Citrus Sinensis ID: 019965

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHADLSIYKK
ccccccccccccccccccEEccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEcccccccccccccccccccccccccccEEEEccccccEEEEEccccccccEEEcccccccEEEEHHHHHHHHHccccccccccccccccccEEEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHcHHHHcc
ccccccccccccccccccEEEcccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccEEEEccccccccEccccHHEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccHEEEEcccccccccccEEEccccccccccEEEEEccccccEEEEEcccccccEEEEEccccccEEEEccHHHHHHHcccEccEEEEEEEcccccEEEEEEcccccccEEcccHHHcccccccccccccHHHHHHHHHHccHHHHHHHcc
menyeqskigskahTVLHcidlsspdihqSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSkrffnlplNEKIKVLRnekhrgytplhdelldpdtqvhgdykegyyigvevpegdpesekpfygpnvwpapdilpgwrETMDRFHQEALEVAKVVARIIALALDlnadffdkpeilgepiATLRLLhyegqtsdpskgiygagahsdfGLITLLATDEVlglqickdkdakpqiweyvpplkgaFIVNLGDMLERWsncvfkstlHRVLGNGRERYSIAYfvepshdcvveclptckseknppkfppvkygsylsqrykdthadlsiykk
menyeqskigskaHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHrgytplhdelldpdtqvHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPtckseknppkfppvkygsylsqrykdthadlsiykk
MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHADLSIYKK
************AHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEV*********PFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCK************Y**Y*****************
******************CIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHD**********GDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSD******GAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHA*L**Y**
MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHADLSIYKK
******SKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHADLSIY**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHADLSIYKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query333 2.2.26 [Sep-21-2011]
Q54RA4363 Probable iron/ascorbate o yes no 0.741 0.680 0.320 7e-33
A6BM06368 1-aminocyclopropane-1-car N/A no 0.813 0.736 0.304 5e-30
Q76NT9368 1-aminocyclopropane-1-car no no 0.813 0.736 0.304 5e-30
P40902397 Sexual differentiation pr yes no 0.786 0.659 0.290 2e-26
Q7LL04321 UPF0676 protein C1494.01 no no 0.864 0.897 0.325 4e-26
Q9LHN8361 Feruloyl CoA ortho-hydrox no no 0.864 0.797 0.284 6e-26
Q40062339 2'-deoxymugineic-acid 2'- N/A no 0.858 0.843 0.281 1e-24
O49561338 Gibberellin 2-beta-dioxyg no no 0.747 0.736 0.300 2e-24
A2A1A0352 S-norcoclaurine synthase N/A no 0.753 0.713 0.311 2e-23
Q96330336 Flavonol synthase/flavano no no 0.807 0.800 0.291 6e-23
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1 Back     alignment and function desciption
 Score =  141 bits (355), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 156/284 (54%), Gaps = 37/284 (13%)

Query: 34  LKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKV---LRNEKHRGYTPLH 90
           ++ AC + GFFY+  HGI QE +D +   SK+FF+L  + K+K    L  +  RGY  + 
Sbjct: 38  IENACKNFGFFYIKGHGIDQELIDRLERLSKKFFSLDQSIKMKYRMELAQKAWRGYFVVG 97

Query: 91  DELLDPDTQVHGDYKEGYYIGVEVPEGDPE--SEKPFYGPNVWPAP------DILPGWRE 142
            EL    T    D+KEG Y+G E+ +  P   ++ P +G N++P        DI+ G+++
Sbjct: 98  GEL----TSGLKDWKEGLYLGTELNDDHPLVIAQTPLHGLNLFPTLEEEIEYDIV-GFKD 152

Query: 143 TMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHY----------- 191
           T+  +  +  ++   +  +IA++L+L+AD+F       +P+   R+ +Y           
Sbjct: 153 TILTYIDKVTKLGHSLMELIAISLNLSADYF-SSRYTKDPLILYRIFNYPSIISSGDDNK 211

Query: 192 -EGQTSDPSKGI-YGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFI 249
             G++SD +  + +G G H+D+G++T+L  D+V GLQ+          W   PP+KG F+
Sbjct: 212 TTGESSDDNDKVEWGVGEHTDYGVLTILYQDDVGGLQVHSKNG-----WISAPPIKGTFV 266

