPCPTCRGVGEVIP--DPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEV  236 (378)
T ss_pred             CCccCceEEEEEEeccceeEEE-EEECCCCCccceeeC--CCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCC
Confidence            9999999998888888888875 569999999999986  8899999999999999999999999999999999999998


Q ss_pred             CCC-CCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------C-
Q 019908          245 APD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------D-  316 (334)
Q Consensus       245 ~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~-  316 (334)
                      .++ +.+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|||+..+.|+||++  +++|...      + 
T Consensus       237 ~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g--~~~g~~lrl~g~G~p  314 (378)
T PRK14278        237 GPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPG--TQPGSVITLRGRGMP  314 (378)
T ss_pred             CCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCC--cCCCcEEEECCCCCC
Confidence            764 56799999999999999999999999999999999999999999999777799999986  4555433      2 


Q ss_pred             ---CCCCccEEEEEEEEEe
Q 019908          317 ---NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       317 ---~~~~GdL~v~~~V~~p  332 (334)
                         ...+|||||+|+|.||
T Consensus       315 ~~~~~~~GDL~V~~~V~~P  333 (378)
T PRK14278        315 HLRSGGRGDLHAHVEVVVP  333 (378)
T ss_pred             CCCCCCCCCEEEEEEEEcC
Confidence               2358999999999999

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.4e-73  Score=544.31  Aligned_cols=316  Identities=30%  Similarity=0.556  Sum_probs=270.5

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCC--
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGM--   82 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~--   82 (334)
                      ..+|||++|||+++|+.+|||+|||+||++||||+|++.     ++|++|++||++|+||++|++||+||++++....  
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~   81 (369)
T PRK14282          2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE   81 (369)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence            357999999999999999999999999999999998742     7999999999999999999999999987764211  


Q ss_pred             -CCCCCC-C----Cc-----chhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCC
Q 019908           83 -GGAGAA-H----NP-----FDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKC  151 (334)
Q Consensus        83 -~~~~~~-~----~~-----~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C  151 (334)
                       ++++++ .    ++     .|+|++|||+++   +..+....+.++.|+.+.+++||+|+|+|+++++.+++.+.|+.|
T Consensus        82 ~~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~---~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C  158 (369)
T PRK14282         82 TESGGGFFEDIFKDFENIFNRDIFDIFFGERR---TQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHC  158 (369)
T ss_pred             CCCCCcccccccccccccccchhhhHhhcccC---CcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCC
Confidence             111111 1    11     167777776321   111111234568999999999999999999999999999999999


Q ss_pred             CCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCc
Q 019908          152 KGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGM  230 (334)
Q Consensus       152 ~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~  230 (334)
                      +|+|..... ..+|+.|+|+|.++..+++++|++++ +++|+.|.|+|+++.  ++|+.|+|.+++.+.++++|+||||+
T Consensus       159 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~  235 (369)
T PRK14282        159 GGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVS-ERTCERCGGTGKIPG--EYCHECGGSGRIRRRVRTTVKIPAGV  235 (369)
T ss_pred             CccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEE-EEECCCCCCcceeCC--CCCCCCCCceeEEEEEEEEEEeCCCC
Confidence            999998765 46799999999999999999999875 679999999999976  89999999999999999999999999


Q ss_pred             cCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCcee
Q 019908          231 QHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEII  309 (334)
Q Consensus       231 ~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i  309 (334)
                      .+|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||++++.|||.||++|+++.|+|+||+.+.|+||++  +
T Consensus       236 ~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g--~  313 (369)
T PRK14282        236 EDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPG--T  313 (369)
T ss_pred             CCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCC--c
Confidence            9999999999999864 567899999999999999999999999999999999999999999999999899999987  4


Q ss_pred             cCCccc------C----CCCCccEEEEEEEEEee
Q 019908          310 KPGIYF------D----NFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       310 ~~g~~~------~----~~~~GdL~v~~~V~~p~  333 (334)
                      +++...      +    ...+|||||+|+|.+|.
T Consensus       314 ~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~  347 (369)
T PRK14282        314 QPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPK  347 (369)
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence            555432      2    23579999999999993

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=8.7e-74  Score=528.33  Aligned_cols=313  Identities=56%  Similarity=0.933  Sum_probs=286.7

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCCCC
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAA   88 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~   88 (334)
                      .+..||+||+|+++|+++|||+|||+||++||||+||++ ++|++|++||||||||++|++||+||+++++.+.++++.+
T Consensus         2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~g~~   81 (337)
T KOG0712|consen    2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGGGFG   81 (337)
T ss_pred             cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCCCCc
Confidence            578899999999999999999999999999999999988 9999999999999999999999999999997654333322


Q ss_pred             CCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCC
Q 019908           89 HNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQ  168 (334)
Q Consensus        89 ~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~  168 (334)
                      .     |++||+.+   +.++   ++..++.|+.+.+.+||+|+|.|.++++.++++.+|+.|+|+|..++...+|+.|.
T Consensus        82 ~-----f~~~F~~g---~~~~---~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~  150 (337)
T KOG0712|consen   82 G-----FSQFFGFG---GNGG---RGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCR  150 (337)
T ss_pred             c-----HHHhccCC---CcCc---cccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCC
Confidence            2     77777622   1121   12223999999999999999999999999999999999999999999888999999


Q ss_pred             CCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCCC
Q 019908          169 GTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDT  248 (334)
Q Consensus       169 G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~  248 (334)
                      |+|..+..++++|||.|+++..|..|+|+|.++..++.|+.|.|.+++.+.+.++|.|++|+.++++|.+.|++++.++.
T Consensus       151 GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~  230 (337)
T KOG0712|consen  151 GSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGT  230 (337)
T ss_pred             CCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCC
Confidence            99999999999999999999999999999999888999999999999999999999999999999999999999999988


Q ss_pred             CCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------CC---CC
Q 019908          249 ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------DN---FT  319 (334)
Q Consensus       249 ~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~~---~~  319 (334)
                      .+||+++.|..++|+.|.|+++||++..+|+|.||++|+.+.+.||||+.+.+.++||+||+|+.++      ||   ..
T Consensus       231 ~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~  310 (337)
T KOG0712|consen  231 KPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP  310 (337)
T ss_pred             cCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC
Confidence            8999999999999999999999999999999999999999999999999999999999999998765      22   23


Q ss_pred             CccEEEEEEEEEee
Q 019908          320 SVNLYLHEYCFLWL  333 (334)
Q Consensus       320 ~GdL~v~~~V~~p~  333 (334)
                      +|||||+|+|+||-
T Consensus       311 ~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  311 KGDLYIKFEVKFPK  324 (337)
T ss_pred             CCcEEEEEEEEcCC
Confidence            89999999999994

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-72  Score=542.31  Aligned_cols=314  Identities=36%  Similarity=0.675  Sum_probs=271.3

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC-C-
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG-G-   84 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~-~-   84 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+|++.    ++|++|++||++|+||.+|++||+||+++++.+.+ + 
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~   82 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS   82 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence            47999999999999999999999999999999999742    79999999999999999999999999987753211 0 


Q ss_pred             -C-CC-----CCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCc
Q 019908           85 -A-GA-----AHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK  157 (334)
Q Consensus        85 -~-~~-----~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~  157 (334)
                       + ++     ..++.|+|++|||++ +++. ++....+.++.|+.+.|++||+|+|+|+++++.+.+.+.|+.|+|+|..
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~~fgg~-~g~~-~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~  160 (380)
T PRK14297         83 GGFGGFDFSDMGGFGDIFDSFFGGG-FGSS-SRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAK  160 (380)
T ss_pred             CCCCCcCcccccchhHHHHHHhccC-cccc-ccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCccccccc
Confidence             1 11     023568899999742 1111 1111233568899999999999999999999999999999999999998


Q ss_pred             cCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEE
Q 019908          158 SGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKI  236 (334)
Q Consensus       158 ~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i  236 (334)
                      .+. ..+|+.|+|+|.+...+++++|++++ +.+|+.|.|+|+++.  .+|..|+|.|++.+.++++|.||||+++|++|
T Consensus       161 ~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I  237 (380)
T PRK14297        161 PGTSPKTCDKCGGTGQIRVQRNTPLGSFVS-TTTCDKCGGSGKVIE--DPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVI  237 (380)
T ss_pred             CCCcCccCCCccCeEEEEEEEEcCCceeEE-EEeCCCCCCCceEcC--CCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEE
Confidence            765 56799999999999889999998764 789999999999986  89999999999999999999999999999999


Q ss_pred             EEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc
Q 019908          237 AFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF  315 (334)
Q Consensus       237 ~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~  315 (334)
                      +|+|+|++.+ +..+|||||+|+|.+|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ +.|+||++  +++|...
T Consensus       238 ~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g--~~~g~~~  314 (380)
T PRK14297        238 PLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAG--TQPGTVF  314 (380)
T ss_pred             EEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCC--cCCCCEE
Confidence            9999999864 456899999999999999999999999999999999999999999999997 78999987  4565533


Q ss_pred             ------C----CCCCccEEEEEEEEEe
Q 019908          316 ------D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ------~----~~~~GdL~v~~~V~~p  332 (334)
                            +    +..+|||||+|+|.||
T Consensus       315 ri~g~G~p~~~~~~~GDL~v~~~v~~P  341 (380)
T PRK14297        315 RLKGKGVPRVNSTGRGNQYVTVIVDIP  341 (380)
T ss_pred             EEcCCCcCCCCCCCCCcEEEEEEEEcC
Confidence                  2    2357999999999999

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-72  Score=539.74  Aligned_cols=310  Identities=36%  Similarity=0.642  Sum_probs=266.3

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC--C
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG--G   84 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~--~   84 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+|++.    ++|++|++||++|+|+++|+.||+||++++..+.+  +
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~   81 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG   81 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence            37999999999999999999999999999999999742    78999999999999999999999999987753211  1


Q ss_pred             C-CC-------CCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCC
Q 019908           85 A-GA-------AHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGS  156 (334)
Q Consensus        85 ~-~~-------~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~  156 (334)
                      . ++       +.++.|+|++|||++.   + +.+.+.+.++.|+.+.|++||+|+|+|+++++.+++.+.|+.|+|+|.
T Consensus        82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~---~-~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~  157 (365)
T PRK14285         82 FSGGFSGFSDIFEDFGDIFDSFFTGNR---G-QDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKS  157 (365)
T ss_pred             cCCCccccccccccHHHHHHHhhcCCc---C-CCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCccc
Confidence            0 11       1235588999987421   1 101122356889999999999999999999999999999999999999


Q ss_pred             ccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcE
Q 019908          157 KSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQK  235 (334)
Q Consensus       157 ~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~  235 (334)
                      .... ..+|+.|+|+|.++.    ++|++ +++.+|+.|.|+|+++.  ++|+.|+|.+++.+.++++|+||||+++|++
T Consensus       158 ~~~~~~~~C~~C~G~G~~~~----~~G~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~  230 (365)
T PRK14285        158 EKGTSPSICNMCNGSGRVMQ----GGGFF-RVTTTCPKCYGNGKIIS--NPCKSCKGKGSLKKKETIELKIPAGIDDNQQ  230 (365)
T ss_pred             CCCCCCccCCCccCceeEEe----cCcee-EEeeecCCCCCcccccC--CCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence            8765 467999999998764    56777 57899999999999986  8999999999999999999999999999999


Q ss_pred             EEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCcc
Q 019908          236 IAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIY  314 (334)
Q Consensus       236 i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~  314 (334)
                      |+|+|+|++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.+.|+||++  ++++..
T Consensus       231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g--~~~g~~  308 (365)
T PRK14285        231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKG--TENDEQ  308 (365)
T ss_pred             EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCC--cCCCcE
Confidence            999999999764 56899999999999999999999999999999999999999999999999899999986  345543


Q ss_pred             c------CC----CCCccEEEEEEEEEee
Q 019908          315 F------DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       315 ~------~~----~~~GdL~v~~~V~~p~  333 (334)
                      .      +|    ..+|||||+|+|.+|.
T Consensus       309 irl~GkG~p~~~~~~~GDL~V~~~v~~P~  337 (365)
T PRK14285        309 IIIKNEGMPILHTEKFGNLILIIKIKTPK  337 (365)
T ss_pred             EEECCCCccCCCCCCCCCEEEEEEEECCC
Confidence            2      22    2479999999999994

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.3e-72  Score=540.33  Aligned_cols=311  Identities=32%  Similarity=0.571  Sum_probs=258.6

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC-
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG-   83 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~-   83 (334)
                      +..+|||++|||+++|+.+|||+|||+||++||||+|++ +   ++|++|++||+||+||+||++||+||+++...++. 
T Consensus         6 ~~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~   85 (392)
T PRK14279          6 WVEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGG   85 (392)
T ss_pred             hcccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccc
Confidence            346899999999999999999999999999999999983 2   89999999999999999999999999743211110 


Q ss_pred             -------CCCC--------CCCcc---------------hhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeee
Q 019908           84 -------GAGA--------AHNPF---------------DIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLY  133 (334)
Q Consensus        84 -------~~~~--------~~~~~---------------d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~  133 (334)
                             +.++        ..+++               ++|++||+++    +++.+...+.++.|+.+.|+|||+|+|
T Consensus        86 ~~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~----~~~~~~~~~~~g~di~~~l~ltLee~~  161 (392)
T PRK14279         86 RRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRG----GGSARPSRPRRGNDLETETTLDFVEAA  161 (392)
T ss_pred             ccccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCC----CcccccCCCCCCCCeEEEEEEEHHHHh
Confidence                   0001        11222               3344444321    111112234568899999999999999


Q ss_pred             cCcccccccceeeeCCCCCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCC
Q 019908          134 NGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKA  212 (334)
Q Consensus       134 ~G~~~~i~~~~~~~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G  212 (334)
                      +|+++++.+.+.+.|++|+|+|..... ..+|+.|+|+|.++...    |++ +++++|+.|.|+|+++.  .+|+.|+|
T Consensus       162 ~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~-~~~~~C~~C~G~G~~i~--~~C~~C~G  234 (392)
T PRK14279        162 KGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ----GAF-GFSEPCTDCRGTGSIIE--DPCEECKG  234 (392)
T ss_pred             CCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe----cce-EEEEecCCCCceeEEeC--CcCCCCCC
Confidence            999999999999999999999998765 46799999999876643    344 35699999999999986  89999999


Q ss_pred             CceeEEeEEEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEE
Q 019908          213 NKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFAL  291 (334)
Q Consensus       213 ~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i  291 (334)
                      .+++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|+|++|+.|+|+|+||++++.|+|.+|++|+++.|
T Consensus       235 ~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v  314 (392)
T PRK14279        235 TGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSV  314 (392)
T ss_pred             CeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEE
Confidence            9999999999999999999999999999999875 456799999999999999999999999999999999999999999


Q ss_pred             ecCCCCeEEEEcCCCceecCCccc------C---CCCCccEEEEEEEEEee
Q 019908          292 THLDGRQLLIKSNPGEIIKPGIYF------D---NFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       292 ~tldG~~l~v~i~~g~~i~~g~~~------~---~~~~GdL~v~~~V~~p~  333 (334)
                      +||||+ +.|+||++  ++++...      +   ++.+|||||+|+|.||.
T Consensus       315 ~~ldg~-i~v~Ip~g--~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~  362 (392)
T PRK14279        315 PTLDGP-VGVKVPAG--TADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPP  362 (392)
T ss_pred             EcCCce-EEEEECCC--CCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCC
Confidence            999998 88999987  4555433      2   34689999999999993

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-72  Score=540.84  Aligned_cols=316  Identities=35%  Similarity=0.662  Sum_probs=269.6

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCC--CCC
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGM--GGA   85 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~--~~~   85 (334)
                      +|||+||||+++|+.+|||+|||+||++||||+|++.    ++|++|++||++|+|+.+|+.||+||+++++.+.  +++
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~~   82 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG   82 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCCC
Confidence            6999999999999999999999999999999999742    7999999999999999999999999998775321  111


Q ss_pred             C----CCCCcchh---hccccCCCC-CC-----------CCCCCCC--CcccccccEEEeeeeceeeeecCcccccccce
Q 019908           86 G----AAHNPFDI---FESFFGGGT-FG-----------AGGSSRG--RRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSR  144 (334)
Q Consensus        86 ~----~~~~~~d~---f~~~Fg~~~-~~-----------~~~~~~~--~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~  144 (334)
                      +    ++.++.++   |++|||+++ ++           +++....  +.+.++.|+.+.|++||+|+|+|+++++.+++
T Consensus        83 ~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~r  162 (397)
T PRK14281         83 PGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKK  162 (397)
T ss_pred             CCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEEe
Confidence            0    11233444   457887421 00           0110001  12246889999999999999999999999999


Q ss_pred             eeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEE
Q 019908          145 NILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEV  224 (334)
Q Consensus       145 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v  224 (334)
                      .+.|+.|+|+|.......+|+.|+|+|.+....++++|++++ +++|+.|.|+|+++.  ++|+.|+|.+++.+.++++|
T Consensus       163 ~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V  239 (397)
T PRK14281        163 QVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVN-ITACPTCGGEGRVVK--DRCPACYGEGIKQGEVTVKV  239 (397)
T ss_pred             eecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEE-EEecCCCcceeeeeC--CCCCCCCCCccEecceEEEE
Confidence            999999999999887667899999999998888899998875 679999999999986  89999999999999999999


Q ss_pred             EeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEc
Q 019908          225 HVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKS  303 (334)
Q Consensus       225 ~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i  303 (334)
                      +||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||++++.|||.|||+|+++.|+||||+ +.|+|
T Consensus       240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~i  318 (397)
T PRK14281        240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTI  318 (397)
T ss_pred             ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEe
Confidence            9999999999999999999975 467999999999999999999999999999999999999999999999997 88999


Q ss_pred             CCCceecCCccc------CC----CCCccEEEEEEEEEee
Q 019908          304 NPGEIIKPGIYF------DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       304 ~~g~~i~~g~~~------~~----~~~GdL~v~~~V~~p~  333 (334)
                      |++  +++|...      +|    ..+|||||+|+|.||-
T Consensus       319 p~g--~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~  356 (397)
T PRK14281        319 PAG--TQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPK  356 (397)
T ss_pred             CCc--cCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCC
Confidence            987  4565543      22    3579999999999993

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.9e-72  Score=539.10  Aligned_cols=312  Identities=33%  Similarity=0.598  Sum_probs=261.9

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC--CC
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG--GA   85 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~--~~   85 (334)
                      .|||+||||+++|+.+|||+|||+||++||||+|++.    ++|++|++||++|+|+++|+.||+||++++..+.+  ++
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~   80 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG   80 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence            4899999999999999999999999999999999842    79999999999999999999999999887643211  11


Q ss_pred             CCC------------------CCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeee
Q 019908           86 GAA------------------HNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNIL  147 (334)
Q Consensus        86 ~~~------------------~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~  147 (334)
                      +++                  ..+.|+|++||++.+...++.....++.++.|+.+.|.+||+|+|+|+++++.+.+.+.
T Consensus        81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~  160 (391)
T PRK14284         81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS  160 (391)
T ss_pred             CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence            111                  01136677777642110011111122356889999999999999999999999999999


Q ss_pred             CCCCCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEe
Q 019908          148 CPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHV  226 (334)
Q Consensus       148 C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~I  226 (334)
                      |++|+|+|..... ..+|+.|+|+|.++...    |+++ ++.+|+.|.|+|+++.  ++|+.|+|.+++.+.++++|+|
T Consensus       161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~----G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~I  233 (391)
T PRK14284        161 CDACSGSGANSSQGIKVCDRCKGSGQVVQSR----GFFS-MASTCPECGGEGRVIT--DPCSVCRGQGRIKDKRSVHVHI  233 (391)
T ss_pred             CCCCcccccCCCCCCeecCccCCeeEEEEEe----ceEE-EEEECCCCCCCCcccC--CcCCCCCCcceecceEEEEEEE
Confidence            9999999998765 46799999999877533    5554 6789999999999986  8999999999999999999999


Q ss_pred             ccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCC-CCeEEEEcC
Q 019908          227 EKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLD-GRQLLIKSN  304 (334)
Q Consensus       227 p~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tld-G~~l~v~i~  304 (334)
                      |||+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|||.+|++|+++.|+||| |..+.|+||
T Consensus       234 p~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip  313 (391)
T PRK14284        234 PAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIP  313 (391)
T ss_pred             CCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEEC
Confidence            99999999999999999976 5678999999999999999999999999999999999999999999999 667899999


Q ss_pred             CCceecCCccc------C----CCCCccEEEEEEEEEe
Q 019908          305 PGEIIKPGIYF------D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       305 ~g~~i~~g~~~------~----~~~~GdL~v~~~V~~p  332 (334)
                      ++  ++++...      +    ...+|||||+|+|.+|
T Consensus       314 ~g--~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P  349 (391)
T PRK14284        314 EG--IQSGTILKVRGQGFPNVHGKGRGDLLVRISVETP  349 (391)
T ss_pred             Cc--cCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECC
Confidence            76  4555433      2    2357999999999999

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.1e-71  Score=532.69  Aligned_cols=309  Identities=33%  Similarity=0.616  Sum_probs=262.5

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCC
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAG   86 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~   86 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+|++.    ++|++|++||+||+||.+|+.||+||+++++.+.++++
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g   82 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG   82 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence            47999999999999999999999999999999999742    69999999999999999999999999987753211111


Q ss_pred             --C----CCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC
Q 019908           87 --A----AHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA  160 (334)
Q Consensus        87 --~----~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~  160 (334)
                        +    +.+|.|+|++|||+++.  ++. +..++.++.|+.+.|.+||+|+|+|+++++.+.+.+.|+.|+|+|.....
T Consensus        83 ~~~~~~~~~~f~d~f~~~fg~g~~--~~~-~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~  159 (373)
T PRK14301         83 FSSAEDIFSHFSDIFGDLFGFSGG--GSR-RGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGT  159 (373)
T ss_pred             cccccccccchHHHHHHHhhccCc--ccc-cCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCC
Confidence              1    11234677777752211  111 11234578899999999999999999999999999999999999998765


Q ss_pred             -cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          161 -LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       161 -~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                       ..+|+.|+|+|.+...  .  |+++ .+.+|+.|.|+|+++.  ++|+.|+|.+++.+.++++|+||||+++|++|+|+
T Consensus       160 ~~~~C~~C~G~G~v~~~--~--G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~  232 (373)
T PRK14301        160 SPETCRHCGGSGQVRQS--Q--GFFQ-IAVPCPVCRGEGRVIT--HPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLR  232 (373)
T ss_pred             CCcccCCccCeeEEEEE--e--eeEE-EEEeCCCCCceeeecC--CCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEe
Confidence             4679999999987653  2  5554 4899999999999986  89999999999999999999999999999999999


Q ss_pred             cCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|||.+||+|+++.|+||||+ +.|+||++  +++|...   
T Consensus       233 g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g--~~~g~~~ri~  309 (373)
T PRK14301        233 GEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKG--TQSGEVFRLR  309 (373)
T ss_pred             ccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCC--cCCCcEEEEc
Confidence            9999865 567899999999999999999999999999999999999999999999998 89999986  4555433   


Q ss_pred             ---C----CCCCccEEEEEEEEEe
Q 019908          316 ---D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ---~----~~~~GdL~v~~~V~~p  332 (334)
                         +    ...+|||||+|+|.||
T Consensus       310 g~G~p~~~~~~~GDL~I~~~V~~P  333 (373)
T PRK14301        310 GKGLPYLGSSQKGDLLVEVSVVTP  333 (373)
T ss_pred             CCCCCCCCCCCCCCEEEEEEEECC
Confidence               2    2358999999999999

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.8e-71  Score=531.10  Aligned_cols=308  Identities=32%  Similarity=0.612  Sum_probs=259.9

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcc----cChhhhhcC
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQ----YGEDALKEG   81 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~----~G~~~~~~~   81 (334)
                      ..+|||+||||+++|+.+|||+|||+||++||||+|++.    ++|++|++||+||+||.+|++||+    ||++++..+
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            358999999999999999999999999999999999742    899999999999999999999999    998877532


Q ss_pred             CC-C-CCCC-CC--------------------cchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCccc
Q 019908           82 MG-G-AGAA-HN--------------------PFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTK  138 (334)
Q Consensus        82 ~~-~-~~~~-~~--------------------~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~  138 (334)
                      .+ + ++++ .+                    +.|+|++||++     + ++ .++..++.|+.+.|.+||+|+|+|+++
T Consensus        87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~-----~-~~-~~~~~~g~di~~~l~lsLee~~~G~~k  159 (389)
T PRK14295         87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNR-----G-GR-RTQPRRGADVESEVTLSFTEAIDGATV  159 (389)
T ss_pred             CCCCCCCCCCcccccccccccccccccccccchhhhhcccccC-----C-CC-CCCCCCCCCEEEEEEEEHHHHhCCceE
Confidence            11 1 0110 11                    12333333331     1 11 123356889999999999999999999


Q ss_pred             ccccceeeeCCCCCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeE
Q 019908          139 KLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQ  217 (334)
Q Consensus       139 ~i~~~~~~~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~  217 (334)
                      ++.+++.+.|++|+|+|..... ..+|+.|+|+|.++...    |+++ ++.+|+.|.|+|+++.  ++|+.|.|.+++.
T Consensus       160 ~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~~~  232 (389)
T PRK14295        160 PLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS----GGFS-LSEPCPDCKGRGLIAD--DPCLVCKGSGRAK  232 (389)
T ss_pred             EEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe----cceE-EEEecCCCcceeEEec--cCCCCCCCCceEe
Confidence            9999999999999999998765 46799999999887643    3343 5689999999999986  8999999999999


Q ss_pred             EeEEEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCC
Q 019908          218 EKKVLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDG  296 (334)
Q Consensus       218 ~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG  296 (334)
                      +.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||||
T Consensus       233 ~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG  312 (389)
T PRK14295        233 SSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGG  312 (389)
T ss_pred             eeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCC
Confidence            99999999999999999999999999864 56789999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEcCCCceecCCccc---------CCCCCccEEEEEEEEEee
Q 019908          297 RQLLIKSNPGEIIKPGIYF---------DNFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       297 ~~l~v~i~~g~~i~~g~~~---------~~~~~GdL~v~~~V~~p~  333 (334)
                      +.+.|+||++  +++|...         .++.+|||||+|+|.||-
T Consensus       313 ~~~~v~ip~g--~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~  356 (389)
T PRK14295        313 PPVTVKLPPG--TPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPK  356 (389)
T ss_pred             CEEEEEECCc--cCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCC
Confidence            8899999986  4555433         234589999999999993

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.4e-71  Score=529.97  Aligned_cols=311  Identities=32%  Similarity=0.577  Sum_probs=264.4

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---HHHHHHHHHHhhcCCCcccchhcccChhhhhcC-CCC
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG-MGG   84 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~-~~~   84 (334)
                      ..+|||++|||+++|+.+|||+|||+||++||||+|++ +   ++|++|++||++|+||.+|+.||+||+++++.+ +++
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~   81 (366)
T PRK14294          2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG   81 (366)
T ss_pred             CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCC
Confidence            45899999999999999999999999999999999984 2   799999999999999999999999999877532 111


Q ss_pred             CCCC----CCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC
Q 019908           85 AGAA----HNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA  160 (334)
Q Consensus        85 ~~~~----~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~  160 (334)
                      .+++    .++.|+|++|||.++.+  +.+......++.|+.+.|.+||+|+|.|+.+++.+.+.+.|+.|+|+|.....
T Consensus        82 ~~~~~~~~~~~~d~f~~~fg~g~~~--~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  159 (366)
T PRK14294         82 FSGFDDIFSSFGDIFEDFFGFGGGR--RGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGT  159 (366)
T ss_pred             cCccccchhhhhhhHHHhhccCCCc--CCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCC
Confidence            1111    23457888888611110  11111223568899999999999999999999999999999999999998765


Q ss_pred             -cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          161 -LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       161 -~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                       ..+|+.|+|+|.++...    |++| ++++|+.|.|+|+++.  ++|+.|+|.+++.+.++++|.||||+++|++|+|+
T Consensus       160 ~~~~C~~C~G~G~~~~~~----G~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~  232 (366)
T PRK14294        160 SPTTCPQCGGSGQVTQSQ----GFFS-IRTTCPRCRGMGKVIV--SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLR  232 (366)
T ss_pred             CcccCCCcCCeEEEEEEe----eeEE-EEeeCCCCCCcCeecC--cCCCCCCCceEeecceeEEEecCCCCcCCcEEEEc
Confidence             46799999999876432    5664 6899999999999986  89999999999999999999999999999999999


Q ss_pred             cCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++. .++.+|||+|+|++++|+.|+|+|+||++++.|||.+||+|+++.|+||||+ +.|.||++  +++|...   
T Consensus       233 g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g--~~~g~~iri~  309 (366)
T PRK14294        233 GEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKG--TQPGDIFRFK  309 (366)
T ss_pred             cCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCC--cCCCCEEEEC
Confidence            999986 4567899999999999999999999999999999999999999999999997 68999886  4555433   


Q ss_pred             ---CC----CCCccEEEEEEEEEe
Q 019908          316 ---DN----FTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ---~~----~~~GdL~v~~~V~~p  332 (334)
                         ++    ..+|||||+|+|.+|
T Consensus       310 G~G~p~~~~~~~GDL~V~~~v~~P  333 (366)
T PRK14294        310 GKGIPSLRGGGRGDQIIEVEVKVP  333 (366)
T ss_pred             CCCCCCCCCCCCCCEEEEEEEECC
Confidence               22    357999999999999

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=6.5e-71  Score=527.68  Aligned_cols=312  Identities=38%  Similarity=0.697  Sum_probs=270.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC-CC--
Q 019908           13 KYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG-AG--   86 (334)
Q Consensus        13 ~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~-~~--   86 (334)
                      |||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+|+.+|++||+||+++++.+.++ ++  
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~   80 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF   80 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence            799999999999999999999999999999999743   799999999999999999999999999877532111 11  


Q ss_pred             ------CCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC
Q 019908           87 ------AAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA  160 (334)
Q Consensus        87 ------~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~  160 (334)
                            ++.++.++|++|||++. ++ +.++.....++.|+.+.|.+||+|+|+|+++++.+++.+.|+.|+|+|.....
T Consensus        81 ~~~~~~~~~~~~~~f~~~fg~~~-g~-~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  158 (354)
T TIGR02349        81 NGFDIGFFGDFGDIFGDFFGGGG-GS-GRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGT  158 (354)
T ss_pred             CCccccCcCchhhhHHHHhccCc-cc-CccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCC
Confidence                  12245588999997421 11 11112234578899999999999999999999999999999999999998765


Q ss_pred             -cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          161 -LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       161 -~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                       ..+|+.|+|+|.++..+++++|++++ +++|+.|.|+|+++.  .+|+.|+|.+++.+.+.++|+||||+++|++|+|+
T Consensus       159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~  235 (354)
T TIGR02349       159 DPKTCPTCGGTGQVRRQQGTPFGFFQQ-QQTCPTCGGEGKIIK--EPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVS  235 (354)
T ss_pred             CCccCCCCCCeeEEEEEEeccCCceEE-EEecCCCCCcceecC--CCCCCCCCCcEecccceEEEEECCCCCCCCEEEEe
Confidence             56799999999999999999999987 679999999999986  89999999999999999999999999999999999


Q ss_pred             cCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++. .+..+|||+|+|++++|+.|+|+|+||++++.|||.|||+|+++.|+|||| .+.|.||++  ++++...   
T Consensus       236 g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g--~~~g~~~~i~  312 (354)
T TIGR02349       236 GKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAG--TQSGTVFRLK  312 (354)
T ss_pred             cCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCc--ccCCcEEEEC
Confidence            999985 456789999999999999999999999999999999999999999999999 588999876  4555433   


Q ss_pred             ---CC----CCCccEEEEEEEEEe
Q 019908          316 ---DN----FTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ---~~----~~~GdL~v~~~V~~p  332 (334)
                         ++    ..+|||||+|+|.||
T Consensus       313 g~G~p~~~~~~~GDL~i~~~v~~P  336 (354)
T TIGR02349       313 GKGVPRLRGNGRGDLLVTVKVETP  336 (354)
T ss_pred             CCCcCCCCCCCCCCEEEEEEEECC
Confidence               22    358999999999999

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-70  Score=527.31  Aligned_cols=308  Identities=38%  Similarity=0.716  Sum_probs=261.7

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCC
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGA   85 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~   85 (334)
                      ..+|||+||||+++|+.+|||+|||+||++||||+|++ +   ++|++|++||++|+|+.+|+.||+||++++..+.+++
T Consensus         2 ~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (371)
T PRK10767          2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG   81 (371)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCC
Confidence            35799999999999999999999999999999999974 2   7999999999999999999999999988775321111


Q ss_pred             --CC---CCC-cchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccC
Q 019908           86 --GA---AHN-PFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSG  159 (334)
Q Consensus        86 --~~---~~~-~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~  159 (334)
                        ++   +.+ |.++|+.|||+++    + +..+.+.++.|+.+.|++||+|+|+|+++++.+.+.+.|+.|+|+|....
T Consensus        82 ~~~~~~~~~~~f~~~f~~~fgg~~----~-~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~  156 (371)
T PRK10767         82 GFGGGGGFGDIFGDIFGDIFGGGR----G-GGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPG  156 (371)
T ss_pred             CCCCccccccchhhhhhhhccCCc----c-ccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCC
Confidence              11   112 3356666665311    1 11122457889999999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEE
Q 019908          160 A-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAF  238 (334)
Q Consensus       160 ~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l  238 (334)
                      . ..+|+.|+|+|.++...    |+++ ++.+|+.|.|+|+++.  ++|+.|+|.+++.+.+.++|.||||+++|++|+|
T Consensus       157 ~~~~~C~~C~G~G~~~~~~----g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~  229 (371)
T PRK10767        157 TSPKTCPTCHGAGQVRMQQ----GFFT-VQQTCPTCHGRGKIIK--DPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRL  229 (371)
T ss_pred             CCCccCCCCCCeeEEEEee----ceEE-EEEeCCCCCCceeECC--CCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEE
Confidence            5 45799999999876543    5664 6789999999999986  8999999999999999999999999999999999


Q ss_pred             ecCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc--
Q 019908          239 EGQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF--  315 (334)
Q Consensus       239 ~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~--  315 (334)
                      +|+|++. +++.+|||+|+|++++|+.|+|+|+||++++.|||.+||+|+++.|+||||. +.|+||++  ++++...  
T Consensus       230 ~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~-i~v~ip~g--~~~g~~~~i  306 (371)
T PRK10767        230 SGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGR-VKLKIPEG--TQTGKLFRL  306 (371)
T ss_pred             ecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCc-EEEEeCCC--CCCCCEEEE
Confidence            9999985 4567899999999999999999999999999999999999999999999994 89999976  4555433  


Q ss_pred             ----C----CCCCccEEEEEEEEEe
Q 019908          316 ----D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ----~----~~~~GdL~v~~~V~~p  332 (334)
                          +    +..+|||||+|+|.||
T Consensus       307 ~g~G~p~~~~~~~GDL~v~~~v~~P  331 (371)
T PRK10767        307 RGKGVKSVRSGARGDLYCQVVVETP  331 (371)
T ss_pred             CCCCcCCCCCCCCCCEEEEEEEECC
Confidence                2    2357999999999999

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.6e-70  Score=527.07  Aligned_cols=313  Identities=36%  Similarity=0.649  Sum_probs=262.8

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC---C
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG---G   84 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~---~   84 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||.+|++||+||++++..+.+   +
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~   81 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG   81 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCcccc
Confidence            47999999999999999999999999999999999753   89999999999999999999999999887653211   1


Q ss_pred             CC-----CCCCcchhhccccCC---C-CCCCC-C--CC--CCCcccccccEEEeeeeceeeeecCcccccccceeeeCCC
Q 019908           85 AG-----AAHNPFDIFESFFGG---G-TFGAG-G--SS--RGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPK  150 (334)
Q Consensus        85 ~~-----~~~~~~d~f~~~Fg~---~-~~~~~-~--~~--~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~  150 (334)
                      .+     .+.++.|+|.+||+.   + .|++. .  .+  ....+.++.|+.+.|.+||+|+|+|+.+++.+++.+.|+.
T Consensus        82 ~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~  161 (382)
T PRK14291         82 QEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEA  161 (382)
T ss_pred             ccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCC
Confidence            01     123455777777421   1 12110 0  11  0122346889999999999999999999999999999999


Q ss_pred             CCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccC
Q 019908          151 CKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKG  229 (334)
Q Consensus       151 C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G  229 (334)
                      |+|+|..... ..+|+.|+|+|.++..     +++++++.+|+.|.|+|. +.  ++|+.|+|.+++.+.++++|+||||
T Consensus       162 C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~g~~~~~~~C~~C~G~G~-~~--~~C~~C~G~g~v~~~~~l~V~Ip~G  233 (382)
T PRK14291        162 CGGTGYDPGSGEKVCPTCGGSGEIYQR-----GGFFRISQTCPTCGGEGV-LR--EPCSKCNGRGLVIKKETIKVRIPPG  233 (382)
T ss_pred             CccccCCCCCCCccCCCCCCceEEEEe-----cceEEEEecCCCCCCceE-Ec--cCCCCCCCCceEEeeeEEEEEeCCC
Confidence            9999998765 4679999999987664     133456899999999995 43  8999999999999999999999999


Q ss_pred             ccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCce
Q 019908          230 MQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEI  308 (334)
Q Consensus       230 ~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~  308 (334)
                      +.+|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||++++.|+|.||++|+++.|+|+||+.+.|+||++  
T Consensus       234 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g--  311 (382)
T PRK14291        234 VDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPG--  311 (382)
T ss_pred             CCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCc--
Confidence            99999999999999864 678999999999999999999999999999999999999999999999999899999987  


Q ss_pred             ecCCccc------C----CCCCccEEEEEEEEEee
Q 019908          309 IKPGIYF------D----NFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       309 i~~g~~~------~----~~~~GdL~v~~~V~~p~  333 (334)
                      +++|...      +    ...+|||||+|+|.||-
T Consensus       312 ~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        312 TKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK  346 (382)
T ss_pred             cCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            4555433      2    23579999999999993

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.8e-70  Score=523.30  Aligned_cols=313  Identities=34%  Similarity=0.609  Sum_probs=265.6

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCC-
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGA-   85 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~-   85 (334)
                      .|||++|||+++|+.+|||+|||+||++||||+|++.     ++|++|++||++|+|+.+|+.||+||+.+++.+.++. 
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~~   82 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFN   82 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCcc
Confidence            6999999999999999999999999999999999742     8999999999999999999999999988765311110 


Q ss_pred             -C---CCCCcchhhccccCCCCCC----CCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCc
Q 019908           86 -G---AAHNPFDIFESFFGGGTFG----AGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK  157 (334)
Q Consensus        86 -~---~~~~~~d~f~~~Fg~~~~~----~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~  157 (334)
                       +   ++.++.|+|+.|||+. ++    ++.++..+...++.|+.+.|.+||+|+|.|+++++.+.+.+.|+.|+|+|..
T Consensus        83 ~~~~~~~~~~~d~f~~~fg~~-~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~  161 (365)
T PRK14290         83 WDNFTHFSDINDIFNQIFGGN-FGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAK  161 (365)
T ss_pred             ccccccccchhHHHHHHhcCc-cccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCC
Confidence             0   1235678899999742 11    0101111112347899999999999999999999999999999999999998


Q ss_pred             cCCcccCCCCCCCcEEEEEEeecccee-eEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEE
Q 019908          158 SGALGKCYGCQGTGMKITTRQIGLGMI-QQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKI  236 (334)
Q Consensus       158 ~~~~~~C~~C~G~G~~~~~~~~~~g~~-~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i  236 (334)
                      .....+|+.|+|+|.+...++  +|++ ++.+.+|+.|.|+|+++.  ++|+.|+|.+++.+.++++|.||||+.+|++|
T Consensus       162 ~~~~~~C~~C~G~G~~~~~~~--~g~~~~~~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i  237 (365)
T PRK14290        162 NGKLITCPTCHGTGQQRIVRG--QGFFRMVTVTTCRTCGGRGRIPE--EKCPRCNGTGTVVVNEDISVKIPKGATDNLRL  237 (365)
T ss_pred             CCCCccCCCCCCcCEEEEEec--cCeEEEEEEEeCCCCCCceeEcc--CCCCCCCCceeEEEeeEEEEEECCCCCCCcEE
Confidence            776678999999998877664  4444 456789999999999976  89999999999999999999999999999999


Q ss_pred             EEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc-
Q 019908          237 AFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF-  315 (334)
Q Consensus       237 ~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~-  315 (334)
                      +|+|+|+. +++.+|||||+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|++|. +.|+||++  ++++... 
T Consensus       238 ~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g--~~~g~~ir  313 (365)
T PRK14290        238 RVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEG--TQPGEVLK  313 (365)
T ss_pred             EEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCc--cCCCcEEE
Confidence            99999986 6788999999999999999999999999999999999999999999999996 89999976  4555432 


Q ss_pred             -----C----CCCCccEEEEEEEEEee
Q 019908          316 -----D----NFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       316 -----~----~~~~GdL~v~~~V~~p~  333 (334)
                           +    ...+|||||+|+|.+|.
T Consensus       314 i~g~G~p~~~~~~~GDL~V~~~V~~P~  340 (365)
T PRK14290        314 IKGAGMPHLNGHGSGDLLVRINVEVPK  340 (365)
T ss_pred             ECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence                 1    22579999999999994

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.3e-70  Score=523.20  Aligned_cols=312  Identities=29%  Similarity=0.565  Sum_probs=263.0

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCC--CCC-
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGM--GGA-   85 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~--~~~-   85 (334)
                      +|||+||||+++||.+|||+|||+||++||||+++++   ++|++|++||++|+|+.+|+.||+||++++..+.  +++ 
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~g   82 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGGG   82 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCCCC
Confidence            6999999999999999999999999999999999753   7999999999999999999999999988775321  111 


Q ss_pred             --CCC-CCcchhhccccCCCCCCCCCC-CCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC-
Q 019908           86 --GAA-HNPFDIFESFFGGGTFGAGGS-SRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-  160 (334)
Q Consensus        86 --~~~-~~~~d~f~~~Fg~~~~~~~~~-~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~-  160 (334)
                        +++ .++.++|++||++. |++++. .....+.++.|+.+.|.+||+|+|.|+.+++.+.+.+.|+.|+|+|..... 
T Consensus        83 ~~~~~~~~~~~~f~~~f~~~-~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~  161 (372)
T PRK14300         83 NHGGFHPDINDIFGDFFSDF-MGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGET  161 (372)
T ss_pred             CCCccccchhhhHHHHHHhh-cCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCC
Confidence              111 13345566666421 111111 111122468899999999999999999999999999999999999998765 


Q ss_pred             cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEec
Q 019908          161 LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEG  240 (334)
Q Consensus       161 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g  240 (334)
                      ..+|+.|+|+|.++..    .|+++ ++.+|+.|.|+|+++.  ++|+.|+|.+++.+.+.++|.||||+++|++|+|+|
T Consensus       162 ~~~C~~C~G~G~~~~~----~g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g  234 (372)
T PRK14300        162 VTTCDACSGVGATRMQ----QGFFT-IEQACHKCQGNGQIIK--NPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTG  234 (372)
T ss_pred             CccCCCccCeEEEEEe----eceEE-EEEeCCCCCccceEeC--CCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEec
Confidence            4679999999987652    36666 6789999999999986  899999999999999999999999999999999999


Q ss_pred             CcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc----
Q 019908          241 QADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF----  315 (334)
Q Consensus       241 ~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~----  315 (334)
                      +|++. +++.+|||+|+|++++|+.|+|+|+||++++.|+|.+||+|+++.|+||||+.+.|+||++  ++++...    
T Consensus       235 ~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g--~~~g~~iri~g  312 (372)
T PRK14300        235 EGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAG--TQNGDQLRLRS  312 (372)
T ss_pred             cccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCc--cCCCcEEEECC
Confidence            99986 4677899999999999999999999999999999999999999999999998899999987  4555433    


Q ss_pred             --CC----CCCccEEEEEEEEEee
Q 019908          316 --DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       316 --~~----~~~GdL~v~~~V~~p~  333 (334)
                        ++    ..+|||||+|+|.||.
T Consensus       313 ~G~p~~~~~~~GDL~V~~~v~~P~  336 (372)
T PRK14300        313 KGMSKMRSTIRGDMLTHIHVEVPK  336 (372)
T ss_pred             CCCCCCCCCCCCCEEEEEEEECCC
Confidence              22    3579999999999994

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2e-69  Score=520.57  Aligned_cols=310  Identities=32%  Similarity=0.614  Sum_probs=264.2

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC--
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG--   83 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~--   83 (334)
                      ++++|||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+|+.+|++||+||++++.....  
T Consensus         2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~~   81 (378)
T PRK14283          2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQED   81 (378)
T ss_pred             CCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccccc
Confidence            4578999999999999999999999999999999999753   89999999999999999999999999887642100  


Q ss_pred             --CCCCCC--------Ccchhhccc-cCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCC
Q 019908           84 --GAGAAH--------NPFDIFESF-FGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCK  152 (334)
Q Consensus        84 --~~~~~~--------~~~d~f~~~-Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~  152 (334)
                        +.....        ++.++|+.| |++      ++  .+++.++.|+.++|.+||+|+|.|+.+++.+++.+.|+.|+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~f~~~~fgg------~~--~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~  153 (378)
T PRK14283         82 IFNNINFEDIFQGFGFGIGNIFDMFGFGG------GS--RHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCN  153 (378)
T ss_pred             cccccCccccccccccchhhhccccccCC------CC--CCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCC
Confidence              000000        112333333 321      11  12234688999999999999999999999999999999999


Q ss_pred             CCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCcc
Q 019908          153 GKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQ  231 (334)
Q Consensus       153 G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~  231 (334)
                      |+|..... ..+|+.|+|+|.+...+++++|++++ +.+|+.|.|+|+.+.  ++|..|+|++++.+.+.++|.||||++
T Consensus       154 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~l~V~IppG~~  230 (378)
T PRK14283        154 GSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMN-VTTCPDCQGEGKIVE--KPCSNCHGKGVVRETKTISVKIPAGVE  230 (378)
T ss_pred             ccccCCCCCCccCCCcCCccEEEEEEeccCceEEE-EEECCCCCccceecC--CCCCCCCCceeeccceeEEEEECCCCC
Confidence            99987655 46799999999999999999998875 579999999999976  899999999999999999999999999


Q ss_pred             CCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceec
Q 019908          232 HGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIK  310 (334)
Q Consensus       232 ~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~  310 (334)
                      +|++|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||++++.|||.+|++|+++.|+|||| .+.|+||++  ++
T Consensus       231 ~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g--~~  307 (378)
T PRK14283        231 TGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAG--TQ  307 (378)
T ss_pred             CCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCC--CC
Confidence            999999999999864 56789999999999999999999999999999999999999999999999 589999976  34


Q ss_pred             CCccc------C----CCCCccEEEEEEEEEe
Q 019908          311 PGIYF------D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       311 ~g~~~------~----~~~~GdL~v~~~V~~p  332 (334)
                      ++...      +    ...+|||||+|+|.||
T Consensus       308 ~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P  339 (378)
T PRK14283        308 SGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVP  339 (378)
T ss_pred             CCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence            55432      2    2357999999999999

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.1e-69  Score=518.35  Aligned_cols=318  Identities=33%  Similarity=0.671  Sum_probs=267.6

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG   84 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~   84 (334)
                      ++.+|||++|||+++|+.+|||+|||+||++||||+|++.    ++|++|++||++|+||.+|++||+||+++++.+.+.
T Consensus         2 ~~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~   81 (386)
T PRK14289          2 AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGG   81 (386)
T ss_pred             CccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCC
Confidence            3468999999999999999999999999999999999743    799999999999999999999999998876532111


Q ss_pred             C---CCCCCcchhh---ccccCCC--CCC---C-CCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCC
Q 019908           85 A---GAAHNPFDIF---ESFFGGG--TFG---A-GGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCK  152 (334)
Q Consensus        85 ~---~~~~~~~d~f---~~~Fg~~--~~~---~-~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~  152 (334)
                      +   +++.++.++|   +++|++.  +++   . ++........++.|+.+.+.+||+|+|+|+++++.+++.+.|+.|+
T Consensus        82 ~~~~~~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~  161 (386)
T PRK14289         82 GGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCH  161 (386)
T ss_pred             CCCCCCCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCC
Confidence            1   1112333443   3335421  110   0 0001112234688999999999999999999999999999999999


Q ss_pred             CCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCcc
Q 019908          153 GKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQ  231 (334)
Q Consensus       153 G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~  231 (334)
                      |+|..... ..+|+.|+|+|.++..+++++|+++. +.+|+.|.|+|+++.  .+|+.|.|++++.+.++++|+||+|++
T Consensus       162 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~  238 (386)
T PRK14289        162 GTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQT-QSTCPTCNGEGKIIK--KKCKKCGGEGIVYGEEVITVKIPAGVA  238 (386)
T ss_pred             CCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEE-EEecCCCCccccccC--cCCCCCCCCcEEeeeEEEEEEeCCCCC
Confidence            99987654 46799999999999999999999975 899999999999986  899999999999999999999999999


Q ss_pred             CCcEEEEecCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceec
Q 019908          232 HGQKIAFEGQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIK  310 (334)
Q Consensus       232 ~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~  310 (334)
                      +|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+++||++++.|+|.+|++|+++.|+|+||+ +.|+||++  ++
T Consensus       239 ~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g--~~  315 (386)
T PRK14289        239 EGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAG--TQ  315 (386)
T ss_pred             CCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCc--cC
Confidence            99999999999986 4667899999999999999999999999999999999999999999999997 89999987  34


Q ss_pred             CCccc------C----CCCCccEEEEEEEEEe
Q 019908          311 PGIYF------D----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       311 ~g~~~------~----~~~~GdL~v~~~V~~p  332 (334)
                      ++...      .    ...+|||||+|+|+||
T Consensus       316 ~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P  347 (386)
T PRK14289        316 PGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIP  347 (386)
T ss_pred             CCcEEEECCCCcCCCCCCCCCcEEEEEEEEeC
Confidence            54432      1    2357999999999999

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.4e-69  Score=516.92  Aligned_cols=316  Identities=33%  Similarity=0.605  Sum_probs=270.2

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC--CC
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG--GA   85 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~--~~   85 (334)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||.+|+.||+||++++..+.+  +.
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~~   81 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPDM   81 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCCc
Confidence            36999999999999999999999999999999999754   89999999999999999999999999887653211  11


Q ss_pred             CCCCCcchhhccccCCCC-CCCCC-CCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC-cc
Q 019908           86 GAAHNPFDIFESFFGGGT-FGAGG-SSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LG  162 (334)
Q Consensus        86 ~~~~~~~d~f~~~Fg~~~-~~~~~-~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~-~~  162 (334)
                      ++..++.|+|++||++.+ +++.+ +.+.+++.++.|+.+.|.+||+|+|.|+++++.+++.+.|+.|+|+|..... ..
T Consensus        82 ~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~  161 (374)
T PRK14293         82 GDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPT  161 (374)
T ss_pred             ccccchHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCe
Confidence            112234588999986311 11000 0111233568899999999999999999999999999999999999998765 46


Q ss_pred             cCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCc
Q 019908          163 KCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQA  242 (334)
Q Consensus       163 ~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G  242 (334)
                      +|+.|+|+|.+...+++++|++++ +.+|+.|.|+|+++.  .+|+.|.|.+++.+.++++|+||||+++|++|+|+|+|
T Consensus       162 ~C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G  238 (374)
T PRK14293        162 TCSTCGGAGQVRRATRTPFGSFTQ-VSECPTCNGTGQVIE--DPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEG  238 (374)
T ss_pred             eCCCCCCcceEEEEEecCcceEEE-EeeCCCCCcceeEec--cCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCc
Confidence            799999999999999999998886 589999999999986  89999999999999999999999999999999999999


Q ss_pred             CCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------
Q 019908          243 DEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------  315 (334)
Q Consensus       243 ~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------  315 (334)
                      ++.. +..+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+||||+ +.|+||++  ++++..+      
T Consensus       239 ~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~--~~~g~~~ri~g~G  315 (374)
T PRK14293        239 DAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAG--TQPNTVLTLENKG  315 (374)
T ss_pred             cCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCC--CCCCCEEEECCCC
Confidence            9864 566899999999999999999999999999999999999999999999997 78898876  4555433      


Q ss_pred             CC-----CCCccEEEEEEEEEe
Q 019908          316 DN-----FTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 ~~-----~~~GdL~v~~~V~~p  332 (334)
                      +|     +.+|||||+|+|.||
T Consensus       316 ~p~~~~~~~~GDL~v~~~v~~P  337 (374)
T PRK14293        316 VPRLGNPVARGDHLITVKVKIP  337 (374)
T ss_pred             CCCCCCCCCcCCEEEEEEEECC
Confidence            22     247999999999999

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-68  Score=514.33  Aligned_cols=312  Identities=32%  Similarity=0.645  Sum_probs=268.4

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC---C
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG---A   85 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~---~   85 (334)
                      .|||++|||+++|+.+|||+|||+||++||||+++++   ++|++|++||++|+||.+|+.||+||+++.....++   +
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~~   81 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFG   81 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCcccC
Confidence            5899999999999999999999999999999999864   899999999999999999999999998763211011   1


Q ss_pred             CCCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC--ccc
Q 019908           86 GAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA--LGK  163 (334)
Q Consensus        86 ~~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~--~~~  163 (334)
                      +.++++.|+|+.|||++++++  ....+++.++.|+.+.+.+||+|+++|+++++.+++.+.|+.|+|+|.....  ..+
T Consensus        82 ~~~~d~~d~f~~~fg~~~~~~--~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~  159 (371)
T PRK14292         82 GMGFDPMDIFEQLFGGAGFGG--GRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKT  159 (371)
T ss_pred             ccCCChHHHHHHhhCCCCcCC--CCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCcc
Confidence            112356689999997532211  1111234568899999999999999999999999999999999999987654  467


Q ss_pred             CCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcC
Q 019908          164 CYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQAD  243 (334)
Q Consensus       164 C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~  243 (334)
                      |+.|+|+|.+...+++.+|++++ +.+|+.|.|+|+.+.  .+|+.|.|.+++.+.++++|.||+|+++|++|+|+|+|+
T Consensus       160 C~~C~G~G~~~~~~~~~~g~~~~-~~~C~~C~G~G~~~~--~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~  236 (371)
T PRK14292        160 CPTCRGAGAVRAQARTIFGVVET-QQPCPTCRGEGQIIT--DPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGN  236 (371)
T ss_pred             CCCCCCccEEEEEEeccCceEEE-eeecCCCcccceecC--CCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcC
Confidence            99999999999888888888875 789999999999986  999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------C-
Q 019908          244 EAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------D-  316 (334)
Q Consensus       244 ~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~-  316 (334)
                      +.+++. |||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+. .|.||++  ++++...      + 
T Consensus       237 ~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~-~v~ip~g--~~~g~~~~i~g~G~p  312 (371)
T PRK14292        237 EGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQ-VIEVKPG--TQHGDLHRLRGQGMP  312 (371)
T ss_pred             CCCCCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCE-EEecCCC--cCCCcEEEECCCCCC
Confidence            977665 999999999999999999999999999999999999999999999984 7899887  3555432      1 


Q ss_pred             ---CCCCccEEEEEEEEEe
Q 019908          317 ---NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       317 ---~~~~GdL~v~~~V~~p  332 (334)
                         ...+|||||+|+|.||
T Consensus       313 ~~~~~~~GDL~V~~~v~~P  331 (371)
T PRK14292        313 RLQGAGTGDLIVEYEIAVP  331 (371)
T ss_pred             CCCCCCCCCEEEEEEEECC
Confidence               2347999999999999

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.7e-53  Score=395.18  Aligned_cols=240  Identities=37%  Similarity=0.617  Sum_probs=196.4

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC---
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG---   84 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~---   84 (334)
                      ..|||+||||+++||.+|||+|||+||++||||+|+++   ++|++|++||++|+|+.+|+.||+||++++..++.+   
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~   82 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP   82 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence            47999999999999999999999999999999999754   899999999999999999999999998754322110   


Q ss_pred             ---C-CC-----CCCcchhhccccCCC-CCCCCC---CCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCC
Q 019908           85 ---A-GA-----AHNPFDIFESFFGGG-TFGAGG---SSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKC  151 (334)
Q Consensus        85 ---~-~~-----~~~~~d~f~~~Fg~~-~~~~~~---~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C  151 (334)
                         + ++     ..++.++|++|||+. ++++.+   ......++++.|+.+.+.+||+|++.|+++.+.+.        
T Consensus        83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~--------  154 (291)
T PRK14299         83 GPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA--------  154 (291)
T ss_pred             CCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC--------
Confidence               0 11     124568899999742 111100   00012245688999999999999999998875431        


Q ss_pred             CCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCcc
Q 019908          152 KGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQ  231 (334)
Q Consensus       152 ~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~  231 (334)
                                                                                         .++++|+||||++
T Consensus       155 -------------------------------------------------------------------g~~~~V~Ip~G~~  167 (291)
T PRK14299        155 -------------------------------------------------------------------GERLSVRIPPGVR  167 (291)
T ss_pred             -------------------------------------------------------------------CEEEEEecCCCcC
Confidence                                                                               1358999999999


Q ss_pred             CCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecC
Q 019908          232 HGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKP  311 (334)
Q Consensus       232 ~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~  311 (334)
                      +|++|+|+|+|++.     |||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+||||+ +.|+||++  +++
T Consensus       168 ~G~~ir~~g~G~~~-----GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~--~~~  239 (291)
T PRK14299        168 EGQVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPR--TQA  239 (291)
T ss_pred             CCcEEEECCCCCCC-----CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCC--cCC
Confidence            99999999999863     99999999999999999999999999999999999999999999997 88999876  456


Q ss_pred             Cccc------C---CCCCccEEEEEEEEEee
Q 019908          312 GIYF------D---NFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       312 g~~~------~---~~~~GdL~v~~~V~~p~  333 (334)
                      |...      +   ++.+|||||+|+|.||-
T Consensus       240 g~~~rl~g~G~p~~~~~~GDL~v~~~V~~P~  270 (291)
T PRK14299        240 GRKLRLKGKGWPRGPAGRGDQYAEVRITIPT  270 (291)
T ss_pred             CCEEEECCCCCCCCCCCCCCEEEEEEEECCC
Confidence            5533      2   24689999999999993

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=2.2e-51  Score=385.16  Aligned_cols=254  Identities=29%  Similarity=0.449  Sum_probs=202.5

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChh----hhhcCC-
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGED----ALKEGM-   82 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~----~~~~~~-   82 (334)
                      .+|||++|||+++|+.+|||+|||+||++||||+++++   ++|++|++||++|+|+.+|+.||+||..    ++.... 
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~   82 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ   82 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccccccc
Confidence            47999999999999999999999999999999998753   8999999999999999999999999854    222110 


Q ss_pred             -CCC--CCCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccC
Q 019908           83 -GGA--GAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSG  159 (334)
Q Consensus        83 -~~~--~~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~  159 (334)
                       +++  ....++.++|+.|||+++   +.+ .....+++.|+.+++.+||+|++.|+.+++.+.+.+    |        
T Consensus        83 ~~~~~~~~~~~~~~~f~~~~g~~~---~~~-~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~----~--------  146 (306)
T PRK10266         83 HGDGQSFNAEDFDDIFSSIFGQHA---RQS-RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV----Y--------  146 (306)
T ss_pred             cCCCCCCCCCCHHHHHHHHhCCCC---CCC-CCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc----c--------
Confidence             111  112356688999887421   111 112334688999999999999999999988776532    1        


Q ss_pred             CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          160 ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       160 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                              .|.|...                                         ....++++|+||+|+++|++|+|+
T Consensus       147 --------~g~G~~~-----------------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~  177 (306)
T PRK10266        147 --------NAFGMIE-----------------------------------------QEIPKTLNVKIPAGVGNGQRIRLK  177 (306)
T ss_pred             --------cCCCeEE-----------------------------------------EeeeEEEEEEECCCCcCCcEEEEe
Confidence                    1222110                                         012357999999999999999999


Q ss_pred             cCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---
Q 019908          240 GQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---  315 (334)
Q Consensus       240 g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---  315 (334)
                      |+|++.. +..+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+||+ +.|+||++  +++|...   
T Consensus       178 g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g--~~~g~~~ri~  254 (306)
T PRK10266        178 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPG--SQAGQRLRVK  254 (306)
T ss_pred             cCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCC--cCCCCEEEEC
Confidence            9999864 457899999999999999999999999999999999999999999999998 88999987  3454432   


Q ss_pred             -----CCCCCccEEEEEEEEEe
Q 019908          316 -----DNFTSVNLYLHEYCFLW  332 (334)
Q Consensus       316 -----~~~~~GdL~v~~~V~~p  332 (334)
                           .++.+|||||+|+|.+|
T Consensus       255 g~G~p~~~~~GdL~v~~~v~~P  276 (306)
T PRK10266        255 GKGLVSKKQTGDLYAVLKIVMP  276 (306)
T ss_pred             CCCCCCCCCCCCEEEEEEEECC
Confidence                 22458999999999999

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.4e-42  Score=313.23  Aligned_cols=295  Identities=38%  Similarity=0.602  Sum_probs=222.1

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCC-
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGM-   82 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~-   82 (334)
                      ....+|||++|||+++|+..|||+|||+||++||||+||+.    ++|++|+.||||||||++|+.||+||++++.... 
T Consensus        12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~   91 (336)
T KOG0713|consen   12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK   91 (336)
T ss_pred             hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence            34679999999999999999999999999999999999964    8999999999999999999999999999987421 


Q ss_pred             -CCCCCCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCc
Q 019908           83 -GGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGAL  161 (334)
Q Consensus        83 -~~~~~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~  161 (334)
                       +.++.++  .++|+.||+.-++..++.-......++.++...++.+++++|.|...+....+.+.|. |.|+-.     
T Consensus        92 ~~~~g~~~--~~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g~~~-----  163 (336)
T KOG0713|consen   92 DGEGGGGG--NDIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APGTRK-----  163 (336)
T ss_pred             ccccCCcc--cchHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCcccc-----
Confidence             1111111  4566666653221111111122356788999999999999999987776655555542 122111     


Q ss_pred             ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecC
Q 019908          162 GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQ  241 (334)
Q Consensus       162 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~  241 (334)
                      -.|.      ..+..++.++|+++.++               ...|..|.+.++..+....++.+..|...+....+..+
T Consensus       164 ~~~~------~~~~~~~~~~g~~~~~q---------------~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~  222 (336)
T KOG0713|consen  164 CNCR------LEMFTQQEGPGRFQMLQ---------------EAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELE  222 (336)
T ss_pred             cCCh------hhheeeccCCChhhhhh---------------hhhhccCCccceeecCCceeeeeeecccCCceeeeecc
Confidence            0111      12333445555554433               25566666777788899999999999999999999999


Q ss_pred             cCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------
Q 019908          242 ADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------  315 (334)
Q Consensus       242 G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------  315 (334)
                      |.+..-+.+||+.+.+...+|+.|.|++++|++.+.+++.+++.|+..++.++|+..+.+.....  ..|+...      
T Consensus       223 ~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~--~~p~~~~~~~~~~  300 (336)
T KOG0713|consen  223 GEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKI--TWPGARTRKKGEG  300 (336)
T ss_pred             CCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhc--cccchhhhhhhcc
Confidence            99888888999999999999999999999999999999999999999999999998655543211  1222111      


Q ss_pred             -----CCCCCccEEEEEEEEEee
Q 019908          316 -----DNFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       316 -----~~~~~GdL~v~~~V~~p~  333 (334)
                           .....|++|++|.+.+|.
T Consensus       301 ~~~l~~~~~~~~~~~t~~~~~~~  323 (336)
T KOG0713|consen  301 MPLLKNRNEKGNLYVTFDVEFPK  323 (336)
T ss_pred             chhhhccchhcceeEEecccCcc
Confidence                 345689999999999983

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.4e-40  Score=304.90  Aligned_cols=242  Identities=34%  Similarity=0.645  Sum_probs=206.4

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCCCC
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAA   88 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~   88 (334)
                      .|||+||||+++|+..|||.||++||++||||.|.+.   ++|++|.+|||+|+|+++|+.||+++..+..      +..
T Consensus        43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~------~~~  116 (288)
T KOG0715|consen   43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG------EFG  116 (288)
T ss_pred             cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc------ccc
Confidence            3999999999999999999999999999999999865   8999999999999999999999999976511      112


Q ss_pred             CCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCc-ccCCCC
Q 019908           89 HNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGAL-GKCYGC  167 (334)
Q Consensus        89 ~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~-~~C~~C  167 (334)
                      .+++++|..+|++.         ......+.+..+.+.++|+++..|..+.+.+.....|.+|.|.|...+.. ..|..|
T Consensus       117 g~~~~~~~~~~~~~---------~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~  187 (288)
T KOG0715|consen  117 GNPFDVFLEFFGGK---------MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTC  187 (288)
T ss_pred             CCccchHHHhhccc---------ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchhh
Confidence            36788899888741         01112344667779999999999999999999999999999999777664 679999


Q ss_pred             CCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCC
Q 019908          168 QGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPD  247 (334)
Q Consensus       168 ~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~  247 (334)
                      .|.|.+.......+.+     .+|+.|.|.|.+..  +.|..|.|.+.+...+.+.|.+|+|+.++.+|++.+.|..   
T Consensus       188 ~~~~~~~~~~~~~f~~-----~~~~~c~~~~~~~~--~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~---  257 (288)
T KOG0715|consen  188 SGRGLVSNPKEDPFIL-----YTCSYCLGRGLVLR--DNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND---  257 (288)
T ss_pred             hCcccccccccCCcce-----eecccccccceecc--chHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc---
Confidence            9999665433322211     18999999999987  5599999999999999999999999999999999998864   


Q ss_pred             CCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHH
Q 019908          248 TITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTE  282 (334)
Q Consensus       248 ~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~  282 (334)
                          ||+|++.|.+++.|+|+|.|++++..|++.+
T Consensus       258 ----~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  258 ----DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             ----eEEEEEEeccCcccccccCcccccccccccC
Confidence                9999999999999999999999999998753

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=1.4e-36  Score=301.57  Aligned_cols=111  Identities=20%  Similarity=0.189  Sum_probs=98.4

Q ss_pred             eEEeEEEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCC
Q 019908          216 TQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLD  295 (334)
Q Consensus       216 ~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tld  295 (334)
                      +.+.+.++|+||+|+++|++|+|+|+|+..+++. |||+|+|++++|+.|+|+|+|||+++.|+|.+||+|+++.|+|||
T Consensus       693 vkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLD  771 (871)
T TIGR03835       693 TNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPN  771 (871)
T ss_pred             eeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCC
Confidence            4556789999999999999999999999876664 999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEEcCCCceecCCccc------CC---CCCccEEEEEEEE
Q 019908          296 GRQLLIKSNPGEIIKPGIYF------DN---FTSVNLYLHEYCF  330 (334)
Q Consensus       296 G~~l~v~i~~g~~i~~g~~~------~~---~~~GdL~v~~~V~  330 (334)
                      |+ +.|+||++  +++|.++      +|   +.+|||||+|+|.
T Consensus       772 Gr-VkLkIPpg--TqpGqvLRIkGKGMP~~~~~RGDLyV~f~V~  812 (871)
T TIGR03835       772 KL-FNVRIPGG--IKVNDQVIFKDLGLTKTKYDKGSLIVHLYYS  812 (871)
T ss_pred             CC-EEEeeCCC--CCCCcEEEECCCCCCCCCCCCCCEEEEEEEe
Confidence            97 88999876  4666543      22   3589999999985

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=1.4e-20  Score=174.91  Aligned_cols=231  Identities=42%  Similarity=0.702  Sum_probs=159.7

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCC-C
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG-G   84 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~-~   84 (334)
                      ..|||++|+|.++|+.+||++|||++|++||||+|+.+     ++|+++++||++|+|+.+|..||+||++++.+... .
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~   81 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS   81 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence            46899999999999999999999999999999998754     56999999999999999999999999866653111 1