Query: 250 VNLGDMLERWSNCVFKSTLHRVLGN--GRERYSIAYFVEPSHDC 291
            N+GDML+R +  +++ST HRV  N  GR+R S   F +P+ + 
Sbjct: 267 CNIGDMLDRMTGGLYRSTPHRVELNRSGRDRISFPLFFDPNFNS 310

Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|A6BM06|ACCO1_DICMU 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1 Back     alignment and function description
>sp|Q76NT9|ACCO1_DICDI 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1 Back     alignment and function description
>sp|P40902|ISP7_SCHPO Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp7 PE=2 SV=1 Back     alignment and function description
>sp|Q7LL04|YQK1_SCHPO UPF0676 protein C1494.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1494.01 PE=3 SV=2 Back     alignment and function description
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function description
>sp|Q40062|IDS3_HORVU 2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3 Back     alignment and function description
>sp|O49561|G2OX8_ARATH Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query333
225445104358 PREDICTED: probable iron/ascorbate oxido 0.981 0.913 0.831 1e-162
297738763330 unnamed protein product [Vitis vinifera] 0.981 0.990 0.831 1e-162
225445102364 PREDICTED: probable iron/ascorbate oxido 0.981 0.898 0.817 1e-161
224143624336 predicted protein [Populus trichocarpa] 0.957 0.949 0.818 1e-159
255546339340 Hyoscyamine 6-dioxygenase, putative [Ric 1.0 0.979 0.774 1e-158
255636224331 unknown [Glycine max] 0.981 0.987 0.785 1e-155
356495885331 PREDICTED: probable iron/ascorbate oxido 0.981 0.987 0.782 1e-154
388522983340 unknown [Medicago truncatula] 0.957 0.938 0.799 1e-153
255641899331 unknown [Glycine max] 0.969 0.975 0.783 1e-151
223944829329 unknown [Zea mays] gi|413947624|gb|AFW80 0.957 0.969 0.755 1e-148
>gi|225445104|ref|XP_002283713.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 277/333 (83%), Positives = 303/333 (90%), Gaps = 6/333 (1%)

Query: 1   MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVF 60
           MEN  QS       +VL+CIDLSSPDIH+SVSLLKQACLD GFFYVINHGISQEFMDEVF
Sbjct: 29  MENRGQS------FSVLNCIDLSSPDIHKSVSLLKQACLDSGFFYVINHGISQEFMDEVF 82

Query: 61  TQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPE 120
            QSKRFF LPL+EK+K LRNEKHRGYTP+ DE+LDP+ QV+GDYKEGYYIGVEVPE DP+
Sbjct: 83  AQSKRFFTLPLSEKMKHLRNEKHRGYTPVLDEVLDPENQVNGDYKEGYYIGVEVPEHDPK 142

Query: 121 SEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILG 180
           SEKPFYGPNVWPA D LP WR+TM++FHQEALEVAK VARIIALALDL  DFFDKPE+LG
Sbjct: 143 SEKPFYGPNVWPAADRLPEWRQTMEKFHQEALEVAKAVARIIALALDLERDFFDKPEMLG 202

Query: 181 EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEY 240
           +PIATLRLLHYEGQ SDP KGIYGAGAHSD+GLITLLATD+VLGLQICKDKDA+PQ WEY
Sbjct: 203 DPIATLRLLHYEGQISDPLKGIYGAGAHSDYGLITLLATDDVLGLQICKDKDARPQTWEY 262

Query: 241 VPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCK 300
           V PLKGAFIVNLGDMLERWSNC+FKSTLHRVL +G ERYSIAYFVEPSHDC+VECLPTCK
Sbjct: 263 VAPLKGAFIVNLGDMLERWSNCIFKSTLHRVLVHGPERYSIAYFVEPSHDCLVECLPTCK 322