Q ss_pred             CC--------CCCCcchhhccccCCC-CCCCC-C------------------------CC-C---------CCccccccc
Q 019908           85 AG--------AAHNPFDIFESFFGGG-TFGAG-G------------------------SS-R---------GRRRKQGED  120 (334)
Q Consensus        85 ~~--------~~~~~~d~f~~~Fg~~-~~~~~-~------------------------~~-~---------~~~~~~~~d  120 (334)
                      ..        ...+..++|.+|||.. .+... .                        .. .         .........
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
T KOG0714|consen   82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP  161 (306)
T ss_pred             CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence            10        1112345666677621 11100 0                        00 0         000000111


Q ss_pred             EEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       121 i~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.+.+.+++++++.+..+...+.+...                                         .....       
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~-------  193 (306)
T KOG0714|consen  162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------TSNGR-------  193 (306)
T ss_pred             ccCCcceeHHHhccccceeeecccccc-----------------------------------------cCCcc-------
Confidence            222222234444444433333222110                                         00000       


Q ss_pred             EccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEE--Eec
Q 019908          201 ISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD--HTL  278 (334)
Q Consensus       201 ~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~--~~I  278 (334)
                               .    .........+.+++++..|+.+....+|...++..+-++++.+..++|..|.+.+.+|...  ..|
T Consensus       194 ---------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~  260 (306)
T KOG0714|consen  194 ---------E----GSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEI  260 (306)
T ss_pred             ---------c----ccCccceeEEeccCCcccccceeccccccccCCcCcceeEEEEecCCcccccCCCccceeccccee
Confidence                     0    1234567899999999999999999999887776788899999999999999999999999  999


Q ss_pred             CHHHHhCCCeEEEecCCCCeEEEE
Q 019908          279 SLTEALCGFQFALTHLDGRQLLIK  302 (334)
Q Consensus       279 ~l~~al~G~~~~i~tldG~~l~v~  302 (334)
                      ++.+|++|....++++++..+.+.
T Consensus       261 s~~~~~~~~~~~~~~~~~~~~~~~  284 (306)
T KOG0714|consen  261 SLKEALLGVTVFVPTLDGRSYSLS  284 (306)
T ss_pred             ehhhhhcCcceeeecccCccccCc
Confidence            999999999999999999865544

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.83  E-value=5.6e-21  Score=179.76  Aligned_cols=237  Identities=19%  Similarity=0.345  Sum_probs=150.3

Q ss_pred             CCCCCCCCccccccccCC--CCCCCH---------HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhc
Q 019908            3 GRTPRRSNNTKYYEILGV--SKSATE---------DELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYD   71 (334)
Q Consensus         3 ~~~~~~~~~~~~y~iLgv--~~~a~~---------~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD   71 (334)
                      +++++..+-+..|+-|-.  .|+.++         +||++||--|+   +|.          -..+|+.+..+...    
T Consensus        13 ~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLs---D~e----------KRa~YD~fG~~~~~----   75 (371)
T COG0484          13 SKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLS---DPE----------KRAAYDQFGHAGFK----   75 (371)
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhC---CHH----------HHHHhhccCccccc----
Confidence            355555566677777654  233222         35777777776   333          34689988866554    


Q ss_pred             ccChhhhhcCCCCCC-CCCCc-chhhccccCCCCCCCCCCCCCCcccccccEEEeeeecee--------------eeecC
Q 019908           72 QYGEDALKEGMGGAG-AAHNP-FDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLE--------------DLYNG  135 (334)
Q Consensus        72 ~~G~~~~~~~~~~~~-~~~~~-~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~--------------e~~~G  135 (334)
                      .-|..+.  ++++.+ ++.|+ .++|..-.++ ....+  +..++.+...++.++|+..+.              +.|.|
T Consensus        76 ~gg~gg~--g~~~fgg~~~DIF~~~FgGg~~~-~~~~~--~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~G  150 (371)
T COG0484          76 AGGFGGF--GFGGFGGDFGDIFEDFFGGGGGG-RRRPN--RPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHG  150 (371)
T ss_pred             cCCcCCC--CcCCCCCCHHHHHHHhhcCCCcc-cCCCC--CcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCC
Confidence            1121121  233221 55554 4677433322 11111  234555556666666543322              67788


Q ss_pred             cccccccceeeeCCCCCCCCCccCC--------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC---
Q 019908          136 TTKKLSLSRNILCPKCKGKGSKSGA--------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER---  204 (334)
Q Consensus       136 ~~~~i~~~~~~~C~~C~G~G~~~~~--------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~---  204 (334)
                      ...+ .-+...+|++|+|+|.....        +++|+.|+|+|+++.             .+|+.|+|.|++...+   
T Consensus       151 sGak-~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~-------------~pC~~C~G~G~v~~~~~i~  216 (371)
T COG0484         151 SGAK-PGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIK-------------DPCGKCKGKGRVKKKKSIS  216 (371)
T ss_pred             CCCC-CCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECC-------------CCCCCCCCCCeEeeeeEEE
Confidence            7666 33467899999999974322        267999999999875             8999999999855311   


Q ss_pred             --CCCCccCCCceeEEeE--------------------------------------------------------EEEEEe
Q 019908          205 --DKCPQCKANKVTQEKK--------------------------------------------------------VLEVHV  226 (334)
Q Consensus       205 --~~C~~C~G~g~~~~~~--------------------------------------------------------~~~v~I  226 (334)
                        -+--...|..+....+                                                        .++|+|
T Consensus       217 V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~i  296 (371)
T COG0484         217 VNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKI  296 (371)
T ss_pred             EECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEec
Confidence              1111222221111111                                                        688999


Q ss_pred             ccCccCCcEEEEecCcCCC-CCCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          227 EKGMQHGQKIAFEGQADEA-PDTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       227 p~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      |||+++|++++|+|+|++. .+...|||||+|+|+.|+.+..+..+|+.+
T Consensus       297 p~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~~lL~~  346 (371)
T COG0484         297 PAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQKELLEE  346 (371)
T ss_pred             CCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            9999999999999999996 555679999999999999988888777665

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=2.1e-20  Score=176.61  Aligned_cols=88  Identities=48%  Similarity=0.779  Sum_probs=75.9

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      ...++.+||.+|+|+++|+.+|||+|||++++.|||||..|+       ++|+.|.+||||||||.+|++||.||+.|++
T Consensus         4 ~e~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    4 AELDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             cccchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            366788999999999999999999999999999999998765       6899999999999999999999999999998


Q ss_pred             -cCCCCCCCCCCcchh
Q 019908           80 -EGMGGAGAAHNPFDI   94 (334)
Q Consensus        80 -~~~~~~~~~~~~~d~   94 (334)
                       +||.-+.....+.+|
T Consensus        84 t~gwEl~~r~~tpeEI   99 (546)
T KOG0718|consen   84 TEGWELGFRGKTPEEI   99 (546)
T ss_pred             ccCceeecCCCCHHHH
Confidence             666433333344444

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.77  E-value=2.2e-19  Score=160.00  Aligned_cols=70  Identities=60%  Similarity=1.046  Sum_probs=65.6

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---HHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      ...++|++||++++|+.++||+|||+||++||||++++ |   ++|++||+||++|+|+.+|..||.||+.++.
T Consensus        29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            35789999999999999999999999999999999987 3   8999999999999999999999999988764

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.77  E-value=2.4e-19  Score=182.99  Aligned_cols=73  Identities=34%  Similarity=0.632  Sum_probs=67.6

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhc
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE   80 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~   80 (334)
                      +...++||++|||+++|+..|||+|||+||++||||+++++   ++|++|++||+|||||.+|+.||+||..++..
T Consensus       569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~  644 (1136)
T PTZ00341        569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG  644 (1136)
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence            45678999999999999999999999999999999999854   79999999999999999999999999887653

>PHA03102 Small T antigen; Reviewed

Probab=99.75  E-value=5.3e-19  Score=147.89  Aligned_cols=86  Identities=31%  Similarity=0.470  Sum_probs=74.6

Q ss_pred             CccccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCCC
Q 019908           10 NNTKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGA   87 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a--~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~   87 (334)
                      +.+.+|++|||+++|  |.+|||+|||++|+++|||+++++++|++|++||++|+|+.+|..||.+|.......      
T Consensus         3 e~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~------   76 (153)
T PHA03102          3 ESKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE------   76 (153)
T ss_pred             hHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhHHHhccccccCCcccccc------
Confidence            456799999999999  999999999999999999999999999999999999999999999999997654321      


Q ss_pred             CCCcchhhccccCC
Q 019908           88 AHNPFDIFESFFGG  101 (334)
Q Consensus        88 ~~~~~d~f~~~Fg~  101 (334)
                      ...+.++|..+||+
T Consensus        77 ~~~~~~~f~~~fg~   90 (153)
T PHA03102         77 EDVPSGYVGATFGD   90 (153)
T ss_pred             cccHHHHhhhhcCC
Confidence            12267778888864

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=7.2e-18  Score=162.53  Aligned_cols=131  Identities=20%  Similarity=0.413  Sum_probs=92.5

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCC
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERD  205 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~  205 (334)
                      .|.|....-. .....|+.|+|+|....      ...+|+.|+|+|+.+.             .+|+.|+|.|.+.....
T Consensus       147 ~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~~  212 (371)
T PRK10767        147 TCHGSGAKPG-TSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK-------------DPCKKCHGQGRVEKEKT  212 (371)
T ss_pred             CCCCcccCCC-CCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC-------------CCCCCCCCCceEeeeee
Confidence            4566555422 23468999999996531      2357999999998764             78999999987542100


Q ss_pred             ----------------------CCC--ccCCCceeEEeE-------------------------------------EEEE
Q 019908          206 ----------------------KCP--QCKANKVTQEKK-------------------------------------VLEV  224 (334)
Q Consensus       206 ----------------------~C~--~C~G~g~~~~~~-------------------------------------~~~v  224 (334)
                                            ...  .=.|.-++.-..                                     .++|
T Consensus       213 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v  292 (371)
T PRK10767        213 LSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKL  292 (371)
T ss_pred             EEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEE
Confidence                                  000  000111111100                                     5789


Q ss_pred             EeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          225 HVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       225 ~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                      +||+|+++|++++|+|+|++.+ ++..|||||+|+|..|+.|++++.+|+.++
T Consensus       293 ~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        293 KIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             EeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999864 346799999999999999999999887763

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=5.4e-19  Score=162.60  Aligned_cols=88  Identities=45%  Similarity=0.750  Sum_probs=75.3

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCC
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGA   85 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~   85 (334)
                      ...|||++|||+++|+.+||++|||+.|++||||+||++    ++|+++.+||+||+|+..|+.||.++..+....    
T Consensus         3 ~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~----   78 (296)
T KOG0691|consen    3 KDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ----   78 (296)
T ss_pred             ccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch----
Confidence            478999999999999999999999999999999999964    899999999999999999999999997654321    


Q ss_pred             CCCCCcchhhccccCCC
Q 019908           86 GAAHNPFDIFESFFGGG  102 (334)
Q Consensus        86 ~~~~~~~d~f~~~Fg~~  102 (334)
                       ...+..++|...|++.
T Consensus        79 -~~~d~~~~~r~~f~~d   94 (296)
T KOG0691|consen   79 -GREDQADGFRKKFGSD   94 (296)
T ss_pred             -hhhhHHHHHHHHhhhh
Confidence             2345567777777643

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.73  E-value=9.6e-18  Score=161.30  Aligned_cols=130  Identities=20%  Similarity=0.430  Sum_probs=90.6

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      +.|.|....-.  ....|+.|+|+|....      ...+|+.|+|+|+++.             .+|+.|+|.|.+...+
T Consensus       144 ~~C~G~G~~~~--~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~  208 (369)
T PRK14288        144 ESCDGTGAKDK--ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIK-------------TPCQACKGKTYILKDE  208 (369)
T ss_pred             CCCCCcccCCC--CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcc-------------ccCccCCCcceEEEEE
Confidence            34567665432  4568999999996532      1257999999998765             7899999998754200


Q ss_pred             C----------------------CCCcc-CCCceeEEeE--------------------------------------EEE
Q 019908          205 D----------------------KCPQC-KANKVTQEKK--------------------------------------VLE  223 (334)
Q Consensus       205 ~----------------------~C~~C-~G~g~~~~~~--------------------------------------~~~  223 (334)
                      .                      .-+.- .|.-++.-..                                      .++
T Consensus       209 ~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~  288 (369)
T PRK14288        209 EIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELE  288 (369)
T ss_pred             EEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEE
Confidence            0                      00000 0111111100                                      589


Q ss_pred             EEeccCccCCcEEEEecCcCCCCCC-CCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          224 VHVEKGMQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       224 v~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      |+||+|+++|++++|+|+|++.++. ..|||||+|+|+.|+.|+.+...|+.+
T Consensus       289 i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l~~  341 (369)
T PRK14288        289 LKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEK  341 (369)
T ss_pred             EEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            9999999999999999999997654 469999999999999888777655444

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=3.9e-18  Score=161.38  Aligned_cols=71  Identities=48%  Similarity=0.797  Sum_probs=64.6

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDAL   78 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~   78 (334)
                      +...+.||++|||.++|++.|||++||+|||+||||+||+.     ++|+.|+.||+|||||..|+.||..-+.-+
T Consensus         4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil   79 (508)
T KOG0717|consen    4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQIL   79 (508)
T ss_pred             chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHh
Confidence            34678999999999999999999999999999999999975     799999999999999999999998655433

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.71  E-value=2e-17  Score=160.26  Aligned_cols=131  Identities=21%  Similarity=0.411  Sum_probs=92.2

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      +.|.|....-. .....|+.|+|+|.+..      ...+|+.|+|+|+++.             .+|+.|+|.|.+...+
T Consensus       177 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~-------------~~C~~C~G~g~v~~~~  242 (392)
T PRK14279        177 TTCHGSGARPG-TSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE-------------DPCEECKGTGVTTRTR  242 (392)
T ss_pred             CCCccccccCC-CCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC-------------CcCCCCCCCeEEEEee
Confidence            34667666532 34578999999997542      2367999999999765             7899999998764310


Q ss_pred             C----------------------CCCcc--CCCceeEEe-------------------------------------EEEE
Q 019908          205 D----------------------KCPQC--KANKVTQEK-------------------------------------KVLE  223 (334)
Q Consensus       205 ~----------------------~C~~C--~G~g~~~~~-------------------------------------~~~~  223 (334)
                      .                      .-+..  .|.-++.-.                                     ..++
T Consensus       243 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~  322 (392)
T PRK14279        243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVG  322 (392)
T ss_pred             eeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEE
Confidence            0                      00000  111111100                                     0578


Q ss_pred             EEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          224 VHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       224 v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      |+||+|+++|++|+|+|+|++..++..|||||+|+|..|+.+..+...|+.+
T Consensus       323 v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~  374 (392)
T PRK14279        323 VKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLDGAAAEALEA  374 (392)
T ss_pred             EEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            9999999999999999999997666789999999999988777666555544

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.70  E-value=1.2e-17  Score=153.60  Aligned_cols=70  Identities=53%  Similarity=0.825  Sum_probs=64.8

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      +..+|||+||||.++|+..||.+|||++|.+||||...|.       .+|-.|..|-|||+||++|+.||. |++.++
T Consensus       391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD  467 (504)
T KOG0624|consen  391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLD  467 (504)
T ss_pred             hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCC
Confidence            5789999999999999999999999999999999987775       589999999999999999999998 777765

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=7.7e-17  Score=143.26  Aligned_cols=67  Identities=57%  Similarity=0.921  Sum_probs=62.2

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccC
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYG   74 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G   74 (334)
                      +....+||+||||+++|+..||++|||++|++||||+++..     ++|++|++||++|+|+.+|+.||+++
T Consensus         2 ~~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~   73 (237)
T COG2214           2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG   73 (237)
T ss_pred             chhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence            34678999999999999999999999999999999999842     89999999999999999999999973

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.70  E-value=7.9e-17  Score=155.19  Aligned_cols=172  Identities=20%  Similarity=0.372  Sum_probs=109.2

Q ss_pred             CcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeec---------e--e---eeecCcccccccceeeeCCCCCCCC
Q 019908           90 NPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVS---------L--E---DLYNGTTKKLSLSRNILCPKCKGKG  155 (334)
Q Consensus        90 ~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~s---------l--~---e~~~G~~~~i~~~~~~~C~~C~G~G  155 (334)
                      .|.++|++||++++.........++.+....+.++|+..         +  .   ..|.|.... .-.....|+.|+|+|
T Consensus        94 ~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~-~~~~~~~C~~C~G~G  172 (372)
T PRK14300         94 IFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSE-KGETVTTCDACSGVG  172 (372)
T ss_pred             hHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccC-CCCCCccCCCccCeE
Confidence            355788888875321111111123344445555544322         2  2   345666554 223346899999999


Q ss_pred             CccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCC-CCCcc------------------
Q 019908          156 SKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERD-KCPQC------------------  210 (334)
Q Consensus       156 ~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~-~C~~C------------------  210 (334)
                      ....      ...+|+.|+|+|+++.             .+|+.|+|.|++..... ....-                  
T Consensus       173 ~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~  239 (372)
T PRK14300        173 ATRMQQGFFTIEQACHKCQGNGQIIK-------------NPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAG  239 (372)
T ss_pred             EEEEeeceEEEEEeCCCCCccceEeC-------------CCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCC
Confidence            7532      2357999999998765             78999999988642100 00000                  


Q ss_pred             -----CCCceeE-----------------------------------Ee---EEEEEEeccCccCCcEEEEecCcCCCCC
Q 019908          211 -----KANKVTQ-----------------------------------EK---KVLEVHVEKGMQHGQKIAFEGQADEAPD  247 (334)
Q Consensus       211 -----~G~g~~~-----------------------------------~~---~~~~v~Ip~G~~~G~~i~l~g~G~~~~~  247 (334)
                           .|.-++.                                   ..   ..++|+||+|+++|++|+|+|+|++.++
T Consensus       240 ~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~  319 (372)
T PRK14300        240 IRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMR  319 (372)
T ss_pred             CCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCC
Confidence                 0111110                                   00   1689999999999999999999998653


Q ss_pred             -CCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          248 -TITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       248 -~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                       ..+|||||+|+|..|+.|+.++..|+.+
T Consensus       320 ~~~~GDL~V~~~v~~P~~ls~~qk~~l~~  348 (372)
T PRK14300        320 STIRGDMLTHIHVEVPKNLSKRQRELLEE  348 (372)
T ss_pred             CCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence             4689999999999998887776665544

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.69  E-value=1.2e-17  Score=120.49  Aligned_cols=59  Identities=51%  Similarity=0.908  Sum_probs=55.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h----HHHHHHHHHHhhcCCCcccchhc
Q 019908           13 KYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P----EKFKELGQAYEVLSDPEKRDIYD   71 (334)
Q Consensus        13 ~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~----~~f~~i~~Ay~~L~d~~~r~~YD   71 (334)
                      |||+||||+++|+.++||+||+++++++|||+++. .    +.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            68999999999999999999999999999999764 3    69999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=5e-17  Score=141.59  Aligned_cols=66  Identities=50%  Similarity=0.899  Sum_probs=61.5

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh------HHHHHHHHHHhhcCCCcccchhcccCh
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP------EKFKELGQAYEVLSDPEKRDIYDQYGE   75 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~------~~f~~i~~Ay~~L~d~~~r~~YD~~G~   75 (334)
                      ..+|+|+||||.++|+..||++||++||++||||+++..      ++|++|+.||.||+|.++|+.||+.|.
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~   83 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGS   83 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCC
Confidence            455999999999999999999999999999999999743      799999999999999999999999884

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.63  E-value=1.6e-15  Score=146.16  Aligned_cols=131  Identities=22%  Similarity=0.401  Sum_probs=91.9

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      +.|.|....-. .....|+.|+|+|....      ...+|+.|+|+|+++.             .+|+.|+|.|.+...+
T Consensus       154 ~~C~G~G~~~~-~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~~~~~~  219 (372)
T PRK14286        154 VDCNGSGASKG-SSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS-------------NPCKTCGGQGLQEKRR  219 (372)
T ss_pred             CCCcCCCcCCC-CCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec-------------ccCCCCCCCcEEecce
Confidence            34567665422 33468999999996532      2357999999998765             7899999998865311


Q ss_pred             ----------------------CCCCc--cCCCceeEEeE--------------------------------------EE
Q 019908          205 ----------------------DKCPQ--CKANKVTQEKK--------------------------------------VL  222 (334)
Q Consensus       205 ----------------------~~C~~--C~G~g~~~~~~--------------------------------------~~  222 (334)
                                            .+.+.  -.|.-++.-..                                      .+
T Consensus       220 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i  299 (372)
T PRK14286        220 TINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKA  299 (372)
T ss_pred             EEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEE
Confidence                                  01111  11221111111                                      58


Q ss_pred             EEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          223 EVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       223 ~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      +|+||+|+++|++++|+|+|++..+ ...|||||+|+|..|+.++.++.+|+.+
T Consensus       300 ~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~  353 (372)
T PRK14286        300 KMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEE  353 (372)
T ss_pred             EEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHH
Confidence            9999999999999999999998643 4579999999999998877777666544

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.63  E-value=1.9e-15  Score=145.30  Aligned_cols=131  Identities=17%  Similarity=0.372  Sum_probs=93.0

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      +.|.|.... .-.....|+.|+|+|....      .+.+|+.|+|+|+++.             .+|+.|+|.|.+...+
T Consensus       150 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~  215 (365)
T PRK14285        150 ESCLGKKSE-KGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIIS-------------NPCKSCKGKGSLKKKE  215 (365)
T ss_pred             CCCCCcccC-CCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccC-------------CCCCCCCCCCEEeccE
Confidence            346676654 2233467999999996532      2367999999998765             7899999999754310


Q ss_pred             C-----CCCccC-------------------CCceeEEeE--------------------------------------EE
Q 019908          205 D-----KCPQCK-------------------ANKVTQEKK--------------------------------------VL  222 (334)
Q Consensus       205 ~-----~C~~C~-------------------G~g~~~~~~--------------------------------------~~  222 (334)
                      .     +=-.-.                   |.-++.-..                                      .+
T Consensus       216 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v  295 (365)
T PRK14285        216 TIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKI  295 (365)
T ss_pred             EEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEE
Confidence            0     000001                   111111000                                      68


Q ss_pred             EEEeccCccCCcEEEEecCcCCCCCC-CCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          223 EVHVEKGMQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       223 ~v~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      +|+||+|+++|++|+|+|+|++.++. ..|||||+|+|+.|+.|++++..|+.+
T Consensus       296 ~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~  349 (365)
T PRK14285        296 KIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLEN  349 (365)
T ss_pred             EEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999999999999999987544 469999999999999999988877655

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.61  E-value=7.4e-16  Score=109.56  Aligned_cols=55  Identities=69%  Similarity=1.055  Sum_probs=51.0

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----hHHHHHHHHHHhhcCCCcc
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-----PEKFKELGQAYEVLSDPEK   66 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-----~~~f~~i~~Ay~~L~d~~~   66 (334)
                      ++||++|||+++++.++||+||+++++++|||++++     .+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999999984     2899999999999999853

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.60  E-value=3.5e-15  Score=144.45  Aligned_cols=170  Identities=25%  Similarity=0.410  Sum_probs=106.6

Q ss_pred             cchhhccccCCCCCCCCCCCCCCcccccccEEEeeeec---------e--e---eeecCcccccccceeeeCCCCCCCCC
Q 019908           91 PFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVS---------L--E---DLYNGTTKKLSLSRNILCPKCKGKGS  156 (334)
Q Consensus        91 ~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~s---------l--~---e~~~G~~~~i~~~~~~~C~~C~G~G~  156 (334)
                      |.++|+.+||++..... .+..++.+....+.++|+..         +  .   ..|.|..... -.....|+.|+|+|.
T Consensus       106 f~~~F~~~fgg~~~~~~-~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~-~~~~~~C~~C~G~G~  183 (386)
T PRK14277        106 FEDIFGDFFGTGRRRAE-TGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKP-GSKPVTCPVCHGTGQ  183 (386)
T ss_pred             HHHhhcccccCCCcCCC-CCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCC-CCCCccCCCCCCEEE
Confidence            44688888875322111 11223444445555554322         2  2   3356665542 233568999999996


Q ss_pred             ccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCC-CCC----ccC----------
Q 019908          157 KSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERD-KCP----QCK----------  211 (334)
Q Consensus       157 ~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~-~C~----~C~----------  211 (334)
                      ...          ...+|+.|+|+|+++.             .+|+.|+|.|.+...+. ...    .-.          
T Consensus       184 ~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G  250 (386)
T PRK14277        184 VRTRQNTPFGRIVNIRTCDRCHGEGKIIT-------------DPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEG  250 (386)
T ss_pred             EEEEEeccCceEEEEEECCCCCcceeecc-------------CCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEcccc
Confidence            532          1257999999998765             78999999987642100 000    000          


Q ss_pred             ---------CCceeEEeE-------------------------------------EEEEEeccCccCCcEEEEecCcCCC
Q 019908          212 ---------ANKVTQEKK-------------------------------------VLEVHVEKGMQHGQKIAFEGQADEA  245 (334)
Q Consensus       212 ---------G~g~~~~~~-------------------------------------~~~v~Ip~G~~~G~~i~l~g~G~~~  245 (334)
                               |.-++.-..                                     .++|.||+|+++|++++|+|+|++.
T Consensus       251 ~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~~ri~g~G~p~  330 (386)
T PRK14277        251 EPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTGTKFRLRGKGIPH  330 (386)
T ss_pred             ccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCCCEEEECCCCCCC
Confidence                     111111000                                     4689999999999999999999986


Q ss_pred             CC-CCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          246 PD-TITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       246 ~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      .+ ...|||||+|+|.-|+.++.+..+++.+
T Consensus       331 ~~~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~  361 (386)
T PRK14277        331 LRGRGRGDQIVKVYIEVPKKLTEKQKELLRE  361 (386)
T ss_pred             CCCCCCCCEEEEEEEEeCCCCCHHHHHHHHH
Confidence            43 3579999999999888777666655444

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.60  E-value=5.2e-16  Score=134.20  Aligned_cols=71  Identities=39%  Similarity=0.720  Sum_probs=65.1

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHhhcCCCcccchhcccChhh
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQYGEDA   77 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~   77 (334)
                      +.....|+|+||||+|+|+++|||+|||+|+++||||++|+    ++.|.+|++||+.|+|+..|..|..||+..
T Consensus        94 ~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD  168 (230)
T KOG0721|consen   94 RERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD  168 (230)
T ss_pred             HHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence            45577899999999999999999999999999999999865    378999999999999999999999999753

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.58  E-value=9.6e-15  Score=141.67  Aligned_cols=132  Identities=22%  Similarity=0.425  Sum_probs=92.2

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      +.|.|...... .....|+.|+|+|.+..      ...+|+.|+|+|+++.             .+|+.|+|.|++...+
T Consensus       162 ~~C~G~G~~~~-~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~  227 (391)
T PRK14284        162 DACSGSGANSS-QGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT-------------DPCSVCRGQGRIKDKR  227 (391)
T ss_pred             CCCcccccCCC-CCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC-------------CcCCCCCCcceecceE
Confidence            34666665533 23468999999997432      2357999999998764             7899999998753200


Q ss_pred             C-----CCCccC------------------------------------------------------C-CceeEE---eEE
Q 019908          205 D-----KCPQCK------------------------------------------------------A-NKVTQE---KKV  221 (334)
Q Consensus       205 ~-----~C~~C~------------------------------------------------------G-~g~~~~---~~~  221 (334)
                      .     +=-.-.                                                      | ...+..   ...
T Consensus       228 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~  307 (391)
T PRK14284        228 SVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGT  307 (391)
T ss_pred             EEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcE
Confidence            0     000000                                                      1 111110   125


Q ss_pred             EEEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          222 LEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       222 ~~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                      ++|+||+|+++|++++|+|+|++..+ ..+|||||+|+|..|+.++.++.+|+.++
T Consensus       308 i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l  363 (391)
T PRK14284        308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQF  363 (391)
T ss_pred             EEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Confidence            78999999999999999999998653 46899999999999998888887776553

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.58  E-value=3.3e-15  Score=143.92  Aligned_cols=131  Identities=20%  Similarity=0.332  Sum_probs=93.5

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccCC----------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGA----------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~----------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|.|....- -.....|+.|+|+|.....          ..+|+.|+|+|+.+.             .+|+.|+|.|.+
T Consensus       156 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  221 (369)
T PRK14282        156 PHCGGTGVEP-GSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPG-------------EYCHECGGSGRI  221 (369)
T ss_pred             CCCCccCCCC-CCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCC-------------CCCCCCCCceeE
Confidence            3456766542 2335689999999975321          357999999998764             789999999864


Q ss_pred             Ecc-----CCCCCccCC-------------------CceeEEe-------------------------------------
Q 019908          201 ISE-----RDKCPQCKA-------------------NKVTQEK-------------------------------------  219 (334)
Q Consensus       201 ~~~-----~~~C~~C~G-------------------~g~~~~~-------------------------------------  219 (334)
                      ...     .-+=..-.|                   .-++.-.                                     
T Consensus       222 ~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ld  301 (369)
T PRK14282        222 RRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPE  301 (369)
T ss_pred             EEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCC
Confidence            320     000001111                   1111100                                     


Q ss_pred             -EEEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          220 -KVLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       220 -~~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                       ..++|+||+|+++|++|+|+|+|++.. ++.+|||||+|+|..|+.|++++.+|+.+
T Consensus       302 G~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        302 GGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             CcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence             058999999999999999999999864 45689999999999999999999988765

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.58  E-value=3e-15  Score=104.45  Aligned_cols=51  Identities=65%  Similarity=1.053  Sum_probs=48.3

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHhhcCC
Q 019908           13 KYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSD   63 (334)
Q Consensus        13 ~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~~f~~i~~Ay~~L~d   63 (334)
                      |||++|||+++++.++||+|||+|+++||||++++    .+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            69999999999999999999999999999999985    3899999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.57  E-value=7.8e-15  Score=141.37  Aligned_cols=130  Identities=22%  Similarity=0.411  Sum_probs=91.2

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCC
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERD  205 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~  205 (334)
                      .|.|.... .-.....|+.|+|+|....      ...+|+.|+|+|+++.             .+|+.|+|.|++...+.
T Consensus       149 ~C~G~G~~-~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~~  214 (373)
T PRK14301        149 DCGGSGAA-PGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT-------------HPCPKCKGSGIVQQTRE  214 (373)
T ss_pred             CCCCcccC-CCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC-------------CCCCCCCCCceeccceE
Confidence            45665554 2233467999999997542      2367999999998765             78999999987643100


Q ss_pred             ----------------------CCCcc--CCCceeEEeE-------------------------------------EEEE
Q 019908          206 ----------------------KCPQC--KANKVTQEKK-------------------------------------VLEV  224 (334)
Q Consensus       206 ----------------------~C~~C--~G~g~~~~~~-------------------------------------~~~v  224 (334)
                                            +....  .|.-++.-..                                     .++|
T Consensus       215 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v  294 (373)
T PRK14301        215 LKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTL  294 (373)
T ss_pred             EEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEE
Confidence                                  00000  0111111110                                     5889


Q ss_pred             EeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          225 HVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       225 ~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      +||+|+++|++++|+|+|++.++ ...|||||+|+|..|+.++.+..+|+.+
T Consensus       295 ~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l~~  346 (373)
T PRK14301        295 DIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLRE  346 (373)
T ss_pred             EECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999999999999999754 3579999999999998888877766654

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.56  E-value=1.5e-14  Score=140.50  Aligned_cols=129  Identities=19%  Similarity=0.353  Sum_probs=89.5

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      .|.|....-.  ....|+.|+|+|....          ...+|+.|+|+|+++.             .+|+.|+|.|.+.
T Consensus       168 ~C~G~G~~~~--~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~  232 (397)
T PRK14281        168 ECNGTGSKTG--ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVK-------------DRCPACYGEGIKQ  232 (397)
T ss_pred             CCCCcccCCC--CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeC-------------CCCCCCCCCccEe
Confidence            4567655533  4568999999996532          1357999999998765             7899999998764


Q ss_pred             ccCC-----CCCccC-------------------CCceeEEeE-------------------------------------
Q 019908          202 SERD-----KCPQCK-------------------ANKVTQEKK-------------------------------------  220 (334)
Q Consensus       202 ~~~~-----~C~~C~-------------------G~g~~~~~~-------------------------------------  220 (334)
                      ..+.     +=-.-.                   |.-++.-..                                     
T Consensus       233 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg  312 (397)
T PRK14281        233 GEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDG  312 (397)
T ss_pred             cceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCc
Confidence            3100     000000                   110111000                                     


Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      .++|+||+|+++|++++|+|+|++... +..|||||+|+|.-|+.++.+...|+.+
T Consensus       313 ~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~  368 (397)
T PRK14281        313 AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKELLKE  368 (397)
T ss_pred             cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            578999999999999999999998643 4579999999999888777666655544

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=8.2e-15  Score=141.35  Aligned_cols=132  Identities=20%  Similarity=0.393  Sum_probs=92.9

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|.|...... .....|+.|+|+|....          ...+|+.|+|+|+++.             .+|+.|+|.|.+
T Consensus       145 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  210 (377)
T PRK14298        145 STCSGTGAKPG-TSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIE-------------SPCPVCSGTGKV  210 (377)
T ss_pred             CCCCCCcccCC-CCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccC-------------CCCCCCCCccEE
Confidence            34566655422 33467999999996532          1357999999998764             789999999976


Q ss_pred             EccCC-----CCCccCCCceeEE-------------------eE------------------------------------
Q 019908          201 ISERD-----KCPQCKANKVTQE-------------------KK------------------------------------  220 (334)
Q Consensus       201 ~~~~~-----~C~~C~G~g~~~~-------------------~~------------------------------------  220 (334)
                      ...+.     +=-.-.|..++..                   ..                                    
T Consensus       211 ~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  290 (377)
T PRK14298        211 RKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLY  290 (377)
T ss_pred             EEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCC
Confidence            43100     0000011111100                   00                                    


Q ss_pred             -EEEEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          221 -VLEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       221 -~~~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                       .++|+||+|+++|++++|+|+|++..+ ...|||||+|+|..|+.|++++.+|+.++
T Consensus       291 G~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        291 GKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             CCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence             578999999999999999999998643 45799999999999999999998887663

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.54  E-value=3.3e-14  Score=137.46  Aligned_cols=130  Identities=22%  Similarity=0.330  Sum_probs=88.3

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      .|.|....- -.....|+.|+|+|....          ...+|+.|+|+|.++.             .+|+.|+|.|.+.
T Consensus       153 ~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~  218 (380)
T PRK14297        153 TCNGTGAKP-GTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIE-------------DPCNKCHGKGKVR  218 (380)
T ss_pred             CcccccccC-CCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcC-------------CCCCCCCCCeEEE
Confidence            456665542 223567999999996531          2357999999998764             7899999998543


Q ss_pred             ccC-----CCCCccC-------------------CCceeEEeE-------------------------------------
Q 019908          202 SER-----DKCPQCK-------------------ANKVTQEKK-------------------------------------  220 (334)
Q Consensus       202 ~~~-----~~C~~C~-------------------G~g~~~~~~-------------------------------------  220 (334)
                      ...     -+=..-.                   |.-++.-..                                     
T Consensus       219 ~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg  298 (380)
T PRK14297        219 KNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDG  298 (380)
T ss_pred             eEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCC
Confidence            200     0000001                   111110000                                     


Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      .++|+||+|+++|++++|+|+|++.. ++..|||||+|+|.-|+.++.+...|+.+
T Consensus       299 ~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l~~  354 (380)
T PRK14297        299 EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKEALTM  354 (380)
T ss_pred             cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHH
Confidence            57899999999999999999999864 34579999999999888777666555443

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.53  E-value=2.9e-14  Score=138.23  Aligned_cols=129  Identities=22%  Similarity=0.383  Sum_probs=87.5

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccCC----------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSGA----------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~~----------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      .|.|..... -.....|+.|+|+|.....          ..+|+.|+|+|+++.             .+|+.|+|.|.+.
T Consensus       159 ~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~  224 (386)
T PRK14289        159 HCHGTGAEG-NNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIK-------------KKCKKCGGEGIVY  224 (386)
T ss_pred             CCCCCCCCC-CCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccC-------------cCCCCCCCCcEEe
Confidence            345555442 2345779999999976421          257999999998764             7899999998754


Q ss_pred             ccC----------------------CCCCc--cCCCceeEEe-------------------------------------E
Q 019908          202 SER----------------------DKCPQ--CKANKVTQEK-------------------------------------K  220 (334)
Q Consensus       202 ~~~----------------------~~C~~--C~G~g~~~~~-------------------------------------~  220 (334)
                      ...                      .+...  =.|.-++.-.                                     .
T Consensus       225 ~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg  304 (386)
T PRK14289        225 GEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDG  304 (386)
T ss_pred             eeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCc
Confidence            210                      00000  0011111100                                     0


Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYV  274 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~  274 (334)
                      .++|.||+|+++|++++|+|+|.+.+ ++..|||||+|+|+-|..++.+...|+.
T Consensus       305 ~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~  359 (386)
T PRK14289        305 KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQTLE  359 (386)
T ss_pred             eEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHHHHHH
Confidence            68999999999999999999999864 3468999999999988766666555443

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.53  E-value=1.4e-14  Score=139.29  Aligned_cols=130  Identities=21%  Similarity=0.431  Sum_probs=93.4

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      .|.|......  ....|+.|+|+|....          ...+|+.|+|+|+++.             .+|+.|+|.|.+.
T Consensus       154 ~C~G~g~~~~--~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~  218 (365)
T PRK14290        154 DCSGTGAKNG--KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPE-------------EKCPRCNGTGTVV  218 (365)
T ss_pred             CCccccCCCC--CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEcc-------------CCCCCCCCceeEE
Confidence            4666665432  4568999999996431          1257999999998754             7899999998854


Q ss_pred             ccC-----CCCCccCC-----------------CceeEEe-------------------------------------EEE
Q 019908          202 SER-----DKCPQCKA-----------------NKVTQEK-------------------------------------KVL  222 (334)
Q Consensus       202 ~~~-----~~C~~C~G-----------------~g~~~~~-------------------------------------~~~  222 (334)
                      ...     -+=-.-.|                 .-++.-.                                     ..+
T Consensus       219 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i  298 (365)
T PRK14290        219 VNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKY  298 (365)
T ss_pred             EeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceE
Confidence            200     00000011                 1011000                                     068


Q ss_pred             EEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          223 EVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       223 ~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                      +|+||+|+++|++|+|+|+|++.++ ..+|||||+|+|..|+.|++++.+|+.++
T Consensus       299 ~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        299 NLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999998654 35899999999999999999999988763

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.53  E-value=1.3e-14  Score=139.65  Aligned_cols=130  Identities=22%  Similarity=0.401  Sum_probs=92.6

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCC
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERD  205 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~  205 (334)
                      .|.|..... -.....|+.|+|+|....      ...+|+.|+|+|+.+.             .+|+.|+|.|.+.... 
T Consensus       149 ~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v~~~~-  213 (366)
T PRK14294        149 ECHGSGCEP-GTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV-------------SPCKTCHGQGRVRVSK-  213 (366)
T ss_pred             CCCCccccC-CCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC-------------cCCCCCCCceEeecce-
Confidence            356655542 223568999999997542      2357999999998764             7899999998764310 


Q ss_pred             CCCc------cC-------------------CCceeEEeE-------------------------------------EEE
Q 019908          206 KCPQ------CK-------------------ANKVTQEKK-------------------------------------VLE  223 (334)
Q Consensus       206 ~C~~------C~-------------------G~g~~~~~~-------------------------------------~~~  223 (334)
                      .-..      -.                   |.-++.-..                                     .++
T Consensus       214 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~  293 (366)
T PRK14294        214 TVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERE  293 (366)
T ss_pred             eEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEE
Confidence            0000      00                   110111000                                     568


Q ss_pred             EEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          224 VHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       224 v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                      |+||+|+++|++|+|+|+|++.++ ..+|||||+|+|..|+.|++++.+|+.++
T Consensus       294 v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~  347 (366)
T PRK14294        294 LKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEF  347 (366)
T ss_pred             EEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            999999999999999999998654 35899999999999999999988887663

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=6.5e-15  Score=138.39  Aligned_cols=88  Identities=50%  Similarity=0.927  Sum_probs=74.0

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCC
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGM   82 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~   82 (334)
                      ++..+|||+|||++.+|+..|||+|||++|+.||||++...     .+|+++.+||.+|+|+.+|..||. |.+--+.+ 
T Consensus       369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds-g~dle~~~-  446 (486)
T KOG0550|consen  369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS-GQDLEEVG-  446 (486)
T ss_pred             HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc-ccchhhhc-
Confidence            46789999999999999999999999999999999998643     689999999999999999999998 43322222 


Q ss_pred             CCCCCCCCcchhhccc
Q 019908           83 GGAGAAHNPFDIFESF   98 (334)
Q Consensus        83 ~~~~~~~~~~d~f~~~   98 (334)
                       +++++.+|+++|..|
T Consensus       447 -~~~a~~dp~~~~~a~  461 (486)
T KOG0550|consen  447 -SGGAGFDPFNIFRAF  461 (486)
T ss_pred             -CCCcCcChhhhhhhc
Confidence             233667888888877

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.52  E-value=1.5e-14  Score=114.96  Aligned_cols=57  Identities=25%  Similarity=0.514  Sum_probs=52.7

Q ss_pred             CCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcC
Q 019908            6 PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLS   62 (334)
Q Consensus         6 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~   62 (334)
                      .+.+...++|+||||+++|+.+|||+|||+|++++|||++++++.|++|++||++|.
T Consensus        59 ~~~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs~~~~~kIneAyevL~  115 (116)
T PTZ00100         59 ENPMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLLL  115 (116)
T ss_pred             cCCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            345567899999999999999999999999999999999888899999999999985

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=99.51  E-value=4.6e-14  Score=102.34  Aligned_cols=65  Identities=43%  Similarity=0.977  Sum_probs=51.6

Q ss_pred             CCCCCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCc
Q 019908          148 CPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANK  214 (334)
Q Consensus       148 C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g  214 (334)
                      |+.|+|+|..... ..+|+.|+|+|+++..++ .++++++++.+|+.|+|+|+++ ..++|+.|+|+|
T Consensus         1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~-~~~~~~~~~~~C~~C~G~G~~i-~~~~C~~C~G~g   66 (66)
T PF00684_consen    1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQ-TPGGVFQMQQTCPKCGGTGKII-EKDPCKTCKGSG   66 (66)
T ss_dssp             -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEE-SSSTTEEEEEE-TTTSSSSEE--TSSB-SSSTTSS
T ss_pred             CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEe-CCCeEEEEEEECCCCcceeeEE-CCCCCCCCCCcC
Confidence            8999999996654 568999999999999888 6677778899999999999999 569999999975

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=4.2e-14  Score=136.48  Aligned_cols=132  Identities=19%  Similarity=0.335  Sum_probs=92.8

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|.|...... .....|+.|+|+|....          ...+|+.|+|+|+.+.             .+|+.|.|.|++
T Consensus       147 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  212 (374)
T PRK14293        147 ETCRGSGAKPG-TGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIE-------------DPCDACGGQGVK  212 (374)
T ss_pred             CCCCCcCCCCC-CCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEec-------------cCCCCCCCCccc
Confidence            34566555432 23467999999997431          1257999999999765             789999999875


Q ss_pred             EccCC-CCCcc-----------------------CCCceeEEeE------------------------------------
Q 019908          201 ISERD-KCPQC-----------------------KANKVTQEKK------------------------------------  220 (334)
Q Consensus       201 ~~~~~-~C~~C-----------------------~G~g~~~~~~------------------------------------  220 (334)
                      ..... ....=                       .|.-++.-..                                    
T Consensus       213 ~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld  292 (374)
T PRK14293        213 QVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVD  292 (374)
T ss_pred             ccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCC
Confidence            43111 00000                       0111111100                                    


Q ss_pred             -EEEEEeccCccCCcEEEEecCcCCCCCC--CCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          221 -VLEVHVEKGMQHGQKIAFEGQADEAPDT--ITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       221 -~~~v~Ip~G~~~G~~i~l~g~G~~~~~~--~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                       .++|+||+|+++|++++|+|+|++.+++  ..|||||+|+|..|+.|++++.+|+.++
T Consensus       293 G~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l  351 (374)
T PRK14293        293 GPVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKL  351 (374)
T ss_pred             CCEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence             5789999999999999999999986543  4799999999999999999998887663

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.50  E-value=3.7e-14  Score=137.38  Aligned_cols=131  Identities=21%  Similarity=0.391  Sum_probs=92.0

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      +.|.|....- -.....|+.|+|+|....      ...+|+.|+|+|+++.             .+|+.|.|.|++...+
T Consensus       170 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~~~~~~  235 (389)
T PRK14295        170 PACSGTGAKN-GTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIAD-------------DPCLVCKGSGRAKSSR  235 (389)
T ss_pred             CCCcccccCC-CCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEec-------------cCCCCCCCCceEeeee
Confidence            4566766552 233568999999997432      2357999999999765             7899999998754310


Q ss_pred             C----------------------CCCc--cCCCceeEEe--------------------------------------EEE
Q 019908          205 D----------------------KCPQ--CKANKVTQEK--------------------------------------KVL  222 (334)
Q Consensus       205 ~----------------------~C~~--C~G~g~~~~~--------------------------------------~~~  222 (334)
                      .                      +...  -.|.-++.-.                                      +.+
T Consensus       236 ~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~  315 (389)
T PRK14295        236 TMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPV  315 (389)
T ss_pred             EEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEE
Confidence            0                      0000  0011111100                                      168


Q ss_pred             EEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          223 EVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       223 ~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      +|+||+|+++|++|+|+|+|++..++..|||||+|+|.-|+.+..+...|+.+
T Consensus       316 ~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~~Ls~~qk~~l~~  368 (389)
T PRK14295        316 TVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKDLSGKAREALEA  368 (389)
T ss_pred             EEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            99999999999999999999997666789999999999888777666665544

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.49  E-value=4.1e-14  Score=136.31  Aligned_cols=132  Identities=19%  Similarity=0.334  Sum_probs=92.2

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.|.|.... .-.....|+.|+|+|....          ...+|+.|+|+|+++.             .+|+.|+|.|.+
T Consensus       142 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  207 (371)
T PRK14287        142 GTCHGSGAK-PGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIK-------------QKCATCGGKGKV  207 (371)
T ss_pred             CCCCCcccC-CCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcccc-------------ccCCCCCCeeEE
Confidence            446676654 2334568999999996532          1257999999998765             789999999865


Q ss_pred             EccC-----C-----------------CCCc--cCCCceeEEeE------------------------------------
Q 019908          201 ISER-----D-----------------KCPQ--CKANKVTQEKK------------------------------------  220 (334)
Q Consensus       201 ~~~~-----~-----------------~C~~--C~G~g~~~~~~------------------------------------  220 (334)
                      ....     -                 +-..  =.|.-++.-..                                    
T Consensus       208 ~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ld  287 (371)
T PRK14287        208 RKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLN  287 (371)
T ss_pred             eeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCC
Confidence            3200     0                 0000  00111111000                                    


Q ss_pred             -EEEEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          221 -VLEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       221 -~~~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                       .++|+||+|+++|++++|+|+|++..+ ...|||||+|+|..|+.|+++...|+.++
T Consensus       288 g~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l  345 (371)
T PRK14287        288 GKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREF  345 (371)
T ss_pred             CCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHH
Confidence             578999999999999999999998643 45799999999999999998887776653

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.49  E-value=5.7e-14  Score=135.66  Aligned_cols=131  Identities=22%  Similarity=0.387  Sum_probs=90.5

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.|.|....- -.....|+.|+|+|....          ...+|+.|+|+|+++.             .+|+.|+|.|++
T Consensus       143 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  208 (378)
T PRK14278        143 DRCHGKGTAG-DSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIP-------------DPCHECAGDGRV  208 (378)
T ss_pred             CCCcCccCCC-CCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeC-------------CCCCCCCCceeE
Confidence            3466666542 234568999999997431          1357999999999765             789999999875


Q ss_pred             EccCC----------------------CCC--ccCCCceeEE--------------------------------------
Q 019908          201 ISERD----------------------KCP--QCKANKVTQE--------------------------------------  218 (334)
Q Consensus       201 ~~~~~----------------------~C~--~C~G~g~~~~--------------------------------------  218 (334)
                      ...+.                      .-+  .-.|.-++.-                                      
T Consensus       209 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  288 (378)
T PRK14278        209 RARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAIL  288 (378)
T ss_pred             ecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCC
Confidence            43100                      000  0001111111                                      


Q ss_pred             eEEEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          219 KKVLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       219 ~~~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      ...++|+||+|+++|++++|+|+|++.. +...|||||+|+|.-|+.++.+...|+.+
T Consensus       289 ~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~  346 (378)
T PRK14278        289 DGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIELLRE  346 (378)
T ss_pred             CCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence            1168899999999999999999999864 34579999999999888777766655544

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=7.4e-14  Score=134.50  Aligned_cols=131  Identities=17%  Similarity=0.355  Sum_probs=89.1

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccCC----------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGA----------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~----------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|.|...... .....|+.|+|+|.....          ..+|+.|+|+|+++.             .+|+.|+|.|.+
T Consensus       153 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  218 (372)
T PRK14296        153 SKCFGSGAESN-SDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIK-------------NKCKNCKGKGKY  218 (372)
T ss_pred             CCCCCCccCCC-CCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeec-------------ccccCCCCceEE
Confidence            44566655422 334679999999975421          257999999999765             789999999865


Q ss_pred             EccC----------------------CCCCcc--CCCceeEEeE------------------------------------
Q 019908          201 ISER----------------------DKCPQC--KANKVTQEKK------------------------------------  220 (334)
Q Consensus       201 ~~~~----------------------~~C~~C--~G~g~~~~~~------------------------------------  220 (334)
                      ...+                      .....=  .|.-++.-..                                    
T Consensus       219 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tl  298 (372)
T PRK14296        219 LERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTL  298 (372)
T ss_pred             EEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCC
Confidence            3200                      000000  0110110000                                    


Q ss_pred             --EEEEEeccCccCCcEEEEecCcCCCC--CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 --VLEVHVEKGMQHGQKIAFEGQADEAP--DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 --~~~v~Ip~G~~~G~~i~l~g~G~~~~--~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                        .++|+||+++++|++++|+|+|++..  .+..|||||+|+|.-|+.++.+...|+.+
T Consensus       299 dG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~  357 (372)
T PRK14296        299 DGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQ  357 (372)
T ss_pred             CCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence              57899999999999999999999842  34579999999999888777666655443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.47  E-value=2e-13  Score=132.07  Aligned_cols=117  Identities=25%  Similarity=0.398  Sum_probs=79.8

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC-
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER-  204 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~-  204 (334)
                      .|.|..... -.....|+.|+|+|....      ...+|+.|+|+|. +.             .+|+.|+|.|.+...+ 
T Consensus       161 ~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~-------------~~C~~C~G~g~v~~~~~  225 (382)
T PRK14291        161 ACGGTGYDP-GSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LR-------------EPCSKCNGRGLVIKKET  225 (382)
T ss_pred             CCccccCCC-CCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-Ec-------------cCCCCCCCCceEEeeeE
Confidence            356655542 234567999999997532      2367999999994 32             7899999998754200 


Q ss_pred             ----CCCCccCCC-------------------ceeEEe--------------------------------------EEEE
Q 019908          205 ----DKCPQCKAN-------------------KVTQEK--------------------------------------KVLE  223 (334)
Q Consensus       205 ----~~C~~C~G~-------------------g~~~~~--------------------------------------~~~~  223 (334)
                          -+=-.-.|.                   -++.-.                                      ..++
T Consensus       226 l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~  305 (382)
T PRK14291        226 IKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEK  305 (382)
T ss_pred             EEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEE
Confidence                000000111                   011000                                      0589


Q ss_pred             EEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCC
Q 019908          224 VHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHP  263 (334)
Q Consensus       224 v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~  263 (334)
                      |+||+|+++|++|+|+|+|++.++ ..+|||||+|+|.-|.
T Consensus       306 V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P~  346 (382)
T PRK14291        306 VKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPK  346 (382)
T ss_pred             EEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence            999999999999999999998654 4679999999999876

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.46  E-value=7.5e-14  Score=134.96  Aligned_cols=131  Identities=21%  Similarity=0.353  Sum_probs=90.2

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.|.|....-. .....|+.|+|+|.+..          ...+|+.|+|+|+++.             .+|+.|+|.|++
T Consensus       150 ~~C~G~G~~~~-~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~~  215 (380)
T PRK14276        150 HTCNGSGAKPG-TSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIK-------------EPCQTCHGTGHE  215 (380)
T ss_pred             CCCcCcccCCC-CCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcccc-------------CCCCCCCCceEE
Confidence            34667665432 33468999999997532          1357999999998765             789999999875


Q ss_pred             EccC----------------------CCCC--ccCCCceeEEeE------------------------------------
Q 019908          201 ISER----------------------DKCP--QCKANKVTQEKK------------------------------------  220 (334)
Q Consensus       201 ~~~~----------------------~~C~--~C~G~g~~~~~~------------------------------------  220 (334)
                      ....                      .+..  .-.|.-++.-..                                    
T Consensus       216 ~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld  295 (380)
T PRK14276        216 KQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVH  295 (380)
T ss_pred             EEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCC
Confidence            4200                      0000  001111111110                                    


Q ss_pred             -EEEEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 -VLEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 -~~~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                       .++|+||+|+++|++++|+|+|++..+ ..+|||||+|+|..|+.+..+...|+.+
T Consensus       296 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~  352 (380)
T PRK14276        296 GDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEALKA  352 (380)
T ss_pred             CcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence             578999999999999999999999753 4579999999999988777666555444

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.46  E-value=8.4e-14  Score=133.61  Aligned_cols=130  Identities=19%  Similarity=0.397  Sum_probs=89.8

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|.|....- -.....|+.|+|+|....          ...+|+.|+|+|+.+.             .+|+.|.|.|.+
T Consensus       147 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  212 (354)
T TIGR02349       147 ETCHGTGAKP-GTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIK-------------EPCSTCKGKGRV  212 (354)
T ss_pred             CCCCCCCCCC-CCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecC-------------CCCCCCCCCcEe
Confidence            3456655442 223567999999996431          1257999999998764             789999999875


Q ss_pred             EccCC----------------------CCCc--cCCCceeEEe-------------------------------------
Q 019908          201 ISERD----------------------KCPQ--CKANKVTQEK-------------------------------------  219 (334)
Q Consensus       201 ~~~~~----------------------~C~~--C~G~g~~~~~-------------------------------------  219 (334)
                      .....                      ....  =.|.-++.-.                                     
T Consensus       213 ~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ld  292 (354)
T TIGR02349       213 KERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLD  292 (354)
T ss_pred             cccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCC
Confidence            43110                      0100  0011111100                                     


Q ss_pred             EEEEEEeccCccCCcEEEEecCcCCCCCC-CCcCEEEEEEEEeCCCceeecCcEEE
Q 019908          220 KVLEVHVEKGMQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYV  274 (334)
Q Consensus       220 ~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~i~v~~~~~f~r~g~dL~~  274 (334)
                      ..++|.||+|+++|++++|+|+|++.+++ .+|||||+|+|..|+.|++++.+++.
T Consensus       293 G~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l~  348 (354)
T TIGR02349       293 GDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELLE  348 (354)
T ss_pred             ceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence            15789999999999999999999986543 68999999999999988887766543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.46  E-value=1.1e-13  Score=133.54  Aligned_cols=131  Identities=21%  Similarity=0.411  Sum_probs=89.8

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.|.|....- -.....|+.|+|+|....          ...+|+.|+|+|+++.             .+|+.|+|.|++
T Consensus       147 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  212 (376)
T PRK14280        147 DTCHGSGAKP-GTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIK-------------EKCPTCHGKGKV  212 (376)
T ss_pred             CCCCCcccCC-CCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceec-------------CCCCCCCCceEE
Confidence            3456665542 234567999999996431          2357999999998764             789999999875


Q ss_pred             EccC----------------------CCCC--ccCCCceeEEeE------------------------------------
Q 019908          201 ISER----------------------DKCP--QCKANKVTQEKK------------------------------------  220 (334)
Q Consensus       201 ~~~~----------------------~~C~--~C~G~g~~~~~~------------------------------------  220 (334)
                      ...+                      .+..  .-.|.-++.-..                                    
T Consensus       213 ~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld  292 (376)
T PRK14280        213 RKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLH  292 (376)
T ss_pred             EEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCC
Confidence            4210                      0000  011111111111                                    


Q ss_pred             -EEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 -VLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 -~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                       .++|+||+|+++|++++|+|+|++.. +...|||||+|+|..|+.++.+...|+.+
T Consensus       293 g~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~  349 (376)
T PRK14280        293 GKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKELLRE  349 (376)
T ss_pred             ceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence             57899999999999999999999864 34679999999999888777666555444

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.43  E-value=1.4e-13  Score=118.33  Aligned_cols=61  Identities=25%  Similarity=0.459  Sum_probs=54.9

Q ss_pred             cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           12 TKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        12 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .|||++|||++.  ++..+|+++||+++++||||+.++.         +.|+.||+||++|+||.+|+.|+.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            489999999996  6789999999999999999996532         478999999999999999999985

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.42  E-value=1.3e-13  Score=117.96  Aligned_cols=61  Identities=33%  Similarity=0.476  Sum_probs=55.5

Q ss_pred             cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           12 TKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        12 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .|||++|||++.  ++..+|+++||+++++||||++.+.       +.+..||+||++|+||.+|+.|+.
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            589999999997  7899999999999999999998754       347899999999999999999985

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.42  E-value=3.1e-13  Score=131.71  Aligned_cols=132  Identities=17%  Similarity=0.304  Sum_probs=89.0

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|.|....-  .....|+.|+|+|....          ...+|+.|+|+|+++..           ..+|+.|+|.|++
T Consensus       154 ~~C~G~G~~~--~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~-----------~~~C~~C~G~g~v  220 (421)
T PTZ00037        154 ANCEGHGGPK--DAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPE-----------SKKCKNCSGKGVK  220 (421)
T ss_pred             cccCCCCCCC--CCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccc-----------cccCCcCCCccee
Confidence            4567766542  24578999999996321          23579999999987641           2689999999876


Q ss_pred             EccCC-----CCCccCCCce------------------eEEeE-------------------------------------
Q 019908          201 ISERD-----KCPQCKANKV------------------TQEKK-------------------------------------  220 (334)
Q Consensus       201 ~~~~~-----~C~~C~G~g~------------------~~~~~-------------------------------------  220 (334)
                      ...+.     +=-.-.|..+                  +.-..                                     
T Consensus       221 ~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG  300 (421)
T PTZ00037        221 KTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDG  300 (421)
T ss_pred             eeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCC
Confidence            43100     0000011111                  11000                                     


Q ss_pred             -EEEEEeccC--ccCCcEEEEecCcCCCCC--CCCcCEEEEEEEEeC--CCceeecCcEEEE
Q 019908          221 -VLEVHVEKG--MQHGQKIAFEGQADEAPD--TITGDIVFILQLKEH--PKFKRKFDDLYVD  275 (334)
Q Consensus       221 -~~~v~Ip~G--~~~G~~i~l~g~G~~~~~--~~~GDL~v~i~v~~~--~~f~r~g~dL~~~  275 (334)
                       .++|+||+|  +++|++++|+|+|++..+  +..|||||+|+|.-|  ..++.+...|+.+
T Consensus       301 ~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~  362 (421)
T PTZ00037        301 RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKS  362 (421)
T ss_pred             CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHH
Confidence             588999999  999999999999998643  357999999999988  7666665554433

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.40  E-value=8.3e-14  Score=122.92  Aligned_cols=63  Identities=41%  Similarity=0.776  Sum_probs=59.4

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhccc
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQY   73 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~   73 (334)
                      ..|.|++|||+++|+.+||++|||+||++||||+++++   +.|..|.+||++|.|.+.|..||-+
T Consensus        32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHH
Confidence            46899999999999999999999999999999999876   6899999999999999999999964

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.40  E-value=5.9e-13  Score=100.61  Aligned_cols=61  Identities=31%  Similarity=0.401  Sum_probs=46.9

Q ss_pred             cEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc-----------CCCCCccEEEEEEEEEee
Q 019908          271 DLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF-----------DNFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       271 dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~-----------~~~~~GdL~v~~~V~~p~  333 (334)
                      ||+++++||++||++|++++|+|+||+.+.|++|++  +++|...           .++.+|||||+|+|.||-
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~--~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~   72 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPG--TQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK   72 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST---STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCc--cCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence            799999999999999999999999999899999876  4454432           234799999999999994

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=4.8e-13  Score=129.10  Aligned_cols=131  Identities=21%  Similarity=0.393  Sum_probs=92.8

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccCC----------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGA----------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~----------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.|.|............|+.|+|+|.....          ..+|+.|+|+|..+.             .+|+.|.|.|++
T Consensus       143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  209 (371)
T PRK14292        143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIIT-------------DPCTVCRGRGRT  209 (371)
T ss_pred             CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecC-------------CCCCCCCCceEE
Confidence            456777665444446789999999975421          257999999998754             889999999876


Q ss_pred             EccCCCCC------c-------cC----------CCceeEEeE-------------------------------------
Q 019908          201 ISERDKCP------Q-------CK----------ANKVTQEKK-------------------------------------  220 (334)
Q Consensus       201 ~~~~~~C~------~-------C~----------G~g~~~~~~-------------------------------------  220 (334)
                      .... ...      .       -.          |.-++.-..                                     
T Consensus       210 ~~~~-~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG  288 (371)
T PRK14292        210 LKAE-TVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDG  288 (371)
T ss_pred             eecc-eEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCC
Confidence            4310 000      0       00          111111100                                     


Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      ..+|+||+|+++|++++|+|+|++.+ +..+|||||+|+|+.|+.|+.+...|+.+
T Consensus       289 ~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~  344 (371)
T PRK14292        289 PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREALEA  344 (371)
T ss_pred             CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            35799999999999999999999864 44579999999999999888877766653

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.37  E-value=6.6e-13  Score=114.57  Aligned_cols=63  Identities=27%  Similarity=0.426  Sum_probs=55.8

Q ss_pred             CccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           10 NNTKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        10 ~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      ...|||++|||++.  ++..+|+++||+|+++||||+++..         +.++.||+||++|+||.+|+.|+.
T Consensus         4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            34799999999996  5789999999999999999997632         346899999999999999999995

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.36  E-value=7.9e-13  Score=113.63  Aligned_cols=63  Identities=29%  Similarity=0.469  Sum_probs=56.9

Q ss_pred             CccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           10 NNTKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        10 ~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      ...|||++||+++.  .+..+|+++||+|+++||||++.+.         +.|..||+||++|+||.+|+.|+.
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            56899999999997  5679999999999999999997532         479999999999999999999995

>PHA02624 large T antigen; Provisional

Probab=99.33  E-value=6.6e-13  Score=132.11  Aligned_cols=63  Identities=33%  Similarity=0.550  Sum_probs=59.7

Q ss_pred             CCCccccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchh
Q 019908            8 RSNNTKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIY   70 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a--~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~Y   70 (334)
                      ..+.+++|++|||+++|  +.+|||+|||++|++||||+++++++|++|++||++|+|+.+|..|
T Consensus         7 ree~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624          7 REESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             hHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcHHHhhhc
Confidence            34567999999999999  9999999999999999999999999999999999999999999998

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=3.2e-12  Score=123.65  Aligned_cols=131  Identities=21%  Similarity=0.383  Sum_probs=88.9

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      +.|.|....- -.....|+.|+|+|....          ...+|+.|+|+|+.+.             .+|..|+|.|.+
T Consensus       150 ~~C~G~G~~~-~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~g~v  215 (378)
T PRK14283        150 PVCNGSRAEP-GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVE-------------KPCSNCHGKGVV  215 (378)
T ss_pred             CCCCccccCC-CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecC-------------CCCCCCCCceee
Confidence            3466765542 223467999999997531          1257999999998764             789999999875


Q ss_pred             EccCC----------------------CCC--ccCCCceeEEeE------------------------------------
Q 019908          201 ISERD----------------------KCP--QCKANKVTQEKK------------------------------------  220 (334)
Q Consensus       201 ~~~~~----------------------~C~--~C~G~g~~~~~~------------------------------------  220 (334)
                      .....                      +..  .=.|.-++.-..                                    
T Consensus       216 ~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tld  295 (378)
T PRK14283        216 RETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTID  295 (378)
T ss_pred             ccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCC
Confidence            43100                      000  001111111000                                    


Q ss_pred             -EEEEEeccCccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 -VLEVHVEKGMQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 -~~~v~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                       .++|.||+|+++|++++|+|+|++.. +...|||||+|+|.-|+.++.+...|+.+
T Consensus       296 G~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~ll~~  352 (378)
T PRK14283        296 GPVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLRE  352 (378)
T ss_pred             ceEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHH
Confidence             57899999999999999999999864 34679999999999887776666555544

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.31  E-value=9.9e-13  Score=125.04  Aligned_cols=67  Identities=45%  Similarity=0.661  Sum_probs=62.6

Q ss_pred             CCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcc
Q 019908            6 PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus         6 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .+..+.+|.|.+|||++++|+++||+.||++|...|||||..+   |.|+.+..|||+|+|+++|+.||.
T Consensus       229 ~re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~  298 (490)
T KOG0720|consen  229 SRELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDL  298 (490)
T ss_pred             hhhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence            3455689999999999999999999999999999999999765   899999999999999999999997

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.22  E-value=8.6e-12  Score=114.85  Aligned_cols=56  Identities=39%  Similarity=0.612  Sum_probs=49.8

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----------hHHHHHHHHHHhhcCC
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-----------PEKFKELGQAYEVLSD   63 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-----------~~~f~~i~~Ay~~L~d   63 (334)
                      ..+..++|++|||+++||.+|||+|||+|+++||||++.+           .++|++|++||++|+.
T Consensus       196 ~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        196 GPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             CCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            3466899999999999999999999999999999999632           1799999999999974

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.06  E-value=7.3e-11  Score=111.94  Aligned_cols=68  Identities=40%  Similarity=0.706  Sum_probs=62.0

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---h------HHHHHHHHHHhhcCCCcccchhcccChhh
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD---P------EKFKELGQAYEVLSDPEKRDIYDQYGEDA   77 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~---~------~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~   77 (334)
                      .--|+|+|||++.+++..+||++||+|+.|||||+-+.   .      +++.+|++||+.|+|...|+.|-.||...
T Consensus        96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd  172 (610)
T COG5407          96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPD  172 (610)
T ss_pred             cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCC
Confidence            34689999999999999999999999999999999764   1      78999999999999999999999998643

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=98.89  E-value=1.8e-09  Score=92.92  Aligned_cols=61  Identities=20%  Similarity=0.264  Sum_probs=54.1

Q ss_pred             cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           12 TKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        12 ~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .|||++||+++.  .+..++++.||+|.+++|||+....         +.-..||+||.+|.||-+|+.|=-
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL   73 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII   73 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence            589999999986  7899999999999999999996432         457889999999999999998864

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.89  E-value=6.2e-10  Score=84.06  Aligned_cols=50  Identities=20%  Similarity=0.430  Sum_probs=38.5

Q ss_pred             EEEEEEeccCccCCcEEEEecCcCCCCC--CCCcCEEEEEEEEeCCCceeec
Q 019908          220 KVLEVHVEKGMQHGQKIAFEGQADEAPD--TITGDIVFILQLKEHPKFKRKF  269 (334)
Q Consensus       220 ~~~~v~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~v~i~v~~~~~f~r~g  269 (334)
                      +.++|+||+|+++|+.++|+|+|++...  +..|||+|+|+|.-|..++.+.
T Consensus        27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~q   78 (81)
T PF01556_consen   27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQ   78 (81)
T ss_dssp             -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHH
T ss_pred             CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHH
Confidence            4688999999999999999999997533  3699999999999888776543