Query: 301 SEKNPPKFPPVKYGSYLSQRYKDTHADLSIYKK 333
           S+KNPPKFPPVK G+YL+QRYKDTHADL++Y K
Sbjct: 323 SDKNPPKFPPVKCGTYLTQRYKDTHADLNLYTK 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297738763|emb|CBI28008.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225445102|ref|XP_002283708.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224143624|ref|XP_002325020.1| predicted protein [Populus trichocarpa] gi|222866454|gb|EEF03585.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255546339|ref|XP_002514229.1| Hyoscyamine 6-dioxygenase, putative [Ricinus communis] gi|223546685|gb|EEF48183.1| Hyoscyamine 6-dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255636224|gb|ACU18453.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356495885|ref|XP_003516801.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Glycine max] Back     alignment and taxonomy information
>gi|388522983|gb|AFK49553.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255641899|gb|ACU21218.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|223944829|gb|ACN26498.1| unknown [Zea mays] gi|413947624|gb|AFW80273.1| hypothetical protein ZEAMMB73_441487 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query333
TAIR|locus:2203325329 AT1G35190 [Arabidopsis thalian 0.975 0.987 0.706 6.2e-133
TAIR|locus:2075125330 AT3G46490 [Arabidopsis thalian 0.981 0.990 0.652 2.4e-122
TAIR|locus:2078241286 AT3G46480 [Arabidopsis thalian 0.591 0.688 0.686 6e-99
TAIR|locus:2075130251 AT3G46500 [Arabidopsis thalian 0.753 1.0 0.621 4.8e-94
TAIR|locus:504955434247 AT4G16765 [Arabidopsis thalian 0.708 0.955 0.504 7.6e-64
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.885 0.845 0.398 2.8e-50
UNIPROTKB|G4NB73346 MGG_00611 "2OG-Fe(II) oxygenas 0.765 0.736 0.366 3.6e-41
TIGR_CMR|SPO_2669317 SPO_2669 "oxidoreductase, 2OG- 0.777 0.817 0.368 1.7e-36
POMBASE|SPAC25B8.13c397 isp7 "2-OG-Fe(II) oxygenase su 0.567 0.476 0.336 7.2e-36
ASPGD|ASPL0000060477332 AN0526 [Emericella nidulans (t 0.747 0.75 0.352 9.2e-36
TAIR|locus:2203325 AT1G35190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
 Identities = 234/331 (70%), Positives = 283/331 (85%)

Query:     1 MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVF 60
             MEN+   K+ S     L+CIDL++ D++ SV  LKQACLDCGFFYVINHGIS+EFMD+VF
Sbjct:     1 MENHTTMKVSS-----LNCIDLANDDLNHSVVSLKQACLDCGFFYVINHGISEEFMDDVF 55

Query:    61 TQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPE 120
              QSK+ F LPL EK+KVLRNEKHRGYTP+ DELLDP  Q++GD+KEGYYIG+EVP+ DP 
Sbjct:    56 EQSKKLFALPLEEKMKVLRNEKHRGYTPVLDELLDPKNQINGDHKEGYYIGIEVPKDDPH 115

Query:   121 SEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILG 180
              +KPFYGPN WP  D+LPGWRETM+++HQEAL V+  +AR++ALALDL+  +FD+ E+LG
Sbjct:   116 WDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIARLLALALDLDVGYFDRTEMLG 175

Query:   181 EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEY 240
             +PIAT+RLL Y+G  SDPSKGIY  GAHSDFG++TLLATD V+GLQICKDK+A PQ WEY
Sbjct:   176 KPIATMRLLRYQG-ISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEY 234

Query:   241 VPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCK 300
             VPP+KGAFIVNLGDMLERWSN  FKSTLHRVLGNG+ERYSI +FVEP+HDC+VECLPTCK
Sbjct:   235 VPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCK 294

Query:   301 SEKNPPKFPPVKYGSYLSQRYKDTHADLSIY 331
             SE   PK+PP+K  +YL+QRY++THA+LSIY
Sbjct:   295 SESELPKYPPIKCSTYLTQRYEETHANLSIY 325
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0009821 "alkaloid biosynthetic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2075125 AT3G46490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078241 AT3G46480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075130 AT3G46500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955434 AT4G16765 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4NB73 MGG_00611 "2OG-Fe(II) oxygenase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2669 SPO_2669 "oxidoreductase, 2OG-Fe(II) oxygenase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
POMBASE|SPAC25B8.13c isp7 "2-OG-Fe(II) oxygenase superfamily protein" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000060477 AN0526 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.691
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query333
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-179
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-86
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-82
PLN02485329 PLN02485, PLN02485, oxidoreductase 7e-58
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 1e-39
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 4e-38
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 3e-34
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-33
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 4e-33
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-30
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-29
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-29
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-28
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-27
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-26
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-25
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-24
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 4e-24
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-23
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 7e-23
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 3e-21
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-20
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-19
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 5e-19
PLN02904357 PLN02904, PLN02904, oxidoreductase 6e-19
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 4e-18
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 4e-16
PLN02947374 PLN02947, PLN02947, oxidoreductase 5e-07
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-06
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 3e-04
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  498 bits (1283), Expect = e-179
 Identities = 231/333 (69%), Positives = 286/333 (85%), Gaps = 3/333 (0%)

Query: 1   MENYEQSKIGSKAHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVF 60
           MEN+  +K  +   + L+CIDL++ D++ SV+ LKQACLDCGFFYVINHGI++EFMD+VF
Sbjct: 1   MENH--TKDSTMKVSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVF 58

Query: 61  TQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPE 120
            QSK+FF LPL EK+KVLRNEKHRGYTP+ DE LDP  Q++GD+KEGYYIG+EVP+ DP 
Sbjct: 59  EQSKKFFALPLEEKMKVLRNEKHRGYTPVLDEKLDPKNQINGDHKEGYYIGIEVPKDDPH 118

Query: 121 SEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILG 180
            +KPFYGPN WP  D+LPGWRETM+++HQEAL V+  +A+++ALALDL+  +FD+ E+LG
Sbjct: 119 WDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGYFDRTEMLG 178

Query: 181 EPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEY 240
           +PIAT+RLL Y+G  SDPSKGIY  GAHSDFG++TLLATD V+GLQICKDK+A PQ WEY
Sbjct: 179 KPIATMRLLRYQG-ISDPSKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEY 237

Query: 241 VPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCK 300
           VPP+KGAFIVNLGDMLERWSN  FKSTLHRVLGNG+ERYSI +FVEP+HDC+VECLPTCK
Sbjct: 238 VPPIKGAFIVNLGDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCK 297

Query: 301 SEKNPPKFPPVKYGSYLSQRYKDTHADLSIYKK 333
           SE + PK+PP+K  +YL+QRY++THA LSIY +
Sbjct: 298 SESDLPKYPPIKCSTYLTQRYEETHAKLSIYHQ 330

Length = 332
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 333
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02947374 oxidoreductase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.93
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.72
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.14
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.38
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.23
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.06
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 87.62
TIGR02466201 conserved hypothetical protein. This family consis 87.3
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 86.29
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=7.4e-78  Score=561.04  Aligned_cols=320  Identities=70%  Similarity=1.280  Sum_probs=277.8

Q ss_pred             CCCcccEEeCCCcchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccCCCCCcccccCcc
Q 019965           13 AHTVLHCIDLSSPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNEKHRGYTPLHDE   92 (333)
Q Consensus        13 ~~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~GY~~~~~e   92 (333)
                      ...+||+|||+..++..++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++.....++||.+.+.+
T Consensus        11 ~~~~iP~IDl~~~~~~~~~~~l~~Ac~~~GFf~l~nHGI~~~l~~~~~~~~~~FF~LP~e~K~k~~~~~~~~GY~~~~~e   90 (332)
T PLN03002         11 KVSSLNCIDLANDDLNHSVASLKQACLDCGFFYVINHGINEEFMDDVFEQSKKFFALPLEEKMKVLRNEKHRGYTPVLDE   90 (332)
T ss_pred             CCCCCCEEeCCchhHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCCCcCccccc
Confidence            35689999998666777899999999999999999999999999999999999999999999998766668999988777


Q ss_pred             cccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 019965           93 LLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADF  172 (333)
Q Consensus        93 ~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~  172 (333)
                      ..+.......|++|.|+++...|.+++.....++++|.||+.+.+|+||+.+++|+++|.+++..||++|+++||+++++
T Consensus        91 ~~~~~~~~~~d~kE~f~~~~~~p~~~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~  170 (332)
T PLN03002         91 KLDPKNQINGDHKEGYYIGIEVPKDDPHWDKPFYGPNPWPDADVLPGWRETMEKYHQEALRVSMAIAKLLALALDLDVGY  170 (332)
T ss_pred             ccccccCCCCcceeeeEecccCCCCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence            65433222469999999986545444332233567899998644789999999999999999999999999999999999