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=98.88  E-value=5.3e-09  Score=82.79  Aligned_cols=62  Identities=26%  Similarity=0.604  Sum_probs=50.0

Q ss_pred             eeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEe
Q 019908          144 RNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEK  219 (334)
Q Consensus       144 ~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~  219 (334)
                      ..+.|..|+|+|..     +|+.|+|+|.+....  ++  .++.+.+|+.|+|+|++     .|+.|+|++++..-
T Consensus        40 ~~v~C~~C~GsG~~-----~C~~C~G~G~v~~~~--~g--~~q~~~~C~~C~G~Gk~-----~C~~C~G~G~~~~~  101 (111)
T PLN03165         40 NTQPCFPCSGTGAQ-----VCRFCVGSGNVTVEL--GG--GEKEVSKCINCDGAGSL-----TCTTCQGSGIQPRY  101 (111)
T ss_pred             cCCCCCCCCCCCCc-----CCCCCcCcCeEEEEe--CC--cEEEEEECCCCCCccee-----eCCCCCCCEEEeee
Confidence            34689999999983     899999999887533  32  34567999999999974     49999999987653

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.86  E-value=2.8e-09  Score=90.48  Aligned_cols=49  Identities=31%  Similarity=0.409  Sum_probs=43.8

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           24 ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        24 a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .+..+|+++||+|+++||||+.+..         +.|+.||+||++|+||.+|+.|+.
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL   60 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML   60 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            4778999999999999999985421         679999999999999999999996

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.78  E-value=2.9e-09  Score=95.19  Aligned_cols=70  Identities=36%  Similarity=0.445  Sum_probs=62.2

Q ss_pred             CCCCCCccccccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCC------ChHHHHHHHHHHhhcCCCcccchhcccC
Q 019908            5 TPRRSNNTKYYEILGVSK---SATEDELKKAYRKAAMKNHPDKGG------DPEKFKELGQAYEVLSDPEKRDIYDQYG   74 (334)
Q Consensus         5 ~~~~~~~~~~y~iLgv~~---~a~~~eik~ayr~la~~~hPd~~~------~~~~f~~i~~Ay~~L~d~~~r~~YD~~G   74 (334)
                      +++.|...|+|.+|||+.   .|++.+|.+|.++...+||||+..      ..+-|+.|+.||++|+|+.+|..||..-
T Consensus        36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d  114 (379)
T COG5269          36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND  114 (379)
T ss_pred             hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence            456788899999999986   678899999999999999999972      2389999999999999999999999844

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.74  E-value=5.7e-09  Score=89.39  Aligned_cols=61  Identities=31%  Similarity=0.550  Sum_probs=55.5

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchh
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIY   70 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~Y   70 (334)
                      -+.|+|++|.|.|..+.++||+.||+|++..|||+|+|.     ..|.-+..||..|-|+..|..-
T Consensus        51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~  116 (250)
T KOG1150|consen   51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC  116 (250)
T ss_pred             cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            578999999999999999999999999999999999986     5799999999999998755543

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.73  E-value=7.5e-09  Score=96.78  Aligned_cols=55  Identities=18%  Similarity=0.221  Sum_probs=48.3

Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      .++|+||+++++|++++|+|+|++..++..|||+|+|+|..|+.++.++.+|+.+
T Consensus       228 ~~~v~ip~~~~~g~~~rl~g~G~p~~~~~~GDL~v~~~V~~P~~l~~~~~~~l~~  282 (291)
T PRK14299        228 PVEVTIPPRTQAGRKLRLKGKGWPRGPAGRGDQYAEVRITIPTRPTPEEERLYKQ  282 (291)
T ss_pred             CEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            3789999999999999999999986555689999999999999999888776544

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.70  E-value=2.4e-08  Score=77.05  Aligned_cols=62  Identities=31%  Similarity=0.514  Sum_probs=55.1

Q ss_pred             CCCCCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCC
Q 019908            3 GRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDP   64 (334)
Q Consensus         3 ~~~~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~   64 (334)
                      +.++..+..+..-.||||+++++.+.||+|+|++....|||+.++|-.-.+||||+++|...
T Consensus        47 GGF~~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPYlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   47 GGFEPKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPYLASKINEAKDLLEGT  108 (112)
T ss_pred             cccccccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHhcc
Confidence            34445667777888999999999999999999999999999999999999999999999754

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.58  E-value=1.7e-07  Score=87.90  Aligned_cols=43  Identities=19%  Similarity=0.299  Sum_probs=39.3

Q ss_pred             EEEEEeccC--ccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCC
Q 019908          221 VLEVHVEKG--MQHGQKIAFEGQADEAPDTITGDIVFILQLKEHP  263 (334)
Q Consensus       221 ~~~v~Ip~G--~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~  263 (334)
                      .+++.++||  +.+|++++++|+|++......|||||.++|+-++
T Consensus       280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYIKFEVKFPK  324 (337)
T ss_pred             eEEEecCCCceeChhHEEeecCCCcccccCCCCcEEEEEEEEcCC
Confidence            788999999  9999999999999997655599999999999776

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.51  E-value=8.2e-08  Score=90.43  Aligned_cols=53  Identities=25%  Similarity=0.389  Sum_probs=45.1

Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYV  274 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~  274 (334)
                      .++|+||+|+++|++++|+|+|++.++ ..|||||+|+|..|+.+.-+...|+.
T Consensus       236 ~v~v~ip~g~~~g~~~ri~g~G~p~~~-~~GdL~v~~~v~~P~~l~~~q~~l~~  288 (306)
T PRK10266        236 SILLTIPPGSQAGQRLRVKGKGLVSKK-QTGDLYAVLKIVMPPKPDEKTAALWQ  288 (306)
T ss_pred             cEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHH
Confidence            389999999999999999999998654 57999999999999887766555443

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1.1e-07  Score=98.32  Aligned_cols=58  Identities=34%  Similarity=0.523  Sum_probs=50.5

Q ss_pred             CCCCCCccccccccCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHhhcC
Q 019908            5 TPRRSNNTKYYEILGVSKSA----TEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLS   62 (334)
Q Consensus         5 ~~~~~~~~~~y~iLgv~~~a----~~~eik~ayr~la~~~hPd~~~~~-~~f~~i~~Ay~~L~   62 (334)
                      -|-++...+.|+||.|+-+-    +.+.||++|++||.+|||||||.. ++|.++|+|||.|+
T Consensus      1274 KP~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1274 KPATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMFERVNKAYELLS 1336 (2235)
T ss_pred             CCCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH
Confidence            35567788999999998543    347899999999999999999976 99999999999998

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=98.36  E-value=5.1e-07  Score=78.14  Aligned_cols=50  Identities=22%  Similarity=0.508  Sum_probs=41.3

Q ss_pred             EeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEe
Q 019908          189 HVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFE  239 (334)
Q Consensus       189 ~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~  239 (334)
                      .+|+.|+|+|+++....+|+.|+|.|.+..+..+.+++ .|+.+|++|++.
T Consensus       100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642       100 CKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            56777777777665557888888888899999999999 999999999875

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.34  E-value=3.6e-07  Score=80.17  Aligned_cols=53  Identities=32%  Similarity=0.674  Sum_probs=47.9

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---hHHHHHHHHHHh-hcCC
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD---PEKFKELGQAYE-VLSD   63 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~---~~~f~~i~~Ay~-~L~d   63 (334)
                      -+.||.+|||..+|+..|++.||..||+++|||...+   .+.|.+|.+||. ||+.
T Consensus        46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999998764   389999999998 7763

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=98.20  E-value=6.4e-07  Score=88.07  Aligned_cols=72  Identities=31%  Similarity=0.678  Sum_probs=44.5

Q ss_pred             eeCCCCCCCCCccCCcccCCCCCCCcEEEEEEe--------eccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeE
Q 019908          146 ILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQ--------IGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQ  217 (334)
Q Consensus       146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~--------~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~  217 (334)
                      ..|+.|+|+|........|+.|+|+|+.-....        .+.-++.+...+|+.|+|+|.+.- -..|+.|.|.|.+.
T Consensus         3 ~~C~~C~g~G~i~v~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v-~~~c~~c~G~gkv~   81 (715)
T COG1107           3 KKCPECGGKGKIVVGEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTV-YDTCPECGGTGKVL   81 (715)
T ss_pred             ccccccCCCceEeeeeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEE-EeecccCCCceeEE
Confidence            357788887777666667888888777622211        111233334457777777776553 46777777776655


Q ss_pred             E
Q 019908          218 E  218 (334)
Q Consensus       218 ~  218 (334)
                      .
T Consensus        82 ~   82 (715)
T COG1107          82 T   82 (715)
T ss_pred             e
Confidence            4

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=98.19  E-value=5.8e-07  Score=65.04  Aligned_cols=52  Identities=37%  Similarity=0.786  Sum_probs=34.0

Q ss_pred             ecCcccccccceeeeCCCCCCCCCccCC----------cccCCCCCCCcEEE-EEEeeccceeeEEEEeCCCCccce
Q 019908          133 YNGTTKKLSLSRNILCPKCKGKGSKSGA----------LGKCYGCQGTGMKI-TTRQIGLGMIQQMQHVCPECRGAG  198 (334)
Q Consensus       133 ~~G~~~~i~~~~~~~C~~C~G~G~~~~~----------~~~C~~C~G~G~~~-~~~~~~~g~~~~~~~~C~~C~G~G  198 (334)
                      +.|.... .-....+|+.|+|+|.+...          ..+|+.|+|+|+++ .             .+|+.|+|.|
T Consensus         4 C~G~G~~-~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~-------------~~C~~C~G~g   66 (66)
T PF00684_consen    4 CNGTGAK-PGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEK-------------DPCKTCKGSG   66 (66)
T ss_dssp             CTTTSB--STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TS-------------SB-SSSTTSS
T ss_pred             CCCcccC-CCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECC-------------CCCCCCCCcC
Confidence            4455443 22345689999999986431          25799999999987 4             8999999986

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=98.05  E-value=5.6e-06  Score=84.42  Aligned_cols=85  Identities=45%  Similarity=0.807  Sum_probs=70.7

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCCCC
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGAA   88 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~   88 (334)
                      +|||++|||+++|+.++||+|||+||++||||+++++   ++|++|++||++|+|+.+|+.||+||..+....    .++
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d~e----~gf   77 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDRE----DDF   77 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccccc----ccc
Confidence            6999999999999999999999999999999998754   689999999999999999999999998765421    111


Q ss_pred             CCcchhhccccC
Q 019908           89 HNPFDIFESFFG  100 (334)
Q Consensus        89 ~~~~d~f~~~Fg  100 (334)
                      ....++|.+||+
T Consensus        78 ~f~~DIF~sfFe   89 (871)
T TIGR03835        78 DFQADVFNSFFE   89 (871)
T ss_pred             chhHHHHHHHhh
Confidence            111366777665

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=97.47  E-value=0.00014  Score=66.93  Aligned_cols=61  Identities=31%  Similarity=0.780  Sum_probs=43.0

Q ss_pred             eeeCCCCCCCCCcc---CCc-----------------ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC
Q 019908          145 NILCPKCKGKGSKS---GAL-----------------GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER  204 (334)
Q Consensus       145 ~~~C~~C~G~G~~~---~~~-----------------~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~  204 (334)
                      .+.|+.|+|.|...   ++.                 ..|..|+|+|.                .+|+.|.|+|.     
T Consensus       198 ~~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~gt~~~C~~C~G~G~----------------~~C~tC~grG~-----  256 (406)
T KOG2813|consen  198 AMVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIGTHDLCYMCHGRGI----------------KECHTCKGRGK-----  256 (406)
T ss_pred             ceeccCcCCCCccccccCcceecccccCCCCCCCCccchhhhccCCCc----------------ccCCcccCCCC-----
Confidence            45688888888422   112                 34677777774                67888888885     


Q ss_pred             CCCCccCCCceeEEeEEEEEEe
Q 019908          205 DKCPQCKANKVTQEKKVLEVHV  226 (334)
Q Consensus       205 ~~C~~C~G~g~~~~~~~~~v~I  226 (334)
                      .+|.+|+|.|.......+.|.-
T Consensus       257 k~C~TC~gtgsll~~t~~vV~w  278 (406)
T KOG2813|consen  257 KPCTTCSGTGSLLNYTRIVVYW  278 (406)
T ss_pred             cccccccCccceeeeEEEEEEe
Confidence            7899999988887776666654

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]

Probab=97.40  E-value=0.00017  Score=71.46  Aligned_cols=56  Identities=32%  Similarity=0.700  Sum_probs=39.2

Q ss_pred             ecCcccccccceeeeCCCCCCCCCccCC-------------------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCC
Q 019908          133 YNGTTKKLSLSRNILCPKCKGKGSKSGA-------------------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPE  193 (334)
Q Consensus       133 ~~G~~~~i~~~~~~~C~~C~G~G~~~~~-------------------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~  193 (334)
                      |.|..+...  ....|+.|+|+|....-                   ..+|+.|+|+|.+..            ..+|+.
T Consensus         8 C~g~G~i~v--~~e~c~vc~gtG~~~~~d~k~~~~~~~~~~D~~~~~~~pc~~c~gkG~V~v------------~~~c~~   73 (715)
T COG1107           8 CGGKGKIVV--GEEECPVCHGTGFSDDFDPKGVANLSRETVDLFASFEIPCPKCRGKGTVTV------------YDTCPE   73 (715)
T ss_pred             cCCCceEee--eeeecccccccccccccChhhhhhhhhccccccccCCCCCCeeccceeEEE------------Eeeccc
Confidence            555444422  23469999999975311                   047999999998754            378999


Q ss_pred             CccceEEEc
Q 019908          194 CRGAGEVIS  202 (334)
Q Consensus       194 C~G~G~~~~  202 (334)
                      |.|+|++..
T Consensus        74 c~G~gkv~~   82 (715)
T COG1107          74 CGGTGKVLT   82 (715)
T ss_pred             CCCceeEEe
Confidence            999998754

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=97.40  E-value=0.00012  Score=58.17  Aligned_cols=49  Identities=31%  Similarity=0.682  Sum_probs=37.0

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC-----C--cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEc
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG-----A--LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVIS  202 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~-----~--~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~  202 (334)
                      ..+.|...       ..|+.|+|+|....     .  ..+|+.|+|+|+                ..|+.|.|+|.+..
T Consensus        45 ~~C~GsG~-------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk----------------~~C~~C~G~G~~~~  100 (111)
T PLN03165         45 FPCSGTGA-------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGS----------------LTCTTCQGSGIQPR  100 (111)
T ss_pred             CCCCCCCC-------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCcce----------------eeCCCCCCCEEEee
Confidence            44566555       27999999997532     1  257999999996                45999999998764

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=96.92  E-value=0.00043  Score=63.79  Aligned_cols=75  Identities=24%  Similarity=0.629  Sum_probs=48.2

Q ss_pred             eeecCccccccccee---eeCCCCCCCCCccCCcccCCCCCCCcEEEE--------EEeec---cceeeEEEEeCCCCcc
Q 019908          131 DLYNGTTKKLSLSRN---ILCPKCKGKGSKSGALGKCYGCQGTGMKIT--------TRQIG---LGMIQQMQHVCPECRG  196 (334)
Q Consensus       131 e~~~G~~~~i~~~~~---~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~--------~~~~~---~g~~~~~~~~C~~C~G  196 (334)
                      .++.|....+.++..   ..|..|.|.|.     ..|+.|+|.|....        ..-.|   ++.-  ....|..|+|
T Consensus       170 ~mf~~~~~~~~vphs~~v~~ch~c~gRG~-----~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k~g--t~~~C~~C~G  242 (406)
T KOG2813|consen  170 GMFSGVAHPAVVPHSMIVTFCHACLGRGA-----MVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPKIG--THDLCYMCHG  242 (406)
T ss_pred             CcccccccceeccchHhhhhhhcccCCCc-----eeccCcCCCCccccccCcceecccccCCCCCCCC--ccchhhhccC
Confidence            344554444444433   45999999994     47999999994211        00111   1111  2368889999


Q ss_pred             ceEEEccCCCCCccCCCceeE
Q 019908          197 AGEVISERDKCPQCKANKVTQ  217 (334)
Q Consensus       197 ~G~~~~~~~~C~~C~G~g~~~  217 (334)
                      +|+     .+|++|+|+|...
T Consensus       243 ~G~-----~~C~tC~grG~k~  258 (406)
T KOG2813|consen  243 RGI-----KECHTCKGRGKKP  258 (406)
T ss_pred             CCc-----ccCCcccCCCCcc
Confidence            986     7899999998765

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=96.87  E-value=0.00068  Score=56.35  Aligned_cols=65  Identities=32%  Similarity=0.575  Sum_probs=52.7

Q ss_pred             CCCccccccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908            8 RSNNTKYYEILGVSK--SATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~--~a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      +.+..+||.++|...  ..++.-++.-|.-..+++|||+...+         +.-.++|+||.+|.||-+|+.|=.
T Consensus         4 ~~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil   79 (168)
T KOG3192|consen    4 MGSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL   79 (168)
T ss_pred             cchHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            557789999997654  44556677789999999999985321         678999999999999999999864

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=96.74  E-value=0.001  Score=57.74  Aligned_cols=32  Identities=31%  Similarity=0.704  Sum_probs=22.4

Q ss_pred             eeeeCCCCCCCCCccCCcccCCCCCCCcEEEE
Q 019908          144 RNILCPKCKGKGSKSGALGKCYGCQGTGMKIT  175 (334)
Q Consensus       144 ~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~  175 (334)
                      +...|+.|+|+|.......+|+.|+|+|++..
T Consensus        98 ~~~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~  129 (186)
T TIGR02642        98 NSCKCPRCRGTGLIQRRQRECDTCAGTGRFRP  129 (186)
T ss_pred             cCCcCCCCCCeeEEecCCCCCCCCCCccEEee
Confidence            36678888888876554566777777777654

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.43  E-value=0.0016  Score=56.29  Aligned_cols=52  Identities=40%  Similarity=0.644  Sum_probs=44.5

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC---Ch--------HHHHHHHHHHhhc
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGG---DP--------EKFKELGQAYEVL   61 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~---~~--------~~f~~i~~Ay~~L   61 (334)
                      .+.+.|++|++...++..+|+++||++...+|||+-.   .+        +++++|++||+.+
T Consensus       111 ~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         111 DREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             cchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            3378999999999999999999999999999999743   22        6788899999753

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=95.84  E-value=0.015  Score=47.35  Aligned_cols=56  Identities=25%  Similarity=0.310  Sum_probs=42.5

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCC
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDP   64 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~   64 (334)
                      +.......||+|++.++.++|.+.|.+|-...+|++.++.-.=.+|..|.|.|..+
T Consensus        55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSfYLQSKV~rAKErl~~E  110 (127)
T PF03656_consen   55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGSFYLQSKVFRAKERLEQE  110 (127)
T ss_dssp             --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-HHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHH
Confidence            45557789999999999999999999999999999999987778888999988643

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=94.83  E-value=0.0095  Score=51.48  Aligned_cols=60  Identities=30%  Similarity=0.482  Sum_probs=48.6

Q ss_pred             ccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           13 KYYEILGVSKSATE--DELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        13 ~~y~iLgv~~~a~~--~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      +++..++..+.+..  +.++..|+.+++++|||+....         +.+..++.||.+|.||-+|+.|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            45566666666643  5699999999999999997643         578999999999999999998864

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=94.20  E-value=0.051  Score=53.95  Aligned_cols=44  Identities=34%  Similarity=0.533  Sum_probs=33.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----------HHHHHHHHHHhhcC
Q 019908           19 GVSKSATEDELKKAYRKAAMKNHPDKGGDP-----------EKFKELGQAYEVLS   62 (334)
Q Consensus        19 gv~~~a~~~eik~ayr~la~~~hPd~~~~~-----------~~f~~i~~Ay~~L~   62 (334)
                      .+..=.+.++||+||||..+..||||-+..           +.|..+++||....
T Consensus       395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~  449 (453)
T KOG0431|consen  395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN  449 (453)
T ss_pred             chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence            344455889999999999999999996532           56777777776543

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=92.42  E-value=0.13  Score=43.19  Aligned_cols=25  Identities=24%  Similarity=0.578  Sum_probs=15.7

Q ss_pred             eeCCCCCCCCCccCCcccCCCCCCCcEEEE
Q 019908          146 ILCPKCKGKGSKSGALGKCYGCQGTGMKIT  175 (334)
Q Consensus       146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~  175 (334)
                      ..|..|.|.+..     +|..|+|+=+++.
T Consensus       100 ~~C~~Cgg~rfv-----~C~~C~Gs~k~~~  124 (147)
T cd03031         100 GVCEGCGGARFV-----PCSECNGSCKVFA  124 (147)
T ss_pred             CCCCCCCCcCeE-----ECCCCCCcceEEe
Confidence            347777776654     5666766666543

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>PF13446 RPT: A repeated domain in UCH-protein

Probab=91.49  E-value=0.21  Score=35.22  Aligned_cols=47  Identities=26%  Similarity=0.500  Sum_probs=36.2

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCC
Q 019908           10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSD   63 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d   63 (334)
                      +-.+.|+.|||+++++.+.|-.+|+....       .+|.....+.+|..++.+
T Consensus         3 ~~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-------~~P~~~~~~r~AL~~Ia~   49 (62)
T PF13446_consen    3 DVEEAYEILGIDEDTDDDFIISAFQSKVN-------DDPSQKDTLREALRVIAE   49 (62)
T ss_pred             CHHHHHHHhCcCCCCCHHHHHHHHHHHHH-------cChHhHHHHHHHHHHHHH
Confidence            44678999999999999999999999886       233455556677776653

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=91.49  E-value=0.17  Score=46.23  Aligned_cols=51  Identities=27%  Similarity=0.616  Sum_probs=32.3

Q ss_pred             eeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccC
Q 019908          146 ILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCK  211 (334)
Q Consensus       146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~  211 (334)
                      -.|..|.|-+..     +|..|+|+=++...-.-. +.    -.+|+.|+=.|-     -+|+.|.
T Consensus       230 ~~C~~CGg~rFl-----pC~~C~GS~kv~~~~~~~-~~----~~rC~~CNENGL-----vrCp~Cs  280 (281)
T KOG2824|consen  230 GVCESCGGARFL-----PCSNCHGSCKVHEEEEDD-GG----VLRCLECNENGL-----VRCPVCS  280 (281)
T ss_pred             CcCCCcCCcceE-----ecCCCCCceeeeeeccCC-Cc----EEECcccCCCCc-----eeCCccC
Confidence            457888777664     688888887766521011 11    167888887775     3577775

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=90.10  E-value=0.57  Score=41.17  Aligned_cols=38  Identities=21%  Similarity=0.359  Sum_probs=32.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcC
Q 019908           21 SKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLS   62 (334)
Q Consensus        21 ~~~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~   62 (334)
                      +++||.+||.+|+.++..+|    ..|++.-.+|-.||+.+.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y----~gd~~~~~~IEaAYD~IL   38 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQY----AGDEKSREAIEAAYDAIL   38 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHHH
Confidence            57999999999999999998    445677888999999654

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=88.50  E-value=0.18  Score=47.15  Aligned_cols=59  Identities=29%  Similarity=0.575  Sum_probs=42.6

Q ss_pred             eeeeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          129 LEDLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       129 l~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      ..+.+.|...+ .......|..|.|+|....      ...+|+.|+|.|.+..             ..|..|.|.|.+.
T Consensus       166 ~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~-------------~~c~~~~g~~~v~  230 (288)
T KOG0715|consen  166 DCETCFGSGAE-EGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLR-------------DNCQACSGAGQVR  230 (288)
T ss_pred             ccccccCcCcc-cccccccchhhhCcccccccccCCcceeecccccccceecc-------------chHHHhhcchhhh
Confidence            44566666644 5556788999999993322      1136999999998765             4599999999654

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=88.24  E-value=0.49  Score=43.36  Aligned_cols=40  Identities=28%  Similarity=0.725  Sum_probs=32.1

Q ss_pred             ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEc------cCCCCCccCCCceeE
Q 019908          162 GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVIS------ERDKCPQCKANKVTQ  217 (334)
Q Consensus       162 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~g~~~  217 (334)
                      ..|..|+|.++                .+|..|+|+-++..      .-.+|..|+-.|.+.
T Consensus       230 ~~C~~CGg~rF----------------lpC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLvr  275 (281)
T KOG2824|consen  230 GVCESCGGARF----------------LPCSNCHGSCKVHEEEEDDGGVLRCLECNENGLVR  275 (281)
T ss_pred             CcCCCcCCcce----------------EecCCCCCceeeeeeccCCCcEEECcccCCCCcee
Confidence            46999999986                68999999988775      234899999888764

>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1

Probab=86.46  E-value=4.6  Score=34.37  Aligned_cols=20  Identities=25%  Similarity=0.375  Sum_probs=15.6

Q ss_pred             EEEEEeccCccCCcEEEEec
Q 019908          221 VLEVHVEKGMQHGQKIAFEG  240 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g  240 (334)
                      .+.+.||||...|..-.++|
T Consensus        81 El~~ei~pg~~~g~itTVEG  100 (160)
T smart00709       81 ELDLEIPPGPLGGFITTVEG  100 (160)
T ss_pred             eeeEEecCCCCCcEEEehHH
Confidence            67788888887887777765

Also present in archaeal proteins.

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=83.51  E-value=1.3  Score=37.20  Aligned_cols=39  Identities=38%  Similarity=0.980  Sum_probs=32.2

Q ss_pred             ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccC-------CCCCccCCCcee
Q 019908          162 GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISER-------DKCPQCKANKVT  216 (334)
Q Consensus       162 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~-------~~C~~C~G~g~~  216 (334)
                      ..|..|+|.+.                .+|..|+|+-++....       .+|+.|+-.|.+
T Consensus       100 ~~C~~Cgg~rf----------------v~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~  145 (147)
T cd03031         100 GVCEGCGGARF----------------VPCSECNGSCKVFAENATAAGGFLRCPECNENGLV  145 (147)
T ss_pred             CCCCCCCCcCe----------------EECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence            46999999997                6899999998887654       489999987765

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>TIGR00310 ZPR1_znf ZPR1 zinc finger domain

Probab=81.38  E-value=8.2  Score=33.87  Aligned_cols=20  Identities=30%  Similarity=0.461  Sum_probs=15.8

Q ss_pred             EEEEEeccC-ccCCcEEEEec
Q 019908          221 VLEVHVEKG-MQHGQKIAFEG  240 (334)
Q Consensus       221 ~~~v~Ip~G-~~~G~~i~l~g  240 (334)
                      .+.+.|||| +..|..-.+.|
T Consensus        80 El~lei~pg~~~~G~iTTVEG  100 (192)
T TIGR00310        80 ELGLDIEPGPTSGGFITNLEG  100 (192)
T ss_pred             ceEEEECCCccCCceEEeeHh
Confidence            677888888 68888888865

>PRK14714 DNA polymerase II large subunit; Provisional

Probab=81.28  E-value=1.6  Score=48.07  Aligned_cols=65  Identities=22%  Similarity=0.611  Sum_probs=40.1

Q ss_pred             CcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEcc---CCCCCccC
Q 019908          135 GTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISE---RDKCPQCK  211 (334)
Q Consensus       135 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~---~~~C~~C~  211 (334)
                      +...++.+. ...|+.|......    ..|+.|+..=..              ...|+.|+..=  ...   ...|+.|.
T Consensus       658 ~G~ieVEV~-~rkCPkCG~~t~~----~fCP~CGs~te~--------------vy~CPsCGaev--~~des~a~~CP~CG  716 (1337)
T PRK14714        658 GGVIEVEVG-RRRCPSCGTETYE----NRCPDCGTHTEP--------------VYVCPDCGAEV--PPDESGRVECPRCD  716 (1337)
T ss_pred             CCeEEEEEE-EEECCCCCCcccc----ccCcccCCcCCC--------------ceeCccCCCcc--CCCccccccCCCCC
Confidence            334344443 4679999876432    389999876321              14799998741  110   24899999


Q ss_pred             CCceeEEeE
Q 019908          212 ANKVTQEKK  220 (334)
Q Consensus       212 G~g~~~~~~  220 (334)
                      ..-+.....
T Consensus       717 tplv~~~~~  725 (1337)
T PRK14714        717 VELTPYQRR  725 (1337)
T ss_pred             CcccccceE
Confidence            875555444

>PRK04023 DNA polymerase II large subunit; Validated

Probab=81.09  E-value=1.6  Score=46.93  Aligned_cols=69  Identities=20%  Similarity=0.446  Sum_probs=42.5

Q ss_pred             eeeeec-CcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCC
Q 019908          129 LEDLYN-GTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKC  207 (334)
Q Consensus       129 l~e~~~-G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C  207 (334)
                      +.+++. +...++.+. ...|+.|.-.+    ....|+.|+..=..              ...|+.|.-...    ...|
T Consensus       610 i~~A~~~~g~~eVEVg-~RfCpsCG~~t----~~frCP~CG~~Te~--------------i~fCP~CG~~~~----~y~C  666 (1121)
T PRK04023        610 INKAAKYKGTIEVEIG-RRKCPSCGKET----FYRRCPFCGTHTEP--------------VYRCPRCGIEVE----EDEC  666 (1121)
T ss_pred             HHHHHhcCCceeeccc-CccCCCCCCcC----CcccCCCCCCCCCc--------------ceeCccccCcCC----CCcC
Confidence            335555 444444444 34699998664    33579999976211              257999954432    3679


Q ss_pred             CccCCCceeEEeE
Q 019908          208 PQCKANKVTQEKK  220 (334)
Q Consensus       208 ~~C~G~g~~~~~~  220 (334)
                      +.|...-......
T Consensus       667 PKCG~El~~~s~~  679 (1121)
T PRK04023        667 EKCGREPTPYSKR  679 (1121)
T ss_pred             CCCCCCCCccceE
Confidence            9999765444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	334
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		3e-44
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		4e-19
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		1e-16
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-16
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		1e-15
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		1e-15
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		1e-15
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		1e-15
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		1e-15
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		2e-15
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		2e-14
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		1e-13
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		2e-13
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		3e-13
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		5e-13
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		5e-13
2qld_A	183	Human Hsp40 Hdj1 Length = 183		6e-13
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		2e-12
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		6e-12
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		2e-11
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		5e-11
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		8e-11
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		3e-09
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		3e-09
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		2e-08
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		4e-08
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-07
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-07
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		8e-05
1xao_A	121	Hsp40-Ydj1 Dimerization Domain Length = 121		9e-05
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		4e-04
2ys8_A	90	Solution Structure Of The Dnaj-Like Domain From Hum		5e-04
2pf4_E	174	Crystal Structure Of The Full-Length Simian Virus 4		5e-04
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		7e-04

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 86/198 (43%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 116 KQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPXXXXXXXXXXXXXXXYGCQGTGMKIT 175
           ++G+D+ H +  SLE+LY G T KL+L++ ILC                  C G G+K  
Sbjct: 9   QRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFV 68
Query: 176 TRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQK 235
           TRQ+G  MIQ+ Q  C  C G G++I  +D+C  C   KV  E+K+LEVHVE GM+ GQ+
Sbjct: 69  TRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQR 127
Query: 236 IAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLD 295
           I F+G+AD+APD I GD+VFI+  + H  FKR  DDL  +  + L  A+ G +FAL H+ 
Sbjct: 128 IVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVS 187
Query: 296 GRQLLIKSNPGEIIKPGI 313
           G  L +   PGE+I PG+
Sbjct: 188 GDWLKVGIVPGEVIAPGM 205

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 1/69 (1%)
Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDPEKFKELGQAYEVLSDPEKRDIY 70
          TK Y++LGVS SA E ELKK YRKAA+K HPDK  GD EKFKE+ +A+E+L+DP+KR+IY
Sbjct: 8  TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIY 67
Query: 71 DQYGEDALK 79
          DQYG +A +
Sbjct: 68 DQYGLEAAR 76

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 57/69 (82%), Gaps = 3/69 (4%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
          YY+ LG+++ A+++E+K+AYR+ A++ HPDK  +P   EKFKE+ +AY+VLSDP KR+I+
Sbjct: 5  YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIF 64
Query: 71 DQYGEDALK 79
          D+YGE+ LK
Sbjct: 65 DRYGEEGLK 73

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 4/72 (5%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDI 69
          YYEILGVSK+A E E++KAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 70 YDQYGEDALKEG 81
          YDQYG  A ++G
Sbjct: 65 YDQYGHAAFEQG 76

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDI 69
          YYEILGVSK+A E E++KAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 70 YDQYGEDALKE 80
          YDQYG  A ++
Sbjct: 65 YDQYGHAAFEQ 75

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE---KFKELGQAYEVLSDPEKRDI 69
          YYEILGVSK+A E E++KAY++ AMK HPD+  GD E   KFKE+ +AYEVL+D +KR  
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 70 YDQYGEDALKE 80
          YDQYG  A ++
Sbjct: 65 YDQYGHAAFEQ 75

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 9/80 (11%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-----PEKFKELGQAYEVLSDPEKRD 68
          YYEIL V +SA+ D++KKAYR+ A++ HPDK  D      +KFKE+ +AYEVLSD  KR+
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 69 IYDQYGEDALKEGMGGAGAA 88
          IYD+YG    +EG+ G G  
Sbjct: 64 IYDRYG----REGLTGTGTG 79

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-PEKFKELGQAYEVLSDPEKRDIY 70
          T YY++LGV   A+++ELKKAYRK A+K HPDK  D  E+FK++ QAYEVLSD +KR IY
Sbjct: 8  TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIY 67
Query: 71 DQYGED 76
          DQ GE+
Sbjct: 68 DQGGEE 73

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/64 (60%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
          YYEILGVS+ A++++LKKAYR+ A+K HPDK   P   E FK +G AY VLS+PEKR  Y
Sbjct: 9  YYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQY 68
Query: 71 DQYG 74
          DQ+G
Sbjct: 69 DQFG 72