Q ss_pred             cCCccccCccceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeCCCCceeEEeCCCCCCCCeEEecCCCCeEEEEc
Q 019965          173 FDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNL  252 (333)
Q Consensus       173 ~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~~~~~~~iVni  252 (333)
                      |.+......+.+.||++|||+++.. ....+|+++|||+|+||||+||+++||||+.++...+|+|++|+|.||++||||
T Consensus       171 f~~~~~~~~~~~~lrl~~YP~~~~~-~~~~~g~~~HTD~g~lTlL~qd~v~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNi  249 (332)
T PLN03002        171 FDRTEMLGKPIATMRLLRYQGISDP-SKGIYACGAHSDFGMMTLLATDGVMGLQICKDKNAMPQKWEYVPPIKGAFIVNL  249 (332)
T ss_pred             hccccccCCCchheeeeeCCCCCCc-ccCccccccccCCCeEEEEeeCCCCceEEecCCCCCCCcEEECCCCCCeEEEEH
Confidence            9821245566789999999998753 235799999999999999999999999998764212368999999999999999


Q ss_pred             chhhHHhhCCccccccceecCCCCCceeeEEeecCCCCceeecCCCccCCCCCCCCCCcCHHHHHHHHHHhhhccccccC
Q 019965          253 GDMLERWSNCVFKSTLHRVLGNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFPPVKYGSYLSQRYKDTHADLSIYK  332 (333)
Q Consensus       253 Gd~l~~~TnG~~ks~~HRV~~~~~~R~S~~~F~~p~~~~~i~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  332 (333)
                      ||+|++||||+|||++|||+.++.+|||++||++|+.|++|.|+++++++++|++|++++++||+..++...|..++.++
T Consensus       250 GD~L~~wTng~~kSt~HRVv~~~~~R~Sia~F~~p~~d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~~  329 (332)
T PLN03002        250 GDMLERWSNGFFKSTLHRVLGNGQERYSIPFFVEPNHDCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEETHAKLSIYH  329 (332)
T ss_pred             HHHHHHHhCCeeECcCCeecCCCCCeeEEEEEecCCCCeeEecCCcccCCCCcccCCCccHHHHHHHHHHHHhhhhcccc
Confidence            99999999999999999999877789999999999999999999999999999999999999999999999999887765


Q ss_pred             C
Q 019965          333 K  333 (333)
Q Consensus       333 ~  333 (333)
                      +
T Consensus       330 ~  330 (332)
T PLN03002        330 Q  330 (332)
T ss_pred             C
Confidence            3

>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query333
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 6e-25
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-17
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-17
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-16
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-15
1w9y_A319 The Structure Of Acc Oxidase Length = 319 3e-15
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 7e-15
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 7e-15
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure 
Iteration: 1

 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 21/289 (7%)
Query: 42  GFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLR-NEKHRGYTPLHDELLDPDTQV 100
           GF  + ++ + Q  +D     +K FF LP+  K +        RGY P   E        
Sbjct: 34  GFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFGVETAK--GAD 91
Query: 101 HGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVAR 160
           H D KE ++ G ++P G     +     NVWPA   +P ++  +   +         V  
Sbjct: 92  HYDLKEFWHXGRDLPPG--HRFRAHXADNVWPAE--IPAFKHDVSWLYNSLDGXGGKVLE 147
Query: 161 IIALALDLNADFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATD 220
            IA  L L  DFF KP +  +  + LRLLHY     D + G+  AGAH D   ITLL   
Sbjct: 148 AIATYLKLERDFF-KPTVQ-DGNSVLRLLHYPPIPKD-ATGVR-AGAHGDINTITLLLGA 203
Query: 221 EVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLG-----NG 275
           E  GL++  D+D +   W  + P  G  ++N+GD LER +N V  ST+HRV+       G
Sbjct: 204 EEGGLEVL-DRDGQ---WLPINPPPGCLVINIGDXLERLTNNVLPSTVHRVVNPPPERRG 259
Query: 276 RERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFP-PVKYGSYLSQRYKD 323
             RYS  +F+  + D  ++ L  C + +NP ++P  +    +L QR ++
Sbjct: 260 VPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query333
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-139
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 1e-129
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-119
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-107
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-69
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-66
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
 Score =  396 bits (1019), Expect = e-139
 Identities = 90/316 (28%), Positives = 141/316 (44%), Gaps = 23/316 (7%)