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEKFKELGQAYEVLSDPEKRDIY 70
          T YY++LGV  +AT++ELKKAYRK A+K HPDK   + EKFK++ QAYEVLSD +KR++Y
Sbjct: 6  TTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELY 65
Query: 71 DQYGE 75
          D+ GE
Sbjct: 66 DKGGE 70

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE---KFKELGQAYEVLSDPEKRDIY 70
          YY+ILGV KSA+E ++KKA+ K AMK HPDK   P+   KF+E+ +AYE LSD  +R  Y
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 71 DQYGEDALKEGMGGAG 86
          D  G  A   G G +G
Sbjct: 69 DTLGHSAFTSGKGQSG 84

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/73 (52%), Positives = 51/73 (69%), Gaps = 9/73 (12%)
Query: 9  SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE-------KFKELGQAYEVL 61
          S    YYE+L V + A+ + +KKAYRK A+K HPDK  +PE       +FK++ +AYEVL
Sbjct: 6  SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDK--NPENKEEAERRFKQVAEAYEVL 63
Query: 62 SDPEKRDIYDQYG 74
          SD +KRDIYD+YG
Sbjct: 64 SDAKKRDIYDRYG 76

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 5/76 (6%)
Query: 9  SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-----PEKFKELGQAYEVLSD 63
          S    YYE+LGV  SA+ +++KKAYRK A++ HPDK  D      +KFK + +AYEVLSD
Sbjct: 6  SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65
Query: 64 PEKRDIYDQYGEDALK 79
           +KR +YD+ G D+ +
Sbjct: 66 SKKRSLYDRAGCDSWR 81

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
Query: 15 YEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-PE---KFKELGQAYEVLSDPEKRDIY 70
          Y +LG+ K+AT D++KK+YRK A+K HPDK  D PE   KFKE+  A+ +L+D  KR+IY
Sbjct: 20 YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIY 79
Query: 71 DQYGEDAL 78
          D+YG   L
Sbjct: 80 DKYGSLGL 87

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 215 VTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYV 274
           +  E K+L + V+KG + G KI F  + D+  + I  DIVF+L+ K H  FKR   D+  
Sbjct: 47  IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIY 106
Query: 275 DHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGI 313
              +SL EALCG    +  LDGR + +     ++I+PG+
Sbjct: 107 PARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGM 143

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 215 VTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYV 274
           +  E K+L + V+KG + G KI F  + D+  + I  DIVF+L+ K H  FKR   D+  
Sbjct: 38  IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIY 97
Query: 275 DHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGI 313
              +SL EALCG    +  LDGR + +     ++I+PG+
Sbjct: 98  PARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGM 134

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 215 VTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYV 274
           +  E K+L + V+KG + G KI F  + D+  + I  DIVF+L+ K H  FKR   D+  
Sbjct: 40  IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIY 99
Query: 275 DHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGI 313
              +SL EALCG    +  LDGR + +     ++I+PG+
Sbjct: 100 PARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGM 136

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 213 NKVTQEKKVLEVHVEKGMQHGQKIAFEGQAD-EAPDTITGDIVFILQLKEHPKFKRKFDD 271
           +KV  E+ ++EV ++ G + G K+ + G+ D E+P T  GD+V I+Q K HP+F R    
Sbjct: 35  HKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCH 94
Query: 272 LYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKP 311
           L    T+ L  AL GF   +T LD R L I     EI+ P
Sbjct: 95  LIXKVTIPLVRALTGFTCPVTTLDNRNLQIPIK--EIVNP 132

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/63 (49%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
Query: 15 YEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYD 71
          Y +LGVS++A++ ++KKAY+K A + HPDK  DP   ++F ++ +AYE+LS+ EKR  YD
Sbjct: 20 YRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYD 79
Query: 72 QYG 74
           YG
Sbjct: 80 HYG 82

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEK---FKELGQAYEVLSDPE 65
          ++  +Y +LGVSK+A+  E+++A++K A+K HPDK   +P     F ++ +AYEVL D +
Sbjct: 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDED 78
Query: 66 KRDIYDQYGEDALKEGMGG 84
           R  YD+YGE  L++  GG
Sbjct: 79 LRKKYDKYGEKGLEDNQGG 97

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPEK---FKELGQAYEVLSDPEKRDI 69
          +Y +LGVSK+A+  E+++A++K A+K HPDK   +P     F ++ +AYEVL D + R  
Sbjct: 4  FYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 63
Query: 70 YDQYGEDALKEGMGG 84
          YD+YGE  L++  GG
Sbjct: 64 YDKYGEKGLEDNQGG 78

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDI 69
          YY+ILGV ++A++ E+KKAY + A K HPD   D     EKF +L +AYEVLSD  KR  
Sbjct: 9  YYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68
Query: 70 YDQYG 74
          YD YG
Sbjct: 69 YDAYG 73

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 218 EKKVLEVHVEKGMQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVDH 276
           EK  +++ ++ G + G KI ++ Q D  P T     + F++Q K HP FKR  DDL    
Sbjct: 34  EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTL 93
Query: 277 TLSLTEALCGFQFALTHLDGRQL 299
            LS  E+L GF   +  +DGR L
Sbjct: 94  PLSFKESLLGFSKTIQTIDGRTL 116

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 218 EKKVLEVHVEKGMQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVDH 276
           EK  +++ ++ G + G KI ++ Q D  P T     + F++Q K HP FKR  DDL    
Sbjct: 34  EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTL 93
Query: 277 TLSLTEALCGFQFALTHLDGRQL 299
            LS  E+L GF   +  +DGR L
Sbjct: 94  PLSFKESLLGFSKTIQTIDGRTL 116

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE---KFKELGQAYEVLSDPEKRDIY 70
          YY I+GV  +     +K AYR+ A K HPD   +P+   +FKE+ +A+EVLSD ++R  Y
Sbjct: 7  YYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEY 66
Query: 71 DQ 72
          DQ
Sbjct: 67 DQ 68

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPD--KGGDPE-KFKELGQAYEVLSDPEKRDIY 70
           YY ILGV  +     +K AYR+ A K HPD  K  D E KFK+L +A+EVL D ++R  Y
Sbjct: 30  YYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEY 89
Query: 71  DQYGEDALKEGMGGAGAAH 89
           DQ  +     G G     H
Sbjct: 90  DQLWQHRNDPGFGRQRQTH 108

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 4   RTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-------PEKFKELGQ 56
           R  ++S    YY+ILGV ++A + E+ KAYRK A++ HPD   +        +KF ++  
Sbjct: 374 RLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAA 433
Query: 57  AYEVLSDPEKRDIYD 71
           A EVLSDPE R  +D
Sbjct: 434 AKEVLSDPEMRKKFD 448

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 4   RTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-------PEKFKELGQ 56
           R  ++S    YY+ILGV ++A + E+ KAYRK A++ HPD   +        +KF ++  
Sbjct: 374 RLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAA 433
Query: 57  AYEVLSDPEKRDIYD 71
           A EVLSDPE R  +D
Sbjct: 434 AKEVLSDPEXRKKFD 448

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPE 65
          + T  Y++LGV  +AT+ ++K AY +     HPD+        E+F  + QAY VL    
Sbjct: 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSAT 74
Query: 66 KRDIYDQ 72
           R  YD+
Sbjct: 75 LRRKYDR 81

>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain Length = 121

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 FKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGI 313
           FKR  DDL  +  + L  A+ G +FAL H+ G  L +   PGE+I PG+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGM 50

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----------EKFKELGQAYEVLSD 63
          +Y ILG   SA   +LK+ Y+K  +  HPDK              +KF E+ QA+++L +
Sbjct: 12 WYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGN 71
Query: 64 PEKRDIYD-QYGEDALK 79
           E +  YD Q  ED L+
Sbjct: 72 EETKREYDLQRCEDDLR 88

>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras- Associated Protein Rap1 Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 7  RRSNNTK-YYEILGVSKSATEDELKKAYRKAAMKNHPDK---GGDPEKFKELGQAYEVL 61
          RR  N+K  +++LGV   A+ DE+ KAYRK A+  HPDK    G  + FK +  A   L
Sbjct: 21 RRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTAL 79

>pdb|2PF4|E Chain E, Crystal Structure Of The Full-Length Simian Virus 40 Small T Antigen Complexed With The Protein Phosphatase 2a Aalpha Subunit Length = 174

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 8  RSNNTKYYEILGVSKSATED--ELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSD 63
          R  + +  ++LG+ +SA  +   ++KAY K   + HPDKGGD EK K++   Y+ + D
Sbjct: 7  REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMED 64

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 15 YEILGVSKSATEDE-LKKAYRKAAMKNHPDKGGDPE-------KFKELGQAYEVLSDPEK 66
          Y++L V++   + + L KAYR  A K+HPD+  + E       +F+ +  AYE L D E 
Sbjct: 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 67 RDIYDQY 73
          +  YD Y
Sbjct: 78 KTNYDYY 84

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	334
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	1e-105
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	6e-60
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	2e-53
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	4e-07
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	3e-49
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	4e-44
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	2e-42
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	2e-41
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	2e-39
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	3e-38
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	4e-38
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	8e-38
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	1e-37
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	2e-37
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-36
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	6e-36
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	6e-36
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	9e-36
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	7e-35
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	8e-35
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	2e-34
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	2e-34
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-34
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	2e-32
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	4e-31
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	3e-30
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	1e-27
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	1e-27
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	2e-25
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-23
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	2e-21
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	4e-21
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	3e-18
2guz_A	71	Mitochondrial import inner membrane translocase su	3e-17
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	2e-16
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	8e-16
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	9e-16
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	4e-15
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	1e-12
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-10
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	3e-10
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	4e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  307 bits (790), Expect = e-105
 Identities = 97/208 (46%), Positives = 136/208 (65%), Gaps = 1/208 (0%)

Query: 108 GSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGC 167
           G+ R R  ++G+D+ H +  SLE+LY G T KL+L++ ILC +C+G+G K GA+ KC  C
Sbjct: 1   GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSC 60

Query: 168 QGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVE 227
            G G+K  TRQ+G  MIQ+ Q  C  C G G++I  +D+C  C   KV  E+K+LEVHVE
Sbjct: 61  NGQGIKFVTRQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVE 119

Query: 228 KGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGF 287
            GM+ GQ+I F+G+AD+APD I GD+VFI+  + H  FKR  DDL  +  + L  A+ G 
Sbjct: 120 PGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGG 179

Query: 288 QFALTHLDGRQLLIKSNPGEIIKPGIYF 315
           +FAL H+ G  L +   PGE+I PG+  
Sbjct: 180 EFALEHVSGDWLKVGIVPGEVIAPGMRK 207

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  194 bits (495), Expect = 6e-60
 Identities = 66/295 (22%), Positives = 100/295 (33%), Gaps = 76/295 (25%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           YY ILGV  +     +K AYR+ A K HPD   +     KFK+L +A+EVL D ++R  Y
Sbjct: 30  YYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEY 89

Query: 71  DQYGEDALKEGMGGAGAAHNPF-------DIFESFFGGGTFGAGGSSRGRRRKQGEDVVH 123
           DQ  +     G G     H          DIF S FG          R +   +G D+  
Sbjct: 90  DQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQ----AHQRRRQHAARGHDLEI 145

Query: 124 TLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGM 183
            + V LE+     T+ +S +                     Y   G     T + +    
Sbjct: 146 EVAVFLEETLAEQTRTISYNLP------------------VYNVFGMIESETPKTL---- 183

Query: 184 IQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQAD 243
                                                   V +  G+  GQ+I  +GQ  
Sbjct: 184 ---------------------------------------NVKIPAGVVDGQRIRLKGQGT 204

Query: 244 EAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
              +    GD+  ++ +  HP F     +L +   L+  EA  G +  +  L   
Sbjct: 205 PGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES 259

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  172 bits (439), Expect = 2e-53
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 3/131 (2%)

Query: 183 MIQQMQHVCPE-CRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQ 241
           +   ++    E   G  + +    K        +  E K+L + V+KG + G KI F  +
Sbjct: 5   VTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKE 64

Query: 242 ADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLI 301
            D+  + I  DIVF+L+ K H  FKR   D+     +SL EALCG    +  LDGR + +
Sbjct: 65  GDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPV 124

Query: 302 KSNPGEIIKPG 312
                ++I+PG
Sbjct: 125 V--FKDVIRPG 133

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score = 48.4 bits (116), Expect = 4e-07
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 121 VVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKG 155
           V H L+VSLE++Y+G TKK+ +S         GK 
Sbjct: 5   VTHDLRVSLEEIYSGCTKKMKISHK--RLNPDGKS 37

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  161 bits (410), Expect = 3e-49
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 198 GEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQAD-EAPDTITGDIVFI 256
           G+    +    +   +KV  E+ ++EV ++ G + G K+ + G+ D E+P T  GD+V I
Sbjct: 20  GKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLI 79

Query: 257 LQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPG 312
           +Q K HP+F R    L +  T+ L  AL GF   +T LD R L I     EI+ P 
Sbjct: 80  IQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIP--IKEIVNPK 133

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  148 bits (376), Expect = 4e-44
 Identities = 45/195 (23%), Positives = 66/195 (33%), Gaps = 69/195 (35%)

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQ 178
           E V   L VSLEDL+                                G + +  KI    
Sbjct: 1   ETVQVNLPVSLEDLFV-------------------------------GKKKS-FKIG--- 25

Query: 179 IGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAF 238
                                           K      EK  +++ ++ G + G KI +
Sbjct: 26  -------------------------------RKGPHGASEKTQIDIQLKPGWKAGTKITY 54

Query: 239 EGQADEAPDT-ITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGR 297
           + Q D  P T     + F++Q K HP FKR  DDL     LS  E+L GF   +  +DGR
Sbjct: 55  KNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGR 114

Query: 298 QLLIKSNPGEIIKPG 312
            L +     + ++P 
Sbjct: 115 TLPLSRV--QPVQPS 127

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  140 bits (356), Expect = 2e-42
 Identities = 53/100 (53%), Positives = 65/100 (65%), Gaps = 14/100 (14%)

Query: 10  NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDPEKFKELGQAYEVLSDPEKRD 68
             TK Y++LGVS SA E ELKK YRKAA+K HPDK  GD EKFKE+ +A+E+L+DP+KR+
Sbjct: 6   KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKRE 65

Query: 69  IYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGG 108
           IYDQYG +A + G    G              GG  GAGG
Sbjct: 66  IYDQYGLEAARSGGPSFG-------------PGGPGGAGG 92

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  142 bits (360), Expect = 2e-41
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 4/118 (3%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDP---EKFKELGQAYEVLSDPEKRDI 69
           +Y +LGVSK+A+  E+++A++K A+K HPDK   +P     F ++ +AYEVL D + R  
Sbjct: 4   FYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKK 63

Query: 70  YDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKV 127
           YD+YGE  L++  GG   + + +      +           R          +  +  
Sbjct: 64  YDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNF 121

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  133 bits (337), Expect = 2e-39
 Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 5/91 (5%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDPE----KFKELGQAYEVLSDPEKRD 68
          YYEIL V +SA+ D++KKAYR+ A++ HPDK   + E    KFKE+ +AYEVLSD  KR+
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63

Query: 69 IYDQYGEDALKEGMGGAGAAHNPFDIFESFF 99
          IYD+YG + L     G   A           
Sbjct: 64 IYDRYGREGLTGTGTGPSRAEAGSGGPGLEH 94

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  129 bits (327), Expect = 3e-38
 Identities = 41/66 (62%), Positives = 52/66 (78%), Gaps = 1/66 (1%)

Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-PEKFKELGQAYEVLSDPEKRDIY 70
          T YY++LGV   A+++ELKKAYRK A+K HPDK  D  E+FK++ QAYEVLSD +KR IY
Sbjct: 8  TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIY 67

Query: 71 DQYGED 76
          DQ GE+
Sbjct: 68 DQGGEE 73

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  130 bits (328), Expect = 4e-38
 Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 5/81 (6%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP----EKFKELGQAYEVLSDPEKRD 68
          YYE+LGV  SA+ +++KKAYRK A++ HPDK   +     +KFK + +AYEVLSD +KR 
Sbjct: 11 YYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRS 70

Query: 69 IYDQYGEDALKEGMGGAGAAH 89
          +YD+ G D+ + G G +G + 
Sbjct: 71 LYDRAGCDSWRAGGGASGPSS 91

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  129 bits (327), Expect = 8e-38
 Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 10/97 (10%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
            Y +LG+ K+AT D++KK+YRK A+K HPDK   +P   +KFKE+  A+ +L+D  KR+I
Sbjct: 19  LYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNI 78

Query: 70  YDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGA 106
           YD+YG   L              +   ++F  G    
Sbjct: 79  YDKYGSLGLYVAEQFGE------ENVNTYFVSGPSSG 109

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  129 bits (326), Expect = 1e-37
 Identities = 49/99 (49%), Positives = 62/99 (62%), Gaps = 11/99 (11%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
           YYEILGVSK+A E E++KAY++ AMK HPD+  GD     KFKE+ +AYEVL+D +KR  
Sbjct: 5   YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 70  YDQYGEDALKEGMGGAGAAHNPF-------DIFESFFGG 101
           YDQYG  A ++G  G G             D+F   FGG
Sbjct: 65  YDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGG 103

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  127 bits (322), Expect = 2e-37
 Identities = 37/71 (52%), Positives = 57/71 (80%), Gaps = 3/71 (4%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
          YY+ LG+++ A+++E+K+AYR+ A++ HPDK  +P   EKFKE+ +AY+VLSDP KR+I+
Sbjct: 5  YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIF 64

Query: 71 DQYGEDALKEG 81
          D+YGE+ LK  
Sbjct: 65 DRYGEEGLKGS 75

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  127 bits (320), Expect = 1e-36
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 8   RSNNTKYYEILGVSKSATED--ELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPE 65
           R  + +  ++LG+ +SA  +   ++KAY K   + HPDKGGD EK K++   Y+ + D  
Sbjct: 4   REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV 63

Query: 66  KRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGG 101
           K      +G       +   G      D +E ++  
Sbjct: 64  KYAHQPDFGGFWDATEIPTYGT-----DEWEQWWNA 94

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  127 bits (320), Expect = 6e-36
 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 4  RTPRRSNNTKYYEILGVSKSATED--ELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVL 61
          +   R  + +  ++LG+ +SA  +   ++KAY K   + HPDKGGD EK K++   Y+ +
Sbjct: 3  KVLNREESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKM 62

Query: 62 SDPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIF 95
           D  K      +G       +  +        I+
Sbjct: 63 EDGVKYAHQPDFGGFWDATEVFASSLNPGVDAIY 96

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  124 bits (313), Expect = 6e-36
 Identities = 39/76 (51%), Positives = 49/76 (64%), Gaps = 3/76 (3%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
          YY+ILGV KSA+E ++KKA+ K AMK HPDK   P    KF+E+ +AYE LSD  +R  Y
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68

Query: 71 DQYGEDALKEGMGGAG 86
          D  G  A   G G +G
Sbjct: 69 DTLGHSAFTSGKGQSG 84

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  124 bits (314), Expect = 9e-36
 Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 7   RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLS 62
           R  +   YY +LG  + ++ +++   ++  A++ HPDK   +P   E F++L +A E+L+
Sbjct: 15  RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILT 74

Query: 63  DPEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFG 100
           + E R  YD +    +        A ++         G
Sbjct: 75  NEESRARYDHWRRSQMSMPFQQWEALNDSVKTSGPSSG 112

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  121 bits (305), Expect = 7e-35
 Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 5/71 (7%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP----EKFKELGQAYEVLSDPEKRD 68
          YYE+L V + A+ + +KKAYRK A+K HPDK   +      +FK++ +AYEVLSD +KRD
Sbjct: 11 YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70

Query: 69 IYDQYGEDALK 79
          IYD+YG     
Sbjct: 71 IYDRYGSGPSS 81

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  123 bits (311), Expect = 8e-35
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%)

Query: 14  YYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDP---------EKFKELGQAYEVLSD 63
           +Y ILG   SA   +LK+ Y+K  +  HPDK   D          +KF E+ QA+++L +
Sbjct: 12  WYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGN 71

Query: 64  PEKRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTF 104
            E +  YD    +     +G    A    +      G  +F
Sbjct: 72  EETKREYDLQRCEDDLRNVGP-VDAQVYLEEMSWNEGDHSF 111

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  120 bits (302), Expect = 2e-34
 Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 3/69 (4%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
          YYEILGVS+ A++++LKKAYR+ A+K HPDK   P   E FK +G AY VLS+PEKR  Y
Sbjct: 9  YYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQY 68

Query: 71 DQYGEDALK 79
          DQ+G     
Sbjct: 69 DQFGSGPSS 77

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  120 bits (303), Expect = 2e-34
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKR 67
          T  Y++LGV  +AT+ ++K AY +     HPD+  G     E+F  + QAY VL     R
Sbjct: 17 TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR 76

Query: 68 DIYDQYGEDALKEGMGGAG 86
            YD+           G+G
Sbjct: 77 RKYDRGLLSDEDLRGPGSG 95

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  119 bits (301), Expect = 3e-34
 Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 3/69 (4%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
           Y +LGVS++A++ ++KKAY+K A + HPDK  DP   ++F ++ +AYE+LS+ EKR  Y
Sbjct: 19 PYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNY 78

Query: 71 DQYGEDALK 79
          D YG     
Sbjct: 79 DHYGSGPSS 87

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  115 bits (289), Expect = 2e-32
 Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 4/68 (5%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---EKFKELGQAYEVLSDPEKRDI 69
          YY+ILGV ++A++ E+KKAY + A K HPD    DP   EKF +L +AYEVLSD  KR  
Sbjct: 9  YYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68

Query: 70 YDQYGEDA 77
          YD YG   
Sbjct: 69 YDAYGSGP 76

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  112 bits (281), Expect = 4e-31
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 10/74 (13%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKG-GDP---------EKFKELGQAYEVLSD 63
          +Y ILG   SA   +LK+ Y+K  +  HPDK   D          +KF E+ QA+++L +
Sbjct: 18 WYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGN 77

Query: 64 PEKRDIYDQYGEDA 77
           E +  YD      
Sbjct: 78 EETKKKYDLQRSGP 91

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  110 bits (276), Expect = 3e-30
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 14 YYEILGVSKSA-TEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPE 65
           Y++L V++    + +L KAYR  A K+HPD+  +        E+F+ +  AYE L D E
Sbjct: 17 CYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDE 76

Query: 66 KRDIYDQYGEDA 77
           +  YD Y +  
Sbjct: 77 AKTNYDYYLDHP 88

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  102 bits (256), Expect = 1e-27
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 5  TPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYE 59
           PR S   +   ++  +    E E KK  R+  +K HPDK  +      E FK L     
Sbjct: 9  VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEIN 68

Query: 60 VLSDPEKRDIYDQYGEDALK 79
           L   EK+   DQ  + A +
Sbjct: 69 RL---EKQAFLDQNADRASR 85

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  102 bits (256), Expect = 1e-27
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)

Query: 7  RRSNNTK-YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLS 62
          RR  N+K  +++LGV   A+ DE+ KAYRK A+  HPDK   P   + FK +  A   L 
Sbjct: 21 RRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALL 80

Query: 63 DPEKRDIYD 71
             K     
Sbjct: 81 KNIKSGPSS 89

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  105 bits (264), Expect = 2e-25
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 18/170 (10%)

Query: 10  NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDK-GGDPE---KFKELGQAYEVLSDPE 65
           ++  +Y +LGVSK+A+  E+++A++K A+K HPDK   +P     F ++ +AYEVL D +
Sbjct: 19  HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDED 78

Query: 66  KRDIYDQYGEDALKEGMGGAGAAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVH-- 123
            R  YD+YGE  L++  GG   + + +      +           R          +   
Sbjct: 79  LRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFV 138

Query: 124 -----------TLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALG 162
                       L  +  +        L +   + C   +      G   
Sbjct: 139 NFYSPGSSHSHDLAPTWREFAKEVDGLLRIGA-VNCGDDRMLCRMKGVNS 187

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 91.6 bits (227), Expect = 2e-23
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 4  RTPRRSNNTKYYEILGVSKSATED--ELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVL 61
          R   R++  +  E+L + +    D   +++AY++ ++  HPDKGG     +EL   +   
Sbjct: 3  RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTF 62

Query: 62 SDPEKRDIYDQYG 74
                   +  G
Sbjct: 63 KTEVYNLRMNLGG 75

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 93.6 bits (233), Expect = 2e-21
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 7   RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE-------KFKELGQAYE 59
           ++S    YY+ILGV ++A + E+ KAYRK A++ HPD   + E       KF ++  A E
Sbjct: 377 KQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKE 436

Query: 60  VLSDPEKRDIYDQ 72
           VLSDPE R  +D 
Sbjct: 437 VLSDPEMRKKFDD 449

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score = 86.2 bits (214), Expect = 4e-21
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query: 265 FKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPG 312
           FKR  DDL  +  + L  A+ G +FAL H+ G  L +   PGE+I PG
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPG 49

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 104

 Score = 78.0 bits (193), Expect = 3e-18
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITT 176
           G      ++++      G  K+ +++    C +C GKG++ G   + C+ C G+G   T 
Sbjct: 1   GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSG-METI 59

Query: 177 RQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEV 224
                G    M+  C  C G G +I     C  C+     ++KK    
Sbjct: 60  NT---GPF-VMRSTCRRCGGRGSIII--SPCVVCRGAGQAKQKKRSGP 101

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 73.9 bits (182), Expect = 3e-17
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 14 YYEILGVSKSA-TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKR 67
            +IL ++++  T+ +LK+ +RK  + NHPDKGG P    ++ +A + L      
Sbjct: 16 ALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGIS 70

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 75.0 bits (184), Expect = 2e-16
 Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 14/104 (13%)

Query: 7   RRSNNTKYYEILGVSKSAT-------EDELKKAYRKAAMKNHPDK-GGDPEKFKELGQAY 58
           +R   + +YE+   +           +  L+K YR+   ++HPD      E+   L QAY
Sbjct: 6   QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAY 65

Query: 59  EVLSDPEKRDIYDQY---GEDALKEGMGGAGAAHNP---FDIFE 96
             L DP +R  Y        D  +E         +P     + +
Sbjct: 66  HTLKDPLRRSQYMLKLLRNIDLTQEQTSNEVTTSDPQLLLKVLD 109

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 73.7 bits (180), Expect = 8e-16
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 15  YEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE-------KFKELGQAYEVLSDPEKR 67
           ++ +G++   T +++KK YRKA +  HPDK             F EL  A+    +  ++
Sbjct: 120 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQK 179

Query: 68  DIY 70
            +Y
Sbjct: 180 PLY 182

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 71.5 bits (175), Expect = 4e-15
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 14 YYEILGVSKSATED--ELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLS 62
          Y+ + G+      D   L   ++    + HPDK             ++   + QA++ L 
Sbjct: 3  YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62

Query: 63 DPEKRDIY--DQYGEDALKE 80
           P  R  Y    +G D   E
Sbjct: 63 HPLMRAEYLLSLHGFDLASE 82

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1 Length = 79

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 8/77 (10%)

Query: 135 GTTKKLSLSRNILCPKCKGKGSKSGALGK-CYGCQGTGMKITTRQIGLGMIQQMQHVCPE 193
           G TK++ +     C  C G G+K G   + C  C G+G ++  RQ G   +QQ    CP 
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSG-QVQMRQ-GFFAVQQ---TCPH 55

Query: 194 CRGAGEVISERDKCPQC 210
           C+G G +I   D C +C
Sbjct: 56  CQGRGTLIK--DPCNKC 70

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 59.0 bits (142), Expect = 2e-10
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 13/77 (16%)

Query: 14  YYEILGVSKSATED--ELKKAYRKAAMKNHPDK-GGDPE--------KFKELGQAYEVLS 62
           Y+ ++  ++S   D  +L+  Y++     HPD      +            +  AY+ L 
Sbjct: 45  YFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLL 104

Query: 63  DPEKRDIY--DQYGEDA 77
            P  R +Y    +G + 
Sbjct: 105 APLSRGLYLLKLHGIEI 121

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 55.4 bits (133), Expect = 3e-10
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 15 YEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPE-------KFKELGQAYEVLSD 63
          ++ +G++   T +++KK YRKA +  HP K             F EL  A+    +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 52.7 bits (126), Expect = 4e-09
 Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 11/59 (18%)

Query: 15  YEILGVSKSATEDELKKAYRKAAMKNHPDK----GGDPE-------KFKELGQAYEVLS 62
           ++ + +      + ++K+Y++A +  HPDK    G            F+ L +A++  +
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 8e-06
 Identities = 46/361 (12%), Positives = 92/361 (25%), Gaps = 104/361 (28%)

Query: 9   SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPD-----KGGDPEKFKELGQAYEVLSD 63
           +  T +  +   S + T DE+K    K       D        +P +   +    E + D
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA---ESIRD 339

Query: 64  PEKR-DIYDQYGEDALKEGMGGAGAAHNPFDI---FESFFGGGTFGAGGSSRGRRRKQGE 119
                D +     D L   +  +     P +    F+       F               
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS---VF-------------PP 383

Query: 120 DVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQI 179
                  + L  ++    K  S    ++  K          L +    + T        I
Sbjct: 384 SAHIPTIL-LSLIWFDVIK--SDVMVVVN-KLHKYS-----LVEKQPKEST--------I 426

Query: 180 GLGMIQQMQHVCPECRGAGEV---ISERDKCPQCKANKVTQEKKV-------LEVHVEKG 229
            +  I     +  +      +   I +    P+   +       +       +  H++  
Sbjct: 427 SIPSIY--LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNI 484

Query: 230 MQH----------------GQKIAFEGQADEAPDTITGDIVFILQLK--------EHPKF 265
                               QKI  +  A  A  +I      + QLK          PK+
Sbjct: 485 EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT---LQQLKFYKPYICDNDPKY 541

Query: 266 KRKFDDLY-----VDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYFDNFTS 320
           +R  + +      ++  L  ++     + AL               E     I+ +    
Sbjct: 542 ERLVNAILDFLPKIEENLICSKYTDLLRIAL-----------MAEDE----AIFEEAHKQ 586

Query: 321 V 321
           V
Sbjct: 587 V 587

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 1e-05
 Identities = 56/385 (14%), Positives = 98/385 (25%), Gaps = 102/385 (26%)

Query: 15  YEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYG 74
           Y+ L +S   TE        +  ++       D + F +    Y V        +     
Sbjct: 91  YKFL-MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK----YNVSRLQPYLKL----- 140

Query: 75  EDALKE----------GMGGAG----AA----------HNPFDIF--------------- 95
             AL E          G+ G+G    A              F IF               
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLE 200

Query: 96  --ESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSL-------SRNI 146
             +            +SR       +  +H+++  L  L      +  L       +   
Sbjct: 201 MLQKLL--YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258

Query: 147 LCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGL---GMIQQMQHVCPECRGAGEVISE 203
                        A      C+   + +TTR   +          H+  +         E
Sbjct: 259 W-----------NAFN--LSCK---ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 204 RD----KCPQCKANKVTQE-KKV--LEVHVEKGMQHGQKIAFEGQADEAPDTITGDI-VF 255
                 K   C+   + +E        + +           ++       D +T  I   
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 256 ILQLKEHPKFKRKFDDLYV--DHTLSLTEALCGF---------QFALTHLDGRQLLIKSN 304
           +  L+   ++++ FD L V        T  L               +  L    L+ K  
Sbjct: 363 LNVLEP-AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421

Query: 305 PGEIIK-PGIYFD-NFTSVNLY-LH 326
               I  P IY +      N Y LH
Sbjct: 422 KESTISIPSIYLELKVKLENEYALH 446

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	334
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.88
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.86
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.85
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.85
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.85
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.84
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.83
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.83
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.83
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.82
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.82
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.82
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.81
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.81
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.81
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.79
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.77
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.77
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.76
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.76
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.75
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.73
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.73
2guz_A	71	Mitochondrial import inner membrane translocase su	99.72
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.68
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.68
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.67
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.64
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.62
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.62
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.62
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.61
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.6
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.6
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.59
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.58
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	99.5
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.14
2guz_B	65	Mitochondrial import inner membrane translocase su	99.13
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.01
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	98.94
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.74
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.7
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.67
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.59
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	98.18
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	98.08
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.79
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	97.35
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	97.25
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	96.93
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	96.76
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	91.19

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=1.6e-58  Score=434.69  Aligned_cols=258  Identities=28%  Similarity=0.411  Sum_probs=131.7

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCC
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGG   84 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~   84 (334)
                      .++.+|||++|||+++|+.+|||+|||+||++||||+|+++   ++|++|++||++|+||.+|+.||+|+..+...++++
T Consensus        24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~  103 (329)
T 3lz8_A           24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR  103 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence            45678999999999999999999999999999999998754   799999999999999999999999854432222111


Q ss_pred             -----CC--CCCCcchhhccccCCCCCCCCCCCCCCcccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCc
Q 019908           85 -----AG--AAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK  157 (334)
Q Consensus        85 -----~~--~~~~~~d~f~~~Fg~~~~~~~~~~~~~~~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~  157 (334)
                           ++  ++.+|.|+|++|||+++++  +  ..+...++.|+.+.|.|||+|+|.|+++++.+++.+.|    +.   
T Consensus       104 ~~~~~~~~f~~~~f~diF~~~Fg~~g~~--~--~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~----g~---  172 (329)
T 3lz8_A          104 QRQTHEQSYSQQDFDDIFSSMFGQQAHQ--R--RRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN----VF---  172 (329)
T ss_dssp             -------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC----SC---
T ss_pred             ccccccCCcCCCchhhhhHhhhcCcCCC--C--CCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec----CC---
Confidence                 11  1235778999999753211  1  12234678999999999999999999999998876532    11   


Q ss_pred             cCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEE
Q 019908          158 SGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA  237 (334)
Q Consensus       158 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~  237 (334)
                                   |.+                                         .+...++++|+||||+++|++|+
T Consensus       173 -------------G~v-----------------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir  198 (329)
T 3lz8_A          173 -------------GMI-----------------------------------------ESETPKTLNVKIPAGVVDGQRIR  198 (329)
T ss_dssp             -------------C-C-----------------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred             -------------eEE-----------------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence                         110                                         12335689999999999999999