Query: 19  CIDLS--SPDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIK 76
            +  S  + D  +    L  +    GF  + ++ + Q  +D     +K FF LP+  K +
Sbjct: 9   PVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQ 68

Query: 77  VLR-NEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPD 135
                   RGY P   E        H D KE +++G ++P G     +     NVW  P 
Sbjct: 69  YAGVKGGARGYIPFGVETAKGAD--HYDLKEFWHMGRDLPPGHR--FRAHMADNVW--PA 122

Query: 136 ILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEGQT 195
            +P ++  +   +     +   V   IA  L L  DFF     + +  + LRLLHY    
Sbjct: 123 EIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK--PTVQDGNSVLRLLHYPPIP 180

Query: 196 SDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLGDM 255
            D       AGAH D   ITLL   E  GL++  D+D +   W  + P  G  ++N+GDM
Sbjct: 181 KDA--TGVRAGAHGDINTITLLLGAEEGGLEVL-DRDGQ---WLPINPPPGCLVINIGDM 234

Query: 256 LERWSNCVFKSTLHRVL-----GNGRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFP- 309
           LER +N V  ST+HRV+       G  RYS  +F+  + D  ++ L  C + +NP ++P 
Sbjct: 235 LERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPE 294

Query: 310 PVKYGSYLSQRYKDTH 325
            +    +L QR ++  
Sbjct: 295 SITADEFLQQRLREIK 310
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query333
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 95.77
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.02
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.29
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 90.18
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 90.14
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 87.87
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 86.77
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 84.38
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=1e-75  Score=543.08  Aligned_cols=297  Identities=30%  Similarity=0.504  Sum_probs=263.8

Q ss_pred             CCcccEEeCCC--cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccC-CCCCcccccC
Q 019965           14 HTVLHCIDLSS--PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRN-EKHRGYTPLH   90 (333)
Q Consensus        14 ~~~iPvIDl~~--~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~GY~~~~   90 (333)
                      ..+||||||+.  .++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++||++.+
T Consensus         4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g   83 (312)
T 3oox_A            4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG   83 (312)
T ss_dssp             CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred             CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence            46899999963  35778999999999999999999999999999999999999999999999998874 6689999988


Q ss_pred             cccccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 019965           91 DELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARIIALALDLNA  170 (333)
Q Consensus        91 ~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~  170 (333)
                      .|.....  ...|++|.|+++.+.+.+++.  .....+|.||+.  +|+||+.+++|+++|.+++.+|+++|+++||+++
T Consensus        84 ~e~~~~~--~~~D~kE~~~~~~~~~~~~~~--~~~~~~n~wP~~--~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~  157 (312)
T 3oox_A           84 VETAKGA--DHYDLKEFWHMGRDLPPGHRF--RAHMADNVWPAE--IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLER  157 (312)
T ss_dssp             CCCSTTS--CSCCCCEEEEECCCCCTTCGG--GGTSCCCCCCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred             ceecCCC--CCCCceeeeEeecCCCcCCcc--hhccCCCCCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCH
Confidence            8866432  457999999997543333221  123567999987  7999999999999999999999999999999999


Q ss_pred             cccCCccccCccceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeCCCCceeEEeCCCCCCCCeEEecCCCCeEEE
Q 019965          171 DFFDKPEILGEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIV  250 (333)
Q Consensus       171 ~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~GLqV~~~~~~~~g~W~~v~~~~~~~iV  250 (333)
                      ++|.  +.+..+.+.||++||||++.. + ..+|+++|||+|+||||+||+++||||+.++    |+|++|+|.||++||
T Consensus       158 ~~f~--~~~~~~~~~lr~~~Ypp~~~~-~-~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~----g~W~~V~p~pg~~vV  229 (312)
T 3oox_A          158 DFFK--PTVQDGNSVLRLLHYPPIPKD-A-TGVRAGAHGDINTITLLLGAEEGGLEVLDRD----GQWLPINPPPGCLVI  229 (312)
T ss_dssp             TTTH--HHHTTCCCEEEEEEECCCSSC-C-C--CEEEECCCSSEEEEECCTTSCEEEECTT----SCEEECCCCSSCEEE
T ss_pred             HHHH--HHhcCCcceeeeEecCCCCCC-c-CCcCccceecCceEEEEeEcCcCceEEECCC----CcEEECCCCCCeEEE
Confidence            9999  888888899999999999864 2 3399999999999999999999999999876    679999999999999