Q ss_pred             EecCcCCCC-CCCCcCEEEEEEEEeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc-
Q 019908          238 FEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF-  315 (334)
Q Consensus       238 l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~-  315 (334)
                      |+|+|++.+ ++.+|||||+|+|++|+.|+|+|+||+++++|+|+||++|+++.|+||||+ +.|+||++  +++|... 
T Consensus       199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~r  275 (329)
T 3lz8_A          199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLR  275 (329)
T ss_dssp             ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEE
T ss_pred             EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEE
Confidence            999999974 578999999999999999999999999999999999999999999999998 79999988  4676544 


Q ss_pred             -----CC--CCCccEEEEEEEEEee
Q 019908          316 -----DN--FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       316 -----~~--~~~GdL~v~~~V~~p~  333 (334)
                           +|  ..+|||||+|+|.||-
T Consensus       276 l~G~GmP~~~~rGDL~v~~~V~~P~  300 (329)
T 3lz8_A          276 IKGKGLVSKTHTGDLFAVIKIVMPT  300 (329)
T ss_dssp             ETTCSCBCSSCBCCEEEEEEECCCS
T ss_pred             EcCCCCCCCCCCCCEEEEEEEECCC
Confidence                 33  4689999999999994

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=2.3e-55  Score=398.95  Aligned_cols=218  Identities=44%  Similarity=0.791  Sum_probs=205.3

Q ss_pred             ccccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCC
Q 019908          115 RKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPEC  194 (334)
Q Consensus       115 ~~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C  194 (334)
                      +.++.|+.+.|++||+|+|+|+++++.+++.+.|++|+|+|...+...+|+.|+|+|+++..+++++ |+++++.+|+.|
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~C   86 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDVC   86 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTTC
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCCC
Confidence            4578999999999999999999999999999999999999999887788999999999999899999 888999999999


Q ss_pred             ccceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEE
Q 019908          195 RGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYV  274 (334)
Q Consensus       195 ~G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~  274 (334)
                      +|+|+++..+++|+.|+|.|++.+.++++|+||||+++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||+
T Consensus        87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~  166 (248)
T 1nlt_A           87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVY  166 (248)
T ss_dssp             SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred             CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEE
Confidence            99999996679999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             EEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------CC----CCCccEEEEEEEEEee
Q 019908          275 DHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------DN----FTSVNLYLHEYCFLWL  333 (334)
Q Consensus       275 ~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~~----~~~GdL~v~~~V~~p~  333 (334)
                      +++|||+|||+|++++|+||||+.+.|+||+|+++++|...      +|    ..+|||||+|+|+||-
T Consensus       167 ~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~  235 (248)
T 1nlt_A          167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE  235 (248)
T ss_dssp             EEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC
T ss_pred             EEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCC
Confidence            99999999999999999999998899999999888888754      22    1589999999999993

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=1.3e-37  Score=269.38  Aligned_cols=152  Identities=34%  Similarity=0.517  Sum_probs=128.4

Q ss_pred             cccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccc
Q 019908          118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGA  197 (334)
Q Consensus       118 ~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~  197 (334)
                      ++|+.++|++||+|+|+|+++++.+.+                                             +       
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~---------------------------------------------~-------   29 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH---------------------------------------------K-------   29 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE---------------------------------------------E-------
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec---------------------------------------------c-------
Confidence            357889999999999999999986542                                             2       


Q ss_pred             eEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEEEe
Q 019908          198 GEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHT  277 (334)
Q Consensus       198 G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~  277 (334)
                               |+.|+|.+++.+.++++|+||||+++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus        30 ---------c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~  100 (181)
T 3agx_A           30 ---------RLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR  100 (181)
T ss_dssp             ---------EECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred             ---------cCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence                     23333333456688999999999999999999999999888899999999999999999999999999999


Q ss_pred             cCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------C-----CCCCccEEEEEEEEEe
Q 019908          278 LSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------D-----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       278 I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~-----~~~~GdL~v~~~V~~p  332 (334)
                      |||+||++|+++.|+||||+.+.|++|++  +++|...      +     ++.+|||||+|+|.||
T Consensus       101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P  164 (181)
T 3agx_A          101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFP  164 (181)
T ss_dssp             EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECC
T ss_pred             cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECC
Confidence            99999999999999999998888998765  4565533      2     3468999999999999

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.7e-35  Score=253.28  Aligned_cols=150  Identities=32%  Similarity=0.480  Sum_probs=133.1

Q ss_pred             cccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccc
Q 019908          118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGA  197 (334)
Q Consensus       118 ~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~  197 (334)
                      +.|+.+++++||+|+|+|+++++.+.+.+.|+.                                               
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~-----------------------------------------------   35 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH-----------------------------------------------   35 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT-----------------------------------------------
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC-----------------------------------------------
Confidence            579999999999999999999999998877631                                               


Q ss_pred             eEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCC-CCCCCCcCEEEEEEEEeCCCceeecCcEEEEE
Q 019908          198 GEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE-APDTITGDIVFILQLKEHPKFKRKFDDLYVDH  276 (334)
Q Consensus       198 G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~  276 (334)
                                      +++.+.++++|+||||+++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||++++
T Consensus        36 ----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~   99 (180)
T 2q2g_A           36 ----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKV   99 (180)
T ss_dssp             ----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEE
T ss_pred             ----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEE
Confidence                            1245578899999999999999999999999 68889999999999999999999999999999


Q ss_pred             ecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------C-----CCCCccEEEEEEEEEe
Q 019908          277 TLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------D-----NFTSVNLYLHEYCFLW  332 (334)
Q Consensus       277 ~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~-----~~~~GdL~v~~~V~~p  332 (334)
                      +|||+||++|+++.|+||||+.+.|++|++  +++|...      +     ++.+|||||+|+|.||
T Consensus       100 ~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P  164 (180)
T 2q2g_A          100 TIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFP  164 (180)
T ss_dssp             EEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECC
T ss_pred             EcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECC
Confidence            999999999999999999998888988865  4665533      2     2468999999999999

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=2.6e-33  Score=240.15  Aligned_cols=147  Identities=30%  Similarity=0.421  Sum_probs=126.9

Q ss_pred             ccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccce
Q 019908          119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAG  198 (334)
Q Consensus       119 ~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G  198 (334)
                      +|+.+++++||+|+|+|+++++.+.+..    +                  .                            
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~------------------~----------------------------   30 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P------------------H----------------------------   30 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE----T------------------T----------------------------
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec----C------------------C----------------------------
Confidence            3789999999999999999999887541    0                  0                            


Q ss_pred             EEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCC-CCCCCCcCEEEEEEEEeCCCceeecCcEEEEEe
Q 019908          199 EVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE-APDTITGDIVFILQLKEHPKFKRKFDDLYVDHT  277 (334)
Q Consensus       199 ~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~  277 (334)
                                     |.+ +.++++|+||||+++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus        31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~   94 (170)
T 1c3g_A           31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP   94 (170)
T ss_dssp             ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred             ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence                           112 467899999999999999999999995 578889999999999999999999999999999


Q ss_pred             cCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------C-----CCCCccEEEEEEEEEee
Q 019908          278 LSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------D-----NFTSVNLYLHEYCFLWL  333 (334)
Q Consensus       278 I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~-----~~~~GdL~v~~~V~~p~  333 (334)
                      |||+||++|+++.|+||||+.+.|++|++  +++|...      +     ++.+|||||+|+|.||-
T Consensus        95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~  159 (170)
T 1c3g_A           95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPI  159 (170)
T ss_dssp             CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCS
T ss_pred             cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCC
Confidence            99999999999999999998888998865  4555433      2     23589999999999993

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.88  E-value=1.5e-23  Score=164.96  Aligned_cols=90  Identities=52%  Similarity=0.881  Sum_probs=66.1

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCC
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAG   86 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~   86 (334)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++.    ++|++|++||++|+||.+|+.||++|+.++..+..+++
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~   81 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG   81 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence            46899999999999999999999999999999998742    79999999999999999999999999988765321111


Q ss_pred             ---CCCCcchhhccccC
Q 019908           87 ---AAHNPFDIFESFFG  100 (334)
Q Consensus        87 ---~~~~~~d~f~~~Fg  100 (334)
                         ++.++.++|++||+
T Consensus        82 ~~~~~~~~~~~f~~~f~   98 (103)
T 1bq0_A           82 GFGGGADFSDIFGDVFG   98 (103)
T ss_dssp             -----------------
T ss_pred             CCCCCCCHHHHHHHHHH
Confidence               12245677777775

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=3.6e-22  Score=152.50  Aligned_cols=73  Identities=51%  Similarity=0.880  Sum_probs=68.2

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhhcC
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG   81 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~   81 (334)
                      ....+||+||||+++|+.+|||+|||+|+++||||+++++   ++|++|++||++|+||.+|+.||++|..++..+
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   79 (88)
T 2ctr_A            4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG   79 (88)
T ss_dssp             CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence            4678999999999999999999999999999999999874   799999999999999999999999999888754

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.85  E-value=3.2e-22  Score=154.01  Aligned_cols=75  Identities=59%  Similarity=0.953  Sum_probs=69.2

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-hHHHHHHHHHHhhcCCCcccchhcccChhhhhcC
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-PEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG   81 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~   81 (334)
                      .+....|||+||||+++|+.+|||+|||+|+++||||+++. .++|++|++||++|+||.+|+.||++|.+++..+
T Consensus         3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~   78 (92)
T 2o37_A            3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG   78 (92)
T ss_dssp             -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred             ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence            35678899999999999999999999999999999999964 5899999999999999999999999999988753

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.85  E-value=2.7e-22  Score=147.79  Aligned_cols=70  Identities=59%  Similarity=0.917  Sum_probs=62.9

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHhhcCCCcccchhcccChh
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDIYDQYGED   76 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-~~f~~i~~Ay~~L~d~~~r~~YD~~G~~   76 (334)
                      .|....+||+||||+++|+.++||+|||+|+++||||++++. +.|++|++||++|+||.+|+.||++|++
T Consensus         3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            366789999999999999999999999999999999999864 8999999999999999999999999863

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.85  E-value=5.9e-22  Score=147.51  Aligned_cols=69  Identities=54%  Similarity=1.091  Sum_probs=64.6

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++++   +.|++|++||++|+||.+|+.||++|.+++.
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   73 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK   73 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence            36899999999999999999999999999999999754   8999999999999999999999999987765

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.84  E-value=1.1e-21  Score=147.75  Aligned_cols=70  Identities=51%  Similarity=0.894  Sum_probs=64.8

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDA   77 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~   77 (334)
                      .+...+||+||||+++|+.+|||+|||+|+++||||++++.     ++|++|++||++|+||.+|+.||++|+.+
T Consensus         5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   79 (82)
T 2ej7_A            5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP   79 (82)
T ss_dssp             CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred             CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            45678999999999999999999999999999999999863     68999999999999999999999999754

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=1.4e-21  Score=150.41  Aligned_cols=74  Identities=50%  Similarity=0.820  Sum_probs=67.2

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhhhc
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE   80 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~   80 (334)
                      ......|||+||||+++|+.+|||+|||+|+++||||++++.     ++|++|++||++|+||.+|+.||++|..++..
T Consensus         4 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (92)
T 2dmx_A            4 GSSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA   82 (92)
T ss_dssp             CCCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred             CCCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            345678999999999999999999999999999999999852     78999999999999999999999999876654

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=1.5e-21  Score=145.71  Aligned_cols=69  Identities=57%  Similarity=0.992  Sum_probs=64.5

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGED   76 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~   76 (334)
                      .....|||+||||+++|+.+|||+|||+|+++||||+++++   +.|++|++||++|+||.+|+.||++|..
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~   74 (78)
T 2ctp_A            3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG   74 (78)
T ss_dssp             CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence            35678999999999999999999999999999999999764   8999999999999999999999999864

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.83  E-value=1.8e-21  Score=145.60  Aligned_cols=69  Identities=51%  Similarity=0.840  Sum_probs=63.9

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHhhcCCCcccchhcccChh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQYGED   76 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~   76 (334)
                      .....|||+||||+++|+.+|||+|||+|+++||||++++    .++|++|++||++|+||.+|+.||++|..
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   75 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG   75 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence            3467899999999999999999999999999999999974    28999999999999999999999999864

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.82  E-value=3.9e-21  Score=146.75  Aligned_cols=68  Identities=46%  Similarity=0.830  Sum_probs=63.7

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChh
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGED   76 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~   76 (334)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++++   ++|++|++||++|+||.+|+.||++|+.
T Consensus        14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   84 (88)
T 2cug_A           14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG   84 (88)
T ss_dssp             SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred             cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999999754   8999999999999999999999999864

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=1.3e-20  Score=146.99  Aligned_cols=73  Identities=33%  Similarity=0.624  Sum_probs=65.3

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHhhcCCCcccchhcc--cChhhhh
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQ--YGEDALK   79 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~~f~~i~~Ay~~L~d~~~r~~YD~--~G~~~~~   79 (334)
                      ..+...+||+||||+++|+.+|||+|||+|+++||||++++    .++|++|++||++|+||.+|+.||+  .+.+.+.
T Consensus        12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~   90 (99)
T 2yua_A           12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLR   90 (99)
T ss_dssp             CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHH
T ss_pred             CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccccccc
Confidence            35678999999999999999999999999999999999974    2799999999999999999999998  3455544

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=7.1e-21  Score=149.83  Aligned_cols=101  Identities=24%  Similarity=0.566  Sum_probs=88.5

Q ss_pred             ccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccc
Q 019908          119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGA  197 (334)
Q Consensus       119 ~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~  197 (334)
                      .++.+.|+|||+|+|+|..+++.+++.+.|+.|+|+|..++. ..+|+.|+|+|++....  |  +++ ++.+|+.|+|+
T Consensus         2 ~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G--~~~-~~~~C~~C~G~   76 (104)
T 2ctt_A            2 SSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--G--PFV-MRSTCRRCGGR   76 (104)
T ss_dssp             CCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--T--TEE-EEEECSSSSSS
T ss_pred             CceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--C--CEE-EEEECCcCCCc
Confidence            467889999999999999999999999999999999998876 46899999999876543  3  443 46899999999


Q ss_pred             eEEEccCCCCCccCCCceeEEeEEEEEEe
Q 019908          198 GEVISERDKCPQCKANKVTQEKKVLEVHV  226 (334)
Q Consensus       198 G~~~~~~~~C~~C~G~g~~~~~~~~~v~I  226 (334)
                      |+++.  ++|+.|+|.|++.+.+.|+|+|
T Consensus        77 G~~i~--~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           77 GSIII--SPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             SEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred             ceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence            99986  9999999999999988888765

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.81  E-value=4.5e-21  Score=149.43  Aligned_cols=69  Identities=57%  Similarity=0.973  Sum_probs=61.9

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccChhhhhc
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE   80 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~   80 (334)
                      .|||+||||+++|+.+|||+|||+|+++||||++++.     +.|++|++||++|+||.+|+.||++|.+++..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            5899999999999999999999999999999999863     78999999999999999999999999877653

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.81  E-value=7.3e-21  Score=151.72  Aligned_cols=72  Identities=26%  Similarity=0.578  Sum_probs=66.2

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      +....|||+||||+++|+.+|||+|||+|+++||||++++    .++|++|++||++|+||.+|+.||++|..++.
T Consensus        16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            4567899999999999999999999999999999999984    38999999999999999999999999987653

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.81  E-value=1.7e-20  Score=148.88  Aligned_cols=72  Identities=47%  Similarity=0.828  Sum_probs=66.8

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hHHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      .....+||+||||+++|+.+|||+|||+|+++||||++++    .++|++|++||++|+||.+|+.||++|..++.
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            4467899999999999999999999999999999999985    27999999999999999999999999988764

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.79  E-value=4.3e-20  Score=142.70  Aligned_cols=68  Identities=34%  Similarity=0.589  Sum_probs=62.5

Q ss_pred             CCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------hHHHHHHHHHHhhcCCCcccchhcccC
Q 019908            7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----------PEKFKELGQAYEVLSDPEKRDIYDQYG   74 (334)
Q Consensus         7 ~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~----------~~~f~~i~~Ay~~L~d~~~r~~YD~~G   74 (334)
                      ..+...|||+||||+++|+.+|||+|||+|+++||||+++.          .++|++|++||++|+||.+|+.||.+.
T Consensus        11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l   88 (94)
T 1wjz_A           11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence            34678899999999999999999999999999999999863          179999999999999999999999865

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.77  E-value=1.4e-19  Score=159.47  Aligned_cols=86  Identities=40%  Similarity=0.782  Sum_probs=71.7

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---HHHHHHHHHHhhcCCCcccchhcccChhhhhcCCCCCCC
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAGA   87 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~   87 (334)
                      .|||++|||+++|+.+|||+|||+||++||||++++ +   ++|++|++||++|+||.+|+.||++|+.++....   ++
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~---~~   78 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ---GG   78 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC---SC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc---cc
Confidence            589999999999999999999999999999999964 2   7999999999999999999999999988776432   12


Q ss_pred             CCCcchhhccccC
Q 019908           88 AHNPFDIFESFFG  100 (334)
Q Consensus        88 ~~~~~d~f~~~Fg  100 (334)
                      ....+.+|...|+
T Consensus        79 ~~~~~~~~~~~fg   91 (210)
T 3apq_A           79 QYESWSYYRYDFG   91 (210)
T ss_dssp             CCCCHHHHHHSSS
T ss_pred             ccccccccccccc
Confidence            2334455655554

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.77  E-value=4.6e-20  Score=137.70  Aligned_cols=68  Identities=21%  Similarity=0.404  Sum_probs=61.8

Q ss_pred             CCCccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccChh
Q 019908            8 RSNNTKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGED   76 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~   76 (334)
                      ..+..++|+||||+++  |+.+|||+|||+||++||||++++.++|++|++||++|+|+.+|.. |.||..
T Consensus         7 ~~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~   76 (79)
T 1faf_A            7 RADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGT   76 (79)
T ss_dssp             HHHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred             chhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence            3455789999999999  9999999999999999999999999999999999999999999887 557754

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.76  E-value=1.9e-20  Score=159.16  Aligned_cols=68  Identities=34%  Similarity=0.553  Sum_probs=61.1

Q ss_pred             CCCccccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccCh
Q 019908            8 RSNNTKYYEILGVSKSAT--EDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGE   75 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~--~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G~   75 (334)
                      ..+..+||++|||+++|+  .+|||+|||++|+++|||+++++++|++|++||++|+||.+|+.||+||.
T Consensus         7 ~~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E            7 REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            345689999999999999  69999999999999999999999999999999999999999999999995

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.76  E-value=3.9e-20  Score=147.37  Aligned_cols=66  Identities=33%  Similarity=0.554  Sum_probs=62.9

Q ss_pred             CccccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccCh
Q 019908           10 NNTKYYEILGVSKSATE--DELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGE   75 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~--~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G~   75 (334)
                      +..+||+||||+++|+.  ++||+|||+||++||||++++.++|++|++||++|+||.+|+.||.+|.
T Consensus         6 ~~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            45789999999999999  9999999999999999999999999999999999999999999999874

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.75  E-value=1.7e-19  Score=143.15  Aligned_cols=68  Identities=35%  Similarity=0.618  Sum_probs=63.4

Q ss_pred             CCCccccccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------hHHHHHHHHHHhhcCCCcccchhcccCh
Q 019908            8 RSNNTKYYEILGVSKSA-TEDELKKAYRKAAMKNHPDKGGD-------PEKFKELGQAYEVLSDPEKRDIYDQYGE   75 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a-~~~eik~ayr~la~~~hPd~~~~-------~~~f~~i~~Ay~~L~d~~~r~~YD~~G~   75 (334)
                      .....|||+||||+++| +.+|||+|||+|+++||||++++       .++|++|++||++|+||.+|+.||+++.
T Consensus        11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            34678999999999999 99999999999999999999986       2799999999999999999999999875

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.73  E-value=1.4e-18  Score=146.45  Aligned_cols=68  Identities=34%  Similarity=0.571  Sum_probs=62.3

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHHHhhcCCCcccchhcccCh
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----------EKFKELGQAYEVLSDPEKRDIYDQYGE   75 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----------~~f~~i~~Ay~~L~d~~~r~~YD~~G~   75 (334)
                      .+...|||+||||+++|+.++||+|||+|+++||||+++++          ++|++|++||++|+||.+|+.||..+.
T Consensus         6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            35678999999999999999999999999999999998643          799999999999999999999998654

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=1.5e-18  Score=132.90  Aligned_cols=61  Identities=38%  Similarity=0.524  Sum_probs=56.3

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccch
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDI   69 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~   69 (334)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++++   ++|++|++||++|+|+.+|+.
T Consensus        24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            3568999999999999999999999999999999999654   899999999999999999874

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.72  E-value=1.8e-18  Score=126.42  Aligned_cols=65  Identities=28%  Similarity=0.434  Sum_probs=58.4

Q ss_pred             CCCCCCCccccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccc
Q 019908            4 RTPRRSNNTKYYEILGVSK-SATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRD   68 (334)
Q Consensus         4 ~~~~~~~~~~~y~iLgv~~-~a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~   68 (334)
                      .....+...++|+||||++ +|+.+|||+|||+|+++||||+++++++|++|++||++|+|+..|+
T Consensus         6 ~~~~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A            6 GFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             CCCSSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence            3445567789999999999 7999999999999999999999999999999999999999887663

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.68  E-value=5.2e-17  Score=128.48  Aligned_cols=71  Identities=20%  Similarity=0.200  Sum_probs=61.5

Q ss_pred             EeCCCceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------CC--CCCccEEEEEEEEE
Q 019908          260 KEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------DN--FTSVNLYLHEYCFL  331 (334)
Q Consensus       260 ~~~~~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~~--~~~GdL~v~~~V~~  331 (334)
                      ++|+.|+|+|+||+++++|||.||++|+++.|+||||. +.|+||+|  +++|...      +|  +.+|||||+|+|.|
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~~~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSKTHTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCSSCBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCCCCCcCEEEEEEEEC
Confidence            68999999999999999999999999999999999995 89999988  5676644      22  36899999999999


Q ss_pred             ee
Q 019908          332 WL  333 (334)
Q Consensus       332 p~  333 (334)
                      |-
T Consensus        79 P~   80 (109)
T 3i38_A           79 PT   80 (109)
T ss_dssp             CS
T ss_pred             CC
Confidence            94

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.68  E-value=5.3e-17  Score=130.92  Aligned_cols=70  Identities=33%  Similarity=0.403  Sum_probs=62.5

Q ss_pred             CceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc------CCC----CCccEEEEEEEEEee
Q 019908          264 KFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF------DNF----TSVNLYLHEYCFLWL  333 (334)
Q Consensus       264 ~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~------~~~----~~GdL~v~~~V~~p~  333 (334)
                      .|+|+|+||+++++|+|.+|++|+++.|+||||+.+.|+||+|+++++|...      +|.    .+|||||+|+|.||-
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~   80 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE   80 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence            4999999999999999999999999999999999899999999888898754      331    589999999999993

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.67  E-value=8e-18  Score=127.87  Aligned_cols=63  Identities=30%  Similarity=0.332  Sum_probs=57.0

Q ss_pred             CCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccc
Q 019908            6 PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRD   68 (334)
Q Consensus         6 ~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~   68 (334)
                      +......++|+||||+++|+.+|||+|||+||++||||++++.     ++|++|++||++|+|...|.
T Consensus        10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~   77 (88)
T 1iur_A           10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD   77 (88)
T ss_dssp             CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence            4456778999999999999999999999999999999999862     79999999999999887764

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.62  E-value=7.2e-17  Score=138.00  Aligned_cols=62  Identities=27%  Similarity=0.497  Sum_probs=57.1

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCCCcccchh
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIY   70 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d~~~r~~Y   70 (334)
                      +...+||++|||+++|+.+|||+|||+|+++||||++++.       ++|++|++||++|+|+.+|+.|
T Consensus       114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            4447999999999999999999999999999999998642       5999999999999999999987

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.62  E-value=6.8e-17  Score=137.99  Aligned_cols=62  Identities=21%  Similarity=0.352  Sum_probs=57.9

Q ss_pred             ccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcccC
Q 019908           13 KYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQYG   74 (334)
Q Consensus        13 ~~y~iLgv~~~a--~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~~G   74 (334)
                      |||++|||+++|  +.++||+|||+|+++||||++++.         ++|+.|++||++|+||.+|+.||..-
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            799999999999  999999999999999999998752         48999999999999999999999853

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.62  E-value=9e-17  Score=126.32  Aligned_cols=57  Identities=18%  Similarity=0.283  Sum_probs=51.2

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----------hHHHHHHHHHHhhcCCCc
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-----------PEKFKELGQAYEVLSDPE   65 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~-----------~~~f~~i~~Ay~~L~d~~   65 (334)
                      .+...|||++|+++. |+.+|||+|||++|++||||++++           .++|++|++||++|+|+.
T Consensus        37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            456689999999996 999999999999999999999752           368999999999999986

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.61  E-value=1.5e-16  Score=139.72  Aligned_cols=63  Identities=21%  Similarity=0.380  Sum_probs=57.6

Q ss_pred             CccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           10 NNTKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        10 ~~~~~y~iLgv~~~--a~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      ...|||++|||+++  ++.++||+|||+|+++||||++++.         ++|++|++||++|+||.+|+.||.
T Consensus        41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            36799999999986  7899999999999999999998742         579999999999999999999996

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.60  E-value=4.1e-17  Score=169.96  Aligned_cols=74  Identities=41%  Similarity=0.785  Sum_probs=40.9

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhhhcC
Q 019908            8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG   81 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~   81 (334)
                      .....|||++|||+++|+.+|||+|||+||++||||++++.    ++|++|++||++|+||.+|+.||+||++++..+
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~   94 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   94 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence            45678999999999999999999999999999999999642    799999999999999999999999999887654

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.60  E-value=1.5e-16  Score=121.23  Aligned_cols=52  Identities=29%  Similarity=0.478  Sum_probs=48.1

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCC
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSD   63 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d   63 (334)
                      .++|++|||+++|+.+|||+|||++|++||||+|++.       ++|++|++||++|.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999998752       589999999999964

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.59  E-value=1e-15  Score=138.41  Aligned_cols=129  Identities=20%  Similarity=0.289  Sum_probs=81.8

Q ss_pred             eecCcccccccceeeeCCCCCCCCCccC----------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          132 LYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       132 ~~~G~~~~i~~~~~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      .|.|....-..  ...|+.|+|+|....          ...+|+.|+|+|+++.           ...+|+.|+|.|++.
T Consensus        43 ~C~G~G~~~g~--~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~-----------~~~~C~~C~G~g~~~  109 (248)
T 1nlt_A           43 ECEGRGGKKGA--VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID-----------PKDRCKSCNGKKVEN  109 (248)
T ss_dssp             TTTTCSBSTTT--CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC-----------TTSBCSSSTTSCEEE
T ss_pred             CCcCccCCCCC--CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEec-----------cCCCCcccCCCceEe
Confidence            35666655332  378999999997521          2357999999998662           127999999998754


Q ss_pred             ccCC-----CCCcc------------------CCCceeEEeE--------------------------------------
Q 019908          202 SERD-----KCPQC------------------KANKVTQEKK--------------------------------------  220 (334)
Q Consensus       202 ~~~~-----~C~~C------------------~G~g~~~~~~--------------------------------------  220 (334)
                      ..+.     +--.-                  .|.-++.-..                                      
T Consensus       110 ~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~  189 (248)
T 1nlt_A          110 ERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGD  189 (248)
T ss_dssp             EEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSC
T ss_pred             eeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCCC
Confidence            2100     00000                  0111111111                                      


Q ss_pred             EEEEEeccC--ccCCcEEEEecCcCCCCCC-CCcCEEEEEEEEeCCC--ceeecCcEE
Q 019908          221 VLEVHVEKG--MQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPK--FKRKFDDLY  273 (334)
Q Consensus       221 ~~~v~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDL~v~i~v~~~~~--f~r~g~dL~  273 (334)
                      .++|+||||  +++|++++|+|+|++.... ..|||||+|+|+.|+.  ++.+..+|+
T Consensus       190 ~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~l  247 (248)
T 1nlt_A          190 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKKL  247 (248)
T ss_dssp             EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC------------
T ss_pred             EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHhh
Confidence            589999999  9999999999999986433 6799999999998887  777776654

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.58  E-value=2.9e-16  Score=135.06  Aligned_cols=65  Identities=31%  Similarity=0.575  Sum_probs=59.4

Q ss_pred             CCCcccccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCC-hHHHHHHHHHHhhcCCCcccchhcc
Q 019908            8 RSNNTKYYEIL------GVSK-SATEDELKKAYRKAAMKNHPDKGGD-PEKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus         8 ~~~~~~~y~iL------gv~~-~a~~~eik~ayr~la~~~hPd~~~~-~~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .+...|||++|      |+++ +|+.++||+|||+|+++||||++++ .++|++|++||++|+||.+|+.||.
T Consensus         7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~   79 (181)
T 3uo3_A            7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYML   79 (181)
T ss_dssp             CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHH
Confidence            45668999999      4665 8999999999999999999999984 5899999999999999999999998

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=99.50  E-value=3.4e-14  Score=105.80  Aligned_cols=77  Identities=31%  Similarity=0.778  Sum_probs=65.6

Q ss_pred             CcccccccceeeeCCCCCCCCCccCCc-ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCC
Q 019908          135 GTTKKLSLSRNILCPKCKGKGSKSGAL-GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKAN  213 (334)
Q Consensus       135 G~~~~i~~~~~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~  213 (334)
                      |.+++|.+++.+.|+.|+|+|...... .+|+.|+|+|+++..+    |+++ ++.+|+.|+|+|+++.  ++|+.|+|.
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~   73 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFA-VQQTCPHCQGRGTLIK--DPCNKCHGH   73 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEE-EEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCE-EeeECcCCCCccEECC--CcCCCCCCe
Confidence            677889999999999999999877654 6899999999887633    5554 5689999999999875  899999999


Q ss_pred             ceeEE
Q 019908          214 KVTQE  218 (334)
Q Consensus       214 g~~~~  218 (334)
                      |++.+
T Consensus        74 G~~~~   78 (79)
T 1exk_A           74 GRVER   78 (79)
T ss_dssp             SEEEC
T ss_pred             EEEee
Confidence            99864

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.14  E-value=1.2e-11  Score=97.62  Aligned_cols=53  Identities=23%  Similarity=0.374  Sum_probs=46.0

Q ss_pred             EEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          222 LEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       222 ~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      ++|+||+|+++|++++|+|+|++..+ .+|||||+|+|..|+.++.++.+++.+
T Consensus        40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~~   92 (109)
T 3i38_A           40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELWQQ   92 (109)
T ss_dssp             EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred             EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHHHH
Confidence            78999999999999999999999754 789999999999998887776665543

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.13  E-value=2.8e-11  Score=86.00  Aligned_cols=52  Identities=21%  Similarity=0.218  Sum_probs=48.9

Q ss_pred             ccccccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcC
Q 019908           11 NTKYYEILGVSKS---ATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLS   62 (334)
Q Consensus        11 ~~~~y~iLgv~~~---a~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~   62 (334)
                      ..+.|.||||+++   ++.++|++|||+|...+|||+.+++....+|++|++.|.
T Consensus         3 ~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~   57 (65)
T 2guz_B            3 LDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLK   57 (65)
T ss_dssp             HHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            4568999999999   999999999999999999999999999999999999985

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.01  E-value=1.2e-10  Score=93.58  Aligned_cols=54  Identities=17%  Similarity=0.210  Sum_probs=43.0

Q ss_pred             EEEEEeccC--ccCCcEEEEecCcCCCCCC-CCcCEEEEEEEEeCCC--ceeecCcEEE
Q 019908          221 VLEVHVEKG--MQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPK--FKRKFDDLYV  274 (334)
Q Consensus       221 ~~~v~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDL~v~i~v~~~~~--f~r~g~dL~~  274 (334)
                      .++|+||+|  +++|++++|+|+|++..++ ..|||||+|+|+.|..  ++.++.+++.
T Consensus        35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~   93 (121)
T 1xao_A           35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLE   93 (121)
T ss_dssp             EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHH
T ss_pred             EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
Confidence            478999999  9999999999999996433 6899999999998887  7776665543

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=98.94  E-value=4.8e-10  Score=106.82  Aligned_cols=62  Identities=47%  Similarity=0.770  Sum_probs=53.6

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      ..++|++||+.+.++.++|+++|+++++++|||+.+++       ++|++|++||++|+|+++|+.||+
T Consensus       381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            45899999999999999999999999999999998864       589999999999999999999997

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.74  E-value=4e-09  Score=90.58  Aligned_cols=52  Identities=12%  Similarity=0.231  Sum_probs=43.9

Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCCC--CCCcCEEEEEEEEeCCCceeecCcE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAPD--TITGDIVFILQLKEHPKFKRKFDDL  272 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~v~i~v~~~~~f~r~g~dL  272 (334)
                      .++|+||+|+++|++++|+|+|++..+  +..|||||+|+|..|..++.+..+|
T Consensus       121 ~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~  174 (181)
T 3agx_A          121 TIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTV  174 (181)
T ss_dssp             EEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHH
T ss_pred             EEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHH
Confidence            478889999999999999999999643  4579999999999888777665544

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.70  E-value=6.2e-09  Score=89.34  Aligned_cols=52  Identities=8%  Similarity=0.141  Sum_probs=43.7

Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCCC--CCCcCEEEEEEEEeCCCceeecCcE
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAPD--TITGDIVFILQLKEHPKFKRKFDDL  272 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~v~i~v~~~~~f~r~g~dL  272 (334)
                      .++|+||+|+++|++++|+|+|++..+  +..|||||+|+|..|..++.+..+|
T Consensus       121 ~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~  174 (180)
T 2q2g_A          121 NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKL  174 (180)
T ss_dssp             EEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHH
T ss_pred             EEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHH
Confidence            478889999999999999999998642  4579999999999888777665444

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.67  E-value=4.1e-09  Score=89.62  Aligned_cols=51  Identities=14%  Similarity=0.232  Sum_probs=42.8

Q ss_pred             EEEEEeccCccCCcEEEEecCcCCCCC--CCCcCEEEEEEEEeCCCceeecCc
Q 019908          221 VLEVHVEKGMQHGQKIAFEGQADEAPD--TITGDIVFILQLKEHPKFKRKFDD  271 (334)
Q Consensus       221 ~~~v~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~v~i~v~~~~~f~r~g~d  271 (334)
                      .++|+||+|+++|++++|+|+|++..+  +..|||||+|+|..|+.++.++.+
T Consensus       115 ~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~  167 (170)
T 1c3g_A          115 TLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKR  167 (170)
T ss_dssp             EEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHH
T ss_pred             EEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence            478889999999999999999998643  357999999999988877665543

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.59  E-value=1.2e-08  Score=95.48  Aligned_cols=53  Identities=25%  Similarity=0.390  Sum_probs=45.7

Q ss_pred             EEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCCCceeecCcEEEE
Q 019908          222 LEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD  275 (334)
Q Consensus       222 ~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  275 (334)
                      ++|+||+|+++|++++|+|+|++.. +..|||||+|+|.-|+.+..+...|+.+
T Consensus       260 v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~~~V~~P~~l~~~q~~~l~~  312 (329)
T 3lz8_A          260 ILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAVIKIVMPTKPDEKARELWQQ  312 (329)
T ss_dssp             EEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred             EEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            6899999999999999999999965 5689999999999988887766665543

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.18  E-value=4.2e-07  Score=70.74  Aligned_cols=58  Identities=29%  Similarity=0.584  Sum_probs=42.6

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccC------CcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEc
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVIS  202 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~  202 (334)
                      +.+.|.... .-.....|+.|+|+|....      ...+|+.|+|+|+++.             .+|+.|+|.|++..
T Consensus        32 ~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~-------------~~C~~C~G~G~v~~   95 (104)
T 2ctt_A           32 ERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII-------------SPCVVCRGAGQAKQ   95 (104)
T ss_dssp             SSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS-------------SCCSSSSSCSEECC
T ss_pred             CCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC-------------CcCCCCCCeeEEEE
Confidence            445565543 2234578999999996531      2357999999998764             79999999998764

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=98.08  E-value=7.6e-07  Score=65.60  Aligned_cols=57  Identities=33%  Similarity=0.703  Sum_probs=42.0

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccCC------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGA------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      +.+.|.... ......+|+.|+|+|.....      ..+|+.|+|+|.++.             .+|+.|+|.|++.
T Consensus        15 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~G~~~   77 (79)
T 1exk_A           15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK-------------DPCNKCHGHGRVE   77 (79)
T ss_dssp             GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS-------------SBCGGGTTSSEEE
T ss_pred             CCCcccccC-CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECC-------------CcCCCCCCeEEEe
Confidence            345565543 23345689999999976421      257999999998653             7999999999875

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.79  E-value=5.1e-06  Score=56.16  Aligned_cols=32  Identities=28%  Similarity=0.837  Sum_probs=23.5

Q ss_pred             EEEEeCCCCccceEEEccCCCCCccCCCceeEEe
Q 019908          186 QMQHVCPECRGAGEVISERDKCPQCKANKVTQEK  219 (334)
Q Consensus       186 ~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~  219 (334)
                      +++.+|+.|+|+|.++.  ++|+.|+|.|++.+.
T Consensus         7 q~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~   38 (53)
T 3lcz_A            7 DLETTCPNCNGSGREEP--EPCPKCLGKGVILTA   38 (53)
T ss_dssp             HHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred             ceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence            34577888888887775  788888888877653

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=97.35  E-value=6.1e-05  Score=50.82  Aligned_cols=25  Identities=36%  Similarity=0.985  Sum_probs=12.7

Q ss_pred             eeCCCCCCCCCccCCcccCCCCCCCcE
Q 019908          146 ILCPKCKGKGSKSGALGKCYGCQGTGM  172 (334)
Q Consensus       146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~  172 (334)
                      .+|+.|+|+|....  .+|+.|+|+|.
T Consensus        10 ~~C~~C~GsG~~i~--~~C~~C~G~G~   34 (53)
T 3lcz_A           10 TTCPNCNGSGREEP--EPCPKCLGKGV   34 (53)
T ss_dssp             EECTTTTTSCEETT--EECTTTTTSSE
T ss_pred             ccCcCCcccccCCC--CcCCCCCCcEE
Confidence            45666666555432  34555555554

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=97.25  E-value=9.3e-05  Score=49.94  Aligned_cols=27  Identities=37%  Similarity=1.005  Sum_probs=15.7

Q ss_pred             eeCCCCCCCCCccCCcccCCCCCCCcEEE
Q 019908          146 ILCPKCKGKGSKSGALGKCYGCQGTGMKI  174 (334)
Q Consensus       146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~  174 (334)
                      ..|+.|+|+|....  .+|+.|+|+|.++
T Consensus        10 ~~C~~C~GsG~~~~--~~C~~C~G~G~v~   36 (53)
T 2bx9_A           10 VACPKCERAGEIEG--TPCPACSGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEETT--EECTTTTTSSEEE
T ss_pred             ccCCCCcceeccCC--CCCccCCCCccEE
Confidence            45666666666532  3566666666544

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=96.93  E-value=0.00041  Score=46.75  Aligned_cols=27  Identities=30%  Similarity=0.743  Sum_probs=15.6

Q ss_pred             ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          162 GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       162 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      .+|+.|+|+|.++.             .+|+.|+|.|+++
T Consensus        10 ~~C~~C~GsG~~~~-------------~~C~~C~G~G~v~   36 (53)
T 2bx9_A           10 VACPKCERAGEIEG-------------TPCPACSGKGVIL   36 (53)
T ss_dssp             EECTTTTTSSEETT-------------EECTTTTTSSEEE
T ss_pred             ccCCCCcceeccCC-------------CCCccCCCCccEE
Confidence            35666666665431             4566666666554

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=96.76  E-value=0.00021  Score=72.19  Aligned_cols=50  Identities=14%  Similarity=0.245  Sum_probs=45.0

Q ss_pred             EEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCC----cccCCCCCCCc
Q 019908          122 VHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA----LGKCYGCQGTG  171 (334)
Q Consensus       122 ~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~----~~~C~~C~G~G  171 (334)
                      .+.++++|+|+..|..+++.+.+...|..|+|+|...+.    ..+|+.|+|+.
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~  221 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSK  221 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTT
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCc
Confidence            357889999999999999999999999999999998875    46899999994

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=91.19  E-value=0.12  Score=52.44  Aligned_cols=48  Identities=17%  Similarity=0.180  Sum_probs=38.6

Q ss_pred             CccccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhc
Q 019908           10 NNTKYYEILGVSKSATE--DELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVL   61 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a~~--~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L   61 (334)
                      ...+||++||++.++..  .+|++|||++|+..+++    .+++..+..|+.|=
T Consensus       627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----~~r~~lvd~a~~vr  676 (681)
T 2pzi_A          627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----RHRYTLVDMANKVR  676 (681)
T ss_dssp             CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----HHHHHHHHHHHHHC
T ss_pred             cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----HHHHHHHHHhcccC
Confidence            45569999999777765  77999999999975554    37899999998873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	334
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	5e-22
d1nlta3	74	g.54.1.1 (A:139-212) Mitochondrial protein import	3e-21
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	6e-20
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	9e-20
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-18
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-18
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	4e-17
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	1e-16
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	8e-16
d1exka_	79	g.54.1.1 (A:) Cysteine-rich domain of the chaperon	5e-12
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	4e-11
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	2e-04
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	2e-09
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	9e-09
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	3e-06
d1m1qa_	90	a.138.1.3 (A:) Flavocytochrome c3 (respiratory fum	4e-06

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 85.8 bits (212), Expect = 5e-22
 Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 4/71 (5%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDI 69
          YYEILGVSK+A E E++KAY++ AMK HPD+         KFKE+ +AYEVL+D +KR  
Sbjct: 5  YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAA 64

Query: 70 YDQYGEDALKE 80
          YDQYG  A ++
Sbjct: 65 YDQYGHAAFEQ 75

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.0 bits (207), Expect = 3e-21
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 144 RNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISE 203
           + ILC +C+G+G K GA+ KC  C G G+K  TRQ+G  + Q+ Q  C  C G G++I  
Sbjct: 1   KQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMI-QRFQTECDVCHGTGDIIDP 59

Query: 204 RDKCPQCKANKVTQE 218
           +D+C  C   KV  E
Sbjct: 60  KDRCKSCNGKKVENE 74

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 6e-20
 Identities = 39/73 (53%), Positives = 59/73 (80%), Gaps = 4/73 (5%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIY 70
          YY+ LG+++ A+++E+K+AYR+ A++ HPDK  +P   EKFKE+ +AY+VLSDP KR+I+
Sbjct: 5  YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIF 64

Query: 71 DQYGEDALKEGMG 83
          D+YGE+ LK G G
Sbjct: 65 DRYGEEGLK-GSG 76

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 80.0 bits (197), Expect = 9e-20
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 4  RTPRRSNNTKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVL 61
          R   R++  +  E+L + +        +++AY++ ++  HPDKGG     +EL   +   
Sbjct: 3  RVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTF 62

Query: 62 SDPEKRDIYDQYG 74
                   +  G
Sbjct: 63 KTEVYNLRMNLGG 75

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 78.3 bits (192), Expect = 1e-18
 Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 12/106 (11%)

Query: 8   RSNNTKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPE 65
           R  + +  ++LG+ +SA      ++KAY K   + HPDKGGD EK K++   Y+ + D  
Sbjct: 4   REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV 63

Query: 66  KRDIYDQYGEDALKEGMGGAGAAH--------NPFDIF--ESFFGG 101
           K      +G       +   G           N  ++F  E     
Sbjct: 64  KYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSS 109

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 76.5 bits (188), Expect = 3e-18
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 14 YYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEK 66
           ++ +G++   T +++KK YRKA +  HPDK             F EL  A+    +  +
Sbjct: 35 KWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQ 94

Query: 67 RDIY 70
          + +Y
Sbjct: 95 KPLY 98

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.6 bits (180), Expect = 4e-17
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 10/71 (14%)

Query: 14 YYEILGVSKSATEDELKKAYRKAA-----MKNHPDKGGDPE-----KFKELGQAYEVLSD 63
          +Y ILG   SA   +LK+ Y+K        K   D           KF E+ QA+++L +
Sbjct: 18 WYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGN 77

Query: 64 PEKRDIYDQYG 74
           E +  YD   
Sbjct: 78 EETKKKYDLQR 88

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 1e-16
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 6  PRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEV 60
          PR S   +   ++  +    E E KK  R+  +K HPDK  +      E FK L      
Sbjct: 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINR 69

Query: 61 LSDPEKRDIYDQYGEDALKE 80
          L   EK+   DQ  + A + 
Sbjct: 70 L---EKQAFLDQNADRASRR 86

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 69.3 bits (169), Expect = 8e-16
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 11/69 (15%)

Query: 14 YYEILGVSKSATED--ELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLS 62
          Y+ + G+      D   L   ++    + HPDK             ++   + QA++ L 
Sbjct: 3  YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62

Query: 63 DPEKRDIYD 71
           P  R  Y 
Sbjct: 63 HPLMRAEYL 71

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]} Length = 79

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

 Score = 58.6 bits (141), Expect = 5e-12
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 135 GTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPEC 194
           G TK++ +     C  C G G+K G   +       G      + G   +QQ    CP C
Sbjct: 1   GVTKEIRIPTLEECDVCHGSGAKPGTQPQT-CPTCHGSGQVQMRQGFFAVQQ---TCPHC 56

Query: 195 RGAGEVISERDKCPQCKANKVTQE 218
           +G G +I   D C +C  +   + 
Sbjct: 57  QGRGTLIK--DPCNKCHGHGRVER 78

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (136), Expect = 4e-11
 Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 20/93 (21%)

Query: 172 MKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQ 231
           + ++   + +G  +  +       GA E                   K  +++ ++ G +
Sbjct: 7   LPVSLEDLFVGKKKSFKIGRKGPHGASE-------------------KTQIDIQLKPGWK 47

Query: 232 HGQKIAFEGQADEAPDT-ITGDIVFILQLKEHP 263
            G KI ++ Q D  P T     + F++Q K HP
Sbjct: 48  AGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP 80

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (86), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 4/39 (10%)

Query: 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK 157
           E V   L VSLEDL+ G  K   + R        G   K
Sbjct: 1   ETVQVNLPVSLEDLFVGKKKSFKIGR----KGPHGASEK 35

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.3 bits (122), Expect = 2e-09
 Identities = 27/54 (50%), Positives = 40/54 (74%)

Query: 209 QCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEH 262
           + +  K+   +K+LEVHVE GM+ GQ+I F+G+AD+APD I GD+VFI+  + H
Sbjct: 20  KGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPH 73

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (118), Expect = 9e-09
 Identities = 21/51 (41%), Positives = 29/51 (56%)

Query: 265 FKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF 315
           FKR  DDL  +  + L  A+ G +FAL H+ G  L +   PGE+I PG+  
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRK 52

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.6 bits (100), Expect = 3e-06
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 265 FKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNP 305
           FKR  DDL     LS  E+L GF   +  +DGR L +    
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQ 42

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]} Length = 90

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

 Score = 42.5 bits (99), Expect = 4e-06
 Identities = 11/78 (14%), Positives = 17/78 (21%), Gaps = 7/78 (8%)

Query: 148 CPKCKGKGSKSGALG----KCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISE 203
           C  C   G+ S        +C  C G   ++                C            
Sbjct: 14  CESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCAD-CHAVHDMNVGQK- 71

Query: 204 RDKCPQCKANKVTQEKKV 221
              C  C  +  T    +
Sbjct: 72  -PTCESCHDDGRTSASVL 88

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	334
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.89
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.83
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.8
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.78
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.67
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.66
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.66
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	99.66
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.66
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.64
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.63
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.63
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	99.55
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.01
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.86
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	98.69
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	98.24
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.79
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	97.68
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	95.8
d1m1qa_	90	Flavocytochrome c3 (respiratory fumarate reductase	88.74

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.9e-24  Score=158.09  Aligned_cols=68  Identities=57%  Similarity=0.964  Sum_probs=63.5

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----HHHHHHHHHHhhcCCCcccchhcccChhhh
Q 019908           11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDAL   78 (334)
Q Consensus        11 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~   78 (334)
                      .+|||+||||+++||.+|||+|||+++++||||+++++    +.|++|++||+||+||.+|+.||+||..++
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~   73 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCcccc
Confidence            57999999999999999999999999999999998753    689999999999999999999999997654

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4.9e-23  Score=151.43  Aligned_cols=68  Identities=54%  Similarity=1.105  Sum_probs=64.7

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHhhcCCCcccchhcccChhhhh
Q 019908           12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALK   79 (334)
Q Consensus        12 ~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~---~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~   79 (334)
                      +|||+||||+++||.+||++|||++++++|||+++++   ++|+.|++||++|+||.+|+.||+||+++++
T Consensus         3 kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~   73 (77)
T d1hdja_           3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK   73 (77)
T ss_dssp             CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred             CChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhc
Confidence            6899999999999999999999999999999998875   7899999999999999999999999998874

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.83  E-value=1.3e-22  Score=160.37  Aligned_cols=68  Identities=32%  Similarity=0.509  Sum_probs=63.7

Q ss_pred             CccccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccChhh
Q 019908           10 NNTKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDA   77 (334)
Q Consensus        10 ~~~~~y~iLgv~~~a--~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~   77 (334)
                      +..+||+||||+++|  +.++||+|||+||++||||+++++++|++|++||+||+|+.+|+.||.++...
T Consensus         6 ~~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           6 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            457899999999999  78899999999999999999999999999999999999999999999987643

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=6.4e-21  Score=145.11  Aligned_cols=66  Identities=35%  Similarity=0.606  Sum_probs=60.5

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----------HHHHHHHHHHhhcCCCcccchhcccC
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----------EKFKELGQAYEVLSDPEKRDIYDQYG   74 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~----------~~f~~i~~Ay~~L~d~~~r~~YD~~G   74 (334)
                      ...+|||+||||+++|+.+|||+||++|+++||||+++..          ++|+.|++||++|+||.+|+.||...
T Consensus        13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            4568999999999999999999999999999999998642          67999999999999999999999854

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.78  E-value=1.2e-20  Score=138.26  Aligned_cols=67  Identities=21%  Similarity=0.399  Sum_probs=62.6

Q ss_pred             CCCccccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHhhcCCCcccchhcccC
Q 019908            8 RSNNTKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYG   74 (334)
Q Consensus         8 ~~~~~~~y~iLgv~~~a--~~~eik~ayr~la~~~hPd~~~~~~~f~~i~~Ay~~L~d~~~r~~YD~~G   74 (334)
                      ..+..+||+||||++++  +.++||+|||+++++||||+++++++|++||+||++|+|+.+|..||..+
T Consensus         7 ~~~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_           7 RADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            44678999999999998  89999999999999999999999999999999999999999999999843

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.67  E-value=2.5e-17  Score=121.39  Aligned_cols=69  Identities=33%  Similarity=0.378  Sum_probs=61.9

Q ss_pred             CceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc----------CCCCCccEEEEEEEEEe
Q 019908          264 KFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF----------DNFTSVNLYLHEYCFLW  332 (334)
Q Consensus       264 ~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~----------~~~~~GdL~v~~~V~~p  332 (334)
                      .|+|+|+||+++++|++.||++|++++|+|+||+.+.|+|+++..+++|...          +.+.+|||||+|+|++|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999999999999988777777543          33568999999999999

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=9.4e-18  Score=125.29  Aligned_cols=68  Identities=31%  Similarity=0.381  Sum_probs=59.2

Q ss_pred             CCCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----HHHHHHHHHHhhcCCCcccchhcccCh
Q 019908            5 TPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGE   75 (334)
Q Consensus         5 ~~~~~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-----~~f~~i~~Ay~~L~d~~~r~~YD~~G~   75 (334)
                      .++...-+++|+||+|+++||.+|||+|||+|+++||||++++.     ++|++|++||++|+   +++.||++..
T Consensus         9 ~~r~~~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~   81 (88)
T d1iura_           9 VPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNAD   81 (88)
T ss_dssp             CCSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSS
T ss_pred             ccchhHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccch
Confidence            35556678999999999999999999999999999999999863     68999999999996   5677777554

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=7.3e-17  Score=117.00  Aligned_cols=73  Identities=53%  Similarity=0.975  Sum_probs=65.7

Q ss_pred             cccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCc
Q 019908          116 KQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECR  195 (334)
Q Consensus       116 ~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~  195 (334)
                      +++.|+.++|.+||+|+|.|+++++.+.                                                    
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~----------------------------------------------------   29 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALN----------------------------------------------------   29 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEE----------------------------------------------------
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeec----------------------------------------------------
Confidence            5688999999999999999998875432                                                    


Q ss_pred             cceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCCCCCcCEEEEEEEEeCC
Q 019908          196 GAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHP  263 (334)
Q Consensus       196 G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~  263 (334)
                                             .+.++|+||+|+++|++|+|+|+|++.+++.+|||+|+|++++|+
T Consensus        30 -----------------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          30 -----------------------RKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             -----------------------EEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCS
T ss_pred             -----------------------CccEEEEecccccCCeEEEecCCcCCCCCCCCCCEEEEEEecCCC
Confidence                                   356999999999999999999999999988899999999999995

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=8.2e-17  Score=116.59  Aligned_cols=74  Identities=45%  Similarity=1.010  Sum_probs=66.4

Q ss_pred             eeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeEE
Q 019908          144 RNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQE  218 (334)
Q Consensus       144 ~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~  218 (334)
                      |.+.|+.|+|+|.......+|+.|+|+|+++...+++++ ++++..+|+.|.|+|+++..+++|+.|+|++++++
T Consensus         1 r~v~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~-~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~E   74 (74)
T d1nlta3           1 KQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPM-IQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENE   74 (74)
T ss_dssp             EEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSE-EEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEEE
T ss_pred             CccCCcCCcccccCCCCCCCCCCCcceeeeeEEEEecCc-EEEEEEECccCccceEEeCCCCCCCCCCCeeEeCC
Confidence            568999999999988777789999999999999999984 55678999999999999887889999999998875

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=8.2e-18  Score=122.82  Aligned_cols=61  Identities=21%  Similarity=0.389  Sum_probs=54.3

Q ss_pred             cccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCh---------HHHHHHHHHHhhcCCCcccchhcc
Q 019908           12 TKYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ   72 (334)
Q Consensus        12 ~~~y~iLgv~~~a--~~~eik~ayr~la~~~hPd~~~~~---------~~f~~i~~Ay~~L~d~~~r~~YD~   72 (334)
                      .|||++|||++++  +.+|||+|||+++++||||+....         +.|+.|++||++|+||.+|+.|+.
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            3899999999865  589999999999999999996531         578999999999999999999975

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=9.9e-17  Score=120.80  Aligned_cols=68  Identities=28%  Similarity=0.335  Sum_probs=59.4

Q ss_pred             CceeecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc-----------CCCCCccEEEEEEEEEe
Q 019908          264 KFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF-----------DNFTSVNLYLHEYCFLW  332 (334)
Q Consensus       264 ~f~r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~-----------~~~~~GdL~v~~~V~~p  332 (334)
                      +|+|+|+||+++++||+.||++|+++.|+|+||+.+.|++|++  +++|...           .++.+|||||+|+|.+|
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~--~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P   78 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYP   78 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCC
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccc--cccccccccCCCCCCcCCCCCCcCCEEEEEEEEcC
Confidence            5999999999999999999999999999999999999999876  4555432           33568999999999999


Q ss_pred             e
Q 019908          333 L  333 (334)
Q Consensus       333 ~  333 (334)
                      -
T Consensus        79 ~   79 (90)
T d1c3ga2          79 I   79 (90)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.63  E-value=3.1e-17  Score=125.18  Aligned_cols=62  Identities=27%  Similarity=0.497  Sum_probs=56.6

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------HHHHHHHHHHhhcCCCcccchh
Q 019908            9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIY   70 (334)
Q Consensus         9 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~~f~~i~~Ay~~L~d~~~r~~Y   70 (334)
                      +...+.|++||+++.++.++||+|||+++++||||+++++       +.|+.|++||++|+||.+|+.|
T Consensus        30 ~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          30 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             CCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            3456789999999999999999999999999999987753       5899999999999999999988

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=1.3e-16  Score=117.51  Aligned_cols=79  Identities=35%  Similarity=0.608  Sum_probs=65.9

Q ss_pred             ccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccce
Q 019908          119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAG  198 (334)
Q Consensus       119 ~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G  198 (334)
                      +++.++|.+||||+|+|+++++.+.+.                                               .|.|.+
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~-----------------------------------------------~~~g~~   33 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRK-----------------------------------------------GPHGAS   33 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE-----------------------------------------------ETTTEE
T ss_pred             CCEEEEeEEEHHHHhCCCceEeeccee-----------------------------------------------cccCCC
Confidence            378999999999999999998876542                                               122222


Q ss_pred             EEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCCC-CCCcCEEEEEEEEeCC
Q 019908          199 EVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPD-TITGDIVFILQLKEHP  263 (334)
Q Consensus       199 ~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~  263 (334)
                                         +.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|++++||
T Consensus        34 -------------------~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          34 -------------------EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             -------------------EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             -------------------ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence                               356799999999999999999999998764 5789999999999997

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=3.2e-15  Score=109.49  Aligned_cols=77  Identities=31%  Similarity=0.767  Sum_probs=64.7

Q ss_pred             CcccccccceeeeCCCCCCCCCccCC-cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCC
Q 019908          135 GTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKAN  213 (334)
Q Consensus       135 G~~~~i~~~~~~~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~  213 (334)
                      |++++|.+++.+.|+.|+|+|...+. ..+|+.|+|+|++..  +.  +++ +++++|+.|+|+|+++.  ++|+.|+|+
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~--~~--g~~-~~~~~C~~C~G~G~~i~--~~C~~C~G~   73 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQM--RQ--GFF-AVQQTCPHCQGRGTLIK--DPCNKCHGH   73 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEE--EE--TTE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEE--ec--ccc-eeeEECcccCcceeECC--CCCCCCCCc
Confidence            67899999999999999999998765 467999999998643  22  333 34579999999999986  899999999


Q ss_pred             ceeEE
Q 019908          214 KVTQE  218 (334)
Q Consensus       214 g~~~~  218 (334)
                      |++++
T Consensus        74 G~v~k   78 (79)
T d1exka_          74 GRVER   78 (79)
T ss_dssp             SEEEC
T ss_pred             eEeec
Confidence            99875

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.01  E-value=3.1e-11  Score=90.10  Aligned_cols=82  Identities=17%  Similarity=0.320  Sum_probs=67.2

Q ss_pred             cccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCc
Q 019908          116 KQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECR  195 (334)
Q Consensus       116 ~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~  195 (334)
                      +.|.|+..+++++|.|++.|+++++...                                                    
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~----------------------------------------------------   31 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI----------------------------------------------------   31 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS----------------------------------------------------
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc----------------------------------------------------
Confidence            4678999999999999999998875422                                                    


Q ss_pred             cceEEEccCCCCCccCCCceeEEeEEEEEEeccCccCCcEEEEecCcCCCC--CCCCcCEEEEEEEEeCCCceeecCc
Q 019908          196 GAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAP--DTITGDIVFILQLKEHPKFKRKFDD  271 (334)
Q Consensus       196 G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G~~~G~~i~l~g~G~~~~--~~~~GDL~v~i~v~~~~~f~r~g~d  271 (334)
                                            ..+.++|+||+|+++|++++++|+|++..  .+..|||+|+|+|+.|+.++.+..+
T Consensus        32 ----------------------dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls~~qk~   87 (90)
T d1c3ga2          32 ----------------------DGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKR   87 (90)
T ss_dssp             ----------------------SSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHH
T ss_pred             ----------------------cccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCCHHHHH
Confidence                                  02358899999999999999999999853  3467999999999988777665443

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.86  E-value=1e-09  Score=79.75  Aligned_cols=74  Identities=20%  Similarity=0.333  Sum_probs=59.7

Q ss_pred             cccccEEEeeeeceeeeecCcccccccceeeeCCCCCCCCCccCCcccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCc
Q 019908          116 KQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECR  195 (334)
Q Consensus       116 ~~~~di~~~l~~sl~e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~  195 (334)
                      +.+.|+.++++++|.|++.|+++.+....                                                   
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~d---------------------------------------------------   32 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHVS---------------------------------------------------   32 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECSS---------------------------------------------------
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEecC---------------------------------------------------
Confidence            46789999999999999999887754320                                                   


Q ss_pred             cceEEEccCCCCCccCCCceeEEeEEEEEEeccC--ccCCcEEEEecCcCCCC-CCCCcCEEEEEEEEeCC
Q 019908          196 GAGEVISERDKCPQCKANKVTQEKKVLEVHVEKG--MQHGQKIAFEGQADEAP-DTITGDIVFILQLKEHP  263 (334)
Q Consensus       196 G~G~~~~~~~~C~~C~G~g~~~~~~~~~v~Ip~G--~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~  263 (334)
                                             ...++|+||++  +++|++++|+|+|++.. ++..|||+|+++|+-|+
T Consensus        33 -----------------------g~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~Pk   80 (80)
T d1nlta2          33 -----------------------GDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE   80 (80)
T ss_dssp             -----------------------SCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC
T ss_pred             -----------------------cceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcCC
Confidence                                   22467777776  99999999999999864 35689999999998653

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.69  E-value=6.9e-09  Score=74.08  Aligned_cols=61  Identities=18%  Similarity=0.185  Sum_probs=49.7

Q ss_pred             eecCcEEEEEecCHHHHhCCCeEEEecCCCCeEEEEcCCCceecCCccc---------CCCCCccEEEEEEEE
Q 019908          267 RKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGIYF---------DNFTSVNLYLHEYCF  330 (334)
Q Consensus       267 r~g~dL~~~~~I~l~~al~G~~~~i~tldG~~l~v~i~~g~~i~~g~~~---------~~~~~GdL~v~~~V~  330 (334)
                      |+|.|++++++|||.||++|.++.|.+ +.+.+.|+||+|  ++.|...         ..+.+|||+|++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~-~~~~~~i~Ip~G--~~~G~~ir~~g~G~~~~~~~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLAL-NRKILEVHVEPG--MKDGQRIVFKGEADQAPDVIPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEE-EEEEEEEEECTT--CCTTCEEEETTCSCCCTTCBCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceee-cCccEEEEeccc--ccCCeEEEecCCcCCCCCCCCCCEEEEEEec
Confidence            689999999999999999999999986 455799999998  4555432         223579999999873

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=98.24  E-value=1.1e-07  Score=68.57  Aligned_cols=58  Identities=33%  Similarity=0.674  Sum_probs=42.3

Q ss_pred             eeecCcccccccceeeeCCCCCCCCCccCC------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEc
Q 019908          131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGA------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVIS  202 (334)
Q Consensus       131 e~~~G~~~~i~~~~~~~C~~C~G~G~~~~~------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~  202 (334)
                      +.+.|....- -.....|+.|+|+|.....      ..+|+.|+|+|+++.             .+|+.|+|+|++..
T Consensus        15 ~~C~G~G~~~-g~~~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~-------------~~C~~C~G~G~v~k   78 (79)
T d1exka_          15 DVCHGSGAKP-GTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK-------------DPCNKCHGHGRVER   78 (79)
T ss_dssp             GGGTTTSBCS-SSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS-------------SBCGGGTTSSEEEC
T ss_pred             CCCcCcccCC-CccceeCCCccceeEEEEecccceeeEECcccCcceeECC-------------CCCCCCCCceEeec
Confidence            3455655442 2345679999999965321      257999999999764             78999999998863

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.79  E-value=1.4e-06  Score=61.69  Aligned_cols=56  Identities=29%  Similarity=0.510  Sum_probs=38.7

Q ss_pred             ecCcccccccceeeeCCCCCCCCCccCC----------cccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEE
Q 019908          133 YNGTTKKLSLSRNILCPKCKGKGSKSGA----------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI  201 (334)
Q Consensus       133 ~~G~~~~i~~~~~~~C~~C~G~G~~~~~----------~~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~  201 (334)
                      +.|...... . ..+|+.|+|+|.....          ..+|+.|+|+|+++.           ...+|+.|+|+|.+.
T Consensus         8 C~G~G~~~~-~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~-----------~~~~C~~C~G~g~v~   73 (74)
T d1nlta3           8 CEGRGGKKG-A-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID-----------PKDRCKSCNGKKVEN   73 (74)
T ss_dssp             TTTCSBSTT-T-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC-----------TTSBCSSSTTSCEEE
T ss_pred             CcccccCCC-C-CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeC-----------CCCCCCCCCCeeEeC
Confidence            445544322 2 3469999999975421          257999999998653           125899999999763

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.68  E-value=2.9e-05  Score=55.42  Aligned_cols=59  Identities=20%  Similarity=0.217  Sum_probs=43.8

Q ss_pred             CcEEEEEecCHHHHhCCCeEEEe----cCCCC----eEEEEcCCCceecCCccc----------CCCCCccEEEEEEEE
Q 019908          270 DDLYVDHTLSLTEALCGFQFALT----HLDGR----QLLIKSNPGEIIKPGIYF----------DNFTSVNLYLHEYCF  330 (334)
Q Consensus       270 ~dL~~~~~I~l~~al~G~~~~i~----tldG~----~l~v~i~~g~~i~~g~~~----------~~~~~GdL~v~~~V~  330 (334)
                      +++.+++.|||.||..|++..|.    ..+|.    .+.|.||||  ++.|...          ..+..|||+|.+++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G--~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNPQTGRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCSSSSCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCC--CCCCcEEEECCccccCcCCCCCCCEEEEEEeC
Confidence            47889999999999999987664    34543    478999998  4555432          123579999999874

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=95.80  E-value=5.4e-05  Score=55.05  Aligned_cols=68  Identities=16%  Similarity=0.311  Sum_probs=45.9

Q ss_pred             eCCCCCCCCCccCCc----ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEEEccCCCCCccCCCceeE
Q 019908          147 LCPKCKGKGSKSGAL----GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQ  217 (334)
Q Consensus       147 ~C~~C~G~G~~~~~~----~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~  217 (334)
                      .|..|+|.|......    ..|..|+|+|..........+.. ..-..|..|+|.++.+.  ..|..|++.+...
T Consensus        13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~-~~c~~CH~~H~~~~~~~--~~C~~CH~~gr~~   84 (90)
T d1m1qa_          13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGN-LVCADCHAVHDMNVGQK--PTCESCHDDGRTS   84 (90)
T ss_dssp             CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTT-CCGGGTCCTTTSBTTCC--CCSTTTCSSCCCH
T ss_pred             CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCc-cccccCccccCCCCcCC--CccccccCCCccc
Confidence            599999988654332    46999999987543222222111 12368888888887665  8899999987643

>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}

class: All alpha proteins
fold: Multiheme cytochromes
superfamily: Multiheme cytochromes
family: Di-heme elbow motif
domain: Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain
species: Shewanella oneidensis [TaxId: 70863]

Probab=88.74  E-value=0.015  Score=41.33  Aligned_cols=42  Identities=24%  Similarity=0.586  Sum_probs=29.2

Q ss_pred             eeCCCCCCCCCccCCc----------ccCCCCCCCcEEEEEEeeccceeeEEEEeCCCCccceEE
Q 019908          146 ILCPKCKGKGSKSGAL----------GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV  200 (334)
Q Consensus       146 ~~C~~C~G~G~~~~~~----------~~C~~C~G~G~~~~~~~~~~g~~~~~~~~C~~C~G~G~~  200 (334)
                      ..|..|+|++......          ..|..|+|.|..+             ...|..|++.|+.
T Consensus        32 ~~C~~CHg~~~~~~~~~~~h~~~~~c~~CH~~H~~~~~~-------------~~~C~~CH~~gr~   83 (90)
T d1m1qa_          32 AQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQ-------------KPTCESCHDDGRT   83 (90)
T ss_dssp             HHHHHHHCCGGGSCTTTGGGTTTCCGGGTCCTTTSBTTC-------------CCCSTTTCSSCCC
T ss_pred             CcCcccCCCceeEeeccccccCccccccCccccCCCCcC-------------CCccccccCCCcc
Confidence            4699999888643211          4577777877533             2689999998864