Q ss_pred             EcchhhHHhhCCccccccceecCC-----CCCceeeEEeecCCCCceeecCCCccCCCCCCCCC-CcCHHHHHHHHHHhh
Q 019965          251 NLGDMLERWSNCVFKSTLHRVLGN-----GRERYSIAYFVEPSHDCVVECLPTCKSEKNPPKFP-PVKYGSYLSQRYKDT  324 (333)
Q Consensus       251 niGd~l~~~TnG~~ks~~HRV~~~-----~~~R~S~~~F~~p~~~~~i~p~~~~~~~~~~~~~~-~~~~~e~~~~~~~~~  324 (333)
                      ||||+||+||||+|||++|||+++     +.+|||++||++|+.|++|.|+++|+++++|++|+ ++|++||+..|+++.
T Consensus       230 NiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          230 NIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             EECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             EhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence            999999999999999999999974     45799999999999999999999999999999999 999999999999854
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 333
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-58
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-56
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 4e-55
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-50
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  190 bits (483), Expect = 1e-58
 Identities = 73/309 (23%), Positives = 128/309 (41%), Gaps = 25/309 (8%)

Query: 20  IDLSSPD------IHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNE 73
           IDL + +          +  LK+A LD G  ++INHGI  + M+ V    + FF+L + E
Sbjct: 49  IDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEE 108

Query: 74  KIKVLRNEKHRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPA 133
           K K   ++          +L +  +         +++     + D               
Sbjct: 109 KEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDL-----------SIW 157

Query: 134 PDILPGWRETMDRFHQEALEVAKVVARIIALALDLNADFFDKPEILGEPIATLRLLHYEG 193
           P     + E    + +    +A  V + +++ L L  D  +K     E +  L++     
Sbjct: 158 PKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEEL-LLQMKINYY 216

Query: 194 QTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWEYVPPLKGAFIVNLG 253
                 +   G  AH+D   +T +  + V GLQ+  +       W     +  + ++++G
Sbjct: 217 PKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGK-----WVTAKCVPDSIVMHIG 271

Query: 254 DMLERWSNCVFKSTLHRVLGN-GRERYSIAYFVEPSHDCVV-ECLPTCKSEKNPPKFPPV 311
           D LE  SN  +KS LHR L N  + R S A F EP  D +V + LP   S ++P KFPP 
Sbjct: 272 DTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPR 331

Query: 312 KYGSYLSQR 320
            +  ++  +
Sbjct: 332 TFAQHIEHK 340
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query333
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.94
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-67  Score=494.19  Aligned_cols=288  Identities=26%  Similarity=0.418  Sum_probs=243.7

Q ss_pred             CCCCcccEEeCCC------cchHHHHHHHHHHhhhcCEEEEEccCCCHHHHHHHHHHHHHHhCCCHHHHhhhccCC---C
Q 019965           12 KAHTVLHCIDLSS------PDIHQSVSLLKQACLDCGFFYVINHGISQEFMDEVFTQSKRFFNLPLNEKIKVLRNE---K   82 (333)
Q Consensus        12 ~~~~~iPvIDl~~------~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~---~   82 (333)
                      .+..+||||||+.      ..+++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....   .
T Consensus        41 ~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~  120 (349)
T d1gp6a_          41 EDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK  120 (349)
T ss_dssp             CCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred             CCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCC
Confidence            3566899999963      235679999999999999999999999999999999999999999999999987652   3


Q ss_pred             CCcccccCcccccCCCCCCCCceEEEEecccCCCCCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 019965           83 HRGYTPLHDELLDPDTQVHGDYKEGYYIGVEVPEGDPESEKPFYGPNVWPAPDILPGWRETMDRFHQEALEVAKVVARII  162 (333)
Q Consensus        83 ~~GY~~~~~e~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~~~f~~~~~~y~~~~~~l~~~ll~~l  162 (333)
                      +.||.....+..    ....++.+.+..... +.       .....|.||..  .+.|++.+++|+++|.+++.+|++++
T Consensus       121 ~~~~g~~~~~~~----~~~~~~~~~~~~~~~-~~-------~~~~~n~wp~~--~~~f~e~~~~~~~~~~~la~~ll~~l  186 (349)
T d1gp6a_         121 IQGYGSKLANNA----SGQLEWEDYFFHLAY-PE-------EKRDLSIWPKT--PSDYIEATSEYAKCLRLLATKVFKAL  186 (349)
T ss_dssp             CSEEECCCCCST----TCCCCSCEEEEEEEE-SG-------GGCCGGGSCCS--STTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccc----ccccchhhhhccccc-cc-------ccccccccccc--cchHHHHHHHHHHHHHHHHHhhhHHH
Confidence            344433222211    123444444433211 11       23567899988  69999999999999999999999999


Q ss_pred             HHhcCCCccccCCcccc---CccceeeeeeecCCCCCCCCCCcceeeecccCCceEEEeeCCCCceeEEeCCCCCCCCeE
Q 019965          163 ALALDLNADFFDKPEIL---GEPIATLRLLHYEGQTSDPSKGIYGAGAHSDFGLITLLATDEVLGLQICKDKDAKPQIWE  239 (333)
Q Consensus       163 ~~~Lgl~~~~~~~~~~~---~~~~~~lr~~~Yp~~~~~~~~~~~~~~~HtD~~~lTlL~~d~~~GLqV~~~~~~~~g~W~  239 (333)
                      +++||+++++|.  +.+   +...+.||++|||+++.  +...+|+++|||+|+||||+|+.++||||+..     |+|+
T Consensus       187 a~~Lgl~~~~~~--~~~~~~~~~~~~lrl~~Yp~~~~--~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~~~-----g~W~  257 (349)
T d1gp6a_         187 SVGLGLEPDRLE--KEVGGLEELLLQMKINYYPKCPQ--PELALGVEAHTDVSALTFILHNMVPGLQLFYE-----GKWV  257 (349)
T ss_dssp             HHHTTSCTTHHH--HHTTHHHHCEEEEEEEEECCCSS--TTTCCSEEEECCCSSEEEEEECSCCCEEEEET-----TEEE
T ss_pred             HHHcCCCHHHHH--HHhccccccceeeeecccccccc--hhhccccccCCCCcceEEEeccCCcceeeecC-----CceE
Confidence            999999999887  554   34678999999999876  56789999999999999999999999999765     4699


Q ss_pred             EecCCCCeEEEEcchhhHHhhCCccccccceecC-CCCCceeeEEeecCCCCcee-ecCCCccCCCCCCCCCCcCHHHHH
Q 019965          240 YVPPLKGAFIVNLGDMLERWSNCVFKSTLHRVLG-NGRERYSIAYFVEPSHDCVV-ECLPTCKSEKNPPKFPPVKYGSYL  317 (333)
Q Consensus       240 ~v~~~~~~~iVniGd~l~~~TnG~~ks~~HRV~~-~~~~R~S~~~F~~p~~~~~i-~p~~~~~~~~~~~~~~~~~~~e~~  317 (333)
                      +|+|.+|++|||+||+|++||||+|||++|||+. ++.+||||+||++|+.|++| .|+++|++++.|++|+++|++||+
T Consensus       258 ~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~  337 (349)
T d1gp6a_         258 TAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHI  337 (349)
T ss_dssp             ECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHH
T ss_pred             EccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHH
Confidence            9999999999999999999999999999999986 67899999999999999865 899999999999999999999999


Q ss_pred             HHHHH
Q 019965          318 SQRYK  322 (333)
Q Consensus       318 ~~~~~  322 (333)
                      +.|+.
T Consensus       338 ~~rl~  342 (349)
T d1gp6a_         338 EHKLF  342 (349)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99884
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